Rw2G042020

Leucine rich repeat N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000024
Physical Location & Seq
Forward (+)
68236687 .. 68239978
3292 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G042020.1

Sequence Viewer

Length: 3174 bp
ATGGGATCATCCTGGTGGGGCTTCTTTTCTATCCGTTATATTATACTCCTGTTGCTCATTAATACCGCATGCTGTTTTTCTTTGGTACAAACGCAGACCCGTTGCCACGATGATGAAAGCTCTGCCTTGTTGCAATTCAAAGCTAGTTTCACTATAGACAAGTCAGCTTCCCAAGATCCCTTTGCTTATCCGAAAGTTGCATCCTGGGGTAGGGTAGAAGGAGATCCTCAAAGGAGTAACTGTTGTTCATGGGATGGTGTCGAATGCGACCACCACTCTGGCCATGTTATTGGCCTTGACCTCGCCAGCAGCTATCTTCATGGTTCCATCAACTCCAATAGCAGTCTTTTTCAACTTGTTCAGTTGCAGAGGCTTGACCTCTCTGACAACAACTTCAGCCACTCTCAAATACCATCCAGGTTAGGCCATGATCTTATTAGTCTAACATATCTCAACCTATCAATGTCTTCAATTTCTGGCCAAATTCCATCAGAAATTTCATATCTATCCAAGCTGTCTGCCCTTGATCTGTCTTCTAGTTATGAGTCTCATCTCAAAATGTCCAACTTCGGAAGCCTGGTTCAGAACTTGACCAACATAAAACAACTTCATCTTAGTTGGGTAGAGATAGGCTCCACAGTGCCTAATACGTTGGTGAATGTGTCCTCTCTCATATCTCTCCGTCTTCAAGTATGTAACTTGGAAGGCCAATTCCCAGTAGGCATTTTCCACCTACCAAACTTGCAAGTACTTGATTTGGCCTATAACCGCAATCTAACCGGTTACTTTCCTGAAGAGCTTAACAAGAGCAGTCCCTTGAAGATACTAAATTTGCGGTCAACCAATTTCTCTGGTCATCTACCTGCTTCAATCGGAGACCTTCCTGCCCTAAATTTGTTGTACATAGGATACTGTAACTTTTATCCCCATGTTCCATCTTCACTTTCCAACCTTACCCAGCTCAATTTCCTTGATCTTTCCTACTTTTTCAACAACCAGGGAAATTTCAGTGGCCAAGTTACTGATTCCTTATCTTGGGTTGGAAAGCTGACCAGACTTACCAATTTGTTCCTTGGGTATAACAACTTAAGGGGAGATTTCCCATGTTTTTTGGCGAATCTGAAGCAACTTGTGGAATTAGACTTGAGCGAAAATCAAATAACTGGTGAAATCCCGTGTTGCTTGGCTAATCTGACACAACTTTCAGAATTATGGTTGTACCAAAATCAAATAACTGGTGAAATCCCGTGTTGCTTGGCTAATCTGACACAACTTTCAGAATTATGGTTGTACCAAAATCAAATAACTGGTGAAATCCCGTGTTGCTTGGCTAATCTGACACAACTTTCAGAATTATGGTTGTACCAAAATCAAATAACTGGTCAAATCCCATCTTGCCTTGGGCAGTTGACCCAATTAACTGTTTTACACGCAGGATTGAACAATCTGCAAGGAACAATTCCCAGGTCGCTATTCGAGCTTAGAAATCTTGAAACTATTTGCCTCCAGTTAAATAACTTGAGTGGGTATGTTGAATTCGATGAGTTTTCCAAGCTCGAAAAGTTGAGCATACTTTCTTTGTCGTATAACAAGTTATCCGTGCAGATCAAAACTGGATCTACTGCTATTCCTCCAAAGCTTCACTATCTAGGATTGGGTTCATGCAACTTAACAGAGTTTCCGGAATTTTTGAAATACACTAGTAAACTGGAGTTTCTGGATCTAGCTGCTAACAATCTTCACGGCCAAATACCAAAATGGATGTGGAATTCAGCTAGCGAAAATTTGTCGTATCTCAACCTCTCTCACAACCACTTAACTGGATTTGAAGAAAATCCGGTCATTATTCCATGGCCTCGGTTAATCTATTTAGAGCTCGGCTCTAACATGCTAAGAGGATCACTGCCAATTCCAGGGCCGTCAATGGAACTCTATTTTGCTTCAAACAATGAATACGCAGGAGAAATTCCAGCAACATTCTGCAACGCGGGGGACCTACATGTTCTTGATTTGTCTAGCAACAACCTGAATGGCATGATTCCCCAATGTTTTGAGAATCTCAGAGCTCTTCAGATATTGAAACTGCAGAACAATTCTTTTCACGGGGATATTCCTCAAATATGTTCAAACAGAAGTACGGAGTTGGCAGCGATTGACATGAGTTATAATCAGCTACAAGGGAAGCTACCAAGATCAATTGCCAATTGTTCTCTGTTGGTGTTTCTTAATTTGGGAAATAATCAGATCAGTGATACCTTCCCATCTTGGTTAGGAACACTTCAACAATTAAAAGTTCTCATTTTGCGGTCCAATGCATTTCATGGCATAATTGGGAAGCCTGCAAGTAGCCATGAGTTTCCTGAGCTGTCCATCATTGATTTATCTAGCAATGATTTTTCAAGTGTTTTGCCCTCCGACTACTTAGAGAACTGGAATGCCATGAAATCTGTTGATGCAAACGAGCAAATATACATCCAAGGCAGGATCACTTACGGGATTTACTATGATTACTATGATTACCCGATTACAGTTTTTAGCAAAGGTCGTGAATTGAAGTATGTCAAGACCCCTTATCTTCTGAGACTCGTAGACTTCTCAAGTAACAGATTTCACGGAGAGATCCCAGGTATCATTGGGAACCTAAGAGGGCTTCATGTGCTTAATCTTTCCAACAACACTCTCACTGGCCTCATCCCCTCTTCTTTGGGGAATTTGAGTGCTCTTGAATCGTTGGATCTCTCCCAAAATCAACTCTCAGGAAAGCTCCCCGGTAATCTGGCGCAACTGACATTCCTTTCATACTTCAATGTATCCCATAATCGTCTCTCGGGGTCCATTCCACAAGGTCGACAATTTGATACACTCCAAGAGGATGTGTACCAAGGAAACTCAGGTTTGTGTGGAAAACCTTTGCCAAAGAAATGTGAAGAATCTGAGAGCACAACACCACAAACATCAAGCTTTGAACAAGAGGAGGACTCTGGATTTCAAATTGAACTAGATTGGTTTGTGGTTCTGCCAGGAGTTGTTGCTGGTCTAATAGTTGGAGTGGTTGGGGGGGACTTTTGGACAACCAAGAAGCATGACTGGTTTGTGGAGACATTCAGCAGGAGTTGGCAGCCAAGAGGCATAAGGCAATGGAGGGACTCAGAACTTAGACTTCATATTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1057

Amino Acids

118.25

Weight (kDa)

5.38

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 90 6.8e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 110 - 251 2.3e-07 Leucine-rich repeat region
LRR_14 PF23598 246 - 328 4.1e-08 Leucine-rich repeat region
LRR_14 PF23598 341 - 453 1.2e-07 Leucine-rich repeat region
LRR_8 PF13855 352 - 411 7e-07 Leucine rich repeat
LRR_4 PF12799 375 - 412 1e-05 Leucine Rich repeats (2 copies)
LRR_14 PF23598 437 - 627 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 658 - 699 5.2e-07 Leucine rich repeat
LRR_14 PF23598 848 - 938 2.9e-06 Leucine-rich repeat region
LRR_8 PF13855 882 - 942 2e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2166
Acc36I ACCTGC 1 cut(s) 871
AccI GTMKAC 2 cut(s) 2589, 2848
AccII CGCG 1 cut(s) 1988
AccIII TCCGGA 1 cut(s) 1681
AciI CCGC 5 cut(s) 66, 769, 835, 1988, 2305
AclWI GGATC 9 cut(s) 13, 170, 218, 1624, 1728, 1906, 2492, 2614, 2742
AcoI YGGCCR 4 cut(s) 280, 478, 1012, 1744
AcuI CTGAAG 4 cut(s) 379, 813, 1142, 2054
AfaI GTAC 8 cut(s) 87, 750, 902, 1220, 1292, 1364, 2137, 2879
AfiI CCNNNNNNNGG 3 cut(s) 210, 1035, 1913
AflII CTTAAG 1 cut(s) 1087
AflIII ACRYGT 1 cut(s) 1999
AgeI ACCGGT 1 cut(s) 779
AhlI ACTAGT 1 cut(s) 1700
AjnI CCWGG 9 cut(s) 11, 203, 416, 576, 996, 1463, 1912, 2623, 3019
AloI GAACNNNNNNTCC 2 cut(s) 564, 596
Alw21I GWGCWC 4 cut(s) 1878, 2068, 2722, 2942
Alw26I GTCTC 5 cut(s) 552, 870, 2575, 2828, 3092
AlwI GGATC 9 cut(s) 13, 170, 218, 1624, 1728, 1906, 2492, 2614, 2742
Ama87I CYCGRG 1 cut(s) 2827
Aor13HI TCCGGA 1 cut(s) 1681
ApeKI GCWGC 4 cut(s) 309, 1727, 2147, 3118
ArsI GACNNNNNNTTYG 2 cut(s) 1366, 1398
AseI ATTAAT 1 cut(s) 60
AsiGI ACCGGT 1 cut(s) 779
AspLEI GCGC 1 cut(s) 2782
AspS9I GGNCC 4 cut(s) 1916, 1993, 2307, 2832
AsuC2I CCSGG 1 cut(s) 2769
AsuHPI GGTGA 4 cut(s) 667, 1178, 1250, 1322
AsuNHI GCTAGC 1 cut(s) 1775
AvaI CYCGRG 1 cut(s) 2827
AvaII GGWCC 3 cut(s) 1993, 2307, 2832
BalI TGGCCA 3 cut(s) 282, 480, 1014
BanII GRGCYC 2 cut(s) 1878, 2068
BbsI GAAGAC 3 cut(s) 459, 525, 677
Bbv12I GWGCWC 4 cut(s) 1878, 2068, 2722, 2942
BbvI GCAGC 4 cut(s) 321, 1714, 2159, 3130
BccI CCATC 8 cut(s) 248, 335, 421, 496, 943, 1399, 2269, 2378
BceAI ACGGC 2 cut(s) 1759, 1903
BciT130I CCWGG 9 cut(s) 13, 205, 418, 578, 998, 1465, 1914, 2625, 3021
BciVI GTATCC 2 cut(s) 902, 2821
BcnI CCSGG 1 cut(s) 2769
BcoDI GTCTC 5 cut(s) 552, 870, 2575, 2828, 3092
BcuI ACTAGT 1 cut(s) 1700
BfaI CTAG 9 cut(s) 144, 537, 1649, 1701, 1724, 1776, 2016, 2385, 2999
BfmI CTRYAG 2 cut(s) 153, 2084
BfrI CTTAAG 1 cut(s) 1087
BfuAI ACCTGC 1 cut(s) 871
BfuI GTATCC 2 cut(s) 902, 2821
BisI GCNGC 4 cut(s) 310, 1728, 2148, 3119
BlsI GCNGC 4 cut(s) 311, 1729, 2149, 3120
BmcAI AGTACT 1 cut(s) 750
Bme18I GGWCC 3 cut(s) 1993, 2307, 2832
BmeT110I CYCGRG 1 cut(s) 2827
BmgT120I GGNCC 4 cut(s) 1916, 1993, 2307, 2832
BmiI GGNNCC 5 cut(s) 325, 634, 1994, 2639, 2833
BmrI ACTGGG 1 cut(s) 710
BmsI GCATC 2 cut(s) 209, 2443
BmtI GCTAGC 1 cut(s) 1779
BmuI ACTGGG 1 cut(s) 710
BpiI GAAGAC 3 cut(s) 459, 525, 677
BplI GAGNNNNNCTC 6 cut(s) 617, 649, 1865, 1897, 2963, 2995
BpmI CTGGAG 2 cut(s) 1490, 1730
Bpu10I CCTNAGC 1 cut(s) 2361
BpuEI CTTGAG 3 cut(s) 1165, 1540, 2581
BpuMI CCSGG 1 cut(s) 2769
BsaI GGTCTC 1 cut(s) 870
BsaWI WCCGGW 3 cut(s) 779, 1681, 1837
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 3 cut(s) 210, 1035, 1913
Bse118I RCCGGY 1 cut(s) 779
Bse3DI GCAATG 2 cut(s) 2395, 3143
BseAI TCCGGA 1 cut(s) 1681
BseBI CCWGG 9 cut(s) 13, 205, 418, 578, 998, 1465, 1914, 2625, 3021
BseGI GGATG 8 cut(s) 8, 200, 259, 413, 1767, 2472, 2691, 2878
BseLI CCNNNNNNNGG 3 cut(s) 210, 1035, 1913
BseMI GCAATG 2 cut(s) 2395, 3143
BseMII CTCAG 7 cut(s) 2074, 2352, 2570, 2769, 2904, 2925, 3162
BseRI GAGGAG 1 cut(s) 2987
BseXI GCAGC 4 cut(s) 321, 1714, 2159, 3130
BseYI CCCAGC 1 cut(s) 957
BsgI GTGCAG 1 cut(s) 1622
Bsh1236I CGCG 1 cut(s) 1988
BshTI ACCGGT 1 cut(s) 779
BsiHKAI GWGCWC 4 cut(s) 1878, 2068, 2722, 2942
BsiHKCI CYCGRG 1 cut(s) 2827
BsiSI CCGG 4 cut(s) 780, 1682, 1838, 2769
BslFI GGGAC 4 cut(s) 798, 2006, 3074, 3158
BslI CCNNNNNNNGG 3 cut(s) 210, 1035, 1913
BsmAI GTCTC 5 cut(s) 552, 870, 2575, 2828, 3092
BsmBI CGTCTC 1 cut(s) 2828
BsmFI GGGAC 4 cut(s) 798, 2006, 3074, 3158
BsmI GAATGC 2 cut(s) 269, 2440
Bso31I GGTCTC 1 cut(s) 870
BsoBI CYCGRG 1 cut(s) 2827
Bsp1286I GDGCHC 4 cut(s) 1878, 2068, 2722, 2942
Bsp13I TCCGGA 1 cut(s) 1681
Bsp1407I TGTACA 1 cut(s) 900
Bsp19I CCATGG 1 cut(s) 1850
BspACI CCGC 5 cut(s) 66, 769, 835, 1988, 2305
BspCNI CTCAG 7 cut(s) 2073, 2353, 2571, 2768, 2903, 2926, 3161
BspEI TCCGGA 1 cut(s) 1681
BspFNI CGCG 1 cut(s) 1988
BspLI GGNNCC 5 cut(s) 325, 634, 1994, 2639, 2833
BspMAI CTGCAG 1 cut(s) 2088
BspMI ACCTGC 1 cut(s) 871
BspOI GCTAGC 1 cut(s) 1779
BspPI GGATC 9 cut(s) 13, 170, 218, 1624, 1728, 1906, 2492, 2614, 2742
BspQI GCTCTTC 2 cut(s) 789, 2073
BspTI CTTAAG 1 cut(s) 1087
BspTNI GGTCTC 1 cut(s) 870
BsrDI GCAATG 2 cut(s) 2395, 3143
BsrFI RCCGGY 1 cut(s) 779
BsrGI TGTACA 1 cut(s) 900
BssAI RCCGGY 1 cut(s) 779
BssT1I CCWWGG 5 cut(s) 1072, 1399, 1850, 2476, 2881
Bst2UI CCWGG 9 cut(s) 13, 205, 418, 578, 998, 1465, 1914, 2625, 3021
Bst4CI ACNGT 5 cut(s) 242, 640, 914, 1423, 2530
Bst6I CTCTTC 3 cut(s) 789, 2073, 2704
BstAFI CTTAAG 1 cut(s) 1087
BstAUI TGTACA 1 cut(s) 900
BstC8I GCNNGC 4 cut(s) 70, 307, 1777, 2340
BstDSI CCRYGG 1 cut(s) 1850
BstENI CCTNNNNNAGG 1 cut(s) 208
BstF5I GGATG 8 cut(s) 8, 200, 259, 413, 1767, 2472, 2691, 2878
BstFNI CGCG 1 cut(s) 1988
BstHHI GCGC 1 cut(s) 2782
BstMAI GTCTC 5 cut(s) 552, 870, 2575, 2828, 3092
BstMWI GCNNNNNNNGC 2 cut(s) 1477, 2656
BstNI CCWGG 9 cut(s) 13, 205, 418, 578, 998, 1465, 1914, 2625, 3021
BstNSI RCATGY 3 cut(s) 72, 1891, 2003
BstSFI CTRYAG 2 cut(s) 153, 2084
BstUI CGCG 1 cut(s) 1988
BstV1I GCAGC 4 cut(s) 321, 1714, 2159, 3130
BstV2I GAAGAC 3 cut(s) 459, 525, 677
BstX2I RGATCY 6 cut(s) 175, 223, 1616, 1720, 2619, 2734
BstXI CCANNNNNNTGG 3 cut(s) 278, 290, 1820
BstYI RGATCY 6 cut(s) 175, 223, 1616, 1720, 2619, 2734
BsuI GTATCC 2 cut(s) 902, 2821
BtgI CCRYGG 1 cut(s) 1850
BtsCI GGATG 8 cut(s) 8, 200, 259, 413, 1767, 2472, 2691, 2878
BtsI GCAGTG 1 cut(s) 1901
BtsIMutI CAGTG 5 cut(s) 645, 1015, 1901, 2254, 2682
BveI ACCTGC 1 cut(s) 871
Cac8I GCNNGC 4 cut(s) 70, 307, 1777, 2340
CfoI GCGC 1 cut(s) 2782
Cfr10I RCCGGY 1 cut(s) 779
Cfr13I GGNCC 4 cut(s) 1916, 1993, 2307, 2832
Csp6I GTAC 8 cut(s) 86, 749, 901, 1219, 1291, 1363, 2136, 2878
CspAI ACCGGT 1 cut(s) 779
CviQI GTAC 8 cut(s) 86, 749, 901, 1219, 1291, 1363, 2136, 2878
EaeI YGGCCR 4 cut(s) 280, 478, 1012, 1744
Eam1104I CTCTTC 3 cut(s) 789, 2073, 2704
EarI CTCTTC 3 cut(s) 789, 2073, 2704
Ecl136II GAGCTC 2 cut(s) 1876, 2066
Eco130I CCWWGG 5 cut(s) 1072, 1399, 1850, 2476, 2881
Eco24I GRGCYC 2 cut(s) 1878, 2068
Eco31I GGTCTC 1 cut(s) 870
Eco47I GGWCC 3 cut(s) 1993, 2307, 2832
Eco53kI GAGCTC 2 cut(s) 1876, 2066
Eco57I CTGAAG 4 cut(s) 379, 813, 1142, 2054
Eco88I CYCGRG 1 cut(s) 2827
EcoICRI GAGCTC 2 cut(s) 1876, 2066
EcoNI CCTNNNNNAGG 1 cut(s) 208
EcoO109I RGGNCCY 1 cut(s) 1993
EcoRI GAATTC 2 cut(s) 1535, 1768
EcoRII CCWGG 9 cut(s) 11, 203, 416, 576, 996, 1463, 1912, 2623, 3019
EcoT14I CCWWGG 5 cut(s) 1072, 1399, 1850, 2476, 2881
EcoT22I ATGCAT 1 cut(s) 2317
EcoT38I GRGCYC 2 cut(s) 1878, 2068
ErhI CCWWGG 5 cut(s) 1072, 1399, 1850, 2476, 2881
Esp3I CGTCTC 1 cut(s) 2828
FaqI GGGAC 4 cut(s) 798, 2006, 3074, 3158
FauI CCCGC 1 cut(s) 1981
FblI GTMKAC 2 cut(s) 2589, 2848
Fnu4HI GCNGC 4 cut(s) 310, 1728, 2148, 3119
FokI GGATG 7 cut(s) 187, 266, 400, 1774, 2459, 2678, 2885
FriOI GRGCYC 2 cut(s) 1878, 2068
Fsp4HI GCNGC 4 cut(s) 310, 1728, 2148, 3119
FspBI CTAG 9 cut(s) 144, 537, 1649, 1701, 1724, 1776, 2016, 2385, 2999
GlaI GCGC 1 cut(s) 2781
GluI GCNGC 4 cut(s) 310, 1728, 2148, 3119
GsaI CCCAGC 1 cut(s) 961
GsuI CTGGAG 2 cut(s) 1490, 1730
HapII CCGG 4 cut(s) 780, 1682, 1838, 2769
HhaI GCGC 1 cut(s) 2782
Hin6I GCGC 1 cut(s) 2780
HinP1I GCGC 1 cut(s) 2780
HincII GTYRAC 3 cut(s) 840, 1410, 2849
HindII GTYRAC 3 cut(s) 840, 1410, 2849
HindIII AAGCTT 2 cut(s) 1637, 2959
HpaII CCGG 4 cut(s) 780, 1682, 1838, 2769
HphI GGTGA 4 cut(s) 667, 1178, 1250, 1322
Hpy166II GTNNAC 6 cut(s) 840, 1410, 1706, 2590, 2849, 2878
Hpy8I GTNNAC 6 cut(s) 840, 1410, 1706, 2590, 2849, 2878
HpyAV CCTTC 4 cut(s) 212, 698, 890, 2266
HpyCH4III ACNGT 5 cut(s) 242, 640, 914, 1423, 2530
HpyCH4IV ACGT 1 cut(s) 650
HpyF10VI GCNNNNNNNGC 2 cut(s) 1477, 2656
HpySE526I ACGT 1 cut(s) 650
HspAI GCGC 1 cut(s) 2780
Kpn2I TCCGGA 1 cut(s) 1681
LguI GCTCTTC 2 cut(s) 789, 2073
LmnI GCTCC 2 cut(s) 638, 2769
Lsp1109I GCAGC 4 cut(s) 321, 1714, 2159, 3130
LweI GCATC 2 cut(s) 209, 2443
MaeI CTAG 9 cut(s) 144, 537, 1649, 1701, 1724, 1776, 2016, 2385, 2999
MaeII ACGT 1 cut(s) 650
MaeIII GTNAC 6 cut(s) 236, 695, 782, 914, 1018, 2600
MfeI CAATTG 2 cut(s) 2196, 2203
MflI RGATCY 6 cut(s) 175, 223, 1616, 1720, 2619, 2734
MhlI GDGCHC 4 cut(s) 1878, 2068, 2722, 2942
MlsI TGGCCA 3 cut(s) 282, 480, 1014
MluNI TGGCCA 3 cut(s) 282, 480, 1014
MlyI GAGTC 4 cut(s) 554, 2577, 2972, 3140
MmeI TCCRAC 7 cut(s) 588, 972, 1021, 2439, 2694, 2712, 3025
Mox20I TGGCCA 3 cut(s) 282, 480, 1014
Mph1103I ATGCAT 1 cut(s) 2317
MroI TCCGGA 1 cut(s) 1681
MscI TGGCCA 3 cut(s) 282, 480, 1014
MslI CAYNNNNRTG 2 cut(s) 13, 111
Msp20I TGGCCA 3 cut(s) 282, 480, 1014
MspCI CTTAAG 1 cut(s) 1087
MspI CCGG 4 cut(s) 780, 1682, 1838, 2769
MunI CAATTG 2 cut(s) 2196, 2203
Mva1269I GAATGC 2 cut(s) 269, 2440
MvaI CCWGG 9 cut(s) 13, 205, 418, 578, 998, 1465, 1914, 2625, 3021
MvnI CGCG 1 cut(s) 1988
MwoI GCNNNNNNNGC 2 cut(s) 1477, 2656
NciI CCSGG 1 cut(s) 2769
NcoI CCATGG 1 cut(s) 1850
NheI GCTAGC 1 cut(s) 1775
NlaIV GGNNCC 5 cut(s) 325, 634, 1994, 2639, 2833
NmeAIII GCCGAG 1 cut(s) 1857
NsiI ATGCAT 1 cut(s) 2317
NspI RCATGY 3 cut(s) 72, 1891, 2003
PaeI GCATGC 1 cut(s) 72
PciI ACATGT 1 cut(s) 1999
PciSI GCTCTTC 2 cut(s) 789, 2073
PctI GAATGC 2 cut(s) 269, 2440
PfeI GAWTC 6 cut(s) 1025, 1117, 2038, 2056, 2726, 2930
PinAI ACCGGT 1 cut(s) 779
PkrI GCNGC 4 cut(s) 311, 1729, 2149, 3120
PleI GAGTC 4 cut(s) 553, 2577, 2972, 3140
PpsI GAGTC 4 cut(s) 553, 2577, 2972, 3140
PpuMI RGGWCCY 1 cut(s) 1993
PscI ACATGT 1 cut(s) 1999
PshBI ATTAAT 1 cut(s) 60
PsiI TTATAA 1 cut(s) 2166
Psp124BI GAGCTC 2 cut(s) 1878, 2068
Psp5II RGGWCCY 1 cut(s) 1993
Psp6I CCWGG 9 cut(s) 11, 203, 416, 576, 996, 1463, 1912, 2623, 3019
PspFI CCCAGC 1 cut(s) 957
PspGI CCWGG 9 cut(s) 11, 203, 416, 576, 996, 1463, 1912, 2623, 3019
PspN4I GGNNCC 5 cut(s) 325, 634, 1994, 2639, 2833
PspPI GGNCC 4 cut(s) 1916, 1993, 2307, 2832
PspPPI RGGWCCY 1 cut(s) 1993
PsrI GAACNNNNNNTAC 2 cut(s) 229, 261
PstI CTGCAG 1 cut(s) 2088
PsuI RGATCY 6 cut(s) 175, 223, 1616, 1720, 2619, 2734
RsaI GTAC 8 cut(s) 87, 750, 902, 1220, 1292, 1364, 2137, 2879
RsaNI GTAC 8 cut(s) 86, 749, 901, 1219, 1291, 1363, 2136, 2878
RseI CAYNNNNRTG 2 cut(s) 13, 111
SacI GAGCTC 2 cut(s) 1878, 2068
SalI GTCGAC 1 cut(s) 2847
SapI GCTCTTC 2 cut(s) 789, 2073
SatI GCNGC 4 cut(s) 310, 1728, 2148, 3119
Sau96I GGNCC 4 cut(s) 1916, 1993, 2307, 2832
ScaI AGTACT 1 cut(s) 750
SchI GAGTC 4 cut(s) 554, 2577, 2972, 3140
SduI GDGCHC 4 cut(s) 1878, 2068, 2722, 2942
SfaNI GCATC 2 cut(s) 209, 2443
SfcI CTRYAG 2 cut(s) 153, 2084
SinI GGWCC 3 cut(s) 1993, 2307, 2832
SmiMI CAYNNNNRTG 2 cut(s) 13, 111
SmlI CTYRAG 4 cut(s) 1087, 1144, 1519, 2596
SmoI CTYRAG 4 cut(s) 1087, 1144, 1519, 2596
SpeI ACTAGT 1 cut(s) 1700
SphI GCATGC 1 cut(s) 72
SsiI CCGC 5 cut(s) 66, 769, 835, 1988, 2305
SspMI CTAG 9 cut(s) 144, 537, 1649, 1701, 1724, 1776, 2016, 2385, 2999
SstI GAGCTC 2 cut(s) 1878, 2068
StyI CCWWGG 5 cut(s) 1072, 1399, 1850, 2476, 2881
TaaI ACNGT 5 cut(s) 242, 640, 914, 1423, 2530
TaiI ACGT 1 cut(s) 653
TaqI TCGA 5 cut(s) 261, 1476, 1539, 1557, 2848
TatI WGTACW 2 cut(s) 748, 900
TfiI GAWTC 6 cut(s) 1025, 1117, 2038, 2056, 2726, 2930
TscAI CASTG 5 cut(s) 645, 1015, 1908, 2254, 2689
TseI GCWGC 4 cut(s) 309, 1727, 2147, 3118
TspGWI ACGGA 5 cut(s) 23, 671, 1588, 2153, 2628
TspRI CASTG 5 cut(s) 645, 1015, 1908, 2254, 2689
Vha464I CTTAAG 1 cut(s) 1087
VpaK11BI GGWCC 3 cut(s) 1993, 2307, 2832
VspI ATTAAT 1 cut(s) 60
XagI CCTNNNNNAGG 1 cut(s) 208
XceI RCATGY 3 cut(s) 72, 1891, 2003
XcmI CCANNNNNNNNNTGG 1 cut(s) 1761
XmiI GTMKAC 2 cut(s) 2589, 2848
XspI CTAG 9 cut(s) 144, 537, 1649, 1701, 1724, 1776, 2016, 2385, 2999
ZrmI AGTACT 1 cut(s) 750
Zsp2I ATGCAT 1 cut(s) 2317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.