Rmu_sc0002079.1_g000012

Receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002079.1
OG0000024
Physical Location & Seq
Reverse (-)
75111 .. 77936
2826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002079.1_g000012.1.cds

Sequence Viewer

Length: 2826 bp
atggtttggtggttctcatggctctgtctcctcttcttgctctttacttctcaattgaactgttcattatcatcttctaactcttcctctccttcttcttcaaggcatgtgtgtaattctgatgagagttctgctttacttcaattcaagaactcatttcatgttaatcactcaatatatgatcgttgggaaattgctcatcccaagacagactcatgggcaaaagatgaagactgttgcagatggagcggtgtcacatgtgaaagggtcactggtcacgtgagcggcctagaccttagtaatggtgggcttcaaggaatacttcactccaacagcagcttattctctctcggccatctcaagatgctagacctatcttacaatgatttcatgggttcttccatttcttccaagtttggtggatttgtaagtatgacacacctcagcctctattattccaacttcactggtaaaatcccttccgaaatctcccagctttccaaaatagtttcacttgagctctcttatgggcccgatgaaaaaactacaatagacacgcttaccatgaaaggaattgctctcaacctcaccagccttggagtgctttctctcaattttgtggacatgtcttcagttgtacctgattccttcctgaatttgtcttcttctttgacttcactttcgctcggagaatgtaatttgcgtgggaagttcccagggactttattccaccttcccaaccttgaaatacttctcttggatggaaacactaatctcacaggatacacccccaaatctaattggagtagtccactgaagtacttgtggctctctgagactaaaatctcaatagatctgcatttcttgacaagcagtttgaaatctttgcgcattttgtctcttcgggactgcaatttctcaggatcgcgctcgcatcttgaattgtctggtaacctcacacaactcatgttgttggaactctctgataatagttttggtggccagataccatggacgtcgctttttaaccttgagcaactcattaccttggatctttcaagcaacatgtttgtgggtgaacttccagaaattcatggtaattccacaaaagcatcttcaactttacatgattcttcaaagaaacaacttgttggtggttctattcctatgggtttgtccgtactccggttggagaacaactcacttagcggaacaataccatcttgggtatattctttgccatctttggattatttgagcctcggctacaacgaattcactggtaatatcaatgatttccagtctctttccttatcatatcttgttttaaatgataacaagcttcatggcatgattccgagttcgatctatggacttgtgaaacttgaatatcttttgatatcctcaaacaatttgagtggcgttgtgaagtttgaaaagtttcaaaatctccaaagtctcaccggtctagatctttcctataatcatctaatggtgagttttcagaacttcagtaattatacattgcctaaactttcattactgtacatgtctggttgcaaaataactcagtttccgtacttcctgagaacctcaacccaattaaaatacctagatctttccgacaaccagattcaattgactggagcattgccatccaccatttgcaacctgacttctgtccaagtaattgatttatctaacaatagcttgagtggcaggattcctcaatgtatagggaatttcagtcaagatctctcagttttggatttgcatatgaatcaatttcgtggcaggatcccttcaacattccccaagggaaacatcttgaggaatcttgaccttcatggaaatcagttggaagggactctgccacagtctctaatcaattgcagaaagatggaagttctagacttgggagacaacaagctaaacgatactttcccgaattggttggagtctgttcccgagttacaggttctcatcttgggatctaacagactgtatggtccaattggcagtccagagacaagatttcccttccgaaaattgcgaatcattgacctctccagcaatcagtttggtggccctttgcctacaaagtactttcagaaattggtggctatgaaagacgtgcaagatgatgaactgaagtacatgggagaacgttattaccaagacacagtcacagtggtaatgaaaggcttgtattttgagctgatcaaaatacaaaccatgttcacaaccattgatttttcaaataatgttttcacaggaaagattccgacggtgatcggcgagctcaaatcattgaaggggcttaacttctctagtaacaagcttacaggtccaattccatccgccttctgtagcttgactagtctggaatggctggacatctcctcaaacatgctttctggtgagattccaaggcaactagccgatttgacgtcacttgctaagttaaacctatcaggaaaccagttggttggaccaatacctagtggcaatcagtttgatacatttgaaaatgattcatacagtggaaattggggattgtgtggatatccactgtctaaaacatgtatcaacgacgaagcacctcaaccaccatcgtttgataagcaagatggtgatgtgaatggatttgattggaaaatagtatggatgggttatggatgtggaatggtaattggattgtctgtgggatatattgttctttccattgggaaagttgatcggggggtaagggccatgggaagaaaaataaggagcagaatggcgaaaagggccaagaagactagtgttggaactagaaagtggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

941

Amino Acids

104.41

Weight (kDa)

6.64

Isoelectric Point (pI)

30.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2007
AatII GACGTC 2 cut(s) 1019, 2453
Acc16I TGCGCA 1 cut(s) 890
AccBSI CCGCTC 2 cut(s) 249, 285
AccII CGCG 1 cut(s) 928
AciI CCGC 4 cut(s) 249, 285, 1209, 2361
AclI AACGTT 1 cut(s) 2167
AclWI GGATC 5 cut(s) 931, 1059, 1792, 1805, 1999
AcoI YGGCCR 2 cut(s) 352, 1000
AcsI RAATTY 4 cut(s) 655, 1089, 1274, 1741
AcuI CTGAAG 4 cut(s) 615, 836, 1495, 2171
AcvI CACGTG 1 cut(s) 280
AcyI GRCGYC 2 cut(s) 1016, 2450
AfaI GTAC 7 cut(s) 639, 821, 1182, 1547, 1580, 2105, 2156
AfiI CCNNNNNNNGG 1 cut(s) 1185
AflIII ACRYGT 5 cut(s) 257, 624, 1065, 1548, 2582
AgeI ACCGGT 1 cut(s) 1463
AhlI ACTAGT 2 cut(s) 2378, 2801
AjiI CACGTC 1 cut(s) 2134
AjnI CCWGG 1 cut(s) 715
AloI GAACNNNNNNTCC 2 cut(s) 2700, 2732
Alw21I GWGCWC 2 cut(s) 522, 2304
Alw26I GTCTC 8 cut(s) 32, 830, 903, 1308, 1463, 1884, 1914, 2021
AlwI GGATC 5 cut(s) 931, 1059, 1792, 1805, 1999
Ama87I CYCGRG 1 cut(s) 1967
AoxI GGCC 7 cut(s) 286, 352, 530, 1000, 2086, 2751, 2790
ApaI GGGCCC 1 cut(s) 534
ApeKI GCWGC 1 cut(s) 336
ApoI RAATTY 4 cut(s) 655, 1089, 1274, 1741
ArsI GACNNNNNNTTYG 4 cut(s) 664, 696, 859, 891
AsiGI ACCGGT 1 cut(s) 1463
Asp700I GAANNNNTTC 2 cut(s) 750, 1440
AspLEI GCGC 2 cut(s) 891, 930
AspS9I GGNCC 8 cut(s) 530, 531, 2009, 2087, 2348, 2492, 2751, 2790
AsuHPI GGTGA 7 cut(s) 580, 1088, 1453, 1507, 2302, 2432, 2645
AvaI CYCGRG 1 cut(s) 1967
AvaII GGWCC 3 cut(s) 2009, 2348, 2492
BaeGI GKGCMC 1 cut(s) 534
BalI TGGCCA 1 cut(s) 1002
BamHI GGATCC 1 cut(s) 1797
BanII GRGCYC 3 cut(s) 522, 534, 2304
BarI GAAGNNNNNNTAC 2 cut(s) 463, 495
BbrPI CACGTG 1 cut(s) 280
BbsI GAAGAC 4 cut(s) 237, 621, 654, 2804
Bbv12I GWGCWC 2 cut(s) 522, 2304
BbvCI CCTCAGC 1 cut(s) 443
BbvI GCAGC 1 cut(s) 348
BciT130I CCWGG 1 cut(s) 717
BciVI GTATCC 1 cut(s) 776
BclI TGATCA 1 cut(s) 2220
BcoDI GTCTC 8 cut(s) 32, 830, 903, 1308, 1463, 1884, 1914, 2021
BcuI ACTAGT 2 cut(s) 2378, 2801
BfmI CTRYAG 1 cut(s) 2368
BfuI GTATCC 1 cut(s) 776
BglII AGATCT 4 cut(s) 853, 1471, 1615, 1753
BisI GCNGC 2 cut(s) 286, 337
BlsI GCNGC 2 cut(s) 287, 338
BmcAI AGTACT 2 cut(s) 821, 2105
Bme1390I CCNGG 1 cut(s) 717
Bme18I GGWCC 3 cut(s) 2009, 2348, 2492
BmeT110I CYCGRG 1 cut(s) 1967
BmgBI CACGTC 1 cut(s) 2134
BmgT120I GGNCC 8 cut(s) 530, 531, 2009, 2087, 2348, 2492, 2751, 2790
BmiI GGNNCC 2 cut(s) 532, 1799
BmrFI CCNGG 1 cut(s) 717
BmsI GCATC 3 cut(s) 354, 943, 1121
BoxI GACNNNNGTC 1 cut(s) 1679
BpiI GAAGAC 4 cut(s) 237, 621, 654, 2804
BplI GAGNNNNNCTC 2 cut(s) 1184, 1216
BpmI CTGGAG 2 cut(s) 1665, 2053
Bpu10I CCTNAGC 1 cut(s) 443
BpuEI CTTGAG 5 cut(s) 344, 536, 1052, 1732, 1849
BsaAI YACGTR 1 cut(s) 280
BsaHI GRCGYC 2 cut(s) 1016, 2450
BsaJI CCNNGG 9 cut(s) 595, 715, 716, 1010, 1047, 1261, 1815, 2429, 2754
BsaWI WCCGGW 2 cut(s) 1185, 1463
Bsc4I CCNNNNNNNGG 1 cut(s) 1185
Bse118I RCCGGY 1 cut(s) 1463
Bse1I ACTGG 6 cut(s) 277, 472, 1285, 1300, 1648, 2482
Bse3DI GCAATG 2 cut(s) 1523, 1649
BseBI CCWGG 1 cut(s) 717
BseDI CCNNGG 9 cut(s) 595, 715, 716, 1010, 1047, 1261, 1815, 2429, 2754
BseGI GGATG 6 cut(s) 199, 766, 1655, 2357, 2673, 2684
BseLI CCNNNNNNNGG 1 cut(s) 1185
BseMI GCAATG 2 cut(s) 1523, 1649
BseMII CTCAG 6 cut(s) 457, 825, 933, 1577, 1583, 1773
BseNI ACTGG 6 cut(s) 277, 472, 1285, 1300, 1648, 2482
BseRI GAGGAG 2 cut(s) 20, 2392
BseSI GKGCMC 1 cut(s) 534
BseXI GCAGC 1 cut(s) 348
BseYI CCCAGC 1 cut(s) 492
Bsh1236I CGCG 1 cut(s) 928
BshFI GGCC 7 cut(s) 288, 354, 532, 1002, 2088, 2753, 2792
BshTI ACCGGT 1 cut(s) 1463
BsiHKAI GWGCWC 2 cut(s) 522, 2304
BsiHKCI CYCGRG 1 cut(s) 1967
BsiSI CCGG 2 cut(s) 1186, 1464
BslFI GGGAC 3 cut(s) 733, 920, 1879
BslI CCNNNNNNNGG 1 cut(s) 1185
BsmAI GTCTC 8 cut(s) 32, 830, 903, 1308, 1463, 1884, 1914, 2021
BsmFI GGGAC 3 cut(s) 733, 920, 1879
BsnI GGCC 7 cut(s) 288, 354, 532, 1002, 2088, 2753, 2792
BsoBI CYCGRG 1 cut(s) 1967
Bsp120I GGGCCC 1 cut(s) 530
Bsp1286I GDGCHC 3 cut(s) 522, 534, 2304
Bsp1407I TGTACA 1 cut(s) 1545
Bsp19I CCATGG 2 cut(s) 1010, 2754
BspACI CCGC 4 cut(s) 249, 285, 1209, 2361
BspANI GGCC 7 cut(s) 288, 354, 532, 1002, 2088, 2753, 2792
BspCNI CTCAG 6 cut(s) 456, 826, 932, 1578, 1582, 1772
BspFNI CGCG 1 cut(s) 928
BspLI GGNNCC 2 cut(s) 532, 1799
BspPI GGATC 5 cut(s) 931, 1059, 1792, 1805, 1999
BsrBI CCGCTC 2 cut(s) 249, 285
BsrDI GCAATG 2 cut(s) 1523, 1649
BsrFI RCCGGY 1 cut(s) 1463
BsrGI TGTACA 1 cut(s) 1545
BsrI ACTGG 6 cut(s) 277, 472, 1285, 1300, 1648, 2482
BssAI RCCGGY 1 cut(s) 1463
BssECI CCNNGG 9 cut(s) 595, 715, 716, 1010, 1047, 1261, 1815, 2429, 2754
BssNI GRCGYC 2 cut(s) 1016, 2450
BssT1I CCWWGG 6 cut(s) 595, 1010, 1047, 1815, 2429, 2754
Bst2UI CCWGG 1 cut(s) 717
Bst6I CTCTTC 3 cut(s) 38, 88, 906
BstACI GRCGYC 2 cut(s) 1016, 2450
BstAUI TGTACA 1 cut(s) 1545
BstBAI YACGTR 1 cut(s) 280
BstC8I GCNNGC 2 cut(s) 932, 2300
BstDEI CTNAG 9 cut(s) 296, 443, 834, 919, 1205, 1569, 1586, 1759, 2460
BstDSI CCRYGG 2 cut(s) 1010, 2754
BstEII GGTNACC 1 cut(s) 950
BstF5I GGATG 6 cut(s) 199, 766, 1655, 2357, 2673, 2684
BstFNI CGCG 1 cut(s) 928
BstHHI GCGC 2 cut(s) 891, 930
BstMAI GTCTC 8 cut(s) 32, 830, 903, 1308, 1463, 1884, 1914, 2021
BstMWI GCNNNNNNNGC 3 cut(s) 246, 1716, 2789
BstNI CCWGG 1 cut(s) 717
BstNSI RCATGY 7 cut(s) 110, 261, 628, 1069, 1552, 2413, 2586
BstPAI GACNNNNGTC 1 cut(s) 1679
BstPI GGTNACC 1 cut(s) 950
BstSCI CCNGG 1 cut(s) 715
BstSFI CTRYAG 1 cut(s) 2368
BstSLI GKGCMC 1 cut(s) 534
BstUI CGCG 1 cut(s) 928
BstV1I GCAGC 1 cut(s) 348
BstV2I GAAGAC 4 cut(s) 237, 621, 654, 2804
BstX2I RGATCY 7 cut(s) 853, 1051, 1471, 1615, 1753, 1797, 1991
BstXI CCANNNNNNTGG 1 cut(s) 2489
BstYI RGATCY 7 cut(s) 853, 1051, 1471, 1615, 1753, 1797, 1991
BsuI GTATCC 1 cut(s) 776
BsuRI GGCC 7 cut(s) 288, 354, 532, 1002, 2088, 2753, 2792
BtgI CCRYGG 2 cut(s) 1010, 2754
BtrI CACGTC 1 cut(s) 2134
BtsCI GGATG 6 cut(s) 199, 766, 1655, 2357, 2673, 2684
BtsIMutI CAGTG 7 cut(s) 270, 465, 812, 1278, 2196, 2548, 2570
Cac8I GCNNGC 2 cut(s) 932, 2300
CfoI GCGC 2 cut(s) 891, 930
Cfr10I RCCGGY 1 cut(s) 1463
Cfr13I GGNCC 8 cut(s) 530, 531, 2009, 2087, 2348, 2492, 2751, 2790
Csp6I GTAC 7 cut(s) 638, 820, 1181, 1546, 1579, 2104, 2155
CspAI ACCGGT 1 cut(s) 1463
CspCI CAANNNNNGTGG 4 cut(s) 400, 435, 1399, 1434
CviQI GTAC 7 cut(s) 638, 820, 1181, 1546, 1579, 2104, 2155
DdeI CTNAG 9 cut(s) 296, 443, 834, 919, 1205, 1569, 1586, 1759, 2460
DraI TTTAAA 1 cut(s) 1329
DrdI GACNNNNNNGTC 1 cut(s) 2007
DseDI GACNNNNNNGTC 1 cut(s) 2007
EaeI YGGCCR 2 cut(s) 352, 1000
Eam1104I CTCTTC 3 cut(s) 38, 88, 906
EarI CTCTTC 3 cut(s) 38, 88, 906
EciI GGCGGA 1 cut(s) 2350
Ecl136II GAGCTC 2 cut(s) 520, 2302
Eco130I CCWWGG 6 cut(s) 595, 1010, 1047, 1815, 2429, 2754
Eco24I GRGCYC 3 cut(s) 522, 534, 2304
Eco32I GATATC 2 cut(s) 1401, 2567
Eco47I GGWCC 3 cut(s) 2009, 2348, 2492
Eco53kI GAGCTC 2 cut(s) 520, 2302
Eco57I CTGAAG 4 cut(s) 615, 836, 1495, 2171
Eco72I CACGTG 1 cut(s) 280
Eco88I CYCGRG 1 cut(s) 1967
Eco91I GGTNACC 1 cut(s) 950
EcoICRI GAGCTC 2 cut(s) 520, 2302
EcoO65I GGTNACC 1 cut(s) 950
EcoRI GAATTC 1 cut(s) 1274
EcoRII CCWGG 1 cut(s) 715
EcoRV GATATC 2 cut(s) 1401, 2567
EcoT14I CCWWGG 6 cut(s) 595, 1010, 1047, 1815, 2429, 2754
EcoT38I GRGCYC 3 cut(s) 522, 534, 2304
ErhI CCWWGG 6 cut(s) 595, 1010, 1047, 1815, 2429, 2754
FalI AAGNNNNNCTT 2 cut(s) 306, 338
FaqI GGGAC 3 cut(s) 733, 920, 1879
FauNDI CATATG 1 cut(s) 1776
FbaI TGATCA 1 cut(s) 2220
Fnu4HI GCNGC 2 cut(s) 286, 337
FokI GGATG 6 cut(s) 186, 773, 1642, 2344, 2680, 2691
FriOI GRGCYC 3 cut(s) 522, 534, 2304
Fsp4HI GCNGC 2 cut(s) 286, 337
FspI TGCGCA 1 cut(s) 890
GlaI GCGC 2 cut(s) 890, 929
GluI GCNGC 2 cut(s) 286, 337
GsaI CCCAGC 1 cut(s) 496
GsuI CTGGAG 2 cut(s) 1665, 2053
HaeIII GGCC 7 cut(s) 288, 354, 532, 1002, 2088, 2753, 2792
HapII CCGG 2 cut(s) 1186, 1464
HhaI GCGC 2 cut(s) 891, 930
Hin1I GRCGYC 2 cut(s) 1016, 2450
Hin6I GCGC 2 cut(s) 889, 928
HinP1I GCGC 2 cut(s) 889, 928
HindIII AAGCTT 2 cut(s) 1340, 2339
HpaII CCGG 2 cut(s) 1186, 1464
HphI GGTGA 7 cut(s) 580, 1088, 1453, 1507, 2302, 2432, 2645
Hpy166II GTNNAC 4 cut(s) 622, 812, 1079, 2241
Hpy8I GTNNAC 4 cut(s) 622, 812, 1079, 2241
Hpy99I CGWCG 3 cut(s) 1021, 2290, 2597
HpyCH4IV ACGT 5 cut(s) 279, 1016, 2133, 2167, 2450
HpyCH4V TGCA 8 cut(s) 240, 859, 912, 1560, 1668, 1774, 1893, 2137
HpyF10VI GCNNNNNNNGC 3 cut(s) 246, 1716, 2789
HpyF3I CTNAG 9 cut(s) 296, 443, 834, 919, 1205, 1569, 1586, 1759, 2460
HpySE526I ACGT 5 cut(s) 279, 1016, 2133, 2167, 2450
Hsp92I GRCGYC 2 cut(s) 1016, 2450
HspAI GCGC 2 cut(s) 889, 928
Ksp22I TGATCA 1 cut(s) 2220
LmnI GCTCC 3 cut(s) 246, 1646, 2772
Lsp1109I GCAGC 1 cut(s) 348
LweI GCATC 3 cut(s) 354, 943, 1121
MaeII ACGT 5 cut(s) 279, 1016, 2133, 2167, 2450
MaeIII GTNAC 8 cut(s) 253, 268, 275, 950, 1971, 2185, 2333, 2451
MbiI CCGCTC 2 cut(s) 249, 285
MfeI CAATTG 4 cut(s) 53, 1637, 1888, 2013
MflI RGATCY 7 cut(s) 853, 1051, 1471, 1615, 1753, 1797, 1991
MhlI GDGCHC 3 cut(s) 522, 534, 2304
MlsI TGGCCA 1 cut(s) 1002
MluNI TGGCCA 1 cut(s) 1002
MlyI GAGTC 3 cut(s) 206, 1861, 1967
Mox20I TGGCCA 1 cut(s) 1002
MroXI GAANNNNTTC 2 cut(s) 750, 1440
MscI TGGCCA 1 cut(s) 1002
MseI TTAA 6 cut(s) 165, 1026, 1328, 1604, 2322, 2465
MslI CAYNNNNRTG 1 cut(s) 1070
Msp20I TGGCCA 1 cut(s) 1002
MspI CCGG 2 cut(s) 1186, 1464
MspR9I CCNGG 1 cut(s) 717
MunI CAATTG 4 cut(s) 53, 1637, 1888, 2013
MvaI CCWGG 1 cut(s) 717
MvnI CGCG 1 cut(s) 928
MwoI GCNNNNNNNGC 3 cut(s) 246, 1716, 2789
NcoI CCATGG 2 cut(s) 1010, 2754
NdeI CATATG 1 cut(s) 1776
NlaIV GGNNCC 2 cut(s) 532, 1799
NmeAIII GCCGAG 2 cut(s) 330, 1242
NmuCI GTSAC 5 cut(s) 253, 268, 275, 2185, 2451
NsbI TGCGCA 1 cut(s) 890
NspI RCATGY 7 cut(s) 110, 261, 628, 1069, 1552, 2413, 2586
PasI CCCWGGG 1 cut(s) 716
PciI ACATGT 5 cut(s) 257, 624, 1065, 1548, 2582
PcsI WCGNNNNNNNCGW 1 cut(s) 1269
PdmI GAANNNNTTC 2 cut(s) 750, 1440
PflFI GACNNNGTC 1 cut(s) 2183
PinAI ACCGGT 1 cut(s) 1463
PkrI GCNGC 2 cut(s) 287, 338
PleI GAGTC 3 cut(s) 206, 1861, 1966
PmaCI CACGTG 1 cut(s) 280
PmlI CACGTG 1 cut(s) 280
PpsI GAGTC 3 cut(s) 206, 1861, 1966
Ppu21I YACGTR 1 cut(s) 280
PscI ACATGT 5 cut(s) 257, 624, 1065, 1548, 2582
PshAI GACNNNNGTC 1 cut(s) 1679
Psp124BI GAGCTC 2 cut(s) 522, 2304
Psp1406I AACGTT 1 cut(s) 2167
Psp6I CCWGG 1 cut(s) 715
PspCI CACGTG 1 cut(s) 280
PspEI GGTNACC 1 cut(s) 950
PspFI CCCAGC 1 cut(s) 492
PspGI CCWGG 1 cut(s) 715
PspN4I GGNNCC 2 cut(s) 532, 1799
PspOMI GGGCCC 1 cut(s) 530
PspPI GGNCC 8 cut(s) 530, 531, 2009, 2087, 2348, 2492, 2751, 2790
PsuI RGATCY 7 cut(s) 853, 1051, 1471, 1615, 1753, 1797, 1991
PsyI GACNNNGTC 1 cut(s) 2183
RsaI GTAC 7 cut(s) 639, 821, 1182, 1547, 1580, 2105, 2156
RsaNI GTAC 7 cut(s) 638, 820, 1181, 1546, 1579, 2104, 2155
RseI CAYNNNNRTG 1 cut(s) 1070
SacI GAGCTC 2 cut(s) 522, 2304
SaqAI TTAA 6 cut(s) 165, 1026, 1328, 1604, 2322, 2465
SatI GCNGC 2 cut(s) 286, 337
Sau96I GGNCC 8 cut(s) 530, 531, 2009, 2087, 2348, 2492, 2751, 2790
ScaI AGTACT 2 cut(s) 821, 2105
SchI GAGTC 3 cut(s) 206, 1861, 1967
ScrFI CCNGG 1 cut(s) 717
SduI GDGCHC 3 cut(s) 522, 534, 2304
SfaNI GCATC 3 cut(s) 354, 943, 1121
SfcI CTRYAG 1 cut(s) 2368
SinI GGWCC 3 cut(s) 2009, 2348, 2492
SmiMI CAYNNNNRTG 1 cut(s) 1070
SmlI CTYRAG 5 cut(s) 359, 515, 1031, 1711, 1828
SmoI CTYRAG 5 cut(s) 359, 515, 1031, 1711, 1828
SpeI ACTAGT 2 cut(s) 2378, 2801
SsiI CCGC 4 cut(s) 249, 285, 1209, 2361
SstI GAGCTC 2 cut(s) 522, 2304
StyD4I CCNGG 1 cut(s) 715
StyI CCWWGG 6 cut(s) 595, 1010, 1047, 1815, 2429, 2754
TaiI ACGT 5 cut(s) 282, 1019, 2136, 2170, 2453
TaqI TCGA 1 cut(s) 1364
TatI WGTACW 4 cut(s) 819, 1545, 2103, 2154
TauI GCSGC 1 cut(s) 288
Tru1I TTAA 6 cut(s) 165, 1026, 1328, 1604, 2322, 2465
Tru9I TTAA 6 cut(s) 165, 1026, 1328, 1604, 2322, 2465
TscAI CASTG 7 cut(s) 277, 472, 819, 1285, 2196, 2548, 2577
TseFI GTSAC 5 cut(s) 253, 268, 275, 2185, 2451
TseI GCWGC 1 cut(s) 336
Tsp45I GTSAC 5 cut(s) 253, 268, 275, 2185, 2451
TspGWI ACGGA 2 cut(s) 1168, 1566
TspRI CASTG 7 cut(s) 277, 472, 819, 1285, 2196, 2548, 2577
Tth111I GACNNNGTC 1 cut(s) 2183
VpaK11BI GGWCC 3 cut(s) 2009, 2348, 2492
XapI RAATTY 4 cut(s) 655, 1089, 1274, 1741
XbaI TCTAGA 2 cut(s) 1468, 1909
XceI RCATGY 7 cut(s) 110, 261, 628, 1069, 1552, 2413, 2586
XmnI GAANNNNTTC 2 cut(s) 750, 1440
ZraI GACGTC 2 cut(s) 1017, 2451
ZrmI AGTACT 2 cut(s) 821, 2105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.