AT4G13880

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
8025804 .. 8028614
2811 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G13880.1

Sequence Viewer

Length: 2178 bp
ATGCATTCTTGTAGTGAGAGGAGGATGATGACAGTAATATGGAGCTTGTGTTTAATCTTCTGCCTCTCTAACTCAATACTTGCCATTGCTAAAGACTTGTGTCTTCCCGACCAGAGGGATGCTCTTTTAGAGTTCAAAAACGAGTTCTACGTCCAAGAGTTCGATCCCCATATGAAGTGTGAAAAGGCAACAGAGACGTGGAGGAACAAGACTGATTGCTGTTCTTGGAATCGTGTCTCTTGTGATCCTAAGACAGGCAAGGTCGTCGAGTTAGATCTCATGAGCAGTTGTCTCAATGGCCCTTTGAGATCTAATAGTAGCCTGTTTAGACTACAACATCTCCAGAGCTTAGAACTTAGCTCCAATAATATTTCCGGTATCCTACCAGATTCCATCGGCAACCTCAAATATTTGAGGTCTTTAAGTTTTCGTACTTGCCATCTCTTTGGAAAGATTCCATCTTCACTCGGAAGTCTTTCTTATCTCACTCATCTTGATCTTTCTTATAACGATTTCACCAGTGAAGGACCAGATTCGGGTGGCAACCTAAACCGACTTACAGATTTGCAACTTGTGCTACTCAACTTGAGCTCGGTCACCTGGATCGACCTTGGTTCTAACCAGTTGAAAGGAAGGGGCATTGTTGATTTCAGCATCTTCTTGCATCTCAAGTCACTTTGTTCACTTGACCTCTCCTATCTGAATACAAGAAGCATGGTTGATTTGAGTTTTTTTTCACATCTCATGTCACTTGATGAGCTGGATCTTTCAGGGATTAATTTGAAGATCAGTTCAACTCTCAGCTTTCCCTCAGCCACGGGCACCTTGATTTTAGCATCCTGCAATATTGTTGAGTTCCCCAAGTTTCTAGAAAACCAAACCAGTTTGTTTTATCTAGACATCTCTGCAAATCACATTGAAGGCCAAGTACCGGAGTGGTTGTGGAGACTGCCAACGTTGTCGTTTGTAAACATTGCTCAGAATTCCTTCAGTGGAGAACTACCTATGTTACCAAACTCTATCTATAGCTTTATAGCCTCTGATAATCAGTTTTCGGGAGAGATTCCTAGAACAGTATGCGAATTGGTTAGTCTTAATACACTTGTTTTATCTAACAACAAATTCAGCGGTTCTATTCCCCGGTGTTTTGAGAATTTCAAAACTATTTCAATCTTGCATCTTCGGAATAACAGCCTCTCGGGTGTTTTTCCAAAGGAAATTATCAGTGAAACCTTGACATCACTTGATGTTGGTCACAATTGGCTATCAGGACAACTTCCCAAGTCTCTGATCAAATGCACTGACCTCGAGTTTCTGAACGTGGAAGATAACAGAATCAATGACAAATTTCCATTTTGGTTGAGATCGTTGTCCAATCTACAGATTCTTGTCCTTCGTTCTAATGAGTTCTATGGGCCAATATTTTCTCTTGAAGATTCTTTGAGTTTCCCCAAGTTGCGAATCTTTGATATTTCGGAAAATCACTTCACTGGAGTCTTGCCATCAGATTACTTTGCAGGTTGGAGTGCAATGTCATCAGTCGTAGACATTTTTGATACTACGCCTCAGGTTCACATTTTAGGAGTTTTCCAGGGATACTATCATAACTCTGTGGTTCTGACGAACAAAGGATTAAATATGGAGCTGGTTGGGAGTGGTTTCACAATCTACAAAACCATTGATGTCTCCGGAAACAGACTCGAAGGAGATATTCCAGAATCGATTGGTATACTCAAGGAACTGATTGTGCTCAACATGTCAAACAACGCTTTCACAGGCCATATTCCACCATCTCTATCAAACTTGAGCAATCTCCAATCATTGGATCTATCTCAAAACAGATTATCCGGCAGTATCCCGCCAGAGCTCGGGAAACTTACGTTTCTGGAGTGGATGAACTTCTCGTACAACAGGCTTGAAGGTCCAATACCACAAGCCACTCAGATTCAAAGCCAGAATAGTTCTTCTTTCGCAGAGAATCCCGGGCTTTGCGGTGCTCCTTTCCTAAACAAATGTGGTGGAGAAGAAGAAGAAGAAGAAGAAGCAACAAAGCAAGAAGAAGATGAAGATGAAGAAAAGGAAGAGAAAAATCAAGTATTTAGCTGGATAGCAGCTGCAATAGGATATGTACCTGGTGTGTTCTGTGGACTCACCATCGCCCACATTCTCACTTCATAG

Protein Analysis

725

Amino Acids

80.97

Weight (kDa)

4.91

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 82 6.9e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 95 - 332 2e-11 Leucine-rich repeat region
LRR_8 PF13855 558 - 615 1.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 507
Acc36I ACCTGC 1 cut(s) 1508
AccB1I GGYRCC 1 cut(s) 821
AccB7I CCANNNNNTGG 1 cut(s) 1822
AccI GTMKAC 2 cut(s) 1545, 1729
AccIII TCCGGA 1 cut(s) 1688
AciI CCGC 3 cut(s) 1128, 1859, 1992
AclI AACGTT 1 cut(s) 956
AclWI GGATC 5 cut(s) 158, 239, 611, 771, 1833
AcsI RAATTY 4 cut(s) 982, 1121, 1153, 1346
AcuI CTGAAG 1 cut(s) 973
AfaI GTAC 4 cut(s) 433, 930, 1907, 2130
AfiI CCNNNNNNNGG 6 cut(s) 114, 254, 536, 931, 1822, 1868
AflIII ACRYGT 1 cut(s) 1755
AjiI CACGTC 1 cut(s) 198
AjnI CCWGG 3 cut(s) 599, 1590, 2131
Alw21I GWGCWC 4 cut(s) 593, 1752, 1869, 1999
Alw26I GTCTC 6 cut(s) 188, 241, 296, 940, 1290, 1690
AlwI GGATC 5 cut(s) 158, 239, 611, 771, 1833
Ama87I CYCGRG 4 cut(s) 1198, 1307, 1868, 1982
Aor13HI TCCGGA 1 cut(s) 1688
AoxI GGCC 4 cut(s) 298, 922, 1415, 1777
ApeKI GCWGC 2 cut(s) 2111, 2114
ApoI RAATTY 4 cut(s) 982, 1121, 1153, 1346
AseI ATTAAT 1 cut(s) 777
Asp700I GAANNNNTTC 2 cut(s) 475, 986
AspS9I GGNCC 4 cut(s) 299, 527, 1415, 1922
AsuC2I CCSGG 3 cut(s) 1141, 1983, 1984
AsuHPI GGTGA 3 cut(s) 508, 589, 2143
AvaI CYCGRG 4 cut(s) 1198, 1307, 1868, 1982
AvaII GGWCC 2 cut(s) 527, 1922
AxyI CCTNAGG 1 cut(s) 1566
BaeGI GKGCMC 1 cut(s) 824
BanI GGYRCC 1 cut(s) 821
BanII GRGCYC 2 cut(s) 593, 1869
BarI GAAGNNNNNNTAC 4 cut(s) 912, 944, 1911, 1943
BbsI GAAGAC 1 cut(s) 95
Bbv12I GWGCWC 4 cut(s) 593, 1752, 1869, 1999
BbvCI CCTCAGC 1 cut(s) 811
BbvI GCAGC 2 cut(s) 2101, 2123
BccI CCATC 6 cut(s) 401, 447, 466, 1510, 1798, 2162
BcgI CGANNNNNNTGC 4 cut(s) 247, 281, 1288, 1322
BciT130I CCWGG 3 cut(s) 601, 1592, 2133
BciVI GTATCC 3 cut(s) 389, 1589, 1865
BclI TGATCA 1 cut(s) 1290
BcnI CCSGG 3 cut(s) 1141, 1983, 1984
BcoDI GTCTC 6 cut(s) 188, 241, 296, 940, 1290, 1690
BfaI CTAG 3 cut(s) 869, 896, 1068
BfmI CTRYAG 2 cut(s) 1024, 1379
BfuAI ACCTGC 1 cut(s) 1508
BfuI GTATCC 3 cut(s) 389, 1589, 1865
BglII AGATCT 2 cut(s) 274, 308
BisI GCNGC 2 cut(s) 2112, 2115
BlsI GCNGC 2 cut(s) 2113, 2116
Bme1390I CCNGG 6 cut(s) 601, 1141, 1592, 1983, 1984, 2133
Bme18I GGWCC 2 cut(s) 527, 1922
BmeT110I CYCGRG 4 cut(s) 1198, 1307, 1868, 1982
BmgBI CACGTC 1 cut(s) 198
BmgT120I GGNCC 4 cut(s) 299, 527, 1415, 1922
BmiI GGNNCC 1 cut(s) 823
BmrFI CCNGG 6 cut(s) 601, 1141, 1592, 1983, 1984, 2133
BmsI GCATC 5 cut(s) 109, 663, 673, 845, 1186
BoxI GACNNNNGTC 1 cut(s) 99
BpiI GAAGAC 1 cut(s) 95
BplI GAGNNNNNCTC 2 cut(s) 106, 138
BpmI CTGGAG 3 cut(s) 326, 1512, 1907
Bpu10I CCTNAGC 1 cut(s) 811
BpuEI CTTGAG 4 cut(s) 607, 653, 1718, 1825
BpuMI CCSGG 3 cut(s) 1141, 1983, 1984
Bsa29I ATCGAT 1 cut(s) 1721
BsaJI CCNNGG 5 cut(s) 610, 816, 1139, 1591, 1982
BsaWI WCCGGW 3 cut(s) 374, 931, 1688
BsaXI ACNNNNNCTCC 6 cut(s) 34, 64, 324, 354, 926, 956
Bsc4I CCNNNNNNNGG 6 cut(s) 114, 254, 536, 931, 1822, 1868
Bse1I ACTGG 4 cut(s) 519, 622, 882, 1495
Bse21I CCTNAGG 1 cut(s) 1566
Bse3DI GCAATG 3 cut(s) 84, 972, 1536
BseAI TCCGGA 1 cut(s) 1688
BseBI CCWGG 3 cut(s) 601, 1592, 2133
BseCI ATCGAT 1 cut(s) 1721
BseDI CCNNGG 5 cut(s) 610, 816, 1139, 1591, 1982
BseGI GGATG 4 cut(s) 30, 124, 836, 1899
BseLI CCNNNNNNNGG 6 cut(s) 114, 254, 536, 931, 1822, 1868
BseMI GCAATG 3 cut(s) 84, 972, 1536
BseMII CTCAG 5 cut(s) 814, 825, 992, 1580, 1955
BseNI ACTGG 4 cut(s) 519, 622, 882, 1495
BseRI GAGGAG 1 cut(s) 34
BseSI GKGCMC 1 cut(s) 824
BseXI GCAGC 2 cut(s) 2101, 2123
BshFI GGCC 4 cut(s) 300, 924, 1417, 1779
BshNI GGYRCC 1 cut(s) 821
BshVI ATCGAT 1 cut(s) 1721
BsiHKAI GWGCWC 4 cut(s) 593, 1752, 1869, 1999
BsiHKCI CYCGRG 4 cut(s) 1198, 1307, 1868, 1982
BsiSI CCGG 6 cut(s) 375, 932, 1141, 1689, 1848, 1983
BslI CCNNNNNNNGG 6 cut(s) 114, 254, 536, 931, 1822, 1868
BsmAI GTCTC 6 cut(s) 188, 241, 296, 940, 1290, 1690
BsmBI CGTCTC 1 cut(s) 188
BsmI GAATGC 1 cut(s) 4
BsnI GGCC 4 cut(s) 300, 924, 1417, 1779
BsoBI CYCGRG 4 cut(s) 1198, 1307, 1868, 1982
Bsp1286I GDGCHC 5 cut(s) 593, 824, 1752, 1869, 1999
Bsp13I TCCGGA 1 cut(s) 1688
BspACI CCGC 3 cut(s) 1128, 1859, 1992
BspANI GGCC 4 cut(s) 300, 924, 1417, 1779
BspCNI CTCAG 5 cut(s) 813, 824, 991, 1579, 1954
BspDI ATCGAT 1 cut(s) 1721
BspEI TCCGGA 1 cut(s) 1688
BspHI TCATGA 1 cut(s) 279
BspLI GGNNCC 1 cut(s) 823
BspMI ACCTGC 1 cut(s) 1508
BspPI GGATC 5 cut(s) 158, 239, 611, 771, 1833
BspT107I GGYRCC 1 cut(s) 821
BsrDI GCAATG 3 cut(s) 84, 972, 1536
BsrI ACTGG 4 cut(s) 519, 622, 882, 1495
BssECI CCNNGG 5 cut(s) 610, 816, 1139, 1591, 1982
BssNAI GTATAC 1 cut(s) 1730
BssT1I CCWWGG 1 cut(s) 610
Bst1107I GTATAC 1 cut(s) 1730
Bst2UI CCWGG 3 cut(s) 601, 1592, 2133
Bst4CI ACNGT 2 cut(s) 34, 1075
Bst6I CTCTTC 1 cut(s) 2076
BstAPI GCANNNNNTGC 1 cut(s) 574
BstDEI CTNAG 8 cut(s) 249, 349, 356, 800, 811, 978, 1566, 1941
BstDSI CCRYGG 1 cut(s) 816
BstEII GGTNACC 1 cut(s) 595
BstENI CCTNNNNNAGG 1 cut(s) 252
BstF5I GGATG 4 cut(s) 30, 124, 836, 1899
BstMAI GTCTC 6 cut(s) 188, 241, 296, 940, 1290, 1690
BstMWI GCNNNNNNNGC 1 cut(s) 574
BstNI CCWGG 3 cut(s) 601, 1592, 2133
BstNSI RCATGY 1 cut(s) 1759
BstPAI GACNNNNGTC 1 cut(s) 99
BstPI GGTNACC 1 cut(s) 595
BstSCI CCNGG 6 cut(s) 599, 1139, 1590, 1981, 1982, 2131
BstSFI CTRYAG 2 cut(s) 1024, 1379
BstSLI GKGCMC 1 cut(s) 824
BstV1I GCAGC 2 cut(s) 2101, 2123
BstV2I GAAGAC 1 cut(s) 95
BstX2I RGATCY 4 cut(s) 274, 308, 763, 1825
BstXI CCANNNNNNTGG 1 cut(s) 446
BstYI RGATCY 4 cut(s) 274, 308, 763, 1825
BstZ17I GTATAC 1 cut(s) 1730
Bsu15I ATCGAT 1 cut(s) 1721
Bsu36I CCTNAGG 1 cut(s) 1566
BsuI GTATCC 3 cut(s) 389, 1589, 1865
BsuRI GGCC 4 cut(s) 300, 924, 1417, 1779
BsuTUI ATCGAT 1 cut(s) 1721
BtgI CCRYGG 1 cut(s) 816
BtgZI GCGATG 1 cut(s) 2140
BtrI CACGTC 1 cut(s) 198
BtsCI GGATG 4 cut(s) 30, 124, 836, 1899
BtsIMutI CAGTG 5 cut(s) 526, 997, 1231, 1299, 1488
BveI ACCTGC 1 cut(s) 1508
CciI TCATGA 1 cut(s) 279
Cfr13I GGNCC 4 cut(s) 299, 527, 1415, 1922
Cfr9I CCCGGG 1 cut(s) 1982
ClaI ATCGAT 1 cut(s) 1721
CsiI ACCWGGT 1 cut(s) 2131
Csp6I GTAC 4 cut(s) 432, 929, 1906, 2129
CspCI CAANNNNNGTGG 2 cut(s) 1999, 2034
CviAII CATG 4 cut(s) 280, 715, 745, 1756
CviQI GTAC 4 cut(s) 432, 929, 1906, 2129
DdeI CTNAG 8 cut(s) 249, 349, 356, 800, 811, 978, 1566, 1941
Eam1104I CTCTTC 1 cut(s) 2076
EarI CTCTTC 1 cut(s) 2076
Ecl136II GAGCTC 2 cut(s) 591, 1867
Eco130I CCWWGG 1 cut(s) 610
Eco24I GRGCYC 2 cut(s) 593, 1869
Eco47I GGWCC 2 cut(s) 527, 1922
Eco53kI GAGCTC 2 cut(s) 591, 1867
Eco57I CTGAAG 1 cut(s) 973
Eco81I CCTNAGG 1 cut(s) 1566
Eco88I CYCGRG 4 cut(s) 1198, 1307, 1868, 1982
Eco91I GGTNACC 1 cut(s) 595
EcoICRI GAGCTC 2 cut(s) 591, 1867
EcoNI CCTNNNNNAGG 1 cut(s) 252
EcoO65I GGTNACC 1 cut(s) 595
EcoRI GAATTC 1 cut(s) 982
EcoRII CCWGG 3 cut(s) 599, 1590, 2131
EcoT14I CCWWGG 1 cut(s) 610
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 593, 1869
ErhI CCWWGG 1 cut(s) 610
Esp3I CGTCTC 1 cut(s) 188
FaeI CATG 4 cut(s) 283, 718, 748, 1759
FalI AAGNNNNNCTT 2 cut(s) 463, 495
FatI CATG 4 cut(s) 279, 714, 744, 1755
FauI CCCGC 1 cut(s) 1866
FauNDI CATATG 1 cut(s) 171
FbaI TGATCA 1 cut(s) 1290
FblI GTMKAC 2 cut(s) 1545, 1729
Fnu4HI GCNGC 2 cut(s) 2112, 2115
FokI GGATG 4 cut(s) 37, 131, 823, 1906
FriOI GRGCYC 2 cut(s) 593, 1869
Fsp4HI GCNGC 2 cut(s) 2112, 2115
FspBI CTAG 3 cut(s) 869, 896, 1068
GluI GCNGC 2 cut(s) 2112, 2115
GsuI CTGGAG 3 cut(s) 326, 1512, 1907
HaeIII GGCC 4 cut(s) 300, 924, 1417, 1779
HapII CCGG 6 cut(s) 375, 932, 1141, 1689, 1848, 1983
Hin1II CATG 4 cut(s) 283, 718, 748, 1759
HpaII CCGG 6 cut(s) 375, 932, 1141, 1689, 1848, 1983
HphI GGTGA 3 cut(s) 508, 589, 2143
Hpy166II GTNNAC 6 cut(s) 683, 970, 1546, 1573, 1730, 2147
Hpy8I GTNNAC 6 cut(s) 683, 970, 1546, 1573, 1730, 2147
Hpy99I CGWCG 1 cut(s) 269
HpyAV CCTTC 7 cut(s) 518, 627, 914, 997, 1403, 1697, 1913
HpyCH4III ACNGT 2 cut(s) 34, 1075
HpyCH4IV ACGT 5 cut(s) 150, 197, 956, 1320, 1880
HpyF10VI GCNNNNNNNGC 1 cut(s) 574
HpyF3I CTNAG 8 cut(s) 249, 349, 356, 800, 811, 978, 1566, 1941
HpySE526I ACGT 5 cut(s) 150, 197, 956, 1320, 1880
Hsp92II CATG 4 cut(s) 283, 718, 748, 1759
Kpn2I TCCGGA 1 cut(s) 1688
Ksp22I TGATCA 1 cut(s) 1290
LmnI GCTCC 4 cut(s) 42, 365, 1642, 2002
Lsp1109I GCAGC 2 cut(s) 2101, 2123
LweI GCATC 5 cut(s) 109, 663, 673, 845, 1186
MabI ACCWGGT 1 cut(s) 2131
MaeI CTAG 3 cut(s) 869, 896, 1068
MaeII ACGT 5 cut(s) 150, 197, 956, 1320, 1880
MaeIII GTNAC 5 cut(s) 595, 672, 747, 1008, 1253
MfeI CAATTG 1 cut(s) 1258
MflI RGATCY 4 cut(s) 274, 308, 763, 1825
MhlI GDGCHC 5 cut(s) 593, 824, 1752, 1869, 1999
MluCI AATT 8 cut(s) 778, 982, 1082, 1121, 1153, 1218, 1258, 1346
MlyI GAGTC 3 cut(s) 1503, 1692, 2142
MmeI TCCRAC 1 cut(s) 1502
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1688
MroXI GAANNNNTTC 2 cut(s) 475, 986
MseI TTAA 5 cut(s) 53, 422, 777, 1095, 1634
MspA1I CMGCKG 2 cut(s) 1128, 2114
MspI CCGG 6 cut(s) 375, 932, 1141, 1689, 1848, 1983
MspR9I CCNGG 6 cut(s) 601, 1141, 1592, 1983, 1984, 2133
MunI CAATTG 1 cut(s) 1258
Mva1269I GAATGC 1 cut(s) 4
MvaI CCWGG 3 cut(s) 601, 1592, 2133
MwoI GCNNNNNNNGC 1 cut(s) 574
NciI CCSGG 3 cut(s) 1141, 1983, 1984
NdeI CATATG 1 cut(s) 171
NlaIII CATG 4 cut(s) 283, 718, 748, 1759
NlaIV GGNNCC 1 cut(s) 823
NmuCI GTSAC 4 cut(s) 595, 672, 747, 1253
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 1759
PaeR7I CTCGAG 1 cut(s) 1307
PagI TCATGA 1 cut(s) 279
PciI ACATGT 1 cut(s) 1755
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PctI GAATGC 1 cut(s) 4
PdmI GAANNNNTTC 2 cut(s) 475, 986
PflMI CCANNNNNTGG 1 cut(s) 1822
PkrI GCNGC 2 cut(s) 2113, 2116
PleI GAGTC 3 cut(s) 1502, 1692, 2142
PpsI GAGTC 3 cut(s) 1502, 1692, 2142
PscI ACATGT 1 cut(s) 1755
PshAI GACNNNNGTC 1 cut(s) 99
PshBI ATTAAT 1 cut(s) 777
PsiI TTATAA 1 cut(s) 507
Psp124BI GAGCTC 2 cut(s) 593, 1869
Psp1406I AACGTT 1 cut(s) 956
Psp6I CCWGG 3 cut(s) 599, 1590, 2131
PspEI GGTNACC 1 cut(s) 595
PspGI CCWGG 3 cut(s) 599, 1590, 2131
PspN4I GGNNCC 1 cut(s) 823
PspPI GGNCC 4 cut(s) 299, 527, 1415, 1922
PspXI VCTCGAGB 1 cut(s) 1307
PsrI GAACNNNNNNTAC 2 cut(s) 1889, 1921
PsuI RGATCY 4 cut(s) 274, 308, 763, 1825
PvuII CAGCTG 1 cut(s) 2114
RsaI GTAC 4 cut(s) 433, 930, 1907, 2130
RsaNI GTAC 4 cut(s) 432, 929, 1906, 2129
SacI GAGCTC 2 cut(s) 593, 1869
SaqAI TTAA 5 cut(s) 53, 422, 777, 1095, 1634
SatI GCNGC 2 cut(s) 2112, 2115
Sau96I GGNCC 4 cut(s) 299, 527, 1415, 1922
SchI GAGTC 3 cut(s) 1503, 1692, 2142
ScrFI CCNGG 6 cut(s) 601, 1141, 1592, 1983, 1984, 2133
SduI GDGCHC 5 cut(s) 593, 824, 1752, 1869, 1999
SexAI ACCWGGT 1 cut(s) 2131
SfaNI GCATC 5 cut(s) 109, 663, 673, 845, 1186
SfcI CTRYAG 2 cut(s) 1024, 1379
Sfr274I CTCGAG 1 cut(s) 1307
SinI GGWCC 2 cut(s) 527, 1922
SlaI CTCGAG 1 cut(s) 1307
SmaI CCCGGG 1 cut(s) 1984
SmlI CTYRAG 5 cut(s) 586, 668, 1307, 1733, 1804
SmoI CTYRAG 5 cut(s) 586, 668, 1307, 1733, 1804
Sse9I AATT 8 cut(s) 778, 982, 1082, 1121, 1153, 1218, 1258, 1346
SsiI CCGC 3 cut(s) 1128, 1859, 1992
SspI AATATT 4 cut(s) 370, 410, 847, 1422
SspMI CTAG 3 cut(s) 869, 896, 1068
SstI GAGCTC 2 cut(s) 593, 1869
StyD4I CCNGG 6 cut(s) 599, 1139, 1590, 1981, 1982, 2131
StyI CCWWGG 1 cut(s) 610
TaaI ACNGT 2 cut(s) 34, 1075
TaiI ACGT 5 cut(s) 153, 200, 959, 1323, 1883
TaqI TCGA 6 cut(s) 162, 267, 606, 1308, 1701, 1721
TaqII GACCGA 1 cut(s) 583
TasI AATT 8 cut(s) 778, 982, 1082, 1121, 1153, 1218, 1258, 1346
Tru1I TTAA 5 cut(s) 53, 422, 777, 1095, 1634
Tru9I TTAA 5 cut(s) 53, 422, 777, 1095, 1634
TscAI CASTG 5 cut(s) 526, 997, 1231, 1306, 1495
TseFI GTSAC 4 cut(s) 595, 672, 747, 1253
TseI GCWGC 2 cut(s) 2111, 2114
Tsp45I GTSAC 4 cut(s) 595, 672, 747, 1253
TspDTI ATGAA 5 cut(s) 188, 1910, 2079, 2085, 2163
TspMI CCCGGG 1 cut(s) 1982
TspRI CASTG 5 cut(s) 526, 997, 1231, 1306, 1495
Van91I CCANNNNNTGG 1 cut(s) 1822
VpaK11BI GGWCC 2 cut(s) 527, 1922
VspI ATTAAT 1 cut(s) 777
XagI CCTNNNNNAGG 1 cut(s) 252
XapI RAATTY 4 cut(s) 982, 1121, 1153, 1346
XbaI TCTAGA 2 cut(s) 868, 895
XceI RCATGY 1 cut(s) 1759
XhoI CTCGAG 1 cut(s) 1307
XmaI CCCGGG 1 cut(s) 1982
XmiI GTMKAC 2 cut(s) 1545, 1729
XmnI GAANNNNTTC 2 cut(s) 475, 986
XspI CTAG 3 cut(s) 869, 896, 1068
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.