FvH4_6g04890

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000024
Physical Location & Seq
Forward (+)
2710389 .. 2713525
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g04890.t1

Sequence Viewer

Length: 2220 bp
ATGGCCAATCTATCATTTTTGACAACCCTCGACTTACATCAGTGCGAGTTATTTGGAGACTTCCCAGTAACAATTTTCCACTTACAAAACTTGAAAAGTCTCTATGTTAGAGACAACCAAGATCTCATTGGTCATTTGCCTGAATTTAATCAAAGTAGTCGTCTCATCACACTTGATCTTCACGGAACTAGATTTTCTGGTAACTTTCCATCTTCCATAGGAAAGATTGATTCTTTGAAGCAGTTGGACGTGGCTGCATGCAATTTTTCAGAAGGCTTTGTTCCATCTTCCATAGGTAATCTGAGACAACTCGTTTATCTAGACCTTTCAGCAAACAAATTTGTAGGTCAGATTCCCGAGTCCTTTGCAAACCTTACCCAATTGACCGTCTTTCGGATTAGTACAAGTCCATTATCTGGTCCGGTCCCATCGTGGATAGGTAATTTCAGCAAGCTAGTTTACCTAGATTTTGCATTTAGTAGACTGAATGGTTCAATTCTTGCTTCATTTTCCAATCTCACGAACCTTGAGATTCTTTATCTTCAGAACAATGACCTGAGAGGTTCAGTTGAGTTTCAACAATTTCAAAACCTTCAAAATCTCTACCAACTCGATCTAGGTGTTAATAATCTGGAATTTCTCACTGGTTCCGAGATTATGAATGCAACTGTTCCACAGTTCACGCTTCTAGGATTAGCTAGATGCAATTTGACACAGTTCCCGAACTTCTTAAGATATCAAAAAAGTTTGCAGTATTTGAACCTTGATCAAAACAAAATCCATGGCCAAGTACCGAAATGGATGTGGAACATGAGCACCGGAAGTTTGAAAACTTTCAACCTTGACACTAACCTCCTTTCAGGCTTTGAGAACCTTCCAGATGTCCTTCCCTGGGTCGACTTGCGCGCTTTCGCTCTTACATCAAACATGTTTCAGGGCCCACTCCCAGTACCGGCAGCATCCACCATAGTCTATGGAGTTCAGAATAACAACTTTGCTGGAGAAGTTCCACCAGGAATCTGCAATATGAGTTCTCTTCTGGCCCTTGATTTGTCCAACAACAACTTTAGTGGCATGATTCCGCAGTGTTTCGGAAACTTCAGCGACCATCTTACAGTTTTGCTTCTTGGAAATAACTCGTTTCACGGCACTCTTCCCCAAAGACACACCAACAAAAGCAACTTAAGGATACTTGATGTAAGTCAAAATCAATTGCAAGGACAGCTATCGACGTCGTGGGGGAATTGTCTGGTGCTTGAGACGTTGATTCTGTCAAACAATAACTTTAGCGATGTCTTCCCCTTTTGGTTGGGGAGTCTTCCGGAGTTAAAAATTTTGGCAATGCGGCATAATGGTTTCTATGGAATGATAGCAAAGCCTGAAAACAATCAACGGTTCCCGAAGTTGCGTGTTTTGGATATGTTGTATAACAATTTCACCGGGCAGTTTCTAGCTGAGAACATCTTCACCGAGTATGGAATGAGACCAAATATAACGGTGAGCCAAAGAACATACATAGAGGCTGACATCAGCTACGAAGCTTCTTATGGTGTCACCACTGTGTCTTATGGTTCCACGATTACAATAACCAGTAAAGGTGTTGATAGATACTATTCAAAGATTCAAGAAGCCTTTGCAGTCATTGATATCTCATGCAACAAATTTGAAGGGAAGATCGATGAATGGATTGGGAATCTAAAGGGGCTTCGCTCACTGAATGTTTCCAACAACCTTCTTACAGGAAGGATCCCATCATCTTTGGGGAATTTAAATGATCTCGAATCACTGGATCTATCGAATAACAAGCTCTCGGGAGAGATCCCCCAGCAACTGGTTCAATTGACATTCCTTGCAAAGTTCAATGTCTCTCACAACAATCTCACAGGTCTCATACCAAGTGGAACCCAACTCAGGGGGTTTACTCTCTCGTCTTATGAAGGAAACTCTGGGCTGTGTGGAGATCCATTGCCAAGGAAATGCGGGAAGCCTAATACCCCGGCTCAAGTGCCACCTTCCAGCACAGAAGACAACAACAGTTCAGGGTCTGGAATTGAATTTGATTGGAAATTTGTGTTGTCTGGATTTGGAAGTGGATTGGTGGTTGGAGTGGTACTTGCGGACATGGCAATCACGCGGAGGCCTGAGATATTTCTTGAGATGGTTGGAAGATTAGTCAGACTAATGAAAATGATCACAAGGTGCAAGAGGTTAGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

740

Amino Acids

82.17

Weight (kDa)

6.39

Isoelectric Point (pI)

33.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 55 - 276 8.9e-15 Leucine-rich repeat region
LRR_8 PF13855 547 - 603 3.8e-08 Leucine rich repeat
LRR_14 PF23598 547 - 625 1.9e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1235
AccB7I CCANNNNNTGG 2 cut(s) 416, 1831
AccI GTMKAC 2 cut(s) 481, 897
AccII CGCG 2 cut(s) 906, 2134
AccIII TCCGGA 1 cut(s) 1321
AciI CCGC 5 cut(s) 1082, 1345, 1980, 2117, 2134
AclWI GGATC 5 cut(s) 1741, 1754, 1797, 1813, 1955
AcoI YGGCCR 2 cut(s) 3, 784
AcsI RAATTY 8 cut(s) 143, 338, 635, 1332, 1661, 1765, 2054, 2066
AcuI CTGAAG 2 cut(s) 527, 1084
AcyI GRCGYC 1 cut(s) 1232
AdeI CACNNNGTG 1 cut(s) 2199
AfaI GTAC 4 cut(s) 403, 792, 951, 2112
AfiI CCNNNNNNNGG 7 cut(s) 393, 416, 892, 952, 1831, 1911, 1912
AflII CTTAAG 2 cut(s) 730, 1183
AflIII ACRYGT 1 cut(s) 927
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 2 cut(s) 890, 1012
AleI CACNNNNGTG 1 cut(s) 1559
AluBI AGCT 7 cut(s) 454, 698, 1225, 1454, 1533, 1541, 1807
AluI AGCT 7 cut(s) 454, 698, 1225, 1454, 1533, 1541, 1807
Alw21I GWGCWC 1 cut(s) 818
Alw26I GTCTC 9 cut(s) 51, 104, 105, 167, 298, 1253, 1477, 1870, 1892
AlwI GGATC 5 cut(s) 1741, 1754, 1797, 1813, 1955
AlwNI CAGNNNCTG 2 cut(s) 1831, 2045
Ama87I CYCGRG 2 cut(s) 356, 1810
Aor13HI TCCGGA 1 cut(s) 1321
AoxI GGCC 5 cut(s) 3, 784, 937, 1041, 2138
ApaI GGGCCC 1 cut(s) 941
ApeKI GCWGC 2 cut(s) 254, 956
ApoI RAATTY 8 cut(s) 143, 338, 635, 1332, 1661, 1765, 2054, 2066
ArsI GACNNNNNNTTYG 2 cut(s) 145, 177
Asp700I GAANNNNTTC 2 cut(s) 833, 1463
AspLEI GCGC 2 cut(s) 906, 908
AspS9I GGNCC 5 cut(s) 419, 424, 937, 938, 1042
AsuC2I CCSGG 2 cut(s) 1441, 1997
AsuHPI GGTGA 4 cut(s) 1429, 1459, 1510, 1546
AvaI CYCGRG 2 cut(s) 356, 1810
AvaII GGWCC 2 cut(s) 419, 424
BaeGI GKGCMC 1 cut(s) 941
BalI TGGCCA 2 cut(s) 5, 786
BamHI GGATCC 1 cut(s) 1746
BanII GRGCYC 1 cut(s) 941
BbsI GAAGAC 3 cut(s) 1288, 1310, 2031
Bbv12I GWGCWC 1 cut(s) 818
BbvI GCAGC 2 cut(s) 241, 968
BccI CCATC 6 cut(s) 217, 292, 436, 1116, 1759, 2152
BceAI ACGGC 1 cut(s) 1162
BcgI CGANNNNNNTGC 2 cut(s) 347, 381
BciT130I CCWGG 2 cut(s) 892, 1014
BciVI GTATCC 1 cut(s) 1182
BclI TGATCA 2 cut(s) 766, 2190
BcnI CCSGG 2 cut(s) 1441, 1997
BcoDI GTCTC 9 cut(s) 51, 104, 105, 167, 298, 1253, 1477, 1870, 1892
BfaI CTAG 8 cut(s) 189, 320, 455, 464, 617, 689, 699, 1451
BfrI CTTAAG 2 cut(s) 730, 1183
BfuI GTATCC 1 cut(s) 1182
BglII AGATCT 1 cut(s) 121
BisI GCNGC 3 cut(s) 255, 957, 1346
BlsI GCNGC 3 cut(s) 256, 958, 1347
Bme1390I CCNGG 4 cut(s) 892, 1014, 1441, 1997
Bme18I GGWCC 2 cut(s) 419, 424
BmeT110I CYCGRG 2 cut(s) 356, 1810
BmgBI CACGTC 1 cut(s) 250
BmgT120I GGNCC 5 cut(s) 419, 424, 937, 938, 1042
BmiI GGNNCC 7 cut(s) 426, 649, 939, 1397, 1573, 1748, 1903
BmrFI CCNGG 4 cut(s) 892, 1014, 1441, 1997
BmrI ACTGGG 2 cut(s) 59, 941
BmsI GCATC 2 cut(s) 692, 968
BmuI ACTGGG 2 cut(s) 59, 941
BpiI GAAGAC 3 cut(s) 1288, 1310, 2031
BpmI CTGGAG 1 cut(s) 1020
BpuEI CTTGAG 4 cut(s) 548, 1277, 1986, 2174
BpuMI CCSGG 2 cut(s) 1441, 1997
Bsa29I ATCGAT 1 cut(s) 1677
BsaHI GRCGYC 1 cut(s) 1232
BsaI GGTCTC 2 cut(s) 1477, 1892
BsaJI CCNNGG 5 cut(s) 781, 890, 891, 1970, 1995
BsaWI WCCGGW 3 cut(s) 421, 818, 1321
Bsc4I CCNNNNNNNGG 7 cut(s) 393, 416, 892, 952, 1831, 1911, 1912
Bse118I RCCGGY 1 cut(s) 952
Bse1I ACTGG 6 cut(s) 65, 649, 947, 1590, 1791, 1836
Bse3DI GCAATG 2 cut(s) 1347, 1964
BseAI TCCGGA 1 cut(s) 1321
BseBI CCWGG 2 cut(s) 892, 1014
BseCI ATCGAT 1 cut(s) 1677
BseDI CCNNGG 5 cut(s) 781, 890, 891, 1970, 1995
BseGI GGATG 2 cut(s) 807, 959
BseLI CCNNNNNNNGG 7 cut(s) 393, 416, 892, 952, 1831, 1911, 1912
BseMI GCAATG 2 cut(s) 1347, 1964
BseMII CTCAG 5 cut(s) 293, 548, 1446, 1924, 2133
BseNI ACTGG 6 cut(s) 65, 649, 947, 1590, 1791, 1836
BsePI GCGCGC 1 cut(s) 904
BseSI GKGCMC 1 cut(s) 941
BseXI GCAGC 2 cut(s) 241, 968
BseYI CCCAGC 1 cut(s) 1824
Bsh1236I CGCG 2 cut(s) 906, 2134
BshFI GGCC 5 cut(s) 5, 786, 939, 1043, 2140
BshVI ATCGAT 1 cut(s) 1677
BsiHKAI GWGCWC 1 cut(s) 818
BsiHKCI CYCGRG 2 cut(s) 356, 1810
BsiSI CCGG 6 cut(s) 422, 819, 953, 1322, 1440, 1997
BslFI GGGAC 1 cut(s) 410
BslI CCNNNNNNNGG 7 cut(s) 393, 416, 892, 952, 1831, 1911, 1912
BsmAI GTCTC 9 cut(s) 51, 104, 105, 167, 298, 1253, 1477, 1870, 1892
BsmBI CGTCTC 2 cut(s) 167, 1253
BsmFI GGGAC 1 cut(s) 410
BsmI GAATGC 1 cut(s) 667
BsnI GGCC 5 cut(s) 5, 786, 939, 1043, 2140
Bso31I GGTCTC 2 cut(s) 1477, 1892
BsoBI CYCGRG 2 cut(s) 356, 1810
Bsp120I GGGCCC 1 cut(s) 937
Bsp1286I GDGCHC 2 cut(s) 818, 941
Bsp13I TCCGGA 1 cut(s) 1321
Bsp19I CCATGG 1 cut(s) 781
BspACI CCGC 5 cut(s) 1082, 1345, 1980, 2117, 2134
BspANI GGCC 5 cut(s) 5, 786, 939, 1043, 2140
BspCNI CTCAG 5 cut(s) 294, 549, 1447, 1923, 2134
BspDI ATCGAT 1 cut(s) 1677
BspEI TCCGGA 1 cut(s) 1321
BspFNI CGCG 2 cut(s) 906, 2134
BspLI GGNNCC 7 cut(s) 426, 649, 939, 1397, 1573, 1748, 1903
BspPI GGATC 5 cut(s) 1741, 1754, 1797, 1813, 1955
BspTI CTTAAG 2 cut(s) 730, 1183
BspTNI GGTCTC 2 cut(s) 1477, 1892
BsrDI GCAATG 2 cut(s) 1347, 1964
BsrFI RCCGGY 1 cut(s) 952
BsrI ACTGG 6 cut(s) 65, 649, 947, 1590, 1791, 1836
BssAI RCCGGY 1 cut(s) 952
BssECI CCNNGG 5 cut(s) 781, 890, 891, 1970, 1995
BssHII GCGCGC 1 cut(s) 904
BssNI GRCGYC 1 cut(s) 1232
BssT1I CCWWGG 2 cut(s) 781, 1970
Bst2UI CCWGG 2 cut(s) 892, 1014
Bst4CI ACNGT 9 cut(s) 388, 670, 678, 717, 1117, 1395, 1498, 1561, 2036
Bst6I CTCTTC 2 cut(s) 1041, 1158
BstACI GRCGYC 1 cut(s) 1232
BstAFI CTTAAG 2 cut(s) 730, 1183
BstC8I GCNNGC 3 cut(s) 259, 452, 906
BstDEI CTNAG 5 cut(s) 302, 557, 1455, 1910, 2142
BstDSI CCRYGG 1 cut(s) 781
BstF5I GGATG 2 cut(s) 807, 959
BstFNI CGCG 2 cut(s) 906, 2134
BstHHI GCGC 2 cut(s) 906, 908
BstMAI GTCTC 9 cut(s) 51, 104, 105, 167, 298, 1253, 1477, 1870, 1892
BstMWI GCNNNNNNNGC 2 cut(s) 1222, 2123
BstNI CCWGG 2 cut(s) 892, 1014
BstNSI RCATGY 2 cut(s) 261, 931
BstSCI CCNGG 4 cut(s) 890, 1012, 1439, 1995
BstSLI GKGCMC 1 cut(s) 941
BstUI CGCG 2 cut(s) 906, 2134
BstV1I GCAGC 2 cut(s) 241, 968
BstV2I GAAGAC 3 cut(s) 1288, 1310, 2031
BstX2I RGATCY 5 cut(s) 121, 1746, 1789, 1818, 1960
BstYI RGATCY 5 cut(s) 121, 1746, 1789, 1818, 1960
Bsu15I ATCGAT 1 cut(s) 1677
BsuI GTATCC 1 cut(s) 1182
BsuRI GGCC 5 cut(s) 5, 786, 939, 1043, 2140
BsuTUI ATCGAT 1 cut(s) 1677
BtgI CCRYGG 1 cut(s) 781
BtgZI GCGATG 1 cut(s) 1305
BtrI CACGTC 1 cut(s) 250
BtsCI GGATG 2 cut(s) 807, 959
BtsI GCAGTG 1 cut(s) 1091
BtsIMutI CAGTG 6 cut(s) 47, 642, 1091, 1557, 1712, 1784
Cac8I GCNNGC 3 cut(s) 259, 452, 906
CaiI CAGNNNCTG 2 cut(s) 1831, 2045
CfoI GCGC 2 cut(s) 906, 908
Cfr10I RCCGGY 1 cut(s) 952
Cfr13I GGNCC 5 cut(s) 419, 424, 937, 938, 1042
ClaI ATCGAT 1 cut(s) 1677
Csp6I GTAC 4 cut(s) 402, 791, 950, 2111
CspCI CAANNNNNGTGG 2 cut(s) 1051, 1086
CviAII CATG 7 cut(s) 258, 782, 811, 928, 1075, 1653, 2122
CviQI GTAC 4 cut(s) 402, 791, 950, 2111
DdeI CTNAG 5 cut(s) 302, 557, 1455, 1910, 2142
DraI TTTAAA 1 cut(s) 1770
DraIII CACNNNGTG 1 cut(s) 2199
EaeI YGGCCR 2 cut(s) 3, 784
Eam1104I CTCTTC 2 cut(s) 1041, 1158
EarI CTCTTC 2 cut(s) 1041, 1158
Eco130I CCWWGG 2 cut(s) 781, 1970
Eco147I AGGCCT 1 cut(s) 2140
Eco24I GRGCYC 1 cut(s) 941
Eco31I GGTCTC 2 cut(s) 1477, 1892
Eco32I GATATC 2 cut(s) 737, 1648
Eco47I GGWCC 2 cut(s) 419, 424
Eco57I CTGAAG 2 cut(s) 527, 1084
Eco88I CYCGRG 2 cut(s) 356, 1810
EcoO109I RGGNCCY 1 cut(s) 937
EcoRII CCWGG 2 cut(s) 890, 1012
EcoRV GATATC 2 cut(s) 737, 1648
EcoT14I CCWWGG 2 cut(s) 781, 1970
EcoT38I GRGCYC 1 cut(s) 941
ErhI CCWWGG 2 cut(s) 781, 1970
Esp3I CGTCTC 2 cut(s) 167, 1253
FaeI CATG 7 cut(s) 261, 785, 814, 931, 1078, 1656, 2125
FaqI GGGAC 1 cut(s) 410
FatI CATG 7 cut(s) 257, 781, 810, 927, 1074, 1652, 2121
FauI CCCGC 1 cut(s) 1973
FbaI TGATCA 2 cut(s) 766, 2190
FblI GTMKAC 2 cut(s) 481, 897
Fnu4HI GCNGC 3 cut(s) 255, 957, 1346
FokI GGATG 2 cut(s) 814, 946
FriOI GRGCYC 1 cut(s) 941
Fsp4HI GCNGC 3 cut(s) 255, 957, 1346
FspBI CTAG 8 cut(s) 189, 320, 455, 464, 617, 689, 699, 1451
GlaI GCGC 2 cut(s) 905, 907
GluI GCNGC 3 cut(s) 255, 957, 1346
GsaI CCCAGC 1 cut(s) 1828
GsuI CTGGAG 1 cut(s) 1020
HaeIII GGCC 5 cut(s) 5, 786, 939, 1043, 2140
HapII CCGG 6 cut(s) 422, 819, 953, 1322, 1440, 1997
HhaI GCGC 2 cut(s) 906, 908
Hin1I GRCGYC 1 cut(s) 1232
Hin1II CATG 7 cut(s) 261, 785, 814, 931, 1078, 1656, 2125
Hin6I GCGC 2 cut(s) 904, 906
HinP1I GCGC 2 cut(s) 904, 906
HincII GTYRAC 1 cut(s) 898
HindII GTYRAC 1 cut(s) 898
HindIII AAGCTT 1 cut(s) 1539
HpaII CCGG 6 cut(s) 422, 819, 953, 1322, 1440, 1997
HphI GGTGA 4 cut(s) 1429, 1459, 1510, 1546
Hpy166II GTNNAC 5 cut(s) 460, 482, 681, 898, 1920
Hpy188I TCNGA 9 cut(s) 271, 303, 351, 396, 546, 652, 984, 1094, 2177
Hpy8I GTNNAC 5 cut(s) 460, 482, 681, 898, 1920
Hpy99I CGWCG 2 cut(s) 1234, 1237
HpyAV CCTTC 9 cut(s) 266, 602, 884, 896, 1661, 1737, 1742, 1931, 2022
HpyCH4III ACNGT 9 cut(s) 388, 670, 678, 717, 1117, 1395, 1498, 1561, 2036
HpyCH4IV ACGT 3 cut(s) 249, 1232, 1262
HpyF10VI GCNNNNNNNGC 2 cut(s) 1222, 2123
HpyF3I CTNAG 5 cut(s) 302, 557, 1455, 1910, 2142
HpySE526I ACGT 3 cut(s) 249, 1232, 1262
Hsp92I GRCGYC 1 cut(s) 1232
Hsp92II CATG 7 cut(s) 261, 785, 814, 931, 1078, 1656, 2125
HspAI GCGC 2 cut(s) 904, 906
Kpn2I TCCGGA 1 cut(s) 1321
Ksp22I TGATCA 2 cut(s) 766, 2190
Lsp1109I GCAGC 2 cut(s) 241, 968
LweI GCATC 2 cut(s) 692, 968
MaeI CTAG 8 cut(s) 189, 320, 455, 464, 617, 689, 699, 1451
MaeII ACGT 3 cut(s) 249, 1232, 1262
MaeIII GTNAC 3 cut(s) 67, 200, 1552
MfeI CAATTG 3 cut(s) 380, 1211, 1838
MflI RGATCY 5 cut(s) 121, 1746, 1789, 1818, 1960
MhlI GDGCHC 2 cut(s) 818, 941
MlsI TGGCCA 2 cut(s) 5, 786
MluNI TGGCCA 2 cut(s) 5, 786
MlyI GAGTC 2 cut(s) 368, 1324
MmeI TCCRAC 5 cut(s) 225, 1080, 1749, 2083, 2143
MnlI CCTC 6 cut(s) 38, 554, 863, 1513, 2130, 2199
Mox20I TGGCCA 2 cut(s) 5, 786
MroI TCCGGA 1 cut(s) 1321
MroXI GAANNNNTTC 2 cut(s) 833, 1463
MscI TGGCCA 2 cut(s) 5, 786
MseI TTAA 6 cut(s) 147, 624, 731, 1184, 1328, 1769
MslI CAYNNNNRTG 1 cut(s) 1559
Msp20I TGGCCA 2 cut(s) 5, 786
MspCI CTTAAG 2 cut(s) 730, 1183
MspI CCGG 6 cut(s) 422, 819, 953, 1322, 1440, 1997
MspR9I CCNGG 4 cut(s) 892, 1014, 1441, 1997
MunI CAATTG 3 cut(s) 380, 1211, 1838
Mva1269I GAATGC 1 cut(s) 667
MvaI CCWGG 2 cut(s) 892, 1014
MvnI CGCG 2 cut(s) 906, 2134
MwoI GCNNNNNNNGC 2 cut(s) 1222, 2123
NciI CCSGG 2 cut(s) 1441, 1997
NcoI CCATGG 1 cut(s) 781
NlaIII CATG 7 cut(s) 261, 785, 814, 931, 1078, 1656, 2125
NlaIV GGNNCC 7 cut(s) 426, 649, 939, 1397, 1573, 1748, 1903
NmuCI GTSAC 1 cut(s) 1552
NspI RCATGY 2 cut(s) 261, 931
OliI CACNNNNGTG 1 cut(s) 1559
PaeI GCATGC 1 cut(s) 261
PasI CCCWGGG 1 cut(s) 891
PauI GCGCGC 1 cut(s) 904
PceI AGGCCT 1 cut(s) 2140
PciI ACATGT 1 cut(s) 927
PctI GAATGC 1 cut(s) 667
PdmI GAANNNNTTC 2 cut(s) 833, 1463
PfeI GAWTC 9 cut(s) 230, 352, 532, 1017, 1078, 1267, 1621, 1693, 1781
PflMI CCANNNNNTGG 2 cut(s) 416, 1831
PkrI GCNGC 3 cut(s) 256, 958, 1347
PleI GAGTC 2 cut(s) 367, 1323
PpsI GAGTC 2 cut(s) 367, 1323
PscI ACATGT 1 cut(s) 927
Psp6I CCWGG 2 cut(s) 890, 1012
PspFI CCCAGC 1 cut(s) 1824
PspGI CCWGG 2 cut(s) 890, 1012
PspN4I GGNNCC 7 cut(s) 426, 649, 939, 1397, 1573, 1748, 1903
PspOMI GGGCCC 1 cut(s) 937
PspPI GGNCC 5 cut(s) 419, 424, 937, 938, 1042
PstNI CAGNNNCTG 2 cut(s) 1831, 2045
PsuI RGATCY 5 cut(s) 121, 1746, 1789, 1818, 1960
PteI GCGCGC 1 cut(s) 904
RsaI GTAC 4 cut(s) 403, 792, 951, 2112
RsaNI GTAC 4 cut(s) 402, 791, 950, 2111
RseI CAYNNNNRTG 1 cut(s) 1559
SalI GTCGAC 1 cut(s) 896
SaqAI TTAA 6 cut(s) 147, 624, 731, 1184, 1328, 1769
SatI GCNGC 3 cut(s) 255, 957, 1346
Sau96I GGNCC 5 cut(s) 419, 424, 937, 938, 1042
SchI GAGTC 2 cut(s) 368, 1324
ScrFI CCNGG 4 cut(s) 892, 1014, 1441, 1997
SduI GDGCHC 2 cut(s) 818, 941
SfaNI GCATC 2 cut(s) 692, 968
SinI GGWCC 2 cut(s) 419, 424
SmiI ATTTAAAT 1 cut(s) 1770
SmiMI CAYNNNNRTG 1 cut(s) 1559
SmlI CTYRAG 6 cut(s) 527, 730, 1183, 1256, 2001, 2153
SmoI CTYRAG 6 cut(s) 527, 730, 1183, 1256, 2001, 2153
SphI GCATGC 1 cut(s) 261
SseBI AGGCCT 1 cut(s) 2140
SsiI CCGC 5 cut(s) 1082, 1345, 1980, 2117, 2134
SspMI CTAG 8 cut(s) 189, 320, 455, 464, 617, 689, 699, 1451
StuI AGGCCT 1 cut(s) 2140
StyD4I CCNGG 4 cut(s) 890, 1012, 1439, 1995
StyI CCWWGG 2 cut(s) 781, 1970
SwaI ATTTAAAT 1 cut(s) 1770
TaaI ACNGT 9 cut(s) 388, 670, 678, 717, 1117, 1395, 1498, 1561, 2036
TaiI ACGT 3 cut(s) 252, 1235, 1265
TaqI TCGA 7 cut(s) 30, 612, 897, 1229, 1677, 1779, 1796
TatI WGTACW 1 cut(s) 401
TauI GCSGC 1 cut(s) 1348
TfiI GAWTC 9 cut(s) 230, 352, 532, 1017, 1078, 1267, 1621, 1693, 1781
Tru1I TTAA 6 cut(s) 147, 624, 731, 1184, 1328, 1769
Tru9I TTAA 6 cut(s) 147, 624, 731, 1184, 1328, 1769
TscAI CASTG 6 cut(s) 47, 649, 1091, 1564, 1719, 1791
TseFI GTSAC 1 cut(s) 1552
TseI GCWGC 2 cut(s) 254, 956
Tsp45I GTSAC 1 cut(s) 1552
TspDTI ATGAA 5 cut(s) 495, 674, 1695, 1950, 2198
TspGWI ACGGA 1 cut(s) 198
TspRI CASTG 6 cut(s) 47, 649, 1091, 1564, 1719, 1791
Van91I CCANNNNNTGG 2 cut(s) 416, 1831
Vha464I CTTAAG 2 cut(s) 730, 1183
VpaK11BI GGWCC 2 cut(s) 419, 424
XapI RAATTY 8 cut(s) 143, 338, 635, 1332, 1661, 1765, 2054, 2066
XbaI TCTAGA 1 cut(s) 319
XceI RCATGY 2 cut(s) 261, 931
XcmI CCANNNNNNNNNTGG 1 cut(s) 125
XmiI GTMKAC 2 cut(s) 481, 897
XmnI GAANNNNTTC 2 cut(s) 833, 1463
XspI CTAG 8 cut(s) 189, 320, 455, 464, 617, 689, 699, 1451
ZraI GACGTC 1 cut(s) 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.