Rmu_sc0002709.1_g000043

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002709.1
Physical Location & Seq
Forward (+)
154145 .. 155533
1389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002709.1_g000043.1.cds

Sequence Viewer

Length: 1389 bp
atgagcacagaatccttggttcacctagatatttcttataatttcctgtcaggccaacttcctgttttctttccttgggtcaaccaactacacttgggtctttcttccaacatgttccatgggccactgccgatacctgcatcatccactttagtctatgaagctcataacaacaaatttactggaaagctttcaccagtgatctgcaatatgagttctcttcgggcccttgaattggacaataacaacttgagtggcatgattctgcagtgtttcggaaacttcagtgatccattgacacttctacttcttcgaaataactcgtttcatggcactctaccacaaacatacaccaacaaaagcaacttgaggatacttgatgtgagtcaaaatcaattgcaagggcaactgccaaggtcattggccaattgtctgatgcttgagactttggtcctgtcaaacaattacttcaatgatgtctttcccttttggatggctactctacctgagttgaaacttttggcaatgcggcataatgcgttccaaggattgataggaaagggtgaaaacaatcagcggttcccaaagttgcgtgtctttgatatttctcacaataacttcacaggcaaatttgtagctgaatacgtcttctccaagtatgccatgagatcagttaaccagtcgacctatatctcggttgtcatcaattacaactctggtaatgattggctcggtcatgaagcttatgattccacgattaatataaccattaaaggtgtggatagatactatccaaggattcaagaagcttttgcagtcattgatatctcaagcaacaaatttgaagggaagattgatgaatccattgggagtctaaaagggctttggtcccttaatttttccaataatcttctcagtggtcgtatcccgtcatcgtttgggaacttgacgaatcttgaagtactagacctttccaataacaagctctggggagagattcccaaacaattggcacagctgacattccttgcacaattcaatgtctctcacaacaatctcacaggtccaataccgcgtggaccgcaactcaataccttctctatcaattcatataagggaaatcctggattgtgcggagatcctttgccaaagagatgtcagagctctaatgccccaccggaactgccaccttcaaacacagaagaaaatgattctggaagtgaatttgaatgggcttttgtgctcgctggatgcggaagtgggttcgtggtgggagttgtgcttgcggacttggccatcacacggaggcgtgagttctttcttgagatagttggaacgttgatcagactaatggaaaggatcacaagccggaaggggtttggacgctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

462

Amino Acids

51.58

Weight (kDa)

7.65

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 39
Acc36I ACCTGC 1 cut(s) 145
AccI GTMKAC 1 cut(s) 683
AccII CGCG 1 cut(s) 1075
AciI CCGC 7 cut(s) 529, 577, 1073, 1082, 1134, 1254, 1286
AclI AACGTT 1 cut(s) 1337
AclWI GGATC 3 cut(s) 284, 1133, 1367
AcoI YGGCCR 2 cut(s) 423, 1293
AcsI RAATTY 4 cut(s) 176, 629, 839, 1223
AcuI CTGAAG 1 cut(s) 268
AfaI GTAC 1 cut(s) 963
AfiI CCNNNNNNNGG 2 cut(s) 235, 1302
AflIII ACRYGT 1 cut(s) 111
AgsI TTSAA 9 cut(s) 233, 472, 514, 803, 845, 959, 1039, 1194, 1229
AjnI CCWGG 1 cut(s) 1123
AluBI AGCT 8 cut(s) 164, 190, 638, 743, 809, 985, 1018, 1164
AluI AGCT 8 cut(s) 164, 190, 638, 743, 809, 985, 1018, 1164
Alw21I GWGCWC 3 cut(s) 8, 1166, 1245
Alw26I GTCTC 2 cut(s) 437, 1048
AlwI GGATC 3 cut(s) 284, 1133, 1367
AoxI GGCC 5 cut(s) 52, 122, 225, 423, 1293
ApaI GGGCCC 1 cut(s) 229
ApoI RAATTY 4 cut(s) 176, 629, 839, 1223
AseI ATTAAT 1 cut(s) 759
Asp700I GAANNNNTTC 1 cut(s) 190
AspS9I GGNCC 7 cut(s) 122, 225, 226, 451, 888, 1064, 1079
AsuHPI GGTGA 3 cut(s) 14, 186, 575
AsuII TTCGAA 1 cut(s) 313
AvaII GGWCC 4 cut(s) 451, 888, 1064, 1079
BaeGI GKGCMC 1 cut(s) 229
BalI TGGCCA 2 cut(s) 425, 1295
BanII GRGCYC 2 cut(s) 229, 1166
BbsI GAAGAC 1 cut(s) 640
Bbv12I GWGCWC 3 cut(s) 8, 1166, 1245
BccI CCATC 2 cut(s) 487, 1304
BciT130I CCWGG 1 cut(s) 1125
BciVI GTATCC 2 cut(s) 366, 935
BclI TGATCA 1 cut(s) 1341
BcoDI GTCTC 2 cut(s) 437, 1048
BfaI CTAG 2 cut(s) 26, 965
BfmI CTRYAG 1 cut(s) 266
BfuAI ACCTGC 1 cut(s) 145
BfuI GTATCC 2 cut(s) 366, 935
BisI GCNGC 1 cut(s) 530
BlsI GCNGC 1 cut(s) 531
BmcAI AGTACT 1 cut(s) 963
Bme1390I CCNGG 1 cut(s) 1125
Bme18I GGWCC 4 cut(s) 451, 888, 1064, 1079
BmgT120I GGNCC 7 cut(s) 122, 225, 226, 451, 888, 1064, 1079
BmiI GGNNCC 3 cut(s) 227, 581, 890
BmrFI CCNGG 1 cut(s) 1125
BmsI GCATC 3 cut(s) 149, 426, 1241
BoxI GACNNNNGTC 1 cut(s) 449
BpiI GAAGAC 1 cut(s) 640
Bpu14I TTCGAA 1 cut(s) 313
BpuEI CTTGAG 5 cut(s) 271, 388, 461, 814, 1343
BsaJI CCNNGG 6 cut(s) 15, 74, 118, 413, 544, 794
BsaWI WCCGGW 1 cut(s) 1177
BsaXI ACNNNNNCTCC 2 cut(s) 635, 665
Bsc4I CCNNNNNNNGG 2 cut(s) 235, 1302
Bse1I ACTGG 3 cut(s) 187, 197, 679
Bse3DI GCAATG 1 cut(s) 531
BseBI CCWGG 1 cut(s) 1125
BseDI CCNNGG 6 cut(s) 15, 74, 118, 413, 544, 794
BseGI GGATG 3 cut(s) 143, 498, 1256
BseLI CCNNNNNNNGG 2 cut(s) 235, 1302
BseMI GCAATG 1 cut(s) 531
BseMII CTCAG 2 cut(s) 498, 928
BseNI ACTGG 3 cut(s) 187, 197, 679
BseSI GKGCMC 1 cut(s) 229
Bsh1236I CGCG 1 cut(s) 1075
BshFI GGCC 5 cut(s) 54, 124, 227, 425, 1295
BsiHKAI GWGCWC 3 cut(s) 8, 1166, 1245
BsiSI CCGG 2 cut(s) 1178, 1369
BslFI GGGAC 1 cut(s) 874
BslI CCNNNNNNNGG 2 cut(s) 235, 1302
BsmAI GTCTC 2 cut(s) 437, 1048
BsmFI GGGAC 1 cut(s) 874
BsnI GGCC 5 cut(s) 54, 124, 227, 425, 1295
Bsp119I TTCGAA 1 cut(s) 313
Bsp120I GGGCCC 1 cut(s) 225
Bsp1286I GDGCHC 4 cut(s) 8, 229, 1166, 1245
Bsp143I GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
Bsp19I CCATGG 1 cut(s) 118
BspACI CCGC 7 cut(s) 529, 577, 1073, 1082, 1134, 1254, 1286
BspANI GGCC 5 cut(s) 54, 124, 227, 425, 1295
BspCNI CTCAG 2 cut(s) 499, 927
BspFNI CGCG 1 cut(s) 1075
BspHI TCATGA 1 cut(s) 736
BspLI GGNNCC 3 cut(s) 227, 581, 890
BspMAI CTGCAG 1 cut(s) 270
BspMI ACCTGC 1 cut(s) 145
BspPI GGATC 3 cut(s) 284, 1133, 1367
BspT104I TTCGAA 1 cut(s) 313
BsrDI GCAATG 1 cut(s) 531
BsrI ACTGG 3 cut(s) 187, 197, 679
BssECI CCNNGG 6 cut(s) 15, 74, 118, 413, 544, 794
BssMI GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
BssT1I CCWWGG 6 cut(s) 15, 74, 118, 413, 544, 794
Bst2UI CCWGG 1 cut(s) 1125
Bst6I CTCTTC 1 cut(s) 225
BstBI TTCGAA 1 cut(s) 313
BstC8I GCNNGC 2 cut(s) 1245, 1284
BstDEI CTNAG 2 cut(s) 507, 914
BstDSI CCRYGG 1 cut(s) 118
BstF5I GGATG 3 cut(s) 143, 498, 1256
BstFNI CGCG 1 cut(s) 1075
BstKTI GATC 6 cut(s) 204, 292, 671, 1141, 1344, 1362
BstMAI GTCTC 2 cut(s) 437, 1048
BstMBI GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
BstMWI GCNNNNNNNGC 2 cut(s) 1081, 1292
BstNI CCWGG 1 cut(s) 1125
BstNSI RCATGY 1 cut(s) 115
BstPAI GACNNNNGTC 1 cut(s) 449
BstSCI CCNGG 1 cut(s) 1123
BstSFI CTRYAG 1 cut(s) 266
BstSLI GKGCMC 1 cut(s) 229
BstUI CGCG 1 cut(s) 1075
BstV2I GAAGAC 1 cut(s) 640
BstX2I RGATCY 1 cut(s) 1138
BstXI CCANNNNNNTGG 1 cut(s) 1009
BstYI RGATCY 1 cut(s) 1138
BsuI GTATCC 2 cut(s) 366, 935
BsuRI GGCC 5 cut(s) 54, 124, 227, 425, 1295
BtgI CCRYGG 1 cut(s) 118
BtsCI GGATG 3 cut(s) 143, 498, 1256
BtsI GCAGTG 2 cut(s) 125, 275
BtsIMutI CAGTG 5 cut(s) 125, 204, 275, 292, 922
BveI ACCTGC 1 cut(s) 145
Cac8I GCNNGC 2 cut(s) 1245, 1284
CciI TCATGA 1 cut(s) 736
Cfr13I GGNCC 7 cut(s) 122, 225, 226, 451, 888, 1064, 1079
Csp6I GTAC 1 cut(s) 962
CspCI CAANNNNNGTGG 2 cut(s) 235, 270
CviAII CATG 6 cut(s) 112, 119, 259, 329, 664, 737
CviQI GTAC 1 cut(s) 962
DdeI CTNAG 2 cut(s) 507, 914
DpnI GATC 6 cut(s) 203, 291, 670, 1140, 1343, 1361
DpnII GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
EaeI YGGCCR 2 cut(s) 423, 1293
Eam1104I CTCTTC 1 cut(s) 225
EarI CTCTTC 1 cut(s) 225
Ecl136II GAGCTC 1 cut(s) 1164
Eco130I CCWWGG 6 cut(s) 15, 74, 118, 413, 544, 794
Eco24I GRGCYC 2 cut(s) 229, 1166
Eco32I GATATC 1 cut(s) 826
Eco47I GGWCC 4 cut(s) 451, 888, 1064, 1079
Eco53kI GAGCTC 1 cut(s) 1164
Eco57I CTGAAG 1 cut(s) 268
EcoICRI GAGCTC 1 cut(s) 1164
EcoO109I RGGNCCY 1 cut(s) 226
EcoRII CCWGG 1 cut(s) 1123
EcoRV GATATC 1 cut(s) 826
EcoT14I CCWWGG 6 cut(s) 15, 74, 118, 413, 544, 794
EcoT38I GRGCYC 2 cut(s) 229, 1166
ErhI CCWWGG 6 cut(s) 15, 74, 118, 413, 544, 794
FaeI CATG 6 cut(s) 115, 122, 262, 332, 667, 740
FaqI GGGAC 1 cut(s) 874
FatI CATG 6 cut(s) 111, 118, 258, 328, 663, 736
FbaI TGATCA 1 cut(s) 1341
FblI GTMKAC 1 cut(s) 683
Fnu4HI GCNGC 1 cut(s) 530
FokI GGATG 3 cut(s) 130, 505, 1263
FriOI GRGCYC 2 cut(s) 229, 1166
Fsp4HI GCNGC 1 cut(s) 530
FspBI CTAG 2 cut(s) 26, 965
GluI GCNGC 1 cut(s) 530
HaeIII GGCC 5 cut(s) 54, 124, 227, 425, 1295
HapII CCGG 2 cut(s) 1178, 1369
Hin1II CATG 6 cut(s) 115, 122, 262, 332, 667, 740
HincII GTYRAC 3 cut(s) 82, 676, 684
HindII GTYRAC 3 cut(s) 82, 676, 684
HindIII AAGCTT 3 cut(s) 188, 741, 807
HpaI GTTAAC 1 cut(s) 676
HpaII CCGG 2 cut(s) 1178, 1369
HphI GGTGA 3 cut(s) 14, 186, 575
Hpy166II GTNNAC 5 cut(s) 22, 82, 676, 684, 1079
Hpy188I TCNGA 4 cut(s) 278, 435, 1161, 1346
Hpy188III TCNNGA 5 cut(s) 737, 803, 956, 1215, 1322
Hpy8I GTNNAC 5 cut(s) 22, 82, 676, 684, 1079
HpyAV CCTTC 4 cut(s) 839, 1105, 1200, 1366
HpyCH4IV ACGT 2 cut(s) 645, 1337
HpyCH4V TGCA 6 cut(s) 140, 207, 268, 400, 815, 1031
HpyF10VI GCNNNNNNNGC 2 cut(s) 1081, 1292
HpyF3I CTNAG 2 cut(s) 507, 914
HpySE526I ACGT 2 cut(s) 645, 1337
Hsp92II CATG 6 cut(s) 115, 122, 262, 332, 667, 740
Ksp22I TGATCA 1 cut(s) 1341
KspAI GTTAAC 1 cut(s) 676
Kzo9I GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
LweI GCATC 3 cut(s) 149, 426, 1241
MaeI CTAG 2 cut(s) 26, 965
MaeII ACGT 2 cut(s) 645, 1337
MalI GATC 6 cut(s) 203, 291, 670, 1140, 1343, 1361
MboI GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
MboII GAAGA 7 cut(s) 96, 212, 302, 640, 862, 902, 1214
MfeI CAATTG 3 cut(s) 395, 427, 1007
MflI RGATCY 1 cut(s) 1138
MhlI GDGCHC 4 cut(s) 8, 229, 1166, 1245
MlsI TGGCCA 2 cut(s) 425, 1295
MluNI TGGCCA 2 cut(s) 425, 1295
MlyI GAGTC 2 cut(s) 394, 880
MmeI TCCRAC 2 cut(s) 132, 1312
MnlI CCTC 2 cut(s) 363, 1299
Mox20I TGGCCA 2 cut(s) 425, 1295
MroXI GAANNNNTTC 1 cut(s) 190
MscI TGGCCA 2 cut(s) 425, 1295
MseI TTAA 4 cut(s) 675, 759, 771, 894
Msp20I TGGCCA 2 cut(s) 425, 1295
MspA1I CMGCKG 2 cut(s) 577, 1018
MspI CCGG 2 cut(s) 1178, 1369
MspR9I CCNGG 1 cut(s) 1125
MunI CAATTG 3 cut(s) 395, 427, 1007
MvaI CCWGG 1 cut(s) 1125
MvnI CGCG 1 cut(s) 1075
MwoI GCNNNNNNNGC 2 cut(s) 1081, 1292
NcoI CCATGG 1 cut(s) 118
NdeII GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
NlaIII CATG 6 cut(s) 115, 122, 262, 332, 667, 740
NlaIV GGNNCC 3 cut(s) 227, 581, 890
NspI RCATGY 1 cut(s) 115
NspV TTCGAA 1 cut(s) 313
PagI TCATGA 1 cut(s) 736
PciI ACATGT 1 cut(s) 111
PdmI GAANNNNTTC 1 cut(s) 190
PfeI GAWTC 8 cut(s) 11, 262, 749, 799, 860, 952, 997, 1211
PfoI TCCNGGA 1 cut(s) 1123
PkrI GCNGC 1 cut(s) 531
PleI GAGTC 2 cut(s) 393, 879
PpsI GAGTC 2 cut(s) 393, 879
PscI ACATGT 1 cut(s) 111
PshAI GACNNNNGTC 1 cut(s) 449
PshBI ATTAAT 1 cut(s) 759
PsiI TTATAA 1 cut(s) 39
Psp124BI GAGCTC 1 cut(s) 1166
Psp1406I AACGTT 1 cut(s) 1337
Psp6I CCWGG 1 cut(s) 1123
PspGI CCWGG 1 cut(s) 1123
PspN4I GGNNCC 3 cut(s) 227, 581, 890
PspOMI GGGCCC 1 cut(s) 225
PspPI GGNCC 7 cut(s) 122, 225, 226, 451, 888, 1064, 1079
PstI CTGCAG 1 cut(s) 270
PsuI RGATCY 1 cut(s) 1138
PvuII CAGCTG 1 cut(s) 1018
RsaI GTAC 1 cut(s) 963
RsaNI GTAC 1 cut(s) 962
SacI GAGCTC 1 cut(s) 1166
SalI GTCGAC 1 cut(s) 682
SaqAI TTAA 4 cut(s) 675, 759, 771, 894
SatI GCNGC 1 cut(s) 530
Sau3AI GATC 6 cut(s) 201, 289, 668, 1138, 1341, 1359
Sau96I GGNCC 7 cut(s) 122, 225, 226, 451, 888, 1064, 1079
ScaI AGTACT 1 cut(s) 963
SchI GAGTC 2 cut(s) 394, 880
ScrFI CCNGG 1 cut(s) 1125
SduI GDGCHC 4 cut(s) 8, 229, 1166, 1245
SfaNI GCATC 3 cut(s) 149, 426, 1241
SfcI CTRYAG 1 cut(s) 266
SfuI TTCGAA 1 cut(s) 313
SinI GGWCC 4 cut(s) 451, 888, 1064, 1079
SmlI CTYRAG 5 cut(s) 250, 367, 440, 829, 1322
SmoI CTYRAG 5 cut(s) 250, 367, 440, 829, 1322
SsiI CCGC 7 cut(s) 529, 577, 1073, 1082, 1134, 1254, 1286
SspMI CTAG 2 cut(s) 26, 965
SstI GAGCTC 1 cut(s) 1166
StyD4I CCNGG 1 cut(s) 1123
StyI CCWWGG 6 cut(s) 15, 74, 118, 413, 544, 794
TaiI ACGT 2 cut(s) 648, 1340
TaqI TCGA 2 cut(s) 313, 683
TaqII GACCGA 1 cut(s) 722
TatI WGTACW 1 cut(s) 961
TauI GCSGC 1 cut(s) 532
TfiI GAWTC 8 cut(s) 11, 262, 749, 799, 860, 952, 997, 1211
Tru1I TTAA 4 cut(s) 675, 759, 771, 894
Tru9I TTAA 4 cut(s) 675, 759, 771, 894
TscAI CASTG 5 cut(s) 132, 204, 275, 292, 922
TspDTI ATGAA 5 cut(s) 174, 317, 753, 873, 1098
TspGWI ACGGA 1 cut(s) 1318
TspRI CASTG 5 cut(s) 132, 204, 275, 292, 922
VpaK11BI GGWCC 4 cut(s) 451, 888, 1064, 1079
VspI ATTAAT 1 cut(s) 759
XapI RAATTY 4 cut(s) 176, 629, 839, 1223
XceI RCATGY 1 cut(s) 115
XcmI CCANNNNNNNNNTGG 1 cut(s) 775
XmiI GTMKAC 1 cut(s) 683
XmnI GAANNNNTTC 1 cut(s) 190
XspI CTAG 2 cut(s) 26, 965
ZrmI AGTACT 1 cut(s) 963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.