Rroxscaffold_4G00306350

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000024
Physical Location & Seq
Reverse (-)
27160487 .. 27166027
5541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00306350.1

Sequence Viewer

Length: 2946 bp
ATGCTCACCCAACTCGACCTCTCTTCCTCCGTCTTTGCTGGTCAAGTCCCATCTCAACTTTCACAATTGGTTAAGTTGTCAGTCCTCAATCTTTCTTCCAATACCGAACCTTCTTCTGGTGTAGGATTGTTGAAAATTGATGGATCCAATTTCAGAAATCTAGTTCAAAACTTAACCAGTCTAGAACATCTTCGTCTCCGTTACATCAACATATCTTCGACAATCCCCCATTCCATGGCTAATTTATCATTTTTGACAACCCTTGACTTACATCAATGCGAGTTGTTTGGAGACTTCCCGGTAACAATTTTCCACTTCCAGAACTTGAAGAATCTTTATCTGAGAGACAACCAAGGTCTCATTGGTTATTTGCCTGAATTTAATCAAAGTAGTCGACTCACAACACTAGATGTTCATGGAACTAGATTTTCAGGGAACTTTCCTTCTTCCATTGGAAAGATTAATTCTTTGAAGCAGTTGGATGTGGCTGCATGCAATTTTTCAGCACGGTTGATTCCATCTTCTCTAGGTAATCTTAGACAGCTCACATATCTAGACATTTCAAAAAACAAATTTGGAGGTCCAATTCCTGATTCTTTTGCAAACCTTACAAAATTGACTACTTTTAGGATTGCTACAAGTCCATTAGCTACTGGTCCGGTCCCATCTTGGATAGGTAACTTCAGCCAACTTGTTTACCTAGATTTTTCATATAGTGGACTGAATGGTTCAATTCTTGCGTCGTTTTCCAATCTCACGAACCTTGAGATTCTTTATCTTCAGTTCAATCAGCTGAGAGGTACAGTGGAATTTCAAACATTTCAAAACCTTCAAAATCTCTACCAACTCGATCTAGGTGATAATAATCTGGAATTTCTCACTGATTCCGTGATTATGAATGCAACAGTTCCACAGTTCAACCTTCTAGGATTGGCTAGATGCAACTTGACACAGTTCCCATATTTCTTAAGATATCAAAAAAATTTGCAGTATTTGTACCTTGATCAAAACAAAATTCATGGCCAAGTACCGAAATGGATGTGGAACATGAGCTCCGAAAGTTTGAAGTTCTTCAACCTTGGCCATAACCTCCTCTCAGGTTTTGAGCAACTTCCAGTTGTGCTTCCTTGGGTGAACTTGGAATTTTTAAGTCTTTCATCCAACATGTTCCATGGGCCACTCCCAATACCGGCAGCATCCACTAGAGGGTATGAAGTTCAGGATAACAACTTTGCTGGAGAAGTTCCACCAGGGATCTGCAATATGAGTTCTCTTCTGGCCCTTGATGCGTCTAATAACAACTTCAGTGGCATGATTCCACAGTGTTTCAGAAACTTTAGCGACCATCTGACACTTTTGCTGCTTGGAAATAACTCATTTCATGGCACACTTCCTCAAACATACACCAACAAAAGCAACTTGAGGATGCTTGATGTGAGTCAAAATCAATTGCAAGGGCAACTACCGAGGTCATTGGCTAATTGTCTGATGCTTGAGACTTTGATTCTGTCAAACAATAACTTGAGTGACGTTTTCCCCTTTTGGTTGGCAACTCTTCCGGAGTTAAAACTTTTGGCAATGCGGCATAATGGGTTCCATGGAGTGATAGGAAAGCCGGAAAACAATCAACGGTTCCCGAAGTTGCGTATTTTAGATATGTCATATAACAATTTCACCGGCGAGTTTCTAGCTGAGCACATCTTCTTTGAGCATGCCATGAGACCAAGCATGACTGTCAGACAGACAACGTACATGGAGGCTGGCATCAGCTACGAAACTGGTAATGGTGTATTCACTTTCAATTATGGTGCCACGATTACAATAACGAGTAAAGGTCTGGACAGATACTATCCAAAGATTCAAGAAGCCTTTGCAGTCATTGATATCTCATGCAACAAATTTGAAGGGAAGATTGATGAATGGATTGGAAATCTAAAAGGGCTTCGCTCGCTGAATGTTTCCAATAACCTTCTCACCGGTAGGATCCCATCATCTTTGGGAAATTTAACAGATCTCGAATCACTGGACCTTTCCAATAACAAGCTCTCAGGAGAGATCCCCCAACAACTAGCGCTACTGACATTCCTTGCAGAATTCAATGTCTCTCACAACAATCTCACAGGTCCTATACCAAGTGGAACCCAACTGAGGGGGTTTAATGTCACTGCATATGAGGGAAACTCCGCACTGTGTGGAGATCCGTTGCCAAAGAAATGTGGGAACTCTAGTACCCCAGCTCAACTGCCACCTTCTGGAACAGAAGACAACAGTTCAGGGTCCGAAAATGAATTTGATAGGATTTTTGTGTTGGCTGGATACGGAAGTGGGTTGGTTATAGGAGTGATTCTTATGGATGAGTGGAATATAAAACCTCCTAGTTGGGTGAGTGCCGATCCTTGTGACGGCTGGGAAGGTATTAAGTGCACCAATTCACGCATCACTGCCTCAGTGTTGGCAGACATGGGTTTGAAAGGCCGACTACCCACTGATATCGAGTTGTTATCTGAGCTACAAATTCTAAACCTGGTTGGTTGCAGTTTCTTTGGTCCTATTCCAGATGCTATAAGATCTCTAACGAAGCTGTCTTACCTATCTCTGAAAAACAATAGTTTCAGTGGGCCAATTCCGCCTTCCATTGGTAATCTGGCCAATCTTACTTTTATAGACCTATCTGACAACAAGCTTCAGGGATCCATCCCAGTCTCTAATGGGACTACACCTTGTCATTTTGGGAACAATCAGCTCTCGGGCCCAATTCCACCTCGACTTTTCAGCTCAACGATGGCCATGATACATTTAATTTTTGACAGAAACAATCTAAGTGGTAGCATCCCTTCAACTGTTGGACTTGTTCAGACATTGCTGGCGGTACGCCTGGATGGAAATTCATTAAGTGGGCGTGTGCGTTCAAGCCTCAACAACCATACTAATGTGTCTGAACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

981

Amino Acids

108.14

Weight (kDa)

6.08

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 19 - 163 1.5e-09 Leucine-rich repeat region
LRR_14 PF23598 149 - 355 4.6e-13 Leucine-rich repeat region
LRR_8 PF13855 498 - 558 7.7e-06 Leucine rich repeat
LRR_8 PF13855 626 - 682 3.8e-08 Leucine rich repeat
LRR_8 PF13855 836 - 895 4.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1808
AccB7I CCANNNNNTGG 2 cut(s) 235, 2252
AccI GTMKAC 1 cut(s) 394
AccIII TCCGGA 1 cut(s) 1558
AciI CCGC 4 cut(s) 1582, 2184, 2627, 2867
AcoI YGGCCR 4 cut(s) 1021, 1081, 2646, 2784
AcuI CTGAAG 4 cut(s) 667, 764, 1288, 2669
AdeI CACNNNGTG 1 cut(s) 2192
AfaI GTAC 6 cut(s) 802, 998, 1029, 1751, 2230, 2871
AfeI AGCGCT 1 cut(s) 2073
AfiI CCNNNNNNNGG 9 cut(s) 116, 235, 1189, 1206, 2148, 2149, 2252, 2402, 2636
AflII CTTAAG 1 cut(s) 967
AflIII ACRYGT 1 cut(s) 1164
AgeI ACCGGT 1 cut(s) 1976
AjnI CCWGG 3 cut(s) 1249, 2523, 2874
AjuI GAANNNNNNNTTGG 4 cut(s) 577, 609, 2614, 2646
AloI GAACNNNNNNTCC 2 cut(s) 1037, 1069
Alw21I GWGCWC 3 cut(s) 1055, 1698, 2426
Alw26I GTCTC 8 cut(s) 200, 285, 339, 362, 1490, 1714, 2107, 2707
Alw44I GTGCAC 1 cut(s) 2422
Ama87I CYCGRG 1 cut(s) 2746
Aor13HI TCCGGA 1 cut(s) 1558
Aor51HI AGCGCT 1 cut(s) 2073
AoxI GGCC 9 cut(s) 1021, 1081, 1175, 1278, 2473, 2618, 2646, 2749, 2784
ApaI GGGCCC 1 cut(s) 2753
ApaLI GTGCAC 1 cut(s) 2422
ApeKI GCWGC 3 cut(s) 488, 1193, 1360
AseI ATTAAT 1 cut(s) 462
AsiGI ACCGGT 1 cut(s) 1976
Asp700I GAANNNNTTC 2 cut(s) 189, 1070
AspLEI GCGC 1 cut(s) 2074
AsuC2I CCSGG 1 cut(s) 299
AsuHPI GGTGA 5 cut(s) 869, 1144, 1666, 1966, 2395
AvaI CYCGRG 1 cut(s) 2746
AvaII GGWCC 7 cut(s) 581, 656, 661, 2026, 2123, 2277, 2546
BaeGI GKGCMC 2 cut(s) 2426, 2753
BaeI ACNNNNGTAYC 4 cut(s) 2212, 2245, 2308, 2341
BalI TGGCCA 4 cut(s) 1023, 1083, 2648, 2786
BamHI GGATCC 3 cut(s) 143, 1983, 2690
BanI GGYRCC 1 cut(s) 1808
BanII GRGCYC 2 cut(s) 1055, 2753
BarI GAAGNNNNNNTAC 4 cut(s) 2570, 2602, 2818, 2850
BbsI GAAGAC 1 cut(s) 2268
Bbv12I GWGCWC 3 cut(s) 1055, 1698, 2426
BbvI GCAGC 3 cut(s) 475, 1205, 1347
BccI CCATC 9 cut(s) 58, 134, 526, 673, 1353, 1996, 2702, 2776, 2873
BceAI ACGGC 1 cut(s) 2419
BciT130I CCWGG 3 cut(s) 1251, 2525, 2876
BciVI GTATCC 1 cut(s) 2309
BclI TGATCA 1 cut(s) 1003
BcnI CCSGG 1 cut(s) 299
BcoDI GTCTC 8 cut(s) 200, 285, 339, 362, 1490, 1714, 2107, 2707
BfoI RGCGCY 1 cut(s) 2075
BfrI CTTAAG 1 cut(s) 967
BfuI GTATCC 1 cut(s) 2309
BglII AGATCT 2 cut(s) 2011, 2567
BisI GCNGC 4 cut(s) 489, 1194, 1361, 1583
BlpI GCTNAGC 1 cut(s) 1692
BlsI GCNGC 4 cut(s) 490, 1195, 1362, 1584
Bme1390I CCNGG 4 cut(s) 299, 1251, 2525, 2876
Bme18I GGWCC 7 cut(s) 581, 656, 661, 2026, 2123, 2277, 2546
BmeT110I CYCGRG 1 cut(s) 2746
BmrFI CCNGG 4 cut(s) 299, 1251, 2525, 2876
BmrI ACTGGG 1 cut(s) 2693
BmsI GCATC 9 cut(s) 929, 1205, 1276, 1416, 1479, 1773, 2445, 2548, 2838
BmuI ACTGGG 1 cut(s) 2693
BpiI GAAGAC 1 cut(s) 2268
BplI GAGNNNNNCTC 2 cut(s) 2165, 2197
BpmI CTGGAG 1 cut(s) 1257
Bpu1102I GCTNAGC 1 cut(s) 1692
BpuEI CTTGAG 4 cut(s) 785, 1441, 1514, 1543
BpuMI CCSGG 1 cut(s) 299
BsaBI GATNNNNATC 1 cut(s) 864
BsaI GGTCTC 2 cut(s) 362, 1714
BsaJI CCNNGG 8 cut(s) 234, 352, 1078, 1127, 1171, 1250, 1466, 1597
BsaWI WCCGGW 3 cut(s) 658, 1558, 1976
BsaXI ACNNNNNCTCC 2 cut(s) 1037, 1067
Bsc4I CCNNNNNNNGG 9 cut(s) 116, 235, 1189, 1206, 2148, 2149, 2252, 2402, 2636
Bse118I RCCGGY 3 cut(s) 1189, 1676, 1976
Bse1I ACTGG 6 cut(s) 177, 658, 1115, 1783, 2028, 2699
Bse3DI GCAATG 2 cut(s) 1584, 2858
Bse8I GATNNNNATC 1 cut(s) 864
BseAI TCCGGA 1 cut(s) 1558
BseBI CCWGG 3 cut(s) 1251, 2525, 2876
BseDI CCNNGG 8 cut(s) 234, 352, 1078, 1127, 1171, 1250, 1466, 1597
BseGI GGATG 9 cut(s) 487, 1044, 1157, 1196, 1431, 2359, 2694, 2829, 2884
BseJI GATNNNNATC 1 cut(s) 864
BseLI CCNNNNNNNGG 9 cut(s) 116, 235, 1189, 1206, 2148, 2149, 2252, 2402, 2636
BseMI GCAATG 2 cut(s) 1584, 2858
BseMII CTCAG 8 cut(s) 332, 785, 1110, 1683, 2061, 2138, 2460, 2496
BseNI ACTGG 6 cut(s) 177, 658, 1115, 1783, 2028, 2699
BseRI GAGGAG 1 cut(s) 1082
BseSI GKGCMC 2 cut(s) 2426, 2753
BseXI GCAGC 3 cut(s) 475, 1205, 1347
BseYI CCCAGC 2 cut(s) 2233, 2406
BshFI GGCC 9 cut(s) 1023, 1083, 1177, 1280, 2475, 2620, 2648, 2751, 2786
BshNI GGYRCC 1 cut(s) 1808
BshTI ACCGGT 1 cut(s) 1976
BsiHKAI GWGCWC 3 cut(s) 1055, 1698, 2426
BsiHKCI CYCGRG 1 cut(s) 2746
BsiSI CCGG 7 cut(s) 299, 659, 1190, 1559, 1616, 1677, 1977
BslFI GGGAC 3 cut(s) 32, 647, 2725
BslI CCNNNNNNNGG 9 cut(s) 116, 235, 1189, 1206, 2148, 2149, 2252, 2402, 2636
BsmAI GTCTC 8 cut(s) 200, 285, 339, 362, 1490, 1714, 2107, 2707
BsmBI CGTCTC 1 cut(s) 200
BsmFI GGGAC 3 cut(s) 32, 647, 2725
BsmI GAATGC 1 cut(s) 904
BsnI GGCC 9 cut(s) 1023, 1083, 1177, 1280, 2475, 2620, 2648, 2751, 2786
Bso31I GGTCTC 2 cut(s) 362, 1714
BsoBI CYCGRG 1 cut(s) 2746
Bsp120I GGGCCC 1 cut(s) 2749
Bsp1286I GDGCHC 4 cut(s) 1055, 1698, 2426, 2753
Bsp13I TCCGGA 1 cut(s) 1558
Bsp1720I GCTNAGC 1 cut(s) 1692
Bsp19I CCATGG 3 cut(s) 234, 1171, 1597
BspACI CCGC 4 cut(s) 1582, 2184, 2627, 2867
BspANI GGCC 9 cut(s) 1023, 1083, 1177, 1280, 2475, 2620, 2648, 2751, 2786
BspCNI CTCAG 8 cut(s) 333, 786, 1109, 1684, 2060, 2139, 2459, 2497
BspEI TCCGGA 1 cut(s) 1558
BspT107I GGYRCC 1 cut(s) 1808
BspTI CTTAAG 1 cut(s) 967
BspTNI GGTCTC 2 cut(s) 362, 1714
BsrDI GCAATG 2 cut(s) 1584, 2858
BsrFI RCCGGY 3 cut(s) 1189, 1676, 1976
BsrI ACTGG 6 cut(s) 177, 658, 1115, 1783, 2028, 2699
BssAI RCCGGY 3 cut(s) 1189, 1676, 1976
BssECI CCNNGG 8 cut(s) 234, 352, 1078, 1127, 1171, 1250, 1466, 1597
BssT1I CCWWGG 6 cut(s) 234, 352, 1078, 1127, 1171, 1597
Bst2UI CCWGG 3 cut(s) 1251, 2525, 2876
Bst6I CTCTTC 3 cut(s) 28, 1278, 1560
BstAFI CTTAAG 1 cut(s) 967
BstC8I GCNNGC 5 cut(s) 493, 1713, 1762, 1949, 2865
BstDSI CCRYGG 3 cut(s) 234, 1171, 1597
BstF5I GGATG 9 cut(s) 487, 1044, 1157, 1196, 1431, 2359, 2694, 2829, 2884
BstH2I RGCGCY 1 cut(s) 2075
BstHHI GCGC 1 cut(s) 2074
BstMAI GTCTC 8 cut(s) 200, 285, 339, 362, 1490, 1714, 2107, 2707
BstMWI GCNNNNNNNGC 3 cut(s) 1286, 1948, 2626
BstNI CCWGG 3 cut(s) 1251, 2525, 2876
BstNSI RCATGY 3 cut(s) 495, 1168, 1715
BstSCI CCNGG 4 cut(s) 297, 1249, 2523, 2874
BstSLI GKGCMC 2 cut(s) 2426, 2753
BstV1I GCAGC 3 cut(s) 475, 1205, 1347
BstV2I GAAGAC 1 cut(s) 2268
BstX2I RGATCY 8 cut(s) 143, 1254, 1983, 2011, 2055, 2197, 2567, 2690
BstYI RGATCY 8 cut(s) 143, 1254, 1983, 2011, 2055, 2197, 2567, 2690
BsuI GTATCC 1 cut(s) 2309
BsuRI GGCC 9 cut(s) 1023, 1083, 1177, 1280, 2475, 2620, 2648, 2751, 2786
BtgI CCRYGG 3 cut(s) 234, 1171, 1597
BtsCI GGATG 9 cut(s) 487, 1044, 1157, 1196, 1431, 2359, 2694, 2829, 2884
BtsI GCAGTG 2 cut(s) 2163, 2439
Cac8I GCNNGC 5 cut(s) 493, 1713, 1762, 1949, 2865
CfoI GCGC 1 cut(s) 2074
Cfr10I RCCGGY 3 cut(s) 1189, 1676, 1976
CseI GACGC 2 cut(s) 729, 1278
CsiI ACCWGGT 1 cut(s) 2523
Csp6I GTAC 6 cut(s) 801, 997, 1028, 1750, 2229, 2870
CspAI ACCGGT 1 cut(s) 1976
CspCI CAANNNNNGTGG 4 cut(s) 1288, 1323, 2803, 2838
CviQI GTAC 6 cut(s) 801, 997, 1028, 1750, 2229, 2870
DraIII CACNNNGTG 1 cut(s) 2192
EaeI YGGCCR 4 cut(s) 1021, 1081, 2646, 2784
Eam1104I CTCTTC 3 cut(s) 28, 1278, 1560
EarI CTCTTC 3 cut(s) 28, 1278, 1560
EciI GGCGGA 1 cut(s) 2616
Ecl136II GAGCTC 1 cut(s) 1053
Eco130I CCWWGG 6 cut(s) 234, 352, 1078, 1127, 1171, 1597
Eco24I GRGCYC 2 cut(s) 1055, 2753
Eco31I GGTCTC 2 cut(s) 362, 1714
Eco32I GATATC 3 cut(s) 974, 1885, 2491
Eco47I GGWCC 7 cut(s) 581, 656, 661, 2026, 2123, 2277, 2546
Eco47III AGCGCT 1 cut(s) 2073
Eco53kI GAGCTC 1 cut(s) 1053
Eco57I CTGAAG 4 cut(s) 667, 764, 1288, 2669
Eco88I CYCGRG 1 cut(s) 2746
EcoICRI GAGCTC 1 cut(s) 1053
EcoO109I RGGNCCY 1 cut(s) 2123
EcoRI GAATTC 1 cut(s) 2093
EcoRII CCWGG 3 cut(s) 1249, 2523, 2874
EcoRV GATATC 3 cut(s) 974, 1885, 2491
EcoT14I CCWWGG 6 cut(s) 234, 352, 1078, 1127, 1171, 1597
EcoT38I GRGCYC 2 cut(s) 1055, 2753
ErhI CCWWGG 6 cut(s) 234, 352, 1078, 1127, 1171, 1597
Esp3I CGTCTC 1 cut(s) 200
FaqI GGGAC 3 cut(s) 32, 647, 2725
FauNDI CATATG 1 cut(s) 2170
FbaI TGATCA 1 cut(s) 1003
FblI GTMKAC 1 cut(s) 394
Fnu4HI GCNGC 4 cut(s) 489, 1194, 1361, 1583
FokI GGATG 9 cut(s) 494, 1051, 1144, 1183, 1438, 2366, 2681, 2816, 2891
FriOI GRGCYC 2 cut(s) 1055, 2753
Fsp4HI GCNGC 4 cut(s) 489, 1194, 1361, 1583
GlaI GCGC 1 cut(s) 2073
GluI GCNGC 4 cut(s) 489, 1194, 1361, 1583
GsaI CCCAGC 2 cut(s) 2237, 2410
GsuI CTGGAG 1 cut(s) 1257
HaeII RGCGCY 1 cut(s) 2075
HaeIII GGCC 9 cut(s) 1023, 1083, 1177, 1280, 2475, 2620, 2648, 2751, 2786
HapII CCGG 7 cut(s) 299, 659, 1190, 1559, 1616, 1677, 1977
HgaI GACGC 2 cut(s) 729, 1278
HhaI GCGC 1 cut(s) 2074
Hin6I GCGC 1 cut(s) 2072
HinP1I GCGC 1 cut(s) 2072
HincII GTYRAC 1 cut(s) 395
HindII GTYRAC 1 cut(s) 395
HindIII AAGCTT 1 cut(s) 2681
HpaII CCGG 7 cut(s) 299, 659, 1190, 1559, 1616, 1677, 1977
HphI GGTGA 5 cut(s) 869, 1144, 1666, 1966, 2395
Hpy166II GTNNAC 5 cut(s) 395, 697, 719, 1135, 2424
Hpy8I GTNNAC 5 cut(s) 395, 697, 719, 1135, 2424
Hpy99I CGWCG 1 cut(s) 745
HpyCH4IV ACGT 2 cut(s) 1530, 1748
HpyF10VI GCNNNNNNNGC 3 cut(s) 1286, 1948, 2626
HpySE526I ACGT 2 cut(s) 1530, 1748
HspAI GCGC 1 cut(s) 2072
Kpn2I TCCGGA 1 cut(s) 1558
Ksp22I TGATCA 1 cut(s) 1003
LmnI GCTCC 1 cut(s) 1058
Lsp1109I GCAGC 3 cut(s) 475, 1205, 1347
LweI GCATC 9 cut(s) 929, 1205, 1276, 1416, 1479, 1773, 2445, 2548, 2838
MabI ACCWGGT 1 cut(s) 2523
MaeII ACGT 2 cut(s) 1530, 1748
MaeIII GTNAC 6 cut(s) 200, 301, 677, 1526, 2161, 2399
MfeI CAATTG 2 cut(s) 65, 1448
MflI RGATCY 8 cut(s) 143, 1254, 1983, 2011, 2055, 2197, 2567, 2690
MhlI GDGCHC 4 cut(s) 1055, 1698, 2426, 2753
MlsI TGGCCA 4 cut(s) 1023, 1083, 2648, 2786
MluNI TGGCCA 4 cut(s) 1023, 1083, 2648, 2786
MlyI GAGTC 2 cut(s) 390, 1447
MmeI TCCRAC 3 cut(s) 459, 1185, 2824
Mox20I TGGCCA 4 cut(s) 1023, 1083, 2648, 2786
MroI TCCGGA 1 cut(s) 1558
MroXI GAANNNNTTC 2 cut(s) 189, 1070
MscI TGGCCA 4 cut(s) 1023, 1083, 2648, 2786
MslI CAYNNNNRTG 1 cut(s) 2928
Msp20I TGGCCA 4 cut(s) 1023, 1083, 2648, 2786
MspA1I CMGCKG 1 cut(s) 793
MspCI CTTAAG 1 cut(s) 967
MspI CCGG 7 cut(s) 299, 659, 1190, 1559, 1616, 1677, 1977
MspR9I CCNGG 4 cut(s) 299, 1251, 2525, 2876
MunI CAATTG 2 cut(s) 65, 1448
Mva1269I GAATGC 1 cut(s) 904
MvaI CCWGG 3 cut(s) 1251, 2525, 2876
MwoI GCNNNNNNNGC 3 cut(s) 1286, 1948, 2626
NciI CCSGG 1 cut(s) 299
NcoI CCATGG 3 cut(s) 234, 1171, 1597
NdeI CATATG 1 cut(s) 2170
NmuCI GTSAC 3 cut(s) 1526, 2161, 2399
NspI RCATGY 3 cut(s) 495, 1168, 1715
PaeI GCATGC 2 cut(s) 495, 1715
PciI ACATGT 1 cut(s) 1164
PctI GAATGC 1 cut(s) 904
PdmI GAANNNNTTC 2 cut(s) 189, 1070
PflMI CCANNNNNTGG 2 cut(s) 235, 2252
PinAI ACCGGT 1 cut(s) 1976
PkrI GCNGC 4 cut(s) 490, 1195, 1362, 1584
PleI GAGTC 2 cut(s) 390, 1446
PpsI GAGTC 2 cut(s) 390, 1446
PpuMI RGGWCCY 1 cut(s) 2123
PscI ACATGT 1 cut(s) 1164
PshBI ATTAAT 1 cut(s) 462
Psp124BI GAGCTC 1 cut(s) 1055
Psp5II RGGWCCY 1 cut(s) 2123
Psp6I CCWGG 3 cut(s) 1249, 2523, 2874
PspFI CCCAGC 2 cut(s) 2233, 2406
PspGI CCWGG 3 cut(s) 1249, 2523, 2874
PspOMI GGGCCC 1 cut(s) 2749
PspPPI RGGWCCY 1 cut(s) 2123
PsuI RGATCY 8 cut(s) 143, 1254, 1983, 2011, 2055, 2197, 2567, 2690
PvuII CAGCTG 1 cut(s) 793
RsaI GTAC 6 cut(s) 802, 998, 1029, 1751, 2230, 2871
RsaNI GTAC 6 cut(s) 801, 997, 1028, 1750, 2229, 2870
RseI CAYNNNNRTG 1 cut(s) 2928
SacI GAGCTC 1 cut(s) 1055
SalI GTCGAC 1 cut(s) 393
SatI GCNGC 4 cut(s) 489, 1194, 1361, 1583
SchI GAGTC 2 cut(s) 390, 1447
ScrFI CCNGG 4 cut(s) 299, 1251, 2525, 2876
SduI GDGCHC 4 cut(s) 1055, 1698, 2426, 2753
SexAI ACCWGGT 1 cut(s) 2523
SfaNI GCATC 9 cut(s) 929, 1205, 1276, 1416, 1479, 1773, 2445, 2548, 2838
SgrAI CRCCGGYG 1 cut(s) 1676
SinI GGWCC 7 cut(s) 581, 656, 661, 2026, 2123, 2277, 2546
SmiMI CAYNNNNRTG 1 cut(s) 2928
SmlI CTYRAG 5 cut(s) 764, 967, 1420, 1493, 1522
SmoI CTYRAG 5 cut(s) 764, 967, 1420, 1493, 1522
SphI GCATGC 2 cut(s) 495, 1715
SsiI CCGC 4 cut(s) 1582, 2184, 2627, 2867
SstI GAGCTC 1 cut(s) 1055
StyD4I CCNGG 4 cut(s) 297, 1249, 2523, 2874
StyI CCWWGG 6 cut(s) 234, 352, 1078, 1127, 1171, 1597
TaiI ACGT 2 cut(s) 1533, 1751
TaqI TCGA 7 cut(s) 15, 218, 394, 849, 2016, 2493, 2764
TauI GCSGC 1 cut(s) 1585
TseFI GTSAC 3 cut(s) 1526, 2161, 2399
TseI GCWGC 3 cut(s) 488, 1193, 1360
Tsp45I GTSAC 3 cut(s) 1526, 2161, 2399
TspGWI ACGGA 5 cut(s) 19, 188, 877, 2190, 2334
Van91I CCANNNNNTGG 2 cut(s) 235, 2252
Vha464I CTTAAG 1 cut(s) 967
VneI GTGCAC 1 cut(s) 2422
VpaK11BI GGWCC 7 cut(s) 581, 656, 661, 2026, 2123, 2277, 2546
VspI ATTAAT 1 cut(s) 462
XbaI TCTAGA 2 cut(s) 181, 553
XceI RCATGY 3 cut(s) 495, 1168, 1715
XcmI CCANNNNNNNNNTGG 2 cut(s) 359, 2641
XmiI GTMKAC 1 cut(s) 394
XmnI GAANNNNTTC 2 cut(s) 189, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.