RLG00000037035

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
87717146 .. 87719789
2644 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000037035

Sequence Viewer

Length: 2352 bp
ATGTTTATCCTTTCAAAACTTGTCTTGCCACATCTTGTGGTGGCCGACTCTTTGCAGTCATATTCTCCTCATTGTCATGATGACGAGATCTCTGCCTTGCTGCAATTCAAGCAAAGTTTTGTCATTAACATGTCTGCTTCATGTTATGAGGGTGCTTATCCAAAGATTTCTTCATGGAAATCAAACAGCAATTGTTGCTCATGGGACGGGGTCGAGTGTGATGCGGAGACTCGTCATGTGATTGGACTTGATTTTAGTAGCAGTCGTCTCTATGGCTCTATCAACTCCAACAGCACCCTCTTCCAGCTTGTTCATCTTGAGAGCCTCAACCTTGCTGACAATGATTTCAATTCCTCTCAAATTCCTCCTACTATTAGGAATTTTCCAAAGCTCAGACATCTTATCCTTTTGGACCTTACAGCTAATGAGTTCAATGGCCAAATTCCCTCTTCATTTGCGAATCTTACCCAACTCACATATTTTTCACTTTGGGGGAACCAAATTAACGGCACTATCCCATGTTTTTTTGGAAATCTTACCCAGCTCGCAACACTTCGTCTTAATTCAAATCAATTATCTGGTCCAATCCCATCTAGTCTAGGTAATCTTGGCAAACTTACTGTTCTAGGTCTTAATTTCAATAAATTTCAGAGAGAGATTCCTGAGTCATTATTCAATGTAGCAAGTCTCAAGAGACTTCTTCTGGCTTATAATAATCTCGGTGGTACAGTGGAGTTCCTCAAACTTCTTAAGCTACCAAATTTAAAGTGGGTAGATCTATCCGGTAACAACTTGGATGTGATCTCTGAAACCAGAAGTATGAATGCATCTGGGATTCCAAGGTTAGAGTATGTAGGATTGGGTTCATGCAACATAAGAGAGTTCCCAAATTTTCTACGATATCAAGATACATTACGGTACTTGAACCTTTCTTGGAACGGAATGCATGGCCAAGTACCAAAATGGATGTGGAACACAAGCGCAGAGTCTTTGGGGGTTTTGGACATTTCTCATAACCTCCTTTCAGGCTTTGACCAGCCTCCGGTTGTCGTTCCCTGGGTTGAACTAGATGGGCTAGATCTTTCGTTCAACAGGCTTAGTGGGCCATTGTTGATACCTTCGTTACAATCCGTGAAATTCTATCACATTTCAAACAACAAATTGACTGGAGAAATTTCACCTTTGATTTGTAATGCGAGTTCTCTTTTGTCCCTTGATGTGTCAAATAACCATTTGAGTGGTATGCTTCCGCGGTGTCTCGGAAACTTCAGTATTGATCTTGAATTTTTAAGCGTTGGAAACAACTATTTTCATGGCACCCTTCCTCATTTATGCCCCACCAATGGAAGCGATTTGAGAATGATTGATGTCAGTCGTAACCAACTGCAGGGGAAATTACCGAGGTCATTGGCGAATTGTTTGGGGCTCGAGTCTCTCGTTCTATCAAGCAATAAGTTCGATGATGTATTCCCCGTTTGGTTGGGAACTCTTCCAAAATTAAAAGTTTTGGCAATGAAGAATAGTGGGTTCCACGGTGCTATTCCGAGACATCAAAGCAATCATGATGGTTTCCCCAATTTGCGCATCCTTGATCTGTCTCAAAATAATTTTACCGGTCAATTTGCATTTGAATTCATCCTCTCTGGAAAATCAATGAGAGGTATCCATCGAAACGGATCGGAGTACATGACAGCAGTTGAATTCACGAGTTATGAACGTTGCAGATTAGAGTACTCAATCACGCTGATGAATAAAGGTTTAGAGAGATATTTCCAAAAGATTCACGAAGACTTTATGGCCATCGATCTGTCGAGCAATAGATTTGAAGGCAAGATTCCAGAATTTATTGGGAACCTAAAGGGGCTTCGCTCACTTAATGTATCCAGTAACATTCTAAGTGGCCGCATCCCACCATCCTTGGGAAACTTGACAAATCTTGAAGCTTTGGACCTTTCACATAACAACTTCTTGGGTGAGATCCCTCCATCACTGTTGCAGCTTTCATTCCTCCAAATTTTCAGCGTCTCGCACAACAATCTCACAGGTCAAATACCGGTTGGAAACCAGTTTAGTACCTTCGACATCACTTCCTATGAGGGCAACCCAGGTTTGTGTGGAGCTCCAATGCCAAAGAAATGTTCACGTCTTGAGGGGCCTGAACTTCCACCTTCAACAGCAGAAGAAGATGGAGTTGAATTGGATTGGAAATTTGTTGCGGCGGGGTTGGTCAGTGGGTTGCTGGTGGGAGTGGTTCTAGCAGACTTTGTGATCACGAGGTTCAGGGAGCGTCTCATTGAGATTGTTGCATTGCTGATCAGACTGATGAAAAGGATGAGAAGGCCCAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

784

Amino Acids

87.17

Weight (kDa)

6.68

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 74 2e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 96 - 283 2.5e-13 Leucine-rich repeat region
LRR_14 PF23598 160 - 337 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 600 - 656 6.8e-07 Leucine rich repeat
LRR_LRWD1 PF23211 620 - 705 3.4e-06 Leucine-rich repeat and WD repeat-containing protein 1, LRR
LRR_4 PF12799 621 - 662 7.8e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 711
Acc16I TGCGCA 1 cut(s) 1583
AccB1I GGYRCC 1 cut(s) 1316
AccII CGCG 1 cut(s) 1252
AciI CCGC 6 cut(s) 224, 1250, 1252, 1903, 2216, 2219
AclI AACGTT 1 cut(s) 1717
AclWI GGATC 2 cut(s) 1684, 1972
AcoI YGGCCR 5 cut(s) 42, 436, 949, 1797, 1900
AcuI CTGAAG 1 cut(s) 1252
AfaI GTAC 6 cut(s) 727, 920, 957, 1685, 1733, 2074
AfiI CCNNNNNNNGG 4 cut(s) 1042, 1343, 1387, 1919
AflII CTTAAG 1 cut(s) 749
AflIII ACRYGT 1 cut(s) 129
AgeI ACCGGT 2 cut(s) 1613, 2053
AjiI CACGTC 1 cut(s) 2144
AjnI CCWGG 2 cut(s) 1055, 2104
AjuI GAANNNNNNNTTGG 4 cut(s) 154, 186, 2122, 2154
AluBI AGCT 8 cut(s) 307, 391, 422, 544, 754, 1943, 1999, 2120
AluI AGCT 8 cut(s) 307, 391, 422, 544, 754, 1943, 1999, 2120
Alw21I GWGCWC 1 cut(s) 2122
AlwI GGATC 2 cut(s) 1684, 1972
Ama87I CYCGRG 1 cut(s) 1427
AoxI GGCC 8 cut(s) 42, 436, 949, 1103, 1797, 1900, 2153, 2339
ApeKI GCWGC 2 cut(s) 100, 1996
AsiGI ACCGGT 2 cut(s) 1613, 2053
AspLEI GCGC 2 cut(s) 983, 1584
AspS9I GGNCC 6 cut(s) 412, 581, 1103, 1948, 2153, 2340
AsuHPI GGTGA 2 cut(s) 1170, 1985
AvaI CYCGRG 1 cut(s) 1427
AvaII GGWCC 3 cut(s) 412, 581, 1948
BaeI ACNNNNGTAYC 2 cut(s) 1106, 1139
BalI TGGCCA 3 cut(s) 438, 951, 1799
BanI GGYRCC 1 cut(s) 1316
BanII GRGCYC 2 cut(s) 1428, 2122
BauI CACGAG 2 cut(s) 1705, 2272
BbsI GAAGAC 1 cut(s) 1794
Bbv12I GWGCWC 1 cut(s) 2122
BbvI GCAGC 2 cut(s) 87, 2008
BccI CCATC 8 cut(s) 598, 1064, 1559, 1674, 1808, 1921, 1993, 2180
BceAI ACGGC 1 cut(s) 523
BcgI CGANNNNNNTGC 6 cut(s) 74, 108, 203, 237, 1438, 1472
BciT130I CCWGG 2 cut(s) 1057, 2106
BciVI GTATCC 2 cut(s) 1673, 1891
BclI TGATCA 2 cut(s) 2268, 2313
BfaI CTAG 6 cut(s) 594, 599, 626, 1067, 1076, 2255
BfmI CTRYAG 1 cut(s) 1385
BfrI CTTAAG 1 cut(s) 749
BfuI GTATCC 2 cut(s) 1673, 1891
BglII AGATCT 3 cut(s) 87, 775, 1078
BisI GCNGC 4 cut(s) 101, 1903, 1997, 2217
BlsI GCNGC 4 cut(s) 102, 1904, 1998, 2218
BmcAI AGTACT 1 cut(s) 1733
Bme1390I CCNGG 2 cut(s) 1057, 2106
Bme18I GGWCC 3 cut(s) 412, 581, 1948
BmeT110I CYCGRG 1 cut(s) 1427
BmgBI CACGTC 1 cut(s) 2144
BmgT120I GGNCC 6 cut(s) 412, 581, 1103, 1948, 2153, 2340
BmiI GGNNCC 5 cut(s) 497, 1318, 1529, 1853, 2154
BmrFI CCNGG 2 cut(s) 1057, 2106
BmsI GCATC 4 cut(s) 211, 836, 1593, 1914
BpiI GAAGAC 1 cut(s) 1794
BpmI CTGGAG 1 cut(s) 1188
BpuEI CTTGAG 3 cut(s) 338, 674, 2168
Bsa29I ATCGAT 1 cut(s) 1803
BsaJI CCNNGG 8 cut(s) 839, 1055, 1056, 1250, 1400, 1531, 1917, 2104
BsaWI WCCGGW 4 cut(s) 782, 1042, 1613, 2053
Bsc4I CCNNNNNNNGG 4 cut(s) 1042, 1343, 1387, 1919
Bse118I RCCGGY 2 cut(s) 1613, 2053
Bse1I ACTGG 3 cut(s) 1171, 1884, 2065
Bse3DI GCAATG 2 cut(s) 1518, 2306
BseBI CCWGG 2 cut(s) 1057, 2106
BseCI ATCGAT 1 cut(s) 1803
BseDI CCNNGG 8 cut(s) 839, 1055, 1056, 1250, 1400, 1531, 1917, 2104
BseGI GGATG 7 cut(s) 802, 972, 1584, 1635, 1905, 1913, 2337
BseLI CCNNNNNNNGG 4 cut(s) 1042, 1343, 1387, 1919
BseMI GCAATG 2 cut(s) 1518, 2306
BseMII CTCAG 2 cut(s) 406, 654
BseNI ACTGG 3 cut(s) 1171, 1884, 2065
BseRI GAGGAG 1 cut(s) 57
BseXI GCAGC 2 cut(s) 87, 2008
BseYI CCCAGC 1 cut(s) 540
Bsh1236I CGCG 1 cut(s) 1252
BshFI GGCC 8 cut(s) 44, 438, 951, 1105, 1799, 1902, 2155, 2341
BshNI GGYRCC 1 cut(s) 1316
BshTI ACCGGT 2 cut(s) 1613, 2053
BshVI ATCGAT 1 cut(s) 1803
BsiHKAI GWGCWC 1 cut(s) 2122
BsiHKCI CYCGRG 1 cut(s) 1427
BsiSI CCGG 4 cut(s) 783, 1043, 1614, 2054
BslFI GGGAC 2 cut(s) 218, 1195
BslI CCNNNNNNNGG 4 cut(s) 1042, 1343, 1387, 1919
BsmBI CGTCTC 3 cut(s) 272, 2029, 2294
BsmFI GGGAC 2 cut(s) 218, 1195
BsmI GAATGC 2 cut(s) 829, 948
BsnI GGCC 8 cut(s) 44, 438, 951, 1105, 1799, 1902, 2155, 2341
BsoBI CYCGRG 1 cut(s) 1427
Bsp1286I GDGCHC 2 cut(s) 1428, 2122
BspACI CCGC 6 cut(s) 224, 1250, 1252, 1903, 2216, 2219
BspANI GGCC 8 cut(s) 44, 438, 951, 1105, 1799, 1902, 2155, 2341
BspCNI CTCAG 2 cut(s) 405, 655
BspDI ATCGAT 1 cut(s) 1803
BspFNI CGCG 1 cut(s) 1252
BspHI TCATGA 2 cut(s) 76, 1561
BspLI GGNNCC 5 cut(s) 497, 1318, 1529, 1853, 2154
BspMAI CTGCAG 1 cut(s) 1389
BspPI GGATC 2 cut(s) 1684, 1972
BspT107I GGYRCC 1 cut(s) 1316
BspTI CTTAAG 1 cut(s) 749
BsrDI GCAATG 2 cut(s) 1518, 2306
BsrFI RCCGGY 2 cut(s) 1613, 2053
BsrI ACTGG 3 cut(s) 1171, 1884, 2065
BssAI RCCGGY 2 cut(s) 1613, 2053
BssECI CCNNGG 8 cut(s) 839, 1055, 1056, 1250, 1400, 1531, 1917, 2104
BssSI CACGAG 2 cut(s) 1705, 2272
BssT1I CCWWGG 2 cut(s) 839, 1917
Bst2BI CACGAG 2 cut(s) 1705, 2272
Bst2UI CCWGG 2 cut(s) 1057, 2106
Bst4CI ACNGT 5 cut(s) 622, 730, 918, 1535, 1992
Bst6I CTCTTC 3 cut(s) 305, 454, 1494
BstAFI CTTAAG 1 cut(s) 749
BstAPI GCANNNNNTGC 1 cut(s) 195
BstC8I GCNNGC 1 cut(s) 546
BstDEI CTNAG 4 cut(s) 392, 663, 1097, 1895
BstDSI CCRYGG 2 cut(s) 1250, 1531
BstF5I GGATG 7 cut(s) 802, 972, 1584, 1635, 1905, 1913, 2337
BstFNI CGCG 1 cut(s) 1252
BstHHI GCGC 2 cut(s) 983, 1584
BstMWI GCNNNNNNNGC 3 cut(s) 109, 195, 1102
BstNI CCWGG 2 cut(s) 1057, 2106
BstNSI RCATGY 1 cut(s) 133
BstSCI CCNGG 2 cut(s) 1055, 2104
BstSFI CTRYAG 1 cut(s) 1385
BstUI CGCG 1 cut(s) 1252
BstV1I GCAGC 2 cut(s) 87, 2008
BstV2I GAAGAC 1 cut(s) 1794
BstX2I RGATCY 4 cut(s) 87, 775, 1078, 1977
BstXI CCANNNNNNTGG 1 cut(s) 1238
BstYI RGATCY 4 cut(s) 87, 775, 1078, 1977
Bsu15I ATCGAT 1 cut(s) 1803
BsuI GTATCC 2 cut(s) 1673, 1891
BsuRI GGCC 8 cut(s) 44, 438, 951, 1105, 1799, 1902, 2155, 2341
BsuTUI ATCGAT 1 cut(s) 1803
BtgI CCRYGG 2 cut(s) 1250, 1531
BtrI CACGTC 1 cut(s) 2144
BtsCI GGATG 7 cut(s) 802, 972, 1584, 1635, 1905, 1913, 2337
BtsIMutI CAGTG 3 cut(s) 735, 1988, 2236
Cac8I GCNNGC 1 cut(s) 546
CciI TCATGA 2 cut(s) 76, 1561
CfoI GCGC 2 cut(s) 983, 1584
Cfr10I RCCGGY 2 cut(s) 1613, 2053
Cfr13I GGNCC 6 cut(s) 412, 581, 1103, 1948, 2153, 2340
Cfr42I CCGCGG 1 cut(s) 1253
ClaI ATCGAT 1 cut(s) 1803
CseI GACGC 2 cut(s) 2011, 2276
Csp6I GTAC 6 cut(s) 726, 919, 956, 1684, 1732, 2073
CspAI ACCGGT 2 cut(s) 1613, 2053
CspCI CAANNNNNGTGG 2 cut(s) 1899, 1934
CviQI GTAC 6 cut(s) 726, 919, 956, 1684, 1732, 2073
DdeI CTNAG 4 cut(s) 392, 663, 1097, 1895
DraI TTTAAA 1 cut(s) 765
EaeI YGGCCR 5 cut(s) 42, 436, 949, 1797, 1900
Eam1104I CTCTTC 3 cut(s) 305, 454, 1494
EarI CTCTTC 3 cut(s) 305, 454, 1494
Ecl136II GAGCTC 1 cut(s) 2120
Eco130I CCWWGG 2 cut(s) 839, 1917
Eco24I GRGCYC 2 cut(s) 1428, 2122
Eco32I GATATC 1 cut(s) 902
Eco47I GGWCC 3 cut(s) 412, 581, 1948
Eco53kI GAGCTC 1 cut(s) 2120
Eco57I CTGAAG 1 cut(s) 1252
Eco88I CYCGRG 1 cut(s) 1427
EcoICRI GAGCTC 1 cut(s) 2120
EcoO109I RGGNCCY 1 cut(s) 2153
EcoRI GAATTC 2 cut(s) 1631, 1700
EcoRII CCWGG 2 cut(s) 1055, 2104
EcoRV GATATC 1 cut(s) 902
EcoT14I CCWWGG 2 cut(s) 839, 1917
EcoT22I ATGCAT 2 cut(s) 829, 948
EcoT38I GRGCYC 2 cut(s) 1428, 2122
ErhI CCWWGG 2 cut(s) 839, 1917
Esp3I CGTCTC 3 cut(s) 272, 2029, 2294
FaqI GGGAC 2 cut(s) 218, 1195
FauI CCCGC 1 cut(s) 2212
FbaI TGATCA 2 cut(s) 2268, 2313
Fnu4HI GCNGC 4 cut(s) 101, 1903, 1997, 2217
FokI GGATG 7 cut(s) 809, 979, 1571, 1622, 1892, 1900, 2344
FriOI GRGCYC 2 cut(s) 1428, 2122
Fsp4HI GCNGC 4 cut(s) 101, 1903, 1997, 2217
FspBI CTAG 6 cut(s) 594, 599, 626, 1067, 1076, 2255
FspI TGCGCA 1 cut(s) 1583
GlaI GCGC 2 cut(s) 982, 1583
GluI GCNGC 4 cut(s) 101, 1903, 1997, 2217
GsaI CCCAGC 1 cut(s) 544
GsuI CTGGAG 1 cut(s) 1188
HaeIII GGCC 8 cut(s) 44, 438, 951, 1105, 1799, 1902, 2155, 2341
HapII CCGG 4 cut(s) 783, 1043, 1614, 2054
HgaI GACGC 2 cut(s) 2011, 2276
HhaI GCGC 2 cut(s) 983, 1584
Hin6I GCGC 2 cut(s) 981, 1582
HinP1I GCGC 2 cut(s) 981, 1582
HindIII AAGCTT 1 cut(s) 1941
HpaII CCGG 4 cut(s) 783, 1043, 1614, 2054
HphI GGTGA 2 cut(s) 1170, 1985
Hpy166II GTNNAC 1 cut(s) 2141
Hpy188I TCNGA 7 cut(s) 395, 651, 808, 1262, 1545, 1681, 2318
Hpy8I GTNNAC 1 cut(s) 2141
HpyAV CCTTC 6 cut(s) 1128, 1331, 1820, 2086, 2178, 2331
HpyCH4III ACNGT 5 cut(s) 622, 730, 918, 1535, 1992
HpyCH4IV ACGT 2 cut(s) 1717, 2143
HpyF10VI GCNNNNNNNGC 3 cut(s) 109, 195, 1102
HpyF3I CTNAG 4 cut(s) 392, 663, 1097, 1895
HpySE526I ACGT 2 cut(s) 1717, 2143
HspAI GCGC 2 cut(s) 981, 1582
Ksp22I TGATCA 2 cut(s) 2268, 2313
KspI CCGCGG 1 cut(s) 1253
LmnI GCTCC 3 cut(s) 2117, 2125, 2284
Lsp1109I GCAGC 2 cut(s) 87, 2008
LweI GCATC 4 cut(s) 211, 836, 1593, 1914
MaeI CTAG 6 cut(s) 594, 599, 626, 1067, 1076, 2255
MaeII ACGT 2 cut(s) 1717, 2143
MaeIII GTNAC 4 cut(s) 785, 1122, 1376, 1886
MboII GAAGA 9 cut(s) 162, 292, 441, 692, 1481, 1528, 1799, 2192, 2195
MfeI CAATTG 1 cut(s) 190
MflI RGATCY 4 cut(s) 87, 775, 1078, 1977
MhlI GDGCHC 2 cut(s) 1428, 2122
MlsI TGGCCA 3 cut(s) 438, 951, 1799
MluNI TGGCCA 3 cut(s) 438, 951, 1799
MlyI GAGTC 5 cut(s) 41, 223, 674, 995, 1439
MmeI TCCRAC 3 cut(s) 312, 1276, 2038
Mox20I TGGCCA 3 cut(s) 438, 951, 1799
Mph1103I ATGCAT 2 cut(s) 829, 948
MscI TGGCCA 3 cut(s) 438, 951, 1799
MseI TTAA 9 cut(s) 126, 504, 561, 633, 750, 764, 1289, 1499, 1875
MslI CAYNNNNRTG 4 cut(s) 75, 128, 1236, 1745
Msp20I TGGCCA 3 cut(s) 438, 951, 1799
MspA1I CMGCKG 1 cut(s) 1252
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 4 cut(s) 783, 1043, 1614, 2054
MspR9I CCNGG 2 cut(s) 1057, 2106
MunI CAATTG 1 cut(s) 190
Mva1269I GAATGC 2 cut(s) 829, 948
MvaI CCWGG 2 cut(s) 1057, 2106
MvnI CGCG 1 cut(s) 1252
MwoI GCNNNNNNNGC 3 cut(s) 109, 195, 1102
NlaIV GGNNCC 5 cut(s) 497, 1318, 1529, 1853, 2154
NsbI TGCGCA 1 cut(s) 1583
NsiI ATGCAT 2 cut(s) 829, 948
NspI RCATGY 1 cut(s) 133
PaeR7I CTCGAG 1 cut(s) 1427
PagI TCATGA 2 cut(s) 76, 1561
PasI CCCWGGG 1 cut(s) 1056
PciI ACATGT 1 cut(s) 129
PcsI WCGNNNNNNNCGW 1 cut(s) 1434
PctI GAATGC 2 cut(s) 829, 948
PfeI GAWTC 5 cut(s) 460, 658, 835, 1780, 1834
PflFI GACNNNGTC 1 cut(s) 209
PinAI ACCGGT 2 cut(s) 1613, 2053
PkrI GCNGC 4 cut(s) 102, 1904, 1998, 2218
PleI GAGTC 5 cut(s) 41, 223, 673, 994, 1438
PpsI GAGTC 5 cut(s) 41, 223, 673, 994, 1438
PscI ACATGT 1 cut(s) 129
PsiI TTATAA 1 cut(s) 711
Psp124BI GAGCTC 1 cut(s) 2122
Psp1406I AACGTT 1 cut(s) 1717
Psp6I CCWGG 2 cut(s) 1055, 2104
PspFI CCCAGC 1 cut(s) 540
PspGI CCWGG 2 cut(s) 1055, 2104
PspN4I GGNNCC 5 cut(s) 497, 1318, 1529, 1853, 2154
PspPI GGNCC 6 cut(s) 412, 581, 1103, 1948, 2153, 2340
PspXI VCTCGAGB 1 cut(s) 1427
PsrI GAACNNNNNNTAC 2 cut(s) 1183, 1215
PstI CTGCAG 1 cut(s) 1389
PsuI RGATCY 4 cut(s) 87, 775, 1078, 1977
PsyI GACNNNGTC 1 cut(s) 209
RsaI GTAC 6 cut(s) 727, 920, 957, 1685, 1733, 2074
RsaNI GTAC 6 cut(s) 726, 919, 956, 1684, 1732, 2073
RseI CAYNNNNRTG 4 cut(s) 75, 128, 1236, 1745
SacI GAGCTC 1 cut(s) 2122
SacII CCGCGG 1 cut(s) 1253
SaqAI TTAA 9 cut(s) 126, 504, 561, 633, 750, 764, 1289, 1499, 1875
SatI GCNGC 4 cut(s) 101, 1903, 1997, 2217
Sau96I GGNCC 6 cut(s) 412, 581, 1103, 1948, 2153, 2340
ScaI AGTACT 1 cut(s) 1733
SchI GAGTC 5 cut(s) 41, 223, 674, 995, 1439
ScrFI CCNGG 2 cut(s) 1057, 2106
SduI GDGCHC 2 cut(s) 1428, 2122
SfaNI GCATC 4 cut(s) 211, 836, 1593, 1914
SfcI CTRYAG 1 cut(s) 1385
Sfr274I CTCGAG 1 cut(s) 1427
Sfr303I CCGCGG 1 cut(s) 1253
SgrBI CCGCGG 1 cut(s) 1253
SinI GGWCC 3 cut(s) 412, 581, 1948
SlaI CTCGAG 1 cut(s) 1427
SmiMI CAYNNNNRTG 4 cut(s) 75, 128, 1236, 1745
SmlI CTYRAG 5 cut(s) 317, 689, 749, 1427, 2147
SmoI CTYRAG 5 cut(s) 317, 689, 749, 1427, 2147
SsiI CCGC 6 cut(s) 224, 1250, 1252, 1903, 2216, 2219
SspMI CTAG 6 cut(s) 594, 599, 626, 1067, 1076, 2255
SstI GAGCTC 1 cut(s) 2122
StyD4I CCNGG 2 cut(s) 1055, 2104
StyI CCWWGG 2 cut(s) 839, 1917
TaaI ACNGT 5 cut(s) 622, 730, 918, 1535, 1992
TaiI ACGT 2 cut(s) 1720, 2146
TaqI TCGA 7 cut(s) 213, 1428, 1458, 1669, 1803, 1811, 2079
TatI WGTACW 2 cut(s) 1683, 1731
TauI GCSGC 2 cut(s) 1905, 2219
TfiI GAWTC 5 cut(s) 460, 658, 835, 1780, 1834
Tru1I TTAA 9 cut(s) 126, 504, 561, 633, 750, 764, 1289, 1499, 1875
Tru9I TTAA 9 cut(s) 126, 504, 561, 633, 750, 764, 1289, 1499, 1875
TscAI CASTG 3 cut(s) 735, 1995, 2236
TseI GCWGC 2 cut(s) 100, 1996
TspGWI ACGGA 3 cut(s) 954, 1120, 1689
TspRI CASTG 3 cut(s) 735, 1995, 2236
Tth111I GACNNNGTC 1 cut(s) 209
Vha464I CTTAAG 1 cut(s) 749
VpaK11BI GGWCC 3 cut(s) 412, 581, 1948
XceI RCATGY 1 cut(s) 133
XcmI CCANNNNNNNNNTGG 2 cut(s) 765, 966
XhoI CTCGAG 1 cut(s) 1427
XspI CTAG 6 cut(s) 594, 599, 626, 1067, 1076, 2255
ZrmI AGTACT 1 cut(s) 1733
Zsp2I ATGCAT 2 cut(s) 829, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.