RchiOBHm_Chr1g0346361

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000024
Physical Location & Seq
Reverse (-)
38526651 .. 38529596
2946 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57263

Sequence Viewer

Length: 2946 bp
ATGGGGTTGCCTAATACTCCCATGCTTTCAAAACCAGCAGTGCTGTTGTTACTTCATCTTTTGGTTATTGCTAACTCTGTATACTCTTTGCAGCAGCCATTTAATTGCCATGATCAAGAGAGGTCTGCCTTGCTGGAATTCAAACAAAGCATTTTTATTGATAAATCTGCTTCCGGTTCTTATGGTGCTTATCCAAAGGTTTTATCATGGAAACCAGCTGAAGGAACAAACAAGGCCTGCTGCTCATGGGACGGTGTCGAGTGTGATGAGCAAACGGGTCATGTGATTGGGCTTGATCTCAATTCCAGTTTTCTCTATGGCTCTATCAACTCCAACAGCACCCTCTTCCGGCTTACTCATCTTCAGAGATTGAACTTGGCTGATAATCACTTCAATTACTCTCGTATTCCTACCAGCATTAGGAATTTTCCAAGACTCACATATCTCGACCTCTCTTATTCTGTCTTTTCTGGTAAAGTACCATCTGAACTTTCACAGTTGTCAAAGTTGTCATTCCTTGATCTATCTCACAATCTTGACACTTCTTCTGGTAAAAGATTGCTAAAACTTGATGGATTTGTGTTCAGAAGTCTAGTTCAAAATCTAACTAGTCTAGAAAAGCTCCATCTCAGTTCCATTAACATATCTTCCACTATACCAGATTCCGTGGCAAACTTATCAAATTTGACATCGCTCCTCCTAAGCGATTGTGGGCTGTTTGGCCAATTCCCTATAAGAATTTTCGAGTTACAGAACTTGAAAGTTCTTACTGTAAAATCCAACCATGATCTCTTTGGTTATCTGCCTGAATTTAATGAAAGTAGTCATCCCAAGTCATTGAACTACATATCTGTGAATGCATGCAATTTCTCAGGGATGCTTCCATCTTCTCTTGGTAATCTTAGCCAGCTCAAGCATTTGGACCTTTCGGATAACATGTTCCATGGTCTGATCCCTGCTTCGTTGGCAAATCTTACCCAGTTGACATGGTTGTCACTCTCAAATAACAATTTCACTAGCAGTTCCTTGTTGTGGGTTTGTAAGCTAACCAAACTTACTGTTCTGTACCTTGAAAGAACCAACTTGAGTGGTTATATTCCATCTTCTTTTGGTAACCTCAAACATCTCATTTTTCTGAATCTTCTTGATAATGAAGTAAAAGGTCCAATCCCGTTTTCTTTTGGCAACCTCACCCGGCTTACCCATCTCTGTCTTGCTATTAATCAACTTAGTGGTTCAATTCCTGAATCATTGTTCAACCATATGGATCTCGAGGTCCTGTATCTACAAGAAAATGACCTACACGGTACAATCGACATTCTTAAGCTACCAAGACTCACCCGCCTAGGACTGGATGGTAACAAATTGGTATTGTTGGATGAATCCAGAAGAGTGAATGCAACTGCTCTTCCAAAATTCAAATTTTTGTCGTTGCGATCTTGTAACATAAAAGAGTTCCCAAATTTCCTAAGATACCAGCGGAGCTTGGAGTTTTTGAACCTTGGCGGTAACAAGTTGGAGGGTCAAGTACCGAAATGGATGTGGAACACAAGCACAGAGAGTTTGTTGTTCTTGGACCTTTCTTATAACTTCCTTTCAGTTTTTGGCCAACTCACTGTTGTTGCTCTTCCCTGGCGTAACCTACAAGTTTTAAGGCTTCAATTTAACATGCTACAAGGTTCACTGCCAATGCCTCCACCCAACATGATATATTATTCCATTTCAGACAACAAATTAATTGGAGAAATTTCTCCATTGTTTTGTAATCTGAGTACTCTTTCCTTCCTTGACTTGTCAAACAACAAGTTGAGTGGCATGCTTCCACAATGTCTTGGAAACTTCAGTGATAATCTACTTGTTTTAGATCTTGGAAACAATTCTTTTCATGGCATTCTTCCTCAAACATACAGCAACACAAGCAGTCTGAGGACGATTGATGTTAGTTATAACCAATTGCAGGGGAAACTGCCTGAGTCATTGGAAAATTGTGTGATGCTCGAGTCTCTTGTGCTGTCAAACAATGAATTTAATGATGTTTTCCCCTTTTGGTTAGGAACTTTGCCAGAGTTACAAATTTTGGCAATGCGGTATAATGGATTCTATGGTGTGATTGGAAAGCCTCACAAGAGTTCCCGTTTCTTAAAGTTGCGCATTTTTGATCTGTCTTACAATAACTTCACTGGTGAGTTTCCCCCTGAATACATCTTTTCTGGGAATACCATGAAGGAATTTACTCCAAACGAGGCCCAATATATGGAGACAAACACAGATTCAGGTCTTCTTGTCGGTGAAACAGTGTTCAGCTACGGTTACCCTTTCTCAATCACGATAACGAATAAAGGTGTTGACAGATACTATGAGAAGATTCAACAAGACATTGGGGTCATTGATATATCATGCAACAAATTTGAAGGGAAGATTCCTGAATTCATTGGGAACTTGAAAGGACTTCGCTTTCTTAATGTTTCCAACAACATTCTCACTGGTACCATCCCATCATCCTTGGGAAAGTTGACATTACTTGAAGCATTAGACCTTTCAAATAACAGGCTTTCTGGAGAAATCCCTCAGCAACTAAAGCAGCTTACATCCCTCGCATATTTCAACATCTCTCACAACAATCTTACAGGTTCCATACCGCAAGGGCGCCAATTTAATACATTTGAAAATACTTCATTTGAGGGAAACCCAGGATTGTGTGGAGAACCATTGCCAAAGAAATGTGGAGATGCTAAGACTCCAACTCCACTGCCACCCTCAAGCATAGATGGAGTTGATTTTGATTGGAAATTTGCATTAGCGGGATTTGGAAGTGGGTTGTTGGTGGGAGTGGTACTTGCAGACATCACCATCACTAGGAAGCGTGAGTTGTTTCTTGAGATAGTTGGAGTATTAATCAGGCTAATCAAAAGGATCAAAAGGGAGAGGTCGGGATGCAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

981

Amino Acids

109.72

Weight (kDa)

7.24

Isoelectric Point (pI)

34.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 89 1.1e-06 Leucine rich repeat N-terminal domain
LRR_8 PF13855 120 - 178 4.9e-06 Leucine rich repeat
LRR_8 PF13855 279 - 338 2.2e-08 Leucine rich repeat
LRR_8 PF13855 592 - 652 7e-06 Leucine rich repeat
LRR_8 PF13855 617 - 675 8.3e-08 Leucine rich repeat
LRR_8 PF13855 796 - 851 3.4e-06 Leucine rich repeat
LRR_8 PF13855 816 - 875 2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1587, 1947
AasI GACNNNNNNGTC 2 cut(s) 991, 2381
Acc16I TGCGCA 1 cut(s) 2150
Acc65I GGTACC 1 cut(s) 2486
AccB1I GGYRCC 2 cut(s) 2486, 2646
AccB7I CCANNNNNTGG 1 cut(s) 2254
AccI GTMKAC 1 cut(s) 81
AciI CCGC 6 cut(s) 1342, 1480, 1506, 2086, 2639, 2801
AclWI GGATC 3 cut(s) 946, 1275, 2921
AcoI YGGCCR 2 cut(s) 721, 1606
AcuI CTGAAG 3 cut(s) 240, 347, 1825
AcyI GRCGYC 1 cut(s) 2647
AfaI GTAC 7 cut(s) 480, 1067, 1309, 1530, 1774, 2488, 2835
AfiI CCNNNNNNNGG 8 cut(s) 221, 348, 420, 1032, 1351, 1957, 2254, 2856
AflII CTTAAG 1 cut(s) 1322
AflIII ACRYGT 1 cut(s) 936
AhlI ACTAGT 1 cut(s) 608
AjnI CCWGG 2 cut(s) 1631, 2689
AjuI GAANNNNNNNTTGG 2 cut(s) 1159, 1191
AloI GAACNNNNNNTCC 2 cut(s) 923, 955
AluBI AGCT 8 cut(s) 218, 622, 910, 1045, 1327, 1485, 2304, 2584
AluI AGCT 8 cut(s) 218, 622, 910, 1045, 1327, 1485, 2304, 2584
Alw26I GTCTC 2 cut(s) 2007, 2252
AlwI GGATC 3 cut(s) 946, 1275, 2921
Ama87I CYCGRG 2 cut(s) 1271, 1997
AoxI GGCC 4 cut(s) 234, 721, 1606, 2244
ApeKI GCWGC 4 cut(s) 91, 94, 240, 2581
AseI ATTAAT 3 cut(s) 1221, 1736, 2894
Asp700I GAANNNNTTC 1 cut(s) 1876
Asp718I GGTACC 1 cut(s) 2486
AspA2I CCTAGG 1 cut(s) 1345
AspLEI GCGC 2 cut(s) 2151, 2649
AspS9I GGNCC 5 cut(s) 922, 1163, 1276, 1576, 2245
AsuC2I CCSGG 1 cut(s) 1195
AsuHPI GGTGA 5 cut(s) 1183, 1330, 2195, 2300, 2839
AvaI CYCGRG 2 cut(s) 1271, 1997
AvaII GGWCC 4 cut(s) 922, 1163, 1276, 1576
AvrII CCTAGG 1 cut(s) 1345
BalI TGGCCA 2 cut(s) 723, 1608
BanI GGYRCC 2 cut(s) 2486, 2646
BbsI GAAGAC 1 cut(s) 2270
BbvCI CCTCAGC 1 cut(s) 2568
BbvI GCAGC 4 cut(s) 103, 106, 227, 2593
BciT130I CCWGG 2 cut(s) 1633, 2691
BclI TGATCA 1 cut(s) 112
BcnI CCSGG 1 cut(s) 1195
BcoDI GTCTC 2 cut(s) 2007, 2252
BcuI ACTAGT 1 cut(s) 608
BfaI CTAG 6 cut(s) 593, 609, 614, 1017, 1346, 2856
BfoI RGCGCY 1 cut(s) 2650
BfrI CTTAAG 1 cut(s) 1322
BglII AGATCT 1 cut(s) 1864
BisI GCNGC 4 cut(s) 92, 95, 241, 2582
BlnI CCTAGG 1 cut(s) 1345
BlsI GCNGC 4 cut(s) 93, 96, 242, 2583
BmcAI AGTACT 1 cut(s) 1774
Bme1390I CCNGG 3 cut(s) 1195, 1633, 2691
Bme18I GGWCC 4 cut(s) 922, 1163, 1276, 1576
BmeT110I CYCGRG 2 cut(s) 1271, 1997
BmgT120I GGNCC 5 cut(s) 922, 1163, 1276, 1576, 2245
BmiI GGNNCC 3 cut(s) 2488, 2632, 2648
BmrFI CCNGG 3 cut(s) 1195, 1633, 2691
BmrI ACTGGG 1 cut(s) 973
BmsI GCATC 4 cut(s) 867, 1983, 2719, 2924
BmuI ACTGGG 1 cut(s) 973
BpiI GAAGAC 1 cut(s) 2270
BpmI CTGGAG 1 cut(s) 2577
Bpu10I CCTNAGC 2 cut(s) 701, 2568
BpuEI CTTGAG 4 cut(s) 896, 1105, 2743, 2897
BpuMI CCSGG 1 cut(s) 1195
BsaHI GRCGYC 1 cut(s) 2647
BsaJI CCNNGG 7 cut(s) 666, 943, 1345, 1501, 1631, 2502, 2689
BsaWI WCCGGW 1 cut(s) 173
BsaXI ACNNNNNCTCC 2 cut(s) 2728, 2758
Bsc4I CCNNNNNNNGG 8 cut(s) 221, 348, 420, 1032, 1351, 1957, 2254, 2856
Bse1I ACTGG 5 cut(s) 306, 979, 1356, 2185, 2488
Bse3DI GCAATG 2 cut(s) 2088, 2708
BseBI CCWGG 2 cut(s) 1633, 2691
BseDI CCNNGG 7 cut(s) 666, 943, 1345, 1501, 1631, 2502, 2689
BseGI GGATG 9 cut(s) 826, 882, 1360, 1384, 1545, 2490, 2498, 2588, 2939
BseLI CCNNNNNNNGG 8 cut(s) 221, 348, 420, 1032, 1351, 1957, 2254, 2856
BseMI GCAATG 2 cut(s) 2088, 2708
BseMII CTCAG 6 cut(s) 643, 885, 1760, 1916, 1962, 2582
BseNI ACTGG 5 cut(s) 306, 979, 1356, 2185, 2488
BseRI GAGGAG 1 cut(s) 686
BseXI GCAGC 4 cut(s) 103, 106, 227, 2593
BshFI GGCC 4 cut(s) 236, 723, 1608, 2246
BshNI GGYRCC 2 cut(s) 2486, 2646
BsiHKCI CYCGRG 2 cut(s) 1271, 1997
BsiSI CCGG 3 cut(s) 174, 349, 1195
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 8 cut(s) 221, 348, 420, 1032, 1351, 1957, 2254, 2856
BsmAI GTCTC 2 cut(s) 2007, 2252
BsmFI GGGAC 1 cut(s) 263
BsmI GAATGC 3 cut(s) 862, 1402, 1890
BsnI GGCC 4 cut(s) 236, 723, 1608, 2246
BsoBI CYCGRG 2 cut(s) 1271, 1997
Bsp19I CCATGG 1 cut(s) 943
BspACI CCGC 6 cut(s) 1342, 1480, 1506, 2086, 2639, 2801
BspANI GGCC 4 cut(s) 236, 723, 1608, 2246
BspCNI CTCAG 6 cut(s) 642, 884, 1761, 1917, 1963, 2581
BspLI GGNNCC 3 cut(s) 2488, 2632, 2648
BspPI GGATC 3 cut(s) 946, 1275, 2921
BspQI GCTCTTC 2 cut(s) 1413, 1632
BspT107I GGYRCC 2 cut(s) 2486, 2646
BspTI CTTAAG 1 cut(s) 1322
BsrDI GCAATG 2 cut(s) 2088, 2708
BsrI ACTGG 5 cut(s) 306, 979, 1356, 2185, 2488
BssECI CCNNGG 7 cut(s) 666, 943, 1345, 1501, 1631, 2502, 2689
BssNAI GTATAC 1 cut(s) 82
BssNI GRCGYC 1 cut(s) 2647
BssT1I CCWWGG 4 cut(s) 943, 1345, 1501, 2502
Bst1107I GTATAC 1 cut(s) 82
Bst2UI CCWGG 2 cut(s) 1633, 2691
Bst4CI ACNGT 8 cut(s) 254, 498, 772, 1060, 1307, 1618, 2296, 2309
Bst6I CTCTTC 4 cut(s) 350, 1384, 1413, 1632
BstACI GRCGYC 1 cut(s) 2647
BstAFI CTTAAG 1 cut(s) 1322
BstC8I GCNNGC 4 cut(s) 238, 862, 908, 1817
BstDSI CCRYGG 2 cut(s) 666, 943
BstEII GGTNACC 2 cut(s) 1112, 2309
BstF5I GGATG 9 cut(s) 826, 882, 1360, 1384, 1545, 2490, 2498, 2588, 2939
BstH2I RGCGCY 1 cut(s) 2650
BstHHI GCGC 2 cut(s) 2151, 2649
BstMAI GTCTC 2 cut(s) 2007, 2252
BstMWI GCNNNNNNNGC 3 cut(s) 965, 1917, 2578
BstNI CCWGG 2 cut(s) 1633, 2691
BstNSI RCATGY 4 cut(s) 864, 940, 1672, 1819
BstPI GGTNACC 2 cut(s) 1112, 2309
BstSCI CCNGG 3 cut(s) 1193, 1631, 2689
BstV1I GCAGC 4 cut(s) 103, 106, 227, 2593
BstV2I GAAGAC 1 cut(s) 2270
BstX2I RGATCY 2 cut(s) 1267, 1864
BstYI RGATCY 2 cut(s) 1267, 1864
BstZ17I GTATAC 1 cut(s) 82
BsuRI GGCC 4 cut(s) 236, 723, 1608, 2246
BtgI CCRYGG 2 cut(s) 666, 943
BtgZI GCGATG 1 cut(s) 675
BtsCI GGATG 9 cut(s) 826, 882, 1360, 1384, 1545, 2490, 2498, 2588, 2939
BtsI GCAGTG 3 cut(s) 45, 1682, 2747
BtsIMutI CAGTG 8 cut(s) 45, 1614, 1682, 1849, 2178, 2301, 2481, 2747
Cac8I GCNNGC 4 cut(s) 238, 862, 908, 1817
CfoI GCGC 2 cut(s) 2151, 2649
Cfr13I GGNCC 5 cut(s) 922, 1163, 1276, 1576, 2245
Csp6I GTAC 7 cut(s) 479, 1066, 1308, 1529, 1773, 2487, 2834
CspCI CAANNNNNGTGG 4 cut(s) 1069, 1104, 1792, 1827
CviQI GTAC 7 cut(s) 479, 1066, 1308, 1529, 1773, 2487, 2834
DinI GGCGCC 1 cut(s) 2648
DrdI GACNNNNNNGTC 2 cut(s) 991, 2381
DseDI GACNNNNNNGTC 2 cut(s) 991, 2381
EaeI YGGCCR 2 cut(s) 721, 1606
Eam1104I CTCTTC 4 cut(s) 350, 1384, 1413, 1632
EarI CTCTTC 4 cut(s) 350, 1384, 1413, 1632
Eco130I CCWWGG 4 cut(s) 943, 1345, 1501, 2502
Eco147I AGGCCT 1 cut(s) 236
Eco47I GGWCC 4 cut(s) 922, 1163, 1276, 1576
Eco57I CTGAAG 3 cut(s) 240, 347, 1825
Eco88I CYCGRG 2 cut(s) 1271, 1997
Eco91I GGTNACC 2 cut(s) 1112, 2309
EcoO109I RGGNCCY 1 cut(s) 1276
EcoO65I GGTNACC 2 cut(s) 1112, 2309
EcoRI GAATTC 2 cut(s) 137, 2426
EcoRII CCWGG 2 cut(s) 1631, 2689
EcoT14I CCWWGG 4 cut(s) 943, 1345, 1501, 2502
EcoT22I ATGCAT 1 cut(s) 862
EgeI GGCGCC 1 cut(s) 2648
EheI GGCGCC 1 cut(s) 2648
ErhI CCWWGG 4 cut(s) 943, 1345, 1501, 2502
FaqI GGGAC 1 cut(s) 263
FauI CCCGC 2 cut(s) 1349, 2794
FauNDI CATATG 1 cut(s) 1263
FbaI TGATCA 1 cut(s) 112
FblI GTMKAC 1 cut(s) 81
Fnu4HI GCNGC 4 cut(s) 92, 95, 241, 2582
FokI GGATG 8 cut(s) 813, 889, 1367, 1391, 1552, 2477, 2485, 2575
Fsp4HI GCNGC 4 cut(s) 92, 95, 241, 2582
FspBI CTAG 6 cut(s) 593, 609, 614, 1017, 1346, 2856
FspI TGCGCA 1 cut(s) 2150
GlaI GCGC 2 cut(s) 2150, 2648
GluI GCNGC 4 cut(s) 92, 95, 241, 2582
GsuI CTGGAG 1 cut(s) 2577
HaeII RGCGCY 1 cut(s) 2650
HaeIII GGCC 4 cut(s) 236, 723, 1608, 2246
HapII CCGG 3 cut(s) 174, 349, 1195
HhaI GCGC 2 cut(s) 2151, 2649
Hin1I GRCGYC 1 cut(s) 2647
Hin6I GCGC 2 cut(s) 2149, 2647
HinP1I GCGC 2 cut(s) 2149, 2647
HincII GTYRAC 3 cut(s) 984, 2347, 2514
HindII GTYRAC 3 cut(s) 984, 2347, 2514
HpaII CCGG 3 cut(s) 174, 349, 1195
HphI GGTGA 5 cut(s) 1183, 1330, 2195, 2300, 2839
Hpy166II GTNNAC 5 cut(s) 82, 984, 1682, 2347, 2514
Hpy188I TCNGA 9 cut(s) 366, 487, 587, 931, 951, 1137, 1726, 1770, 1926
Hpy8I GTNNAC 5 cut(s) 82, 984, 1682, 2347, 2514
HpyAV CCTTC 4 cut(s) 215, 1792, 2218, 2405
HpyCH4III ACNGT 8 cut(s) 254, 498, 772, 1060, 1307, 1618, 2296, 2309
HpyCH4V TGCA 9 cut(s) 91, 860, 864, 1400, 1957, 2400, 2795, 2840, 2937
HpyF10VI GCNNNNNNNGC 3 cut(s) 965, 1917, 2578
Hsp92I GRCGYC 1 cut(s) 2647
HspAI GCGC 2 cut(s) 2149, 2647
KasI GGCGCC 1 cut(s) 2646
KpnI GGTACC 1 cut(s) 2490
Ksp22I TGATCA 1 cut(s) 112
LguI GCTCTTC 2 cut(s) 1413, 1632
LmnI GCTCC 3 cut(s) 627, 699, 1482
Lsp1109I GCAGC 4 cut(s) 103, 106, 227, 2593
LweI GCATC 4 cut(s) 867, 1983, 2719, 2924
MaeI CTAG 6 cut(s) 593, 609, 614, 1017, 1346, 2856
MfeI CAATTG 1 cut(s) 1952
MflI RGATCY 2 cut(s) 1267, 1864
MlsI TGGCCA 2 cut(s) 723, 1608
MluNI TGGCCA 2 cut(s) 723, 1608
Mly113I GGCGCC 1 cut(s) 2647
MlyI GAGTC 5 cut(s) 429, 1329, 1982, 2009, 2731
MmeI TCCRAC 7 cut(s) 357, 804, 1356, 1497, 2493, 2765, 2866
Mox20I TGGCCA 2 cut(s) 723, 1608
Mph1103I ATGCAT 1 cut(s) 862
MroXI GAANNNNTTC 1 cut(s) 1876
MscI TGGCCA 2 cut(s) 723, 1608
MslI CAYNNNNRTG 1 cut(s) 851
Msp20I TGGCCA 2 cut(s) 723, 1608
MspA1I CMGCKG 2 cut(s) 218, 1480
MspCI CTTAAG 1 cut(s) 1322
MspI CCGG 3 cut(s) 174, 349, 1195
MspR9I CCNGG 3 cut(s) 1195, 1633, 2691
MunI CAATTG 1 cut(s) 1952
Mva1269I GAATGC 3 cut(s) 862, 1402, 1890
MvaI CCWGG 2 cut(s) 1633, 2691
MwoI GCNNNNNNNGC 3 cut(s) 965, 1917, 2578
NarI GGCGCC 1 cut(s) 2647
NciI CCSGG 1 cut(s) 1195
NcoI CCATGG 1 cut(s) 943
NdeI CATATG 1 cut(s) 1263
NlaIV GGNNCC 3 cut(s) 2488, 2632, 2648
NmuCI GTSAC 1 cut(s) 993
NsbI TGCGCA 1 cut(s) 2150
NsiI ATGCAT 1 cut(s) 862
NspI RCATGY 4 cut(s) 864, 940, 1672, 1819
PaeI GCATGC 2 cut(s) 864, 1819
PaeR7I CTCGAG 2 cut(s) 1271, 1997
PceI AGGCCT 1 cut(s) 236
PciI ACATGT 1 cut(s) 936
PciSI GCTCTTC 2 cut(s) 1413, 1632
PcsI WCGNNNNNNNCGW 1 cut(s) 1311
PctI GAATGC 3 cut(s) 862, 1402, 1890
PdmI GAANNNNTTC 1 cut(s) 1876
PfeI GAWTC 8 cut(s) 662, 1138, 1247, 1382, 2097, 2270, 2365, 2419
PflFI GACNNNGTC 1 cut(s) 254
PflMI CCANNNNNTGG 1 cut(s) 2254
PkrI GCNGC 4 cut(s) 93, 96, 242, 2583
PleI GAGTC 5 cut(s) 429, 1329, 1981, 2008, 2731
PluTI GGCGCC 1 cut(s) 2650
PpsI GAGTC 5 cut(s) 429, 1329, 1981, 2008, 2731
PpuMI RGGWCCY 1 cut(s) 1276
PscI ACATGT 1 cut(s) 936
PshBI ATTAAT 3 cut(s) 1221, 1736, 2894
PsiI TTATAA 2 cut(s) 1587, 1947
Psp5II RGGWCCY 1 cut(s) 1276
Psp6I CCWGG 2 cut(s) 1631, 2689
PspEI GGTNACC 2 cut(s) 1112, 2309
PspGI CCWGG 2 cut(s) 1631, 2689
PspN4I GGNNCC 3 cut(s) 2488, 2632, 2648
PspPI GGNCC 5 cut(s) 922, 1163, 1276, 1576, 2245
PspPPI RGGWCCY 1 cut(s) 1276
PspXI VCTCGAGB 1 cut(s) 1997
PsuI RGATCY 2 cut(s) 1267, 1864
PsyI GACNNNGTC 1 cut(s) 254
PvuII CAGCTG 1 cut(s) 218
RsaI GTAC 7 cut(s) 480, 1067, 1309, 1530, 1774, 2488, 2835
RsaNI GTAC 7 cut(s) 479, 1066, 1308, 1529, 1773, 2487, 2834
RseI CAYNNNNRTG 1 cut(s) 851
SapI GCTCTTC 2 cut(s) 1413, 1632
SatI GCNGC 4 cut(s) 92, 95, 241, 2582
Sau96I GGNCC 5 cut(s) 922, 1163, 1276, 1576, 2245
ScaI AGTACT 1 cut(s) 1774
SchI GAGTC 5 cut(s) 429, 1329, 1982, 2009, 2731
ScrFI CCNGG 3 cut(s) 1195, 1633, 2691
SfaNI GCATC 4 cut(s) 867, 1983, 2719, 2924
SfoI GGCGCC 1 cut(s) 2648
Sfr274I CTCGAG 2 cut(s) 1271, 1997
SinI GGWCC 4 cut(s) 922, 1163, 1276, 1576
SlaI CTCGAG 2 cut(s) 1271, 1997
SmiMI CAYNNNNRTG 1 cut(s) 851
SmlI CTYRAG 7 cut(s) 911, 1084, 1271, 1322, 1997, 2758, 2876
SmoI CTYRAG 7 cut(s) 911, 1084, 1271, 1322, 1997, 2758, 2876
SpeI ACTAGT 1 cut(s) 608
SphI GCATGC 2 cut(s) 864, 1819
SseBI AGGCCT 1 cut(s) 236
SsiI CCGC 6 cut(s) 1342, 1480, 1506, 2086, 2639, 2801
SspDI GGCGCC 1 cut(s) 2646
SspMI CTAG 6 cut(s) 593, 609, 614, 1017, 1346, 2856
StuI AGGCCT 1 cut(s) 236
StyD4I CCNGG 3 cut(s) 1193, 1631, 2689
StyI CCWWGG 4 cut(s) 943, 1345, 1501, 2502
TaaI ACNGT 8 cut(s) 254, 498, 772, 1060, 1307, 1618, 2296, 2309
TaqI TCGA 6 cut(s) 258, 447, 744, 1272, 1314, 1998
TatI WGTACW 1 cut(s) 1772
TfiI GAWTC 8 cut(s) 662, 1138, 1247, 1382, 2097, 2270, 2365, 2419
TscAI CASTG 8 cut(s) 45, 1621, 1689, 1849, 2185, 2301, 2488, 2754
TseFI GTSAC 1 cut(s) 993
TseI GCWGC 4 cut(s) 91, 94, 240, 2581
Tsp45I GTSAC 1 cut(s) 993
TspDTI ATGAA 9 cut(s) 44, 831, 1167, 1395, 1874, 2037, 2237, 2419, 2664
TspGWI ACGGA 1 cut(s) 655
TspRI CASTG 8 cut(s) 45, 1621, 1689, 1849, 2185, 2301, 2488, 2754
Tth111I GACNNNGTC 1 cut(s) 254
Van91I CCANNNNNTGG 1 cut(s) 2254
Vha464I CTTAAG 1 cut(s) 1322
VpaK11BI GGWCC 4 cut(s) 922, 1163, 1276, 1576
VspI ATTAAT 3 cut(s) 1221, 1736, 2894
XbaI TCTAGA 1 cut(s) 613
XceI RCATGY 4 cut(s) 864, 940, 1672, 1819
XcmI CCANNNNNNNNNTGG 1 cut(s) 791
XhoI CTCGAG 2 cut(s) 1271, 1997
XmaJI CCTAGG 1 cut(s) 1345
XmiI GTMKAC 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 1876
XspI CTAG 6 cut(s) 593, 609, 614, 1017, 1346, 2856
ZrmI AGTACT 1 cut(s) 1774
Zsp2I ATGCAT 1 cut(s) 862
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.