Rw5G050530

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
87272794 .. 87275937
3144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G050530.1

Sequence Viewer

Length: 2784 bp
ATGGGGTTATCATCTCTATGTTTAGCATTTGCGTCGATGTTTATCCTTTCAAAATTTGTCTGGTCACATCTTGTCGTGGCTGACTCTTTGCAGTCATATACTCCTCCTTGCCATGATGATGAGATCTCTGCCTTACTGCAATTCAAGCAAAGCTTTGTCATCAAGATGTCTGCTTCAAGTTATGAGGGTGCTTATCCAAAGATTTCTTCATGGAAATCAAACAGCAATTGTTGCTCATGGGACGGGATCGAGTGCGATGAGGAGACTCATCATGTGATTGGACTTGATCTTAGTAGCAGTTATCTCTATGGCTCTATCAACTCCAACAACACCATCTTCCGCCTTGTTCATCTTGAGAGCCTCAACCTTGCTGACAATGATTTTGATTTCTCTCAAATTCCTCATACCATTAGGAACTTTCCAAAGCTCAGGTATCTCAACTTCTCTTTCTCTGGCTTTTCTGGTCAAGTCCCGTCTGAAGTTTCACAATTGACCAAGTTGTCATCCCTTGATCTATCTCAAAATATTGACATGTTTTCTAATGATGAATTGTTAAGAAGCTTAGCTCAAAATTTAACTGGCCTACAAACACTTGATCTTTCTAATATTAACATATCATCCACGGTACCTAATACCTTGGCCAATTTCTCACATTTGACATCCCTCGTCCTAATTTCATGCAACATGTTTGGCAAATTACCATTTTCTCTTGGTAATCTCAGACATCTCATTTATTTGTACCTTTCATTTAATGAGTTCAATGGCCAAATTCCTTCTTCATTTGTGAATCTTACCCAACTCACACGTCTTTCACTTCGGCAGAACCATATTAGTGGCACTATCCCATGTTTTTTGGGAAATCTTACCCAACTCACATATCTTTCACTTGGGGAGAACCATATTAATGGCACTATCCCATGTTTTTTTGGAAATCTTACCCAGCTTGCAACACTTCGTCTTAATTCAAATCAATTATCTGGTTCAATCCCATCTTGTCTAGGTAATCTTCGCAAACTTACTGTTTTAGATCTTAATTTCAATAAATTTCAGAGAGAGATTCCTGAGTCATTATTCAATGTAGCAAGTCTCGAGAGACTTCTTCTAGCTTATAATAATCTCAGTGGTAGAGTGGAGTTCCTCAAACTTCTTAAGCTACCAAATTTAGAGTGGGTCGATCTATCTGGTAACAGCTTGGATGTGATCACTGAAACCAAAACTATGAATGCATCTAGCATTGCAAGGTTAGAGTATCTAGGATTGGGTTCGTGCAACATAAGTGAGTTCCCAAATTTCTTAAGATATCAAAATACATTAATGTACTTGAACCTTTCTGGGAACGGAATGCATGGCCAAGTACCAAAATGGATGTGGAACACGAGCAGAGAGTCTTTGGGGTTCTTGGACATTTCTCATAACCTCCTTTCAGGCTTTGACCAGCCTCCAGTTGTCCTTCCCTGGGTTGGACTAGAGGGGCTAGATCTTTCGTTCAACAAGCTTAGTGGCCCAATGTTGGTACCTTCGTTACAATCCCTGATGTTCTATCACATTTCAAACAACAAATTAACTGGAGAAATTTCACCTTTGATTTGTAATGCCAGTTCTCTTATTTCCCTTGATGTGTCAAGTAACCATTTGAGTGGTATGCTTCCGCGGTGTCTACAAAACTTCAGAAGTAATCTTCAAGTTTTAAGTGTTGCAAACAACTATTTTCATGGCACTCTTCCTCGTATAGGCACCAATGGAAGCGATTTGATCATGATTGATGTCAGTCGTAACCAACTGCAGGGGAAATTACCGAGGTCATTGGTGAATTGTTTAAGCCTCGAGTCTCTCGTTCTGTCTAGCAATAAGTTCGATGATGTATTCCCCGTTTGGTTGGGAACTCTTCCGGAATTAAAAGTTTTGGCAATGAGGAATAGTGGGTTCCACGGTGCTATTCCGAGATATCAAAGCAATCACGATGGTTTCCCCAATTTGCGCATCCTTGATCTGTCTCAAAATAATTTTACTGGTCAGTTTGCATTTGAATCCATCCTCTCTGGAAAATCAATGAGAGGTATCCATCTAAACGGATCGGCGTACATGAAAGCATTTGGACTCAAGTCTTATAAAGGCGGCGACCGTGATAGGTATTATACAGCTAGTTACAGATTTGAGTACTCAATCACGCTGATGAATAAAGGTTTAGAGAGATATTTCCAAAAGATTCGCGAAGACTTTATGGCCATCGATCTGTCGAGCAATAGATTTGAAGGCAAGATTCCAGAATTTTTTGGGAACCTAAAGGGGATTCGCTCACTTAATGTATCCAGTAACATTCTAAGTGGCCGCATCCAACCATCCTTGGGAAACTTGACAAATCTTGAAGCTTTGGACCTTTCACATAACAAATTCTTGGGTGAGCTCCCTCCATCACTGTTGCAGCTTTCATCCCTCCAAATTTTCAGCGTCTCGCACAACAATCTCACAGGTCAAATACCGGTTGGAAACCAGTTTAATACCTTCGACAAAACTTCGTATGAGGGAAACCCAGGTTTGTGTGGATTTCCATTGCCAAAGAAATGTTCACGTTCTGGGGAGGGGCCTGAACTTCCACCTTCAACAGCAGAAGAAGAAGATGGAGTTGAATTGGATTGGAAATTTGCTGCGGCGGGGTTAGTAAGTGGGTTGGTGGTGGGAGTGGTTCTTGCAGACTTTGTGATCACGAGGTTCAGTGAGCGGTTCATTGAGATTGTTGCATTTCTGATCAGACTGATGAAAAGGATGAGAAGGCCCAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

927

Amino Acids

103.31

Weight (kDa)

6.86

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 86 3.7e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 107 - 226 9.8e-09 Leucine-rich repeat region
LRR_14 PF23598 213 - 295 2.7e-08 Leucine-rich repeat region
LRR_14 PF23598 285 - 470 7.1e-13 Leucine-rich repeat region
LRR_8 PF13855 290 - 349 1.3e-07 Leucine rich repeat
LRR_8 PF13855 314 - 373 4.5e-06 Leucine rich repeat
LRR_8 PF13855 558 - 618 9.5e-07 Leucine rich repeat
LRR_8 PF13855 742 - 798 1.4e-06 Leucine rich repeat
LRR_LRWD1 PF23211 761 - 846 1.2e-06 Leucine-rich repeat and WD repeat-containing protein 1, LRR
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1110, 2109
AasI GACNNNNNNGTC 1 cut(s) 499
Acc16I TGCGCA 1 cut(s) 1979
Acc65I GGTACC 2 cut(s) 625, 1513
AccB1I GGYRCC 3 cut(s) 625, 1513, 1733
AccBSI CCGCTC 1 cut(s) 2719
AccI GTMKAC 1 cut(s) 1657
AccII CGCG 2 cut(s) 1651, 2211
AccIII TCCGGA 1 cut(s) 1888
AciI CCGC 8 cut(s) 340, 1649, 1651, 2115, 2329, 2648, 2651, 2719
AclWI GGATC 2 cut(s) 254, 2080
AcoI YGGCCR 5 cut(s) 639, 763, 1348, 2223, 2326
AcuI CTGAAG 2 cut(s) 498, 1651
AfaI GTAC 7 cut(s) 627, 740, 1319, 1356, 1515, 2081, 2159
AfiI CCNNNNNNNGG 6 cut(s) 1456, 1460, 1510, 1730, 1783, 2345
AflII CTTAAG 2 cut(s) 1148, 1294
AflIII ACRYGT 3 cut(s) 531, 684, 803
AgeI ACCGGT 1 cut(s) 2479
AjiI CACGTC 1 cut(s) 806
AjnI CCWGG 2 cut(s) 1454, 2530
AjuI GAANNNNNNNTTGG 4 cut(s) 190, 222, 2548, 2580
Alw21I GWGCWC 1 cut(s) 2406
Alw26I GTCTC 6 cut(s) 257, 1087, 1091, 1833, 1998, 2455
AlwI GGATC 2 cut(s) 254, 2080
Ama87I CYCGRG 2 cut(s) 1088, 1823
Aor13HI TCCGGA 1 cut(s) 1888
AoxI GGCC 9 cut(s) 580, 639, 763, 1348, 1501, 2223, 2326, 2582, 2771
ApeKI GCWGC 2 cut(s) 2422, 2645
ArsI GACNNNNNNTTYG 2 cut(s) 365, 397
AseI ATTAAT 2 cut(s) 903, 1313
AsiGI ACCGGT 1 cut(s) 2479
Asp718I GGTACC 2 cut(s) 625, 1513
AspLEI GCGC 1 cut(s) 1980
AspS9I GGNCC 4 cut(s) 1502, 2374, 2582, 2772
AsuHPI GGTGA 3 cut(s) 1569, 1819, 2411
AvaI CYCGRG 2 cut(s) 1088, 1823
AvaII GGWCC 1 cut(s) 2374
BaeI ACNNNNGTAYC 2 cut(s) 1505, 1538
BalI TGGCCA 4 cut(s) 641, 765, 1350, 2225
BanI GGYRCC 3 cut(s) 625, 1513, 1733
BanII GRGCYC 1 cut(s) 2406
BarI GAAGNNNNNNTAC 2 cut(s) 425, 457
BauI CACGAG 2 cut(s) 1375, 2704
BbsI GAAGAC 1 cut(s) 2220
Bbv12I GWGCWC 1 cut(s) 2406
BbvI GCAGC 2 cut(s) 2434, 2632
BccI CCATC 9 cut(s) 341, 997, 1955, 2039, 2070, 2234, 2347, 2419, 2612
BcgI CGANNNNNNTGC 4 cut(s) 15, 49, 1834, 1868
BciT130I CCWGG 2 cut(s) 1456, 2532
BciVI GTATCC 2 cut(s) 2069, 2317
BclI TGATCA 4 cut(s) 1200, 1752, 2700, 2745
BcoDI GTCTC 6 cut(s) 257, 1087, 1091, 1833, 1998, 2455
BfaI CTAG 8 cut(s) 998, 1103, 1230, 1253, 1466, 1475, 1842, 2142
BfmI CTRYAG 1 cut(s) 1781
BfrI CTTAAG 2 cut(s) 1148, 1294
BfuI GTATCC 2 cut(s) 2069, 2317
BglII AGATCT 3 cut(s) 123, 1027, 1477
BisI GCNGC 5 cut(s) 2116, 2329, 2423, 2646, 2649
BlpI GCTNAGC 1 cut(s) 562
BlsI GCNGC 5 cut(s) 2117, 2330, 2424, 2647, 2650
BmcAI AGTACT 1 cut(s) 2159
Bme1390I CCNGG 2 cut(s) 1456, 2532
Bme18I GGWCC 1 cut(s) 2374
BmeT110I CYCGRG 2 cut(s) 1088, 1823
BmgBI CACGTC 1 cut(s) 806
BmgT120I GGNCC 4 cut(s) 1502, 2374, 2582, 2772
BmiI GGNNCC 6 cut(s) 627, 1515, 1735, 1925, 2279, 2583
BmrFI CCNGG 2 cut(s) 1456, 2532
BmsI GCATC 3 cut(s) 1235, 1989, 2340
BoxI GACNNNNGTC 1 cut(s) 2101
BpiI GAAGAC 1 cut(s) 2220
BpmI CTGGAG 2 cut(s) 1425, 1587
Bpu10I CCTNAGC 1 cut(s) 428
Bpu1102I GCTNAGC 1 cut(s) 562
BpuEI CTTGAG 2 cut(s) 374, 2084
Bsa29I ATCGAT 1 cut(s) 2229
BsaBI GATNNNNATC 1 cut(s) 41
BsaJI CCNNGG 9 cut(s) 621, 636, 1454, 1455, 1649, 1796, 1927, 2343, 2530
BsaWI WCCGGW 2 cut(s) 1888, 2479
Bsc4I CCNNNNNNNGG 6 cut(s) 1456, 1460, 1510, 1730, 1783, 2345
Bse118I RCCGGY 1 cut(s) 2479
Bse1I ACTGG 7 cut(s) 583, 1442, 1570, 1596, 2014, 2310, 2491
Bse3DI GCAATG 3 cut(s) 1233, 1914, 2549
Bse8I GATNNNNATC 1 cut(s) 41
BseAI TCCGGA 1 cut(s) 1888
BseBI CCWGG 2 cut(s) 1456, 2532
BseCI ATCGAT 1 cut(s) 2229
BseDI CCNNGG 9 cut(s) 621, 636, 1454, 1455, 1649, 1796, 1927, 2343, 2530
BseJI GATNNNNATC 1 cut(s) 41
BseLI CCNNNNNNNGG 6 cut(s) 1456, 1460, 1510, 1730, 1783, 2345
BseMI GCAATG 3 cut(s) 1233, 1914, 2549
BseMII CTCAG 4 cut(s) 442, 733, 1053, 1132
BseNI ACTGG 7 cut(s) 583, 1442, 1570, 1596, 2014, 2310, 2491
BseRI GAGGAG 2 cut(s) 93, 275
BseXI GCAGC 2 cut(s) 2434, 2632
BseYI CCCAGC 1 cut(s) 939
Bsh1236I CGCG 2 cut(s) 1651, 2211
Bsh1285I CGRYCG 1 cut(s) 2122
BshFI GGCC 9 cut(s) 582, 641, 765, 1350, 1503, 2225, 2328, 2584, 2773
BshNI GGYRCC 3 cut(s) 625, 1513, 1733
BshTI ACCGGT 1 cut(s) 2479
BshVI ATCGAT 1 cut(s) 2229
BsiEI CGRYCG 1 cut(s) 2122
BsiHKAI GWGCWC 1 cut(s) 2406
BsiHKCI CYCGRG 2 cut(s) 1088, 1823
BsiSI CCGG 2 cut(s) 1889, 2480
BslFI GGGAC 2 cut(s) 254, 455
BslI CCNNNNNNNGG 6 cut(s) 1456, 1460, 1510, 1730, 1783, 2345
BsmAI GTCTC 6 cut(s) 257, 1087, 1091, 1833, 1998, 2455
BsmBI CGTCTC 1 cut(s) 2455
BsmFI GGGAC 2 cut(s) 254, 455
BsmI GAATGC 2 cut(s) 1228, 1347
BsnI GGCC 9 cut(s) 582, 641, 765, 1350, 1503, 2225, 2328, 2584, 2773
BsoBI CYCGRG 2 cut(s) 1088, 1823
Bsp1286I GDGCHC 1 cut(s) 2406
Bsp13I TCCGGA 1 cut(s) 1888
Bsp1720I GCTNAGC 1 cut(s) 562
Bsp68I TCGCGA 1 cut(s) 2211
BspACI CCGC 8 cut(s) 340, 1649, 1651, 2115, 2329, 2648, 2651, 2719
BspANI GGCC 9 cut(s) 582, 641, 765, 1350, 1503, 2225, 2328, 2584, 2773
BspCNI CTCAG 4 cut(s) 441, 732, 1054, 1131
BspDI ATCGAT 1 cut(s) 2229
BspEI TCCGGA 1 cut(s) 1888
BspFNI CGCG 2 cut(s) 1651, 2211
BspHI TCATGA 1 cut(s) 1755
BspLI GGNNCC 6 cut(s) 627, 1515, 1735, 1925, 2279, 2583
BspMAI CTGCAG 1 cut(s) 1785
BspPI GGATC 2 cut(s) 254, 2080
BspT107I GGYRCC 3 cut(s) 625, 1513, 1733
BspTI CTTAAG 2 cut(s) 1148, 1294
BsrBI CCGCTC 1 cut(s) 2719
BsrDI GCAATG 3 cut(s) 1233, 1914, 2549
BsrFI RCCGGY 1 cut(s) 2479
BsrI ACTGG 7 cut(s) 583, 1442, 1570, 1596, 2014, 2310, 2491
BssAI RCCGGY 1 cut(s) 2479
BssECI CCNNGG 9 cut(s) 621, 636, 1454, 1455, 1649, 1796, 1927, 2343, 2530
BssSI CACGAG 2 cut(s) 1375, 2704
BssT1I CCWWGG 2 cut(s) 636, 2343
Bst2BI CACGAG 2 cut(s) 1375, 2704
Bst2UI CCWGG 2 cut(s) 1456, 2532
Bst4CI ACNGT 5 cut(s) 625, 1021, 1931, 2123, 2418
Bst6I CTCTTC 2 cut(s) 1725, 1890
BstAFI CTTAAG 2 cut(s) 1148, 1294
BstAPI GCANNNNNTGC 1 cut(s) 231
BstC8I GCNNGC 1 cut(s) 945
BstDEI CTNAG 8 cut(s) 290, 428, 562, 719, 1062, 1118, 1496, 2321
BstDSI CCRYGG 3 cut(s) 621, 1649, 1927
BstENI CCTNNNNNAGG 1 cut(s) 1728
BstFNI CGCG 2 cut(s) 1651, 2211
BstHHI GCGC 1 cut(s) 1980
BstMAI GTCTC 6 cut(s) 257, 1087, 1091, 1833, 1998, 2455
BstMCI CGRYCG 1 cut(s) 2122
BstMWI GCNNNNNNNGC 2 cut(s) 145, 231
BstNI CCWGG 2 cut(s) 1456, 2532
BstNSI RCATGY 2 cut(s) 535, 688
BstPAI GACNNNNGTC 1 cut(s) 2101
BstSCI CCNGG 2 cut(s) 1454, 2530
BstSFI CTRYAG 1 cut(s) 1781
BstUI CGCG 2 cut(s) 1651, 2211
BstV1I GCAGC 2 cut(s) 2434, 2632
BstV2I GAAGAC 1 cut(s) 2220
BstX2I RGATCY 3 cut(s) 123, 1027, 1477
BstXI CCANNNNNNTGG 3 cut(s) 833, 905, 1637
BstYI RGATCY 3 cut(s) 123, 1027, 1477
Bsu15I ATCGAT 1 cut(s) 2229
BsuI GTATCC 2 cut(s) 2069, 2317
BsuRI GGCC 9 cut(s) 582, 641, 765, 1350, 1503, 2225, 2328, 2584, 2773
BsuTUI ATCGAT 1 cut(s) 2229
BtgI CCRYGG 3 cut(s) 621, 1649, 1927
BtgZI GCGATG 1 cut(s) 270
BtrI CACGTC 1 cut(s) 806
BtsIMutI CAGTG 4 cut(s) 1126, 1203, 2414, 2719
BtuMI TCGCGA 1 cut(s) 2211
Cac8I GCNNGC 1 cut(s) 945
CciI TCATGA 1 cut(s) 1755
CfoI GCGC 1 cut(s) 1980
Cfr10I RCCGGY 1 cut(s) 2479
Cfr13I GGNCC 4 cut(s) 1502, 2374, 2582, 2772
Cfr42I CCGCGG 1 cut(s) 1652
ClaI ATCGAT 1 cut(s) 2229
CseI GACGC 2 cut(s) 21, 2437
Csp6I GTAC 7 cut(s) 626, 739, 1318, 1355, 1514, 2080, 2158
CspAI ACCGGT 1 cut(s) 2479
CspCI CAANNNNNGTGG 2 cut(s) 1480, 1515
CviQI GTAC 7 cut(s) 626, 739, 1318, 1355, 1514, 2080, 2158
DdeI CTNAG 8 cut(s) 290, 428, 562, 719, 1062, 1118, 1496, 2321
DrdI GACNNNNNNGTC 1 cut(s) 499
DseDI GACNNNNNNGTC 1 cut(s) 499
EaeI YGGCCR 5 cut(s) 639, 763, 1348, 2223, 2326
Eam1104I CTCTTC 2 cut(s) 1725, 1890
EarI CTCTTC 2 cut(s) 1725, 1890
EciI GGCGGA 1 cut(s) 329
Ecl136II GAGCTC 1 cut(s) 2404
Eco130I CCWWGG 2 cut(s) 636, 2343
Eco24I GRGCYC 1 cut(s) 2406
Eco32I GATATC 2 cut(s) 1301, 1946
Eco47I GGWCC 1 cut(s) 2374
Eco53kI GAGCTC 1 cut(s) 2404
Eco57I CTGAAG 2 cut(s) 498, 1651
Eco88I CYCGRG 2 cut(s) 1088, 1823
EcoICRI GAGCTC 1 cut(s) 2404
EcoNI CCTNNNNNAGG 1 cut(s) 1728
EcoO109I RGGNCCY 1 cut(s) 2582
EcoRII CCWGG 2 cut(s) 1454, 2530
EcoRV GATATC 2 cut(s) 1301, 1946
EcoT14I CCWWGG 2 cut(s) 636, 2343
EcoT22I ATGCAT 2 cut(s) 1228, 1347
EcoT38I GRGCYC 1 cut(s) 2406
ErhI CCWWGG 2 cut(s) 636, 2343
Esp3I CGTCTC 1 cut(s) 2455
FalI AAGNNNNNCTT 2 cut(s) 137, 169
FaqI GGGAC 2 cut(s) 254, 455
FauI CCCGC 1 cut(s) 2644
FbaI TGATCA 4 cut(s) 1200, 1752, 2700, 2745
FblI GTMKAC 1 cut(s) 1657
Fnu4HI GCNGC 5 cut(s) 2116, 2329, 2423, 2646, 2649
FriOI GRGCYC 1 cut(s) 2406
Fsp4HI GCNGC 5 cut(s) 2116, 2329, 2423, 2646, 2649
FspBI CTAG 8 cut(s) 998, 1103, 1230, 1253, 1466, 1475, 1842, 2142
FspI TGCGCA 1 cut(s) 1979
GlaI GCGC 1 cut(s) 1979
GluI GCNGC 5 cut(s) 2116, 2329, 2423, 2646, 2649
GsaI CCCAGC 1 cut(s) 943
GsuI CTGGAG 2 cut(s) 1425, 1587
HaeIII GGCC 9 cut(s) 582, 641, 765, 1350, 1503, 2225, 2328, 2584, 2773
HapII CCGG 2 cut(s) 1889, 2480
HgaI GACGC 2 cut(s) 21, 2437
HhaI GCGC 1 cut(s) 1980
Hin6I GCGC 1 cut(s) 1978
HinP1I GCGC 1 cut(s) 1978
HindIII AAGCTT 4 cut(s) 151, 559, 1493, 2367
HpaII CCGG 2 cut(s) 1889, 2480
HphI GGTGA 3 cut(s) 1569, 1819, 2411
Hpy166II GTNNAC 2 cut(s) 1658, 2567
Hpy188I TCNGA 7 cut(s) 478, 722, 1050, 1670, 1941, 2745, 2750
Hpy8I GTNNAC 2 cut(s) 1658, 2567
Hpy99I CGWCG 1 cut(s) 37
HpyAV CCTTC 7 cut(s) 783, 1460, 1527, 2246, 2512, 2607, 2763
HpyCH4III ACNGT 5 cut(s) 625, 1021, 1931, 2123, 2418
HpyCH4IV ACGT 2 cut(s) 805, 2569
HpyF10VI GCNNNNNNNGC 2 cut(s) 145, 231
HpyF3I CTNAG 8 cut(s) 290, 428, 562, 719, 1062, 1118, 1496, 2321
HpySE526I ACGT 2 cut(s) 805, 2569
HspAI GCGC 1 cut(s) 1978
Kpn2I TCCGGA 1 cut(s) 1888
KpnI GGTACC 2 cut(s) 629, 1517
Ksp22I TGATCA 4 cut(s) 1200, 1752, 2700, 2745
KspI CCGCGG 1 cut(s) 1652
LmnI GCTCC 1 cut(s) 2409
Lsp1109I GCAGC 2 cut(s) 2434, 2632
LweI GCATC 3 cut(s) 1235, 1989, 2340
MaeI CTAG 8 cut(s) 998, 1103, 1230, 1253, 1466, 1475, 1842, 2142
MaeII ACGT 2 cut(s) 805, 2569
MaeIII GTNAC 7 cut(s) 63, 1184, 1521, 1625, 1772, 2144, 2312
MbiI CCGCTC 1 cut(s) 2719
MfeI CAATTG 2 cut(s) 226, 488
MflI RGATCY 3 cut(s) 123, 1027, 1477
MhlI GDGCHC 1 cut(s) 2406
MlsI TGGCCA 4 cut(s) 641, 765, 1350, 2225
MluNI TGGCCA 4 cut(s) 641, 765, 1350, 2225
MlyI GAGTC 6 cut(s) 77, 259, 1073, 1394, 1835, 2091
MmeI TCCRAC 4 cut(s) 348, 1441, 2359, 2464
Mox20I TGGCCA 4 cut(s) 641, 765, 1350, 2225
Mph1103I ATGCAT 2 cut(s) 1228, 1347
MroI TCCGGA 1 cut(s) 1888
MscI TGGCCA 4 cut(s) 641, 765, 1350, 2225
MslI CAYNNNNRTG 7 cut(s) 16, 117, 164, 831, 903, 1635, 2171
Msp20I TGGCCA 4 cut(s) 641, 765, 1350, 2225
MspA1I CMGCKG 1 cut(s) 1651
MspCI CTTAAG 2 cut(s) 1148, 1294
MspI CCGG 2 cut(s) 1889, 2480
MspR9I CCNGG 2 cut(s) 1456, 2532
MunI CAATTG 2 cut(s) 226, 488
Mva1269I GAATGC 2 cut(s) 1228, 1347
MvaI CCWGG 2 cut(s) 1456, 2532
MvnI CGCG 2 cut(s) 1651, 2211
MwoI GCNNNNNNNGC 2 cut(s) 145, 231
NlaIV GGNNCC 6 cut(s) 627, 1515, 1735, 1925, 2279, 2583
NmuCI GTSAC 1 cut(s) 63
NruI TCGCGA 1 cut(s) 2211
NsbI TGCGCA 1 cut(s) 1979
NsiI ATGCAT 2 cut(s) 1228, 1347
NspI RCATGY 2 cut(s) 535, 688
PaeR7I CTCGAG 2 cut(s) 1088, 1823
PagI TCATGA 1 cut(s) 1755
PasI CCCWGGG 1 cut(s) 1455
PciI ACATGT 2 cut(s) 531, 684
PcsI WCGNNNNNNNCGW 1 cut(s) 1830
PctI GAATGC 2 cut(s) 1228, 1347
PfeI GAWTC 6 cut(s) 787, 1057, 2027, 2206, 2260, 2290
PinAI ACCGGT 1 cut(s) 2479
PkrI GCNGC 5 cut(s) 2117, 2330, 2424, 2647, 2650
PleI GAGTC 6 cut(s) 77, 259, 1072, 1393, 1834, 2091
PpsI GAGTC 6 cut(s) 77, 259, 1072, 1393, 1834, 2091
PscI ACATGT 2 cut(s) 531, 684
PshAI GACNNNNGTC 1 cut(s) 2101
PshBI ATTAAT 2 cut(s) 903, 1313
PsiI TTATAA 2 cut(s) 1110, 2109
Psp124BI GAGCTC 1 cut(s) 2406
Psp6I CCWGG 2 cut(s) 1454, 2530
PspFI CCCAGC 1 cut(s) 939
PspGI CCWGG 2 cut(s) 1454, 2530
PspN4I GGNNCC 6 cut(s) 627, 1515, 1735, 1925, 2279, 2583
PspPI GGNCC 4 cut(s) 1502, 2374, 2582, 2772
PspXI VCTCGAGB 1 cut(s) 1823
PsrI GAACNNNNNNTAC 2 cut(s) 1582, 1614
PstI CTGCAG 1 cut(s) 1785
PsuI RGATCY 3 cut(s) 123, 1027, 1477
RruI TCGCGA 1 cut(s) 2211
RsaI GTAC 7 cut(s) 627, 740, 1319, 1356, 1515, 2081, 2159
RsaNI GTAC 7 cut(s) 626, 739, 1318, 1355, 1514, 2080, 2158
RseI CAYNNNNRTG 7 cut(s) 16, 117, 164, 831, 903, 1635, 2171
SacI GAGCTC 1 cut(s) 2406
SacII CCGCGG 1 cut(s) 1652
SatI GCNGC 5 cut(s) 2116, 2329, 2423, 2646, 2649
Sau96I GGNCC 4 cut(s) 1502, 2374, 2582, 2772
ScaI AGTACT 1 cut(s) 2159
SchI GAGTC 6 cut(s) 77, 259, 1073, 1394, 1835, 2091
ScrFI CCNGG 2 cut(s) 1456, 2532
SduI GDGCHC 1 cut(s) 2406
SfaNI GCATC 3 cut(s) 1235, 1989, 2340
SfcI CTRYAG 1 cut(s) 1781
Sfr274I CTCGAG 2 cut(s) 1088, 1823
Sfr303I CCGCGG 1 cut(s) 1652
SgrBI CCGCGG 1 cut(s) 1652
SinI GGWCC 1 cut(s) 2374
SlaI CTCGAG 2 cut(s) 1088, 1823
SmiMI CAYNNNNRTG 7 cut(s) 16, 117, 164, 831, 903, 1635, 2171
SmlI CTYRAG 6 cut(s) 353, 1088, 1148, 1294, 1823, 2099
SmoI CTYRAG 6 cut(s) 353, 1088, 1148, 1294, 1823, 2099
SsiI CCGC 8 cut(s) 340, 1649, 1651, 2115, 2329, 2648, 2651, 2719
SspI AATATT 2 cut(s) 526, 607
SspMI CTAG 8 cut(s) 998, 1103, 1230, 1253, 1466, 1475, 1842, 2142
SstI GAGCTC 1 cut(s) 2406
StyD4I CCNGG 2 cut(s) 1454, 2530
StyI CCWWGG 2 cut(s) 636, 2343
TaaI ACNGT 5 cut(s) 625, 1021, 1931, 2123, 2418
TaiI ACGT 2 cut(s) 808, 2572
TaqI TCGA 9 cut(s) 35, 249, 1089, 1173, 1824, 1854, 2229, 2237, 2505
TatI WGTACW 2 cut(s) 1317, 2157
TauI GCSGC 3 cut(s) 2118, 2331, 2651
TfiI GAWTC 6 cut(s) 787, 1057, 2027, 2206, 2260, 2290
TscAI CASTG 4 cut(s) 1126, 1210, 2421, 2719
TseFI GTSAC 1 cut(s) 63
TseI GCWGC 2 cut(s) 2422, 2645
Tsp45I GTSAC 1 cut(s) 63
TspGWI ACGGA 2 cut(s) 1353, 2085
TspRI CASTG 4 cut(s) 1126, 1210, 2421, 2719
Vha464I CTTAAG 2 cut(s) 1148, 1294
VpaK11BI GGWCC 1 cut(s) 2374
VspI ATTAAT 2 cut(s) 903, 1313
XagI CCTNNNNNAGG 1 cut(s) 1728
XceI RCATGY 2 cut(s) 535, 688
XcmI CCANNNNNNNNNTGG 2 cut(s) 1164, 1365
XhoI CTCGAG 2 cut(s) 1088, 1823
XmiI GTMKAC 1 cut(s) 1657
XspI CTAG 8 cut(s) 998, 1103, 1230, 1253, 1466, 1475, 1842, 2142
ZrmI AGTACT 1 cut(s) 2159
Zsp2I ATGCAT 2 cut(s) 1228, 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.