Rw2G042800

Leucine rich repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
69133762 .. 69136815
3054 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G042800.1

Sequence Viewer

Length: 2433 bp
ATGGGAATGGGATCATCCTGGTGCGACTACTTTTCTGTGCGTTATTTTATGCTTTTGTTGCTCATTAAAGTTGCATGCTGTTTTTCTTTTGTACAGACGCAGAAACTTTGCCAGGATGATGAGCGCTCTGCCTTGTTGCAATTCAAAGCTAGTTTCACTATAGACAAGAGTAACTGTTGTTCATGGGATGGTGTTGAATGCAACGACGTATCTGGCCATGTTATTGGCCTTGACCTTGCCGGCAGCTATCTTCATGGTTCCATCAACTCCAATAGCAGTCTTTTTCAACTTGTTCAGTTGCAGAGGCTTGACCTCTCTGACAATAACTTTAGCTTCTCTCAAATACCATCCAGATTAGGCAATGATCTTACTAGTCTAACATATCTCAACCTTTCAATGTCTTCATTTTCTGGCCAAATTCCATCAGAAATTTCATATCTATCCAAGCTGTCTGCCCTTGATCTGACTTCTGATTATATGTTGACACTTGAAAAGGCCAACTTCAGAAGTCTAATTCAAAATTTAACAGACATAAAACAGCTTCATCTTAGTAAGGTCTCCATACCCTCCTCAGTGCCTAATACACTGGTGAATATGTCTTCTCTCACATCTCTCCGTCTTCAAGCATACTTGGGCCACAACCAAATAACTGGTCAAATCCCATCTTGCCTTATGCTTTTGACCCAATTAACTTTGTTAGATGTACGATTCAACAATCTCCAAGGAGCAATTCCCAGGTCACTGTTACAGCTTAAAAGTCTTGAATATATTTTCCTCAACGCAAATAACTTGAGTGGATATGTTCAATTCGATGAGTTTTCCAAGCTCAAAAGGTTGAGGGGACTTCGTTTGTCGCTCAACAAGTTATCTGTGCAGATCAAAACTGGATTTACTGCTATTCTTCCAAAGCTTAATTTACTAGAATTGGGTTCATGCAACTTGACAGAGTTTCCGGAATTTTTGAAATTCAGTAGTGAACTGATGCATCTAGATCTATCTGACAACAATCTTCATGGCCAAATACCAAAATGGATGTGGAATTCAACTAGTGAAACGTTGAGATACCTCAACCTCTCTCACAACCACTTAACTGGATTTGAAGAAAATTCGATCATGATTCCATGGCATCGGTTAAGCTCTTTACAGCTAGACTCTAACATGTTACGAGGATCACTGCCAATTCCAGGGCTGTCAATGGCAGTCTATTCTGTTTCAAACAATGAATATGAAGAAGAAATTCCAGCAACATTCTGTAATGCGGGGACGCTAACTATTCTTGATTTGTCTAACAACAACCTGAATGGCATGATTCCTCAATGTTTTGAGAATTTCGGAGCTCTTCAGATATTGAAACTGCGGAACAATTCTTTTCACGGAGATATTCCTCAAATATGTTCAAACAGATGTACGGAGTTGGCAGCGATTGACTTAAGTTATAATCAGCTACAAGGGAAGCTACCAAGATCAATTGCTAATTGTCCTCAGTTGATGTTTCTTAATTTGGGAAATAATCAGATCAGTGATACCTTCCCCTCTTGGTTAGGAGTGCTTCAACAGTTAAAAATTCTCATTTTGCGGTCCAATATATTTCATGGCATAATTGGAAAGCCTGCAAGTAGCCATGAGTTCCCTAAGCTGTCCATCATTGATTTATCTAGCAATGATTTTTCAGGTCTGTTGCCCTCCAACTACTTAGAGAACTGGAATGCCATGAAATTTGTTGATGAAAACGAGCAAATATACGTCCAATCCGCTGTCATCTTCGGGATGTATCCAGACACGTTCCACTATGATTACCCGATTACAGTTTTTAGCAAAGGTATTCAATTGAAGTATTTCAAGACCCCTTATCTTCTGAGACTCATAGACCTCTCAAGTAACAAATTTGAAGGAGAGATTCCAGGTATCATTGGGAATCTAAGAGGGCTTCATTTGCTCAATCTTTGCAACAACACTCTCACTGGTCCCATCCCCTCATCTTTGGGGAACTTGACTGCTCTTGAATCATTGGATCTCTCCCTAAATCAGCTCTCAGGAAAGATACCCAGTGATCTAGCACAACTGACATTCCTTGCATACTTCAATGTATCCCACAATAGTCTCTATGGTTCAATCCCACAAGGTCGACAGTTTGATACATTCCAAGAGGATATGTACCGAGGAAACTCAGGTTTGTGTGGAAAACCTTTGTCAAAGAAATGTGAGGATTCTGAGAGCGCAACACCACAAACAAACTTTCAACAAGACGAAGACTCTGGGTTTCAAATTGAGCTAGATTGGTTTATGGTGCTGCCAGGAGTTGTTACTGGTCTAATAGTTGGAGTGGTTGGGGAAAACTTTTGGACAGCCAAGAAGCATGATTGGTTTATAAAGGCATTCAGCAGGAGGAGGGAGCCGAGAAGCACAAGGCGGAGGAGGGGACTCAGAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

810

Amino Acids

91.06

Weight (kDa)

6.26

Isoelectric Point (pI)

41.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 89 - 206 6.5e-07 Leucine-rich repeat region
LRR_14 PF23598 171 - 363 1.2e-08 Leucine-rich repeat region
LRR_8 PF13855 414 - 456 5.2e-06 Leucine rich repeat
LRR_8 PF13855 447 - 506 1.2e-07 Leucine rich repeat
LRR_8 PF13855 641 - 701 2.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1437, 2369
AccI GTMKAC 1 cut(s) 2125
AccIII TCCGGA 1 cut(s) 952
AciI CCGC 5 cut(s) 1259, 1357, 1576, 1752, 2410
AclI AACGTT 1 cut(s) 1055
AclWI GGATC 3 cut(s) 19, 1177, 2019
AcoI YGGCCR 3 cut(s) 214, 412, 1015
AcuI CTGAAG 2 cut(s) 487, 1325
AfaI GTAC 4 cut(s) 93, 705, 1408, 2156
AfeI AGCGCT 1 cut(s) 125
AfiI CCNNNNNNNGG 1 cut(s) 1184
AflII CTTAAG 1 cut(s) 1429
AflIII ACRYGT 2 cut(s) 1158, 1779
AhlI ACTAGT 2 cut(s) 371, 1046
AjnI CCWGG 6 cut(s) 17, 111, 734, 1183, 1900, 2293
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
Alw21I GWGCWC 1 cut(s) 1339
Alw26I GTCTC 3 cut(s) 562, 1852, 2105
AlwI GGATC 3 cut(s) 19, 1177, 2019
Aor13HI TCCGGA 1 cut(s) 952
Aor51HI AGCGCT 1 cut(s) 125
AoxI GGCC 6 cut(s) 214, 226, 412, 495, 634, 1015
ApeKI GCWGC 3 cut(s) 243, 1418, 2290
ArsI GACNNNNNNTTYG 2 cut(s) 637, 669
Asp700I GAANNNNTTC 2 cut(s) 1236, 1835
AspLEI GCGC 2 cut(s) 126, 2219
AspS9I GGNCC 3 cut(s) 634, 1578, 1964
AsuHPI GGTGA 1 cut(s) 601
AvaII GGWCC 2 cut(s) 1578, 1964
BalI TGGCCA 3 cut(s) 216, 414, 1017
BanII GRGCYC 1 cut(s) 1339
BbsI GAAGAC 4 cut(s) 393, 591, 611, 2256
Bbv12I GWGCWC 1 cut(s) 1339
BbvI GCAGC 3 cut(s) 255, 1430, 2277
BccI CCATC 7 cut(s) 182, 269, 355, 430, 670, 1649, 1976
BciT130I CCWGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
BciVI GTATCC 2 cut(s) 1782, 2098
BcoDI GTCTC 3 cut(s) 562, 1852, 2105
BcuI ACTAGT 2 cut(s) 371, 1046
BfaI CTAG 9 cut(s) 150, 372, 920, 989, 1047, 1148, 1656, 2054, 2273
BfmI CTRYAG 1 cut(s) 159
BfoI RGCGCY 1 cut(s) 127
BfrI CTTAAG 1 cut(s) 1429
BfuI GTATCC 2 cut(s) 1782, 2098
BglII AGATCT 1 cut(s) 991
BisI GCNGC 3 cut(s) 244, 1419, 2291
BlsI GCNGC 3 cut(s) 245, 1420, 2292
Bme1390I CCNGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
Bme18I GGWCC 2 cut(s) 1578, 1964
BmgT120I GGNCC 3 cut(s) 634, 1578, 1964
BmiI GGNNCC 3 cut(s) 259, 1966, 2394
BmrFI CCNGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
BmrI ACTGGG 1 cut(s) 2040
BmsI GCATC 3 cut(s) 972, 994, 1135
BmuI ACTGGG 1 cut(s) 2040
BpiI GAAGAC 4 cut(s) 393, 591, 611, 2256
Bpu10I CCTNAGC 1 cut(s) 1632
BpuEI CTTGAG 2 cut(s) 811, 1858
BsaI GGTCTC 1 cut(s) 562
BsaJI CCNNGG 5 cut(s) 721, 734, 1121, 1184, 2158
BsaWI WCCGGW 1 cut(s) 952
Bsc4I CCNNNNNNNGG 1 cut(s) 1184
Bse118I RCCGGY 1 cut(s) 239
Bse1I ACTGG 8 cut(s) 591, 655, 889, 1096, 1706, 1966, 2046, 2311
Bse3DI GCAATG 2 cut(s) 367, 1666
BseAI TCCGGA 1 cut(s) 952
BseBI CCWGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
BseDI CCNNGG 5 cut(s) 721, 734, 1121, 1184, 2158
BseGI GGATG 7 cut(s) 14, 121, 193, 347, 1038, 1773, 1968
BseLI CCNNNNNNNGG 1 cut(s) 1184
BseMI GCAATG 2 cut(s) 367, 1666
BseMII CTCAG 6 cut(s) 585, 1496, 1847, 2046, 2181, 2202
BseNI ACTGG 8 cut(s) 591, 655, 889, 1096, 1706, 1966, 2046, 2311
BseRI GAGGAG 3 cut(s) 559, 2401, 2428
BseXI GCAGC 3 cut(s) 255, 1430, 2277
BsgI GTGCAG 1 cut(s) 893
BshFI GGCC 6 cut(s) 216, 228, 414, 497, 636, 1017
BsiHKAI GWGCWC 1 cut(s) 1339
BsiSI CCGG 2 cut(s) 240, 953
BslFI GGGAC 3 cut(s) 855, 1276, 1950
BslI CCNNNNNNNGG 1 cut(s) 1184
BsmAI GTCTC 3 cut(s) 562, 1852, 2105
BsmFI GGGAC 3 cut(s) 855, 1276, 1950
BsmI GAATGC 3 cut(s) 203, 1711, 2375
BsnI GGCC 6 cut(s) 216, 228, 414, 497, 636, 1017
Bso31I GGTCTC 1 cut(s) 562
Bsp1286I GDGCHC 1 cut(s) 1339
Bsp13I TCCGGA 1 cut(s) 952
Bsp1407I TGTACA 1 cut(s) 91
Bsp19I CCATGG 1 cut(s) 1121
BspACI CCGC 5 cut(s) 1259, 1357, 1576, 1752, 2410
BspANI GGCC 6 cut(s) 216, 228, 414, 497, 636, 1017
BspCNI CTCAG 6 cut(s) 584, 1495, 1848, 2045, 2180, 2203
BspEI TCCGGA 1 cut(s) 952
BspHI TCATGA 1 cut(s) 1113
BspLI GGNNCC 3 cut(s) 259, 1966, 2394
BspPI GGATC 3 cut(s) 19, 1177, 2019
BspQI GCTCTTC 1 cut(s) 1344
BspTI CTTAAG 1 cut(s) 1429
BspTNI GGTCTC 1 cut(s) 562
BsrDI GCAATG 2 cut(s) 367, 1666
BsrFI RCCGGY 1 cut(s) 239
BsrGI TGTACA 1 cut(s) 91
BsrI ACTGG 8 cut(s) 591, 655, 889, 1096, 1706, 1966, 2046, 2311
BssAI RCCGGY 1 cut(s) 239
BssECI CCNNGG 5 cut(s) 721, 734, 1121, 1184, 2158
BssT1I CCWWGG 2 cut(s) 721, 1121
Bst2UI CCWGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
Bst4CI ACNGT 5 cut(s) 176, 744, 1557, 1807, 2130
Bst6I CTCTTC 1 cut(s) 1344
BstAFI CTTAAG 1 cut(s) 1429
BstAUI TGTACA 1 cut(s) 91
BstC8I GCNNGC 3 cut(s) 76, 241, 1611
BstDSI CCRYGG 1 cut(s) 1121
BstF5I GGATG 7 cut(s) 14, 121, 193, 347, 1038, 1773, 1968
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 2 cut(s) 126, 2219
BstMAI GTCTC 3 cut(s) 562, 1852, 2105
BstMWI GCNNNNNNNGC 2 cut(s) 58, 1933
BstNI CCWGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
BstNSI RCATGY 2 cut(s) 78, 1162
BstSCI CCNGG 6 cut(s) 17, 111, 734, 1183, 1900, 2293
BstSFI CTRYAG 1 cut(s) 159
BstV1I GCAGC 3 cut(s) 255, 1430, 2277
BstV2I GAAGAC 4 cut(s) 393, 591, 611, 2256
BstX2I RGATCY 2 cut(s) 991, 2011
BstXI CCANNNNNNTGG 3 cut(s) 224, 650, 1091
BstYI RGATCY 2 cut(s) 991, 2011
BsuI GTATCC 2 cut(s) 1782, 2098
BsuRI GGCC 6 cut(s) 216, 228, 414, 497, 636, 1017
BtgI CCRYGG 1 cut(s) 1121
BtsCI GGATG 7 cut(s) 14, 121, 193, 347, 1038, 1773, 1968
BtsI GCAGTG 1 cut(s) 1172
BtsIMutI CAGTG 7 cut(s) 579, 584, 740, 1172, 1525, 1959, 2053
Cac8I GCNNGC 3 cut(s) 76, 241, 1611
CciI TCATGA 1 cut(s) 1113
CfoI GCGC 2 cut(s) 126, 2219
Cfr10I RCCGGY 1 cut(s) 239
Cfr13I GGNCC 3 cut(s) 634, 1578, 1964
CseI GACGC 2 cut(s) 106, 1273
Csp6I GTAC 4 cut(s) 92, 704, 1407, 2155
CviQI GTAC 4 cut(s) 92, 704, 1407, 2155
EaeI YGGCCR 3 cut(s) 214, 412, 1015
Eam1104I CTCTTC 1 cut(s) 1344
EarI CTCTTC 1 cut(s) 1344
EciI GGCGGA 1 cut(s) 2425
Ecl136II GAGCTC 1 cut(s) 1337
Eco130I CCWWGG 2 cut(s) 721, 1121
Eco24I GRGCYC 1 cut(s) 1339
Eco31I GGTCTC 1 cut(s) 562
Eco47I GGWCC 2 cut(s) 1578, 1964
Eco47III AGCGCT 1 cut(s) 125
Eco53kI GAGCTC 1 cut(s) 1337
Eco57I CTGAAG 2 cut(s) 487, 1325
EcoICRI GAGCTC 1 cut(s) 1337
EcoRI GAATTC 1 cut(s) 1039
EcoRII CCWGG 6 cut(s) 17, 111, 734, 1183, 1900, 2293
EcoT14I CCWWGG 2 cut(s) 721, 1121
EcoT22I ATGCAT 1 cut(s) 987
EcoT38I GRGCYC 1 cut(s) 1339
ErhI CCWWGG 2 cut(s) 721, 1121
FalI AAGNNNNNCTT 2 cut(s) 485, 517
FaqI GGGAC 3 cut(s) 855, 1276, 1950
FauI CCCGC 1 cut(s) 1252
FblI GTMKAC 1 cut(s) 2125
Fnu4HI GCNGC 3 cut(s) 244, 1419, 2291
FokI GGATG 6 cut(s) 128, 200, 334, 1045, 1780, 1955
FriOI GRGCYC 1 cut(s) 1339
Fsp4HI GCNGC 3 cut(s) 244, 1419, 2291
FspBI CTAG 9 cut(s) 150, 372, 920, 989, 1047, 1148, 1656, 2054, 2273
GlaI GCGC 2 cut(s) 125, 2218
GluI GCNGC 3 cut(s) 244, 1419, 2291
HaeII RGCGCY 1 cut(s) 127
HaeIII GGCC 6 cut(s) 216, 228, 414, 497, 636, 1017
HapII CCGG 2 cut(s) 240, 953
HgaI GACGC 2 cut(s) 106, 1273
HhaI GCGC 2 cut(s) 126, 2219
Hin6I GCGC 2 cut(s) 124, 2217
HinP1I GCGC 2 cut(s) 124, 2217
HincII GTYRAC 2 cut(s) 483, 2126
HindII GTYRAC 2 cut(s) 483, 2126
HindIII AAGCTT 1 cut(s) 908
HpaII CCGG 2 cut(s) 240, 953
HphI GGTGA 1 cut(s) 601
Hpy166II GTNNAC 3 cut(s) 483, 977, 2126
Hpy8I GTNNAC 3 cut(s) 483, 977, 2126
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 2 cut(s) 1537, 1883
HpyCH4III ACNGT 5 cut(s) 176, 744, 1557, 1807, 2130
HpyCH4IV ACGT 4 cut(s) 207, 1055, 1743, 1781
HpyF10VI GCNNNNNNNGC 2 cut(s) 58, 1933
HpySE526I ACGT 4 cut(s) 207, 1055, 1743, 1781
HspAI GCGC 2 cut(s) 124, 2217
Kpn2I TCCGGA 1 cut(s) 952
KroI GCCGGC 1 cut(s) 239
KroNI GCCGGC 1 cut(s) 241
LguI GCTCTTC 1 cut(s) 1344
LmnI GCTCC 3 cut(s) 725, 1334, 2392
Lsp1109I GCAGC 3 cut(s) 255, 1430, 2277
LweI GCATC 3 cut(s) 972, 994, 1135
MaeI CTAG 9 cut(s) 150, 372, 920, 989, 1047, 1148, 1656, 2054, 2273
MaeII ACGT 4 cut(s) 207, 1055, 1743, 1781
MaeIII GTNAC 6 cut(s) 170, 738, 744, 1161, 1877, 2302
MfeI CAATTG 2 cut(s) 1467, 1826
MflI RGATCY 2 cut(s) 991, 2011
MhlI GDGCHC 1 cut(s) 1339
MlsI TGGCCA 3 cut(s) 216, 414, 1017
MluNI TGGCCA 3 cut(s) 216, 414, 1017
MlyI GAGTC 4 cut(s) 1145, 1854, 2246, 2415
MmeI TCCRAC 2 cut(s) 1710, 2299
Mox20I TGGCCA 3 cut(s) 216, 414, 1017
Mph1103I ATGCAT 1 cut(s) 987
MroI TCCGGA 1 cut(s) 952
MroNI GCCGGC 1 cut(s) 239
MroXI GAANNNNTTC 2 cut(s) 1236, 1835
MscI TGGCCA 3 cut(s) 216, 414, 1017
MslI CAYNNNNRTG 1 cut(s) 19
Msp20I TGGCCA 3 cut(s) 216, 414, 1017
MspA1I CMGCKG 1 cut(s) 1754
MspCI CTTAAG 1 cut(s) 1429
MspI CCGG 2 cut(s) 240, 953
MspR9I CCNGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
MunI CAATTG 2 cut(s) 1467, 1826
Mva1269I GAATGC 3 cut(s) 203, 1711, 2375
MvaI CCWGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
MwoI GCNNNNNNNGC 2 cut(s) 58, 1933
NaeI GCCGGC 1 cut(s) 241
NcoI CCATGG 1 cut(s) 1121
NgoMIV GCCGGC 1 cut(s) 239
NlaIV GGNNCC 3 cut(s) 259, 1966, 2394
NmeAIII GCCGAG 1 cut(s) 2421
NmuCI GTSAC 1 cut(s) 738
NsiI ATGCAT 1 cut(s) 987
NspI RCATGY 2 cut(s) 78, 1162
PaeI GCATGC 1 cut(s) 78
PagI TCATGA 1 cut(s) 1113
PciI ACATGT 1 cut(s) 1158
PciSI GCTCTTC 1 cut(s) 1344
PctI GAATGC 3 cut(s) 203, 1711, 2375
PdiI GCCGGC 1 cut(s) 241
PdmI GAANNNNTTC 2 cut(s) 1236, 1835
PfeI GAWTC 7 cut(s) 708, 1117, 1309, 1897, 1915, 2003, 2207
PkrI GCNGC 3 cut(s) 245, 1420, 2292
PleI GAGTC 4 cut(s) 1145, 1854, 2246, 2415
PpsI GAGTC 4 cut(s) 1145, 1854, 2246, 2415
PscI ACATGT 1 cut(s) 1158
PsiI TTATAA 2 cut(s) 1437, 2369
Psp124BI GAGCTC 1 cut(s) 1339
Psp1406I AACGTT 1 cut(s) 1055
Psp6I CCWGG 6 cut(s) 17, 111, 734, 1183, 1900, 2293
PspGI CCWGG 6 cut(s) 17, 111, 734, 1183, 1900, 2293
PspN4I GGNNCC 3 cut(s) 259, 1966, 2394
PspPI GGNCC 3 cut(s) 634, 1578, 1964
PsrI GAACNNNNNNTAC 2 cut(s) 163, 195
PsuI RGATCY 2 cut(s) 991, 2011
RsaI GTAC 4 cut(s) 93, 705, 1408, 2156
RsaNI GTAC 4 cut(s) 92, 704, 1407, 2155
RseI CAYNNNNRTG 1 cut(s) 19
SacI GAGCTC 1 cut(s) 1339
SalI GTCGAC 1 cut(s) 2124
SapI GCTCTTC 1 cut(s) 1344
SatI GCNGC 3 cut(s) 244, 1419, 2291
Sau96I GGNCC 3 cut(s) 634, 1578, 1964
SchI GAGTC 4 cut(s) 1145, 1854, 2246, 2415
ScrFI CCNGG 6 cut(s) 19, 113, 736, 1185, 1902, 2295
SduI GDGCHC 1 cut(s) 1339
SfaNI GCATC 3 cut(s) 972, 994, 1135
SfcI CTRYAG 1 cut(s) 159
SinI GGWCC 2 cut(s) 1578, 1964
SmiMI CAYNNNNRTG 1 cut(s) 19
SmlI CTYRAG 3 cut(s) 790, 1429, 1873
SmoI CTYRAG 3 cut(s) 790, 1429, 1873
SpeI ACTAGT 2 cut(s) 371, 1046
SphI GCATGC 1 cut(s) 78
SsiI CCGC 5 cut(s) 1259, 1357, 1576, 1752, 2410
SspMI CTAG 9 cut(s) 150, 372, 920, 989, 1047, 1148, 1656, 2054, 2273
SstI GAGCTC 1 cut(s) 1339
StyD4I CCNGG 6 cut(s) 17, 111, 734, 1183, 1900, 2293
StyI CCWWGG 2 cut(s) 721, 1121
TaaI ACNGT 5 cut(s) 176, 744, 1557, 1807, 2130
TaiI ACGT 4 cut(s) 210, 1058, 1746, 1784
TaqI TCGA 3 cut(s) 810, 1109, 2125
TatI WGTACW 1 cut(s) 91
TfiI GAWTC 7 cut(s) 708, 1117, 1309, 1897, 1915, 2003, 2207
TscAI CASTG 7 cut(s) 579, 591, 747, 1179, 1525, 1966, 2053
TseFI GTSAC 1 cut(s) 738
TseI GCWGC 3 cut(s) 243, 1418, 2290
Tsp45I GTSAC 1 cut(s) 738
TspGWI ACGGA 3 cut(s) 605, 1389, 1424
TspRI CASTG 7 cut(s) 579, 591, 747, 1179, 1525, 1966, 2053
Vha464I CTTAAG 1 cut(s) 1429
VpaK11BI GGWCC 2 cut(s) 1578, 1964
XbaI TCTAGA 1 cut(s) 988
XceI RCATGY 2 cut(s) 78, 1162
XcmI CCANNNNNNNNNTGG 1 cut(s) 1032
XmiI GTMKAC 1 cut(s) 2125
XmnI GAANNNNTTC 2 cut(s) 1236, 1835
XspI CTAG 9 cut(s) 150, 372, 920, 989, 1047, 1148, 1656, 2054, 2273
Zsp2I ATGCAT 1 cut(s) 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.