Rorug05G0484800

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
66827501 .. 66832851
5351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0484800.1

Sequence Viewer

Length: 2805 bp
ATGGATGGGCGTTTTGAGCCCACAAGGAATTTTGATGACCAACAATCTCTAGGAACAAGTGGAAACACATTGCGCCAAGCAAACCGAAGTTTGAATCCACAATCCAAGTTCAAATCAGAAAAGCCTAGTTTGTCCTATGCTGATCTCCATCATGAAATTACAAAAAATGTTAAAGATGTCTCACCCATGTCCGATGGGAACCGCCAAAAGCAACGTATTAATAGAAAGACAACTGAAGTCGATGAACTTGTCAAGTATATGTCAAAGTTGCCAAGTTATCTTGAGAGAGGAAAAAACCTCCAGGAGAAAGCTTTAAATGTTGGAGTTCTTGACTGGGGGCGCCTTGAAAAATGGCAGTATAGCCATAAACAGATGCCATACAGAAGTAGCCGGTATTCACCATCCAGTAGTAATACAACCTCATGCTTTTCCACAGATGAATCATCAACCCATTCTAGCAGAGGTCACAGCTGTTCTCCTGCTCGTCTTAGGATGCACCGTCCTTCCCTCCAATCTCATTTCGTGACTTCTCCACTGGAAGGGCCTTCTGAAGTTGTCAACTCCTTTAGAGAAAGTGTTGGAAAGTTTCAGGATCTTAAAGCTGACCAGAGTAACAACCTGAATGGAGTCATTAGACCAGATAAGTCTTTCTGCAACAATCATATAGACATCAAGGTGGCACAGTGCAAGAGAAAAGATTCAGACCCAAAGACTGAGCCAGAAAAAGGACATTTGCGGAATGGCTTGCAGTATGAGATGGCAGCAACAAATTTAAGGGTAAAGAAAAACACTCGAGATGGTGAGTTTCCAAAGAAAGTAGATAAGCAGCAGCCATTTTCAGAAAATTTTGAACTAGATACCCCTGAAGGTTGCAGTAAAGTTGTTCTGCTTTTGCCTGGAGATCTTCCTGAAAGAAATCATTCTGGGTCGGGGCTTTCCGACATTTCTGATTCGGAAACACTGCTTGGTCAAAGAGCTGCAGAAACAACTCGACGAAGCTTGCCAGAGAGACCCAAGGAGGCCTGTCTTGCAGAGCTCAATTCTGGTCTCCCCCACTCCTGCCGTTTTCCTTCTGAAGTTGATCGTAAACACTTCAGGGTAAAACAACTCGGCTCCACAGGTGCAGCAAGTGGCAGCTTTCAGTGTAATACACTTGGCTCAGCATCACAGTTGGCTCTAAGTTCCTCAACAAGAATGAGCCCATCCAGAGACAGAATTGTTGAAGACAAAAAAACAACAGGAGTATCAACATCTTCAACTGTAAATGAGCCTCATAGAGGATCAGAATTAAAGCGAGGCAAAGTAACTGCTGAAAAAGTGAGAAGCTCATCACCTTTCCGCCGATTAAGCATTGCTGTGGGTAAGATGAGTAAAACTTCCGGTTCTAAAGATTCTTCAGATGTACAACAGCCTAGGTCAACAACTTTCCAGGCTAGACCTGGTTCGGGGAACAACGTGGCTTCCGCTTTCTTGGATACTTCAGACACTGATAATTCTAATGCCACTAGCAGAGCGAGGTCCAGCCCGCTGAGGAGGTTACTGGATCCACTGCTGAAGCCAAAGGTAGCCAACTGCCATCATTCAGCGGAGCCATTGGAGAAAGATTCCATATCAACAAATAAGGCTTGTAAATCATCTAAGGGGCGAGTGGAATCTTTGTCTGAGCAGCCAGGGAAAGTAAAGCTAGGCATGACTGGTTGTAGGGAAACTAACGTCAGTGAGTTCTCTAAGGATAGGAAGAATAGGCCATCAACAGTTCAAGCTCTTCTACGAGTTGCGGTTAAAAATGGCCTGCCCCTGTTCACATTTGCAGTCCACAATGACATTGACATTCTTGCTGCCACAATGAAGAAGTTGAATACCTCAGGAAAGGGTGACTGCAGTTGTATCTACACATTCTTCAGTGTGCGGGAAGTCAAGAAAAAGAATGGAACTTGGCTGAATCATGGAAGCAAAGGCAAAGCTCATGAATACATTCGTAATGTTGTTGCTCAAATGAAGGTTTCTGATTCACAGTTTCCCAATTTGATACTGGATCAGTTTAGCGTGAGAGAGTTTGTTTTATTTTCAGTAAACCTTAGACAGGCAGATTGTCAAACCTCAGACTTCCAGCCAAATGATGAACTTGCAGCCACTGTTGTCAAAATCCCGAAAAAGAGGAGTCAGACATCATCTACAGATTGGCGTCGTAGGGATATCTATAGTGACTTGCCTGCGGTTGGTTCAGTAGAGTGTTTGTCAAAGGTGAGACGCCACTCCTATTCTGTGGAAGATGTACAGAGCAAGCCTTTTGTTGGTAGTCAAGGCCTCATTAGCACAACGGTCATACTTCCAAGTGGTGCTCATAGTCTTCCGAGTAATGGAGGACCATCATCTCTGATTGAACGTTGGAGTACAGGTGGCTCATGTGACTGTGGGGGTTGGGATTTGGGTTGCAAACTACGGATATTGGACAACCAGAATCAAGCCAGTGAGAATTTGACTTCACAGAAGGTTTGTTCAATCCCAGATCGGTTCGAGCTTTGCCATCAGGGAGGACTACAAGAAAACCAACCTGCTTTAAGTTTGGCCCCATTCAAGGATGGGATCTATTCAGTTGAGTTTAATTCTTCACTCTCAGTTTTACAAGCATTCTCCATTTGTATAGCAGTGTTAGATAGTAGGAATCTATGCGAGTTCTCAGAGTTCCGGGAAACCAAAGCAACAGTGCAAGATGATGGAATAAGTGATCTGAATCAAATGGAAGGGGAAGTTCCTGCAAGATATGCCTCGTATCCTCCTCTTTCACCAGCCGGGCGCGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

934

Amino Acids

103.13

Weight (kDa)

9.24

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3527 PF12043 583 - 692 2.6e-12 Domain of unknown function (DUF3527)
DUF3527 PF12043 697 - 887 6.4e-44 Domain of unknown function (DUF3527)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2563
AccB1I GGYRCC 1 cut(s) 339
AccII CGCG 1 cut(s) 2799
AciI CCGC 9 cut(s) 202, 736, 1339, 1464, 1526, 1586, 1778, 1909, 2216
AclI AACGTT 1 cut(s) 2386
AclWI GGATC 6 cut(s) 600, 1288, 1538, 1551, 2043, 2594
AcsI RAATTY 4 cut(s) 28, 769, 844, 2476
AcuI CTGAAG 9 cut(s) 255, 570, 885, 1078, 1095, 1380, 1464, 1574, 1885
AcyI GRCGYC 3 cut(s) 340, 2185, 2251
AfaI GTAC 3 cut(s) 1404, 2277, 2395
AfiI CCNNNNNNNGG 9 cut(s) 539, 725, 1277, 1445, 2083, 2219, 2294, 2360, 2578
AjnI CCWGG 5 cut(s) 300, 895, 1428, 1438, 1669
AjuI GAANNNNNNNTTGG 2 cut(s) 948, 980
Alw21I GWGCWC 2 cut(s) 1038, 2344
Alw26I GTCTC 5 cut(s) 184, 1003, 1052, 1203, 2242
AlwI GGATC 6 cut(s) 600, 1288, 1538, 1551, 2043, 2594
AlwNI CAGNNNCTG 2 cut(s) 1487, 2135
Ama87I CYCGRG 1 cut(s) 792
AoxI GGCC 6 cut(s) 542, 1020, 1745, 1789, 2305, 2568
ApeKI GCWGC 9 cut(s) 761, 826, 829, 977, 1124, 1134, 1666, 1838, 2129
ApoI RAATTY 4 cut(s) 28, 769, 844, 2476
AseI ATTAAT 1 cut(s) 219
Asp700I GAANNNNTTC 3 cut(s) 697, 919, 1974
AspA2I CCTAGG 1 cut(s) 1412
AspLEI GCGC 3 cut(s) 75, 342, 2799
AspS9I GGNCC 4 cut(s) 542, 1518, 2366, 2569
AsuC2I CCSGG 2 cut(s) 2690, 2794
AsuHPI GGTGA 7 cut(s) 174, 390, 812, 1323, 1886, 2257, 2778
AvaI CYCGRG 1 cut(s) 792
AvaII GGWCC 2 cut(s) 1518, 2366
AvrII CCTAGG 1 cut(s) 1412
AxyI CCTNAGG 1 cut(s) 1864
BaeI ACNNNNGTAYC 2 cut(s) 1227, 1260
BamHI GGATCC 1 cut(s) 1543
BanI GGYRCC 1 cut(s) 339
BanII GRGCYC 3 cut(s) 21, 1038, 1202
BbsI GAAGAC 2 cut(s) 1230, 2342
Bbv12I GWGCWC 2 cut(s) 1038, 2344
BbvCI CCTCAGC 1 cut(s) 1529
BbvI GCAGC 9 cut(s) 773, 838, 841, 964, 1136, 1146, 1678, 1825, 2141
BceAI ACGGC 1 cut(s) 1047
BciT130I CCWGG 5 cut(s) 302, 897, 1430, 1440, 1671
BciVI GTATCC 2 cut(s) 1468, 2784
BcnI CCSGG 2 cut(s) 2690, 2794
BcoDI GTCTC 5 cut(s) 184, 1003, 1052, 1203, 2242
BfaI CTAG 9 cut(s) 50, 126, 456, 854, 1413, 1434, 1506, 1685, 2803
BfmI CTRYAG 4 cut(s) 978, 1879, 2175, 2200
BfoI RGCGCY 1 cut(s) 343
BfuAI ACCTGC 1 cut(s) 2563
BfuI GTATCC 2 cut(s) 1468, 2784
BglII AGATCT 1 cut(s) 901
BisI GCNGC 9 cut(s) 762, 827, 830, 978, 1125, 1135, 1667, 1839, 2130
BlnI CCTAGG 1 cut(s) 1412
BlpI GCTNAGC 1 cut(s) 1159
BlsI GCNGC 9 cut(s) 763, 828, 831, 979, 1126, 1136, 1668, 1840, 2131
Bme1390I CCNGG 7 cut(s) 302, 897, 1430, 1440, 1671, 2690, 2794
Bme18I GGWCC 2 cut(s) 1518, 2366
BmeT110I CYCGRG 1 cut(s) 792
BmgT120I GGNCC 4 cut(s) 542, 1518, 2366, 2569
BmiI GGNNCC 6 cut(s) 200, 341, 1114, 1545, 1590, 2571
BmrFI CCNGG 7 cut(s) 302, 897, 1430, 1440, 1671, 2690, 2794
BmrI ACTGGG 1 cut(s) 343
BmsI GCATC 3 cut(s) 363, 483, 1172
BmuI ACTGGG 1 cut(s) 343
BpiI GAAGAC 2 cut(s) 1230, 2342
BpmI CTGGAG 2 cut(s) 284, 918
Bpu10I CCTNAGC 1 cut(s) 1529
Bpu1102I GCTNAGC 1 cut(s) 1159
BpuEI CTTGAG 1 cut(s) 302
BpuMI CCSGG 2 cut(s) 2690, 2794
BsaBI GATNNNNATC 2 cut(s) 147, 2733
BsaHI GRCGYC 3 cut(s) 340, 2185, 2251
BsaI GGTCTC 2 cut(s) 1003, 1052
BsaJI CCNNGG 3 cut(s) 1014, 1412, 1670
BsaWI WCCGGW 1 cut(s) 1379
BsaXI ACNNNNNCTCC 2 cut(s) 2383, 2413
Bsc4I CCNNNNNNNGG 9 cut(s) 539, 725, 1277, 1445, 2083, 2219, 2294, 2360, 2578
Bse118I RCCGGY 1 cut(s) 390
Bse1I ACTGG 7 cut(s) 338, 405, 540, 1545, 1699, 2037, 2469
Bse21I CCTNAGG 1 cut(s) 1864
Bse3DI GCAATG 2 cut(s) 68, 1350
Bse8I GATNNNNATC 2 cut(s) 147, 2733
BseBI CCWGG 5 cut(s) 302, 897, 1430, 1440, 1671
BseDI CCNNGG 3 cut(s) 1014, 1412, 1670
BseGI GGATG 5 cut(s) 10, 401, 498, 1202, 2587
BseJI GATNNNNATC 2 cut(s) 147, 2733
BseLI CCNNNNNNNGG 9 cut(s) 539, 725, 1277, 1445, 2083, 2219, 2294, 2360, 2578
BseMI GCAATG 2 cut(s) 68, 1350
BseMII CTCAG 8 cut(s) 705, 1173, 1520, 1653, 1878, 2115, 2631, 2694
BseNI ACTGG 7 cut(s) 338, 405, 540, 1545, 1699, 2037, 2469
BseRI GAGGAG 3 cut(s) 1546, 2173, 2769
BseXI GCAGC 9 cut(s) 773, 838, 841, 964, 1136, 1146, 1678, 1825, 2141
BsgI GTGCAG 1 cut(s) 1143
Bsh1236I CGCG 1 cut(s) 2799
BshFI GGCC 6 cut(s) 544, 1022, 1747, 1791, 2307, 2570
BshNI GGYRCC 1 cut(s) 339
BsiHKAI GWGCWC 2 cut(s) 1038, 2344
BsiHKCI CYCGRG 1 cut(s) 792
BsiSI CCGG 4 cut(s) 391, 1380, 2689, 2793
BslI CCNNNNNNNGG 9 cut(s) 539, 725, 1277, 1445, 2083, 2219, 2294, 2360, 2578
BsmAI GTCTC 5 cut(s) 184, 1003, 1052, 1203, 2242
BsmBI CGTCTC 1 cut(s) 2242
BsmI GAATGC 1 cut(s) 2630
BsnI GGCC 6 cut(s) 544, 1022, 1747, 1791, 2307, 2570
Bso31I GGTCTC 2 cut(s) 1003, 1052
BsoBI CYCGRG 1 cut(s) 792
Bsp1286I GDGCHC 4 cut(s) 21, 1038, 1202, 2344
Bsp1407I TGTACA 2 cut(s) 1402, 2275
Bsp1720I GCTNAGC 1 cut(s) 1159
BspACI CCGC 9 cut(s) 202, 736, 1339, 1464, 1526, 1586, 1778, 1909, 2216
BspANI GGCC 6 cut(s) 544, 1022, 1747, 1791, 2307, 2570
BspCNI CTCAG 8 cut(s) 706, 1172, 1521, 1654, 1877, 2114, 2630, 2693
BspFNI CGCG 1 cut(s) 2799
BspHI TCATGA 2 cut(s) 151, 1966
BspLI GGNNCC 6 cut(s) 200, 341, 1114, 1545, 1590, 2571
BspMAI CTGCAG 2 cut(s) 982, 1883
BspMI ACCTGC 1 cut(s) 2563
BspPI GGATC 6 cut(s) 600, 1288, 1538, 1551, 2043, 2594
BspQI GCTCTTC 1 cut(s) 1770
BspT107I GGYRCC 1 cut(s) 339
BspTNI GGTCTC 2 cut(s) 1003, 1052
BsrDI GCAATG 2 cut(s) 68, 1350
BsrFI RCCGGY 1 cut(s) 390
BsrGI TGTACA 2 cut(s) 1402, 2275
BsrI ACTGG 7 cut(s) 338, 405, 540, 1545, 1699, 2037, 2469
BssAI RCCGGY 1 cut(s) 390
BssECI CCNNGG 3 cut(s) 1014, 1412, 1670
BssNI GRCGYC 3 cut(s) 340, 2185, 2251
BssT1I CCWWGG 2 cut(s) 1014, 1412
Bst2UI CCWGG 5 cut(s) 302, 897, 1430, 1440, 1671
Bst6I CTCTTC 1 cut(s) 1770
BstACI GRCGYC 3 cut(s) 340, 2185, 2251
BstAPI GCANNNNNTGC 1 cut(s) 2765
BstAUI TGTACA 2 cut(s) 1402, 2275
BstC8I GCNNGC 6 cut(s) 746, 1001, 1526, 1793, 2214, 2285
BstENI CCTNNNNNAGG 2 cut(s) 1275, 2081
BstF5I GGATG 5 cut(s) 10, 401, 498, 1202, 2587
BstFNI CGCG 1 cut(s) 2799
BstH2I RGCGCY 1 cut(s) 343
BstHHI GCGC 3 cut(s) 75, 342, 2799
BstMAI GTCTC 5 cut(s) 184, 1003, 1052, 1203, 2242
BstMWI GCNNNNNNNGC 5 cut(s) 16, 1028, 1347, 2313, 2765
BstNI CCWGG 5 cut(s) 302, 897, 1430, 1440, 1671
BstSCI CCNGG 7 cut(s) 300, 895, 1428, 1438, 1669, 2688, 2792
BstSFI CTRYAG 4 cut(s) 978, 1879, 2175, 2200
BstUI CGCG 1 cut(s) 2799
BstV1I GCAGC 9 cut(s) 773, 838, 841, 964, 1136, 1146, 1678, 1825, 2141
BstV2I GAAGAC 2 cut(s) 1230, 2342
BstX2I RGATCY 4 cut(s) 592, 901, 1543, 2586
BstYI RGATCY 4 cut(s) 592, 901, 1543, 2586
Bsu36I CCTNAGG 1 cut(s) 1864
BsuI GTATCC 2 cut(s) 1468, 2784
BsuRI GGCC 6 cut(s) 544, 1022, 1747, 1791, 2307, 2570
BtsCI GGATG 5 cut(s) 10, 401, 498, 1202, 2587
BtsI GCAGTG 3 cut(s) 959, 1547, 2655
BveI ACCTGC 1 cut(s) 2563
Cac8I GCNNGC 6 cut(s) 746, 1001, 1526, 1793, 2214, 2285
CaiI CAGNNNCTG 2 cut(s) 1487, 2135
CciI TCATGA 2 cut(s) 151, 1966
CfoI GCGC 3 cut(s) 75, 342, 2799
Cfr10I RCCGGY 1 cut(s) 390
Cfr13I GGNCC 4 cut(s) 542, 1518, 2366, 2569
CseI GACGC 3 cut(s) 2174, 2259, 2788
CsiI ACCWGGT 1 cut(s) 1438
Csp6I GTAC 3 cut(s) 1403, 2276, 2394
CviAII CATG 7 cut(s) 152, 187, 423, 1690, 1946, 1967, 2406
CviQI GTAC 3 cut(s) 1403, 2276, 2394
DinI GGCGCC 1 cut(s) 341
DraI TTTAAA 1 cut(s) 315
Eam1104I CTCTTC 1 cut(s) 1770
EarI CTCTTC 1 cut(s) 1770
EciI GGCGGA 1 cut(s) 1328
Ecl136II GAGCTC 1 cut(s) 1036
Eco130I CCWWGG 2 cut(s) 1014, 1412
Eco147I AGGCCT 2 cut(s) 1022, 2307
Eco24I GRGCYC 3 cut(s) 21, 1038, 1202
Eco31I GGTCTC 2 cut(s) 1003, 1052
Eco32I GATATC 1 cut(s) 2197
Eco47I GGWCC 2 cut(s) 1518, 2366
Eco53kI GAGCTC 1 cut(s) 1036
Eco57I CTGAAG 9 cut(s) 255, 570, 885, 1078, 1095, 1380, 1464, 1574, 1885
Eco81I CCTNAGG 1 cut(s) 1864
Eco88I CYCGRG 1 cut(s) 792
EcoICRI GAGCTC 1 cut(s) 1036
EcoNI CCTNNNNNAGG 2 cut(s) 1275, 2081
EcoO109I RGGNCCY 1 cut(s) 542
EcoRII CCWGG 5 cut(s) 300, 895, 1428, 1438, 1669
EcoRV GATATC 1 cut(s) 2197
EcoT14I CCWWGG 2 cut(s) 1014, 1412
EcoT38I GRGCYC 3 cut(s) 21, 1038, 1202
EgeI GGCGCC 1 cut(s) 341
EheI GGCGCC 1 cut(s) 341
ErhI CCWWGG 2 cut(s) 1014, 1412
Esp3I CGTCTC 1 cut(s) 2242
FaeI CATG 7 cut(s) 155, 190, 426, 1693, 1949, 1970, 2409
FatI CATG 7 cut(s) 151, 186, 422, 1689, 1945, 1966, 2405
FauI CCCGC 2 cut(s) 1533, 1902
Fnu4HI GCNGC 9 cut(s) 762, 827, 830, 978, 1125, 1135, 1667, 1839, 2130
FokI GGATG 5 cut(s) 17, 388, 505, 1189, 2594
FriOI GRGCYC 3 cut(s) 21, 1038, 1202
Fsp4HI GCNGC 9 cut(s) 762, 827, 830, 978, 1125, 1135, 1667, 1839, 2130
FspBI CTAG 9 cut(s) 50, 126, 456, 854, 1413, 1434, 1506, 1685, 2803
GlaI GCGC 3 cut(s) 74, 341, 2798
GluI GCNGC 9 cut(s) 762, 827, 830, 978, 1125, 1135, 1667, 1839, 2130
GsuI CTGGAG 2 cut(s) 284, 918
HaeII RGCGCY 1 cut(s) 343
HaeIII GGCC 6 cut(s) 544, 1022, 1747, 1791, 2307, 2570
HapII CCGG 4 cut(s) 391, 1380, 2689, 2793
HgaI GACGC 3 cut(s) 2174, 2259, 2788
HhaI GCGC 3 cut(s) 75, 342, 2799
Hin1I GRCGYC 3 cut(s) 340, 2185, 2251
Hin1II CATG 7 cut(s) 155, 190, 426, 1693, 1949, 1970, 2409
Hin6I GCGC 3 cut(s) 73, 340, 2797
HinP1I GCGC 3 cut(s) 73, 340, 2797
HincII GTYRAC 2 cut(s) 559, 1419
HindII GTYRAC 2 cut(s) 559, 1419
HindIII AAGCTT 2 cut(s) 309, 997
HpaII CCGG 4 cut(s) 391, 1380, 2689, 2793
HphI GGTGA 7 cut(s) 174, 390, 812, 1323, 1886, 2257, 2778
Hpy166II GTNNAC 6 cut(s) 559, 1088, 1419, 1803, 1816, 2074
Hpy8I GTNNAC 6 cut(s) 559, 1088, 1419, 1803, 1816, 2074
Hpy99I CGWCG 2 cut(s) 996, 2190
HpyAV CCTTC 8 cut(s) 513, 533, 555, 860, 1080, 1993, 2485, 2738
HpyCH4IV ACGT 4 cut(s) 214, 1455, 1713, 2386
HpyF10VI GCNNNNNNNGC 5 cut(s) 16, 1028, 1347, 2313, 2765
HpySE526I ACGT 4 cut(s) 214, 1455, 1713, 2386
Hsp92I GRCGYC 3 cut(s) 340, 2185, 2251
Hsp92II CATG 7 cut(s) 155, 190, 426, 1693, 1949, 1970, 2409
HspAI GCGC 3 cut(s) 73, 340, 2797
KasI GGCGCC 1 cut(s) 339
LguI GCTCTTC 1 cut(s) 1770
LmnI GCTCC 2 cut(s) 1118, 1588
Lsp1109I GCAGC 9 cut(s) 773, 838, 841, 964, 1136, 1146, 1678, 1825, 2141
LweI GCATC 3 cut(s) 363, 483, 1172
MabI ACCWGGT 1 cut(s) 1438
MaeI CTAG 9 cut(s) 50, 126, 456, 854, 1413, 1434, 1506, 1685, 2803
MaeII ACGT 4 cut(s) 214, 1455, 1713, 2386
MaeIII GTNAC 8 cut(s) 464, 523, 611, 1303, 1536, 1874, 2204, 2408
MflI RGATCY 4 cut(s) 592, 901, 1543, 2586
MhlI GDGCHC 4 cut(s) 21, 1038, 1202, 2344
Mly113I GGCGCC 1 cut(s) 340
MlyI GAGTC 2 cut(s) 636, 2170
MmeI TCCRAC 4 cut(s) 301, 559, 963, 2369
MroXI GAANNNNTTC 3 cut(s) 697, 919, 1974
MslI CAYNNNNRTG 2 cut(s) 674, 1355
MspA1I CMGCKG 3 cut(s) 471, 1528, 1586
MspI CCGG 4 cut(s) 391, 1380, 2689, 2793
MspR9I CCNGG 7 cut(s) 302, 897, 1430, 1440, 1671, 2690, 2794
Mva1269I GAATGC 1 cut(s) 2630
MvaI CCWGG 5 cut(s) 302, 897, 1430, 1440, 1671
MvnI CGCG 1 cut(s) 2799
MwoI GCNNNNNNNGC 5 cut(s) 16, 1028, 1347, 2313, 2765
NarI GGCGCC 1 cut(s) 340
NciI CCSGG 2 cut(s) 2690, 2794
NlaIII CATG 7 cut(s) 155, 190, 426, 1693, 1949, 1970, 2409
NlaIV GGNNCC 6 cut(s) 200, 341, 1114, 1545, 1590, 2571
NmeAIII GCCGAG 1 cut(s) 1089
NmuCI GTSAC 5 cut(s) 464, 523, 1874, 2204, 2408
PaeR7I CTCGAG 1 cut(s) 792
PagI TCATGA 2 cut(s) 151, 1966
PceI AGGCCT 2 cut(s) 1022, 2307
PciSI GCTCTTC 1 cut(s) 1770
PctI GAATGC 1 cut(s) 2630
PdmI GAANNNNTTC 3 cut(s) 697, 919, 1974
PfoI TCCNGGA 2 cut(s) 300, 2688
PkrI GCNGC 9 cut(s) 763, 828, 831, 979, 1126, 1136, 1668, 1840, 2131
PleI GAGTC 2 cut(s) 635, 2169
PluTI GGCGCC 1 cut(s) 343
PpsI GAGTC 2 cut(s) 635, 2169
PshBI ATTAAT 1 cut(s) 219
Psp124BI GAGCTC 1 cut(s) 1038
Psp1406I AACGTT 1 cut(s) 2386
Psp6I CCWGG 5 cut(s) 300, 895, 1428, 1438, 1669
PspGI CCWGG 5 cut(s) 300, 895, 1428, 1438, 1669
PspN4I GGNNCC 6 cut(s) 200, 341, 1114, 1545, 1590, 2571
PspPI GGNCC 4 cut(s) 542, 1518, 2366, 2569
PstI CTGCAG 2 cut(s) 982, 1883
PstNI CAGNNNCTG 2 cut(s) 1487, 2135
PsuI RGATCY 4 cut(s) 592, 901, 1543, 2586
PvuII CAGCTG 1 cut(s) 471
RsaI GTAC 3 cut(s) 1404, 2277, 2395
RsaNI GTAC 3 cut(s) 1403, 2276, 2394
RseI CAYNNNNRTG 2 cut(s) 674, 1355
SacI GAGCTC 1 cut(s) 1038
SapI GCTCTTC 1 cut(s) 1770
SatI GCNGC 9 cut(s) 762, 827, 830, 978, 1125, 1135, 1667, 1839, 2130
Sau96I GGNCC 4 cut(s) 542, 1518, 2366, 2569
SchI GAGTC 2 cut(s) 636, 2170
ScrFI CCNGG 7 cut(s) 302, 897, 1430, 1440, 1671, 2690, 2794
SduI GDGCHC 4 cut(s) 21, 1038, 1202, 2344
SexAI ACCWGGT 1 cut(s) 1438
SfaNI GCATC 3 cut(s) 363, 483, 1172
SfcI CTRYAG 4 cut(s) 978, 1879, 2175, 2200
SfoI GGCGCC 1 cut(s) 341
Sfr274I CTCGAG 1 cut(s) 792
SinI GGWCC 2 cut(s) 1518, 2366
SlaI CTCGAG 1 cut(s) 792
SmiMI CAYNNNNRTG 2 cut(s) 674, 1355
SmlI CTYRAG 2 cut(s) 281, 792
SmoI CTYRAG 2 cut(s) 281, 792
SseBI AGGCCT 2 cut(s) 1022, 2307
SsiI CCGC 9 cut(s) 202, 736, 1339, 1464, 1526, 1586, 1778, 1909, 2216
SspDI GGCGCC 1 cut(s) 339
SspMI CTAG 9 cut(s) 50, 126, 456, 854, 1413, 1434, 1506, 1685, 2803
SstI GAGCTC 1 cut(s) 1038
StuI AGGCCT 2 cut(s) 1022, 2307
StyD4I CCNGG 7 cut(s) 300, 895, 1428, 1438, 1669, 2688, 2792
StyI CCWWGG 2 cut(s) 1014, 1412
TaiI ACGT 4 cut(s) 217, 1458, 1716, 2389
TaqI TCGA 4 cut(s) 240, 793, 991, 2517
TatI WGTACW 3 cut(s) 1402, 2275, 2393
TseFI GTSAC 5 cut(s) 464, 523, 1874, 2204, 2408
TseI GCWGC 9 cut(s) 761, 826, 829, 977, 1124, 1134, 1666, 1838, 2129
Tsp45I GTSAC 5 cut(s) 464, 523, 1874, 2204, 2408
TspDTI ATGAA 7 cut(s) 168, 258, 453, 1862, 1983, 2012, 2136
TspGWI ACGGA 1 cut(s) 2458
VpaK11BI GGWCC 2 cut(s) 1518, 2366
VspI ATTAAT 1 cut(s) 219
XagI CCTNNNNNAGG 2 cut(s) 1275, 2081
XapI RAATTY 4 cut(s) 28, 769, 844, 2476
XcmI CCANNNNNNNNNTGG 2 cut(s) 1436, 2029
XhoI CTCGAG 1 cut(s) 792
XmaJI CCTAGG 1 cut(s) 1412
XmnI GAANNNNTTC 3 cut(s) 697, 919, 1974
XspI CTAG 9 cut(s) 50, 126, 456, 854, 1413, 1434, 1506, 1685, 2803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.