RchiOBHm_Chr2g0154841

Leucine rich repeat N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000024
Physical Location & Seq
Forward (+)
71885042 .. 71888090
3049 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52380

Sequence Viewer

Length: 3042 bp
ATGGGAACGAGAATGGGATCATCCTGCTGGGGCTTCTTTTTAGTGCGTTATATTATACTCTTGTTGCTCATTAATGCTGCATGCTGTTTTTCTTTTGCACAAACGCAGACACTTTGCCACGATGATGAGCGCTCTGCCTTGTTGCAATTCAAAGCTAGTTTCAATATAGACAAGTCTGCTTCCCAAGATCCCTTTGCTTATCCGAAAGTTGCATATTGGGGTAGGCTAGAAGGAGATCCTCAAAGGAGTAACTGTTGTTCATGGGATGGTGTTGAATGCAACCGCCACTCTGGCCATGTTATTGGCCTTGACCTGGCCAGCAGCTATCTTCATGGTTCCATCAACTCCAACAGCAGTCTTTTTCAACTTGTTCAGTTGCAGAGGCTTGACCTCTCTGACAACAACTTCAGCTACTCTCAAATACCAACCAGGTTAGGCCATGATCTTACTAGTCTAACATATCTCAACCTATCAATGTCTTCAATTTCTGGCCAAATTCCATCAGAAATTTCATATCTATCCAAGCTGTCTGCCCTTGATCTGTCTTCTACTTACAAGTCCCATCTCAAAATGACCAACTTCGGAAGCCTTGTTCAAAACTTGACCAACATAAAGCAGCTTCATCTTAGTTTGGTAGAGATAGGCTCCACAGTGCCTAATACATTGGTGAATGTGTCTTCTCTCACATCTCTCCGTCTTCAAGCATGTCACTTGGAGGGGCAATTCCCAGTAGGCATTTTCCACCTACCAAACTTGCAAGTACTTGATTTGGCCGATAACTATTATCTAACCGGTTACTTTCCTGAAGAGCTTAACAAGAGCAGTCCCTTGAAGATACTGAATTTGCGGTCAACCAATTTCTCTGGTCATCTACCTGCTTCAATCGGAGACCTTCCTGCCTTAAATTTGTTGAACATAGCATTCTGTACCTTTTATCCCCATGTTCCATCTTCACTTTCCAACCTTACCCAGCTCAATTTCCTTGATCTTTCCTCCTTTTTTTCCAACAACGGTACTTTCAGTGGCCAAGTTACTGATTCCTGGTCTTGGGTTGGAAAGTTGACCAGACTTAACAATTTGTCCCTTGCCGAGACCAACTTAAGGGGAGATTTCCCATGTTTTTTGGCTAATCTGACGCAACTTGTGGAATTAGACCTGAGCTACAATCAAATAACTGGTGAAATCCCATGTTTTTTGGCTAATCTGAAACAGCTTTCGATATTATCCCTGGACCAAAATCAAATAGCTGGTCAAATCCCATCTTGCCTTGGGCAGTTGACCCATTTAACTTCTTTATACGCAGGATACAACAATCTGCAAGGAACGATTCCCAGGTCACTATTCGAGCTTAGAAATCTTGAAGTTTTTTACCTCGACTCAAATAACTTGAGTGGGTATGTTGAATTTGATGGGTTTTCCAAGCTCGAAAAGTTTAGGGTACTTCGTTTGTCGCATAACAAGTTAAATGTGAAGATCAAAACTGGATTTACTGCTATTCCTCCAAAGCTTCAAGTACTAGGATTGGGTTCATGCAACTTAACAGAGTTTCCGGAATTTTTGAAATACGCTGGTGAACTAATGGAACTAGATCTATCCGACAACAATCTTCACGGCCAAATACCAAAATGGATGTGGGATTCAGCTAGTGCAAATCTGTCGTATCTCAACCTCTCTCACAACCACCTAACTGGATTTGAAGAAAATCCGGTCATTATTCCATGGCCTCGGTTAATCTCTTTAGATCTCAGCTCTAACATGTTACGAGGATCACTGCCAATTCCAGGGCCGTCAATGGAACTCTATTCTGTTTCAAATAATGAATACGCAGGAGAAATTCCAGCAACATTCTGCAACGCGTTCCTACACGTTCTTGATTTGTCTAGCAACAACCTGAATGGCATGATTCCCCAATGTTTTGAGAATCTCAGAGATCTTCAGATATTGAAACTGCAGAACAATTCTTTTCACGGGGATATTCCTCAAATATGTTCAAACAGAAGTACGGAGTTAGCAGCGATTGACATGAGTTATAATCAGCTACAAGGGAAGCTCCCAAGATCAATTGCCAATTGTTCTCTGTTGGTGTTTCTTAATTTGGGAAATAATCAGATCAGTGATACCTTCCCATCTTGGTTAGGAACACTTCAACAATTAAAAGTTCTCATTTTGCGGTCCAATGCATTTCATGGCATAATTGGGAAGCCTGCAAGTAGCCATGAGTTTCCTGAGCTGTCCATCATTGATTTATCTAGCAATGATTTTTCAAGTATGTTGCCCTCCGACTACTTAGAGAACTGGAATGCCATGAAATCTGTTGATGCAAACGAGCAAATATACATCCAAGACATGATCACTTTCGGGATTTACTATGGTGATTACAGTGATTACCCGATTACAGTTTTTAGCAAAGGTCGTGAATTGAAGTATGTCAAGACCCCTTATCTTCTGAGACTCGTAGACTTCTCAAGTAACAAATTTCACGGAGAGATCCCAGGTATCATTGGGAACCTAAGAGGGCTTCATTTGCTTAATCTTTCCAACAACACTCTCACTGGCCTCATCCCCTCTTCTCTGGGGAATTTGAGTGCTCTTGAATCGTTGGATCTCTCCCAAAATCAGCTCTCAGGAAAGCTCCCCGGTAATCTGGCGCAACTGACATTCCTTTCATACTTCAATGTATCCCATAATCGTCTCTCGGGGTCCATTCTACAAGGTCGACAATTTGATACATTCCAAGAGGACATGTACCAAGGAAACTCAGGTTTGTGTGGAAAACCTTTGCCAAAGAAATGTGAAGAATCTGACAGCACAACACCACAAACATCAAGCTTTGAACAAGACGAGGACTCTGGATTTCAAATTGAACTAGATTGGTTTGTGGTTCTGCCAGGAGTTGTTGCTGGTCTAATAGTTGGAGTGGTTGGGGGGAACTTTTGGACAACCAAGAAGCATGACTGGTTTGTGGAGACATTCAGCAGGAGTTGGCAGCCAAGAGGCATAAGGCAATGGAGGGACTCAGAACTTAGACTTCATAATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1013

Amino Acids

113.07

Weight (kDa)

5.58

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 117 - 233 1.7e-06 Leucine-rich repeat region
LRR_14 PF23598 250 - 389 1.6e-11 Leucine-rich repeat region
LRR_14 PF23598 375 - 563 2.9e-12 Leucine-rich repeat region
LRR_8 PF13855 428 - 488 2.2e-06 Leucine rich repeat
LRR_8 PF13855 501 - 562 8.1e-06 Leucine rich repeat
LRR_14 PF23598 804 - 894 8.3e-06 Leucine-rich repeat region
LRR_8 PF13855 838 - 898 1.2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2031
Acc36I ACCTGC 1 cut(s) 883
AccI GTMKAC 2 cut(s) 2457, 2716
AccII CGCG 1 cut(s) 1856
AccIII TCCGGA 1 cut(s) 1549
AciI CCGC 3 cut(s) 283, 847, 2170
AclWI GGATC 6 cut(s) 25, 182, 230, 1774, 2482, 2610
AcoI YGGCCR 6 cut(s) 292, 315, 490, 771, 1024, 1612
AcsI RAATTY 9 cut(s) 495, 507, 841, 904, 1403, 1553, 1833, 2474, 2578
AcuI CTGAAG 3 cut(s) 391, 825, 1919
AfaI GTAC 7 cut(s) 762, 928, 1015, 1440, 1515, 2002, 2747
AfeI AGCGCT 1 cut(s) 131
AfiI CCNNNNNNNGG 4 cut(s) 313, 1047, 1101, 1781
AflII CTTAAG 1 cut(s) 1099
AflIII ACRYGT 4 cut(s) 1755, 1854, 1864, 2742
AgeI ACCGGT 1 cut(s) 791
AhlI ACTAGT 1 cut(s) 449
AjnI CCWGG 8 cut(s) 312, 428, 1040, 1227, 1331, 1780, 2491, 2887
AloI GAACNNNNNNTCC 2 cut(s) 576, 608
Alw21I GWGCWC 1 cut(s) 2590
Alw26I GTCTC 5 cut(s) 882, 1085, 2443, 2696, 2960
AlwI GGATC 6 cut(s) 25, 182, 230, 1774, 2482, 2610
Ama87I CYCGRG 1 cut(s) 2695
Aor13HI TCCGGA 1 cut(s) 1549
Aor51HI AGCGCT 1 cut(s) 131
ApeKI GCWGC 5 cut(s) 77, 321, 616, 2012, 2986
ApoI RAATTY 9 cut(s) 495, 507, 841, 904, 1403, 1553, 1833, 2474, 2578
ArsI GACNNNNNNTTYG 2 cut(s) 1234, 1266
AseI ATTAAT 1 cut(s) 72
AsiGI ACCGGT 1 cut(s) 791
AspLEI GCGC 2 cut(s) 132, 2650
AspS9I GGNCC 4 cut(s) 1231, 1784, 2172, 2700
AsuC2I CCSGG 1 cut(s) 2637
AsuHPI GGTGA 4 cut(s) 679, 1190, 1583, 2384
AvaI CYCGRG 1 cut(s) 2695
AvaII GGWCC 3 cut(s) 1231, 2172, 2700
BalI TGGCCA 4 cut(s) 294, 317, 492, 1026
BbsI GAAGAC 4 cut(s) 471, 537, 669, 689
Bbv12I GWGCWC 1 cut(s) 2590
BbvI GCAGC 5 cut(s) 64, 333, 628, 2024, 2998
BccI CCATC 9 cut(s) 260, 347, 508, 570, 955, 1267, 1403, 2134, 2243
BceAI ACGGC 2 cut(s) 1627, 1771
BcgI CGANNNNNNTGC 2 cut(s) 1638, 1672
BciT130I CCWGG 8 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2889
BciVI GTATCC 2 cut(s) 1298, 2689
BclI TGATCA 1 cut(s) 2349
BcnI CCSGG 1 cut(s) 2637
BcoDI GTCTC 5 cut(s) 882, 1085, 2443, 2696, 2960
BcuI ACTAGT 1 cut(s) 449
BfaI CTAG 9 cut(s) 156, 227, 450, 1517, 1586, 1644, 1881, 2250, 2867
BfmI CTRYAG 1 cut(s) 1949
BfoI RGCGCY 1 cut(s) 133
BfrI CTTAAG 1 cut(s) 1099
BfuAI ACCTGC 1 cut(s) 883
BfuI GTATCC 2 cut(s) 1298, 2689
BglI GCCNNNNNGGC 1 cut(s) 291
BglII AGATCT 3 cut(s) 1588, 1741, 1930
BisI GCNGC 5 cut(s) 78, 322, 617, 2013, 2987
BlsI GCNGC 5 cut(s) 79, 323, 618, 2014, 2988
BmcAI AGTACT 2 cut(s) 762, 1515
Bme1390I CCNGG 9 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2637, 2889
Bme18I GGWCC 3 cut(s) 1231, 2172, 2700
BmeT110I CYCGRG 1 cut(s) 2695
BmgT120I GGNCC 4 cut(s) 1231, 1784, 2172, 2700
BmiI GGNNCC 4 cut(s) 337, 646, 2507, 2701
BmrFI CCNGG 9 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2637, 2889
BmrI ACTGGG 1 cut(s) 722
BmsI GCATC 1 cut(s) 2308
BmuI ACTGGG 1 cut(s) 722
BpiI GAAGAC 4 cut(s) 471, 537, 669, 689
BplI GAGNNNNNCTC 2 cut(s) 629, 661
Bpu10I CCTNAGC 2 cut(s) 1157, 2226
BpuEI CTTGAG 2 cut(s) 1408, 2449
BpuMI CCSGG 1 cut(s) 2637
BsaI GGTCTC 2 cut(s) 882, 1085
BsaJI CCNNGG 9 cut(s) 1227, 1267, 1331, 1718, 1724, 1781, 2491, 2635, 2749
BsaWI WCCGGW 3 cut(s) 791, 1549, 1705
BsaXI ACNNNNNCTCC 2 cut(s) 238, 268
Bsc4I CCNNNNNNNGG 4 cut(s) 313, 1047, 1101, 1781
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 7 cut(s) 728, 1180, 1486, 1693, 2300, 2557, 2960
Bse3DI GCAATG 2 cut(s) 2260, 3011
BseAI TCCGGA 1 cut(s) 1549
BseBI CCWGG 8 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2889
BseDI CCNNGG 9 cut(s) 1227, 1267, 1331, 1718, 1724, 1781, 2491, 2635, 2749
BseGI GGATG 5 cut(s) 20, 271, 1635, 2337, 2559
BseLI CCNNNNNNNGG 4 cut(s) 313, 1047, 1101, 1781
BseMI GCAATG 2 cut(s) 2260, 3011
BseMII CTCAG 8 cut(s) 1148, 1759, 1939, 2217, 2438, 2637, 2772, 3030
BseNI ACTGG 7 cut(s) 728, 1180, 1486, 1693, 2300, 2557, 2960
BseXI GCAGC 5 cut(s) 64, 333, 628, 2024, 2998
BseYI CCCAGC 2 cut(s) 27, 969
Bsh1236I CGCG 1 cut(s) 1856
BshTI ACCGGT 1 cut(s) 791
BsiHKAI GWGCWC 1 cut(s) 2590
BsiHKCI CYCGRG 1 cut(s) 2695
BsiSI CCGG 4 cut(s) 792, 1550, 1706, 2637
BslFI GGGAC 4 cut(s) 544, 810, 1066, 3026
BslI CCNNNNNNNGG 4 cut(s) 313, 1047, 1101, 1781
BsmAI GTCTC 5 cut(s) 882, 1085, 2443, 2696, 2960
BsmBI CGTCTC 1 cut(s) 2696
BsmFI GGGAC 4 cut(s) 544, 810, 1066, 3026
BsmI GAATGC 3 cut(s) 281, 920, 2305
Bso31I GGTCTC 2 cut(s) 882, 1085
BsoBI CYCGRG 1 cut(s) 2695
Bsp1286I GDGCHC 1 cut(s) 2590
Bsp13I TCCGGA 1 cut(s) 1549
Bsp19I CCATGG 1 cut(s) 1718
BspACI CCGC 3 cut(s) 283, 847, 2170
BspCNI CTCAG 8 cut(s) 1149, 1758, 1938, 2218, 2439, 2636, 2771, 3029
BspEI TCCGGA 1 cut(s) 1549
BspFNI CGCG 1 cut(s) 1856
BspLI GGNNCC 4 cut(s) 337, 646, 2507, 2701
BspMAI CTGCAG 1 cut(s) 1953
BspMI ACCTGC 1 cut(s) 883
BspPI GGATC 6 cut(s) 25, 182, 230, 1774, 2482, 2610
BspQI GCTCTTC 1 cut(s) 801
BspTI CTTAAG 1 cut(s) 1099
BspTNI GGTCTC 2 cut(s) 882, 1085
BsrDI GCAATG 2 cut(s) 2260, 3011
BsrFI RCCGGY 1 cut(s) 791
BsrI ACTGG 7 cut(s) 728, 1180, 1486, 1693, 2300, 2557, 2960
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 9 cut(s) 1227, 1267, 1331, 1718, 1724, 1781, 2491, 2635, 2749
BssT1I CCWWGG 3 cut(s) 1267, 1718, 2749
Bst2UI CCWGG 8 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2889
Bst4CI ACNGT 5 cut(s) 254, 652, 1013, 2381, 2398
Bst6I CTCTTC 2 cut(s) 801, 2572
BstAFI CTTAAG 1 cut(s) 1099
BstC8I GCNNGC 3 cut(s) 82, 319, 2205
BstDSI CCRYGG 1 cut(s) 1718
BstF5I GGATG 5 cut(s) 20, 271, 1635, 2337, 2559
BstFNI CGCG 1 cut(s) 1856
BstH2I RGCGCY 1 cut(s) 133
BstHHI GCGC 2 cut(s) 132, 2650
BstMAI GTCTC 5 cut(s) 882, 1085, 2443, 2696, 2960
BstMWI GCNNNNNNNGC 2 cut(s) 291, 2524
BstNI CCWGG 8 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2889
BstNSI RCATGY 4 cut(s) 84, 708, 1759, 2746
BstSCI CCNGG 9 cut(s) 312, 428, 1040, 1227, 1331, 1780, 2491, 2635, 2887
BstSFI CTRYAG 1 cut(s) 1949
BstUI CGCG 1 cut(s) 1856
BstV1I GCAGC 5 cut(s) 64, 333, 628, 2024, 2998
BstV2I GAAGAC 4 cut(s) 471, 537, 669, 689
BstX2I RGATCY 7 cut(s) 187, 235, 1588, 1741, 1930, 2487, 2602
BstXI CCANNNNNNTGG 2 cut(s) 302, 1688
BstYI RGATCY 7 cut(s) 187, 235, 1588, 1741, 1930, 2487, 2602
BsuI GTATCC 2 cut(s) 1298, 2689
BtgI CCRYGG 1 cut(s) 1718
BtsCI GGATG 5 cut(s) 20, 271, 1635, 2337, 2559
BtsI GCAGTG 1 cut(s) 1769
BtsIMutI CAGTG 6 cut(s) 657, 1027, 1769, 2119, 2386, 2550
BveI ACCTGC 1 cut(s) 883
Cac8I GCNNGC 3 cut(s) 82, 319, 2205
CfoI GCGC 2 cut(s) 132, 2650
Cfr10I RCCGGY 1 cut(s) 791
Cfr13I GGNCC 4 cut(s) 1231, 1784, 2172, 2700
CseI GACGC 1 cut(s) 1144
CsiI ACCWGGT 1 cut(s) 428
Csp6I GTAC 7 cut(s) 761, 927, 1014, 1439, 1514, 2001, 2746
CspAI ACCGGT 1 cut(s) 791
CviQI GTAC 7 cut(s) 761, 927, 1014, 1439, 1514, 2001, 2746
EaeI YGGCCR 6 cut(s) 292, 315, 490, 771, 1024, 1612
Eam1104I CTCTTC 2 cut(s) 801, 2572
EarI CTCTTC 2 cut(s) 801, 2572
Eco130I CCWWGG 3 cut(s) 1267, 1718, 2749
Eco31I GGTCTC 2 cut(s) 882, 1085
Eco47I GGWCC 3 cut(s) 1231, 2172, 2700
Eco47III AGCGCT 1 cut(s) 131
Eco57I CTGAAG 3 cut(s) 391, 825, 1919
Eco88I CYCGRG 1 cut(s) 2695
EcoRII CCWGG 8 cut(s) 312, 428, 1040, 1227, 1331, 1780, 2491, 2887
EcoT14I CCWWGG 3 cut(s) 1267, 1718, 2749
EcoT22I ATGCAT 1 cut(s) 2182
ErhI CCWWGG 3 cut(s) 1267, 1718, 2749
Esp3I CGTCTC 1 cut(s) 2696
FaqI GGGAC 4 cut(s) 544, 810, 1066, 3026
FbaI TGATCA 1 cut(s) 2349
FblI GTMKAC 2 cut(s) 2457, 2716
Fnu4HI GCNGC 5 cut(s) 78, 322, 617, 2013, 2987
FokI GGATG 5 cut(s) 7, 278, 1642, 2324, 2546
Fsp4HI GCNGC 5 cut(s) 78, 322, 617, 2013, 2987
FspBI CTAG 9 cut(s) 156, 227, 450, 1517, 1586, 1644, 1881, 2250, 2867
GlaI GCGC 2 cut(s) 131, 2649
GluI GCNGC 5 cut(s) 78, 322, 617, 2013, 2987
GsaI CCCAGC 2 cut(s) 31, 973
HaeII RGCGCY 1 cut(s) 133
HapII CCGG 4 cut(s) 792, 1550, 1706, 2637
HgaI GACGC 1 cut(s) 1144
HhaI GCGC 2 cut(s) 132, 2650
Hin6I GCGC 2 cut(s) 130, 2648
HinP1I GCGC 2 cut(s) 130, 2648
HincII GTYRAC 4 cut(s) 852, 1062, 1278, 2717
HindII GTYRAC 4 cut(s) 852, 1062, 1278, 2717
HindIII AAGCTT 2 cut(s) 1505, 2827
HpaII CCGG 4 cut(s) 792, 1550, 1706, 2637
HphI GGTGA 4 cut(s) 679, 1190, 1583, 2384
Hpy166II GTNNAC 6 cut(s) 852, 1062, 1278, 1574, 2458, 2717
Hpy8I GTNNAC 6 cut(s) 852, 1062, 1278, 1574, 2458, 2717
HpyAV CCTTC 3 cut(s) 224, 902, 2131
HpyCH4III ACNGT 5 cut(s) 254, 652, 1013, 2381, 2398
HpyCH4IV ACGT 1 cut(s) 1866
HpyF10VI GCNNNNNNNGC 2 cut(s) 291, 2524
HpySE526I ACGT 1 cut(s) 1866
HspAI GCGC 2 cut(s) 130, 2648
Kpn2I TCCGGA 1 cut(s) 1549
Ksp22I TGATCA 1 cut(s) 2349
LguI GCTCTTC 1 cut(s) 801
LmnI GCTCC 3 cut(s) 650, 2055, 2637
Lsp1109I GCAGC 5 cut(s) 64, 333, 628, 2024, 2998
LweI GCATC 1 cut(s) 2308
MabI ACCWGGT 1 cut(s) 428
MaeI CTAG 9 cut(s) 156, 227, 450, 1517, 1586, 1644, 1881, 2250, 2867
MaeII ACGT 1 cut(s) 1866
MaeIII GTNAC 7 cut(s) 248, 707, 794, 1030, 1335, 1758, 2468
MfeI CAATTG 2 cut(s) 2061, 2068
MflI RGATCY 7 cut(s) 187, 235, 1588, 1741, 1930, 2487, 2602
MhlI GDGCHC 1 cut(s) 2590
MlsI TGGCCA 4 cut(s) 294, 317, 492, 1026
MluI ACGCGT 1 cut(s) 1854
MluNI TGGCCA 4 cut(s) 294, 317, 492, 1026
MlyI GAGTC 4 cut(s) 1370, 2445, 2840, 3008
MmeI TCCRAC 9 cut(s) 372, 984, 1029, 1033, 1620, 2304, 2562, 2580, 2893
Mox20I TGGCCA 4 cut(s) 294, 317, 492, 1026
Mph1103I ATGCAT 1 cut(s) 2182
MroI TCCGGA 1 cut(s) 1549
MscI TGGCCA 4 cut(s) 294, 317, 492, 1026
MslI CAYNNNNRTG 1 cut(s) 123
Msp20I TGGCCA 4 cut(s) 294, 317, 492, 1026
MspCI CTTAAG 1 cut(s) 1099
MspI CCGG 4 cut(s) 792, 1550, 1706, 2637
MspR9I CCNGG 9 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2637, 2889
MunI CAATTG 2 cut(s) 2061, 2068
Mva1269I GAATGC 3 cut(s) 281, 920, 2305
MvaI CCWGG 8 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2889
MvnI CGCG 1 cut(s) 1856
MwoI GCNNNNNNNGC 2 cut(s) 291, 2524
NciI CCSGG 1 cut(s) 2637
NcoI CCATGG 1 cut(s) 1718
NlaIV GGNNCC 4 cut(s) 337, 646, 2507, 2701
NmeAIII GCCGAG 1 cut(s) 1114
NmuCI GTSAC 2 cut(s) 707, 1335
NsiI ATGCAT 1 cut(s) 2182
NspI RCATGY 4 cut(s) 84, 708, 1759, 2746
PaeI GCATGC 1 cut(s) 84
PciI ACATGT 2 cut(s) 1755, 2742
PciSI GCTCTTC 1 cut(s) 801
PctI GAATGC 3 cut(s) 281, 920, 2305
PfeI GAWTC 7 cut(s) 1037, 1327, 1637, 1903, 1921, 2594, 2798
PinAI ACCGGT 1 cut(s) 791
PkrI GCNGC 5 cut(s) 79, 323, 618, 2014, 2988
PleI GAGTC 4 cut(s) 1370, 2445, 2840, 3008
PpsI GAGTC 4 cut(s) 1370, 2445, 2840, 3008
PscI ACATGT 2 cut(s) 1755, 2742
PshBI ATTAAT 1 cut(s) 72
PsiI TTATAA 1 cut(s) 2031
Psp6I CCWGG 8 cut(s) 312, 428, 1040, 1227, 1331, 1780, 2491, 2887
PspFI CCCAGC 2 cut(s) 27, 969
PspGI CCWGG 8 cut(s) 312, 428, 1040, 1227, 1331, 1780, 2491, 2887
PspN4I GGNNCC 4 cut(s) 337, 646, 2507, 2701
PspPI GGNCC 4 cut(s) 1231, 1784, 2172, 2700
PsrI GAACNNNNNNTAC 2 cut(s) 241, 273
PstI CTGCAG 1 cut(s) 1953
PsuI RGATCY 7 cut(s) 187, 235, 1588, 1741, 1930, 2487, 2602
RsaI GTAC 7 cut(s) 762, 928, 1015, 1440, 1515, 2002, 2747
RsaNI GTAC 7 cut(s) 761, 927, 1014, 1439, 1514, 2001, 2746
RseI CAYNNNNRTG 1 cut(s) 123
SalI GTCGAC 1 cut(s) 2715
SapI GCTCTTC 1 cut(s) 801
SatI GCNGC 5 cut(s) 78, 322, 617, 2013, 2987
Sau96I GGNCC 4 cut(s) 1231, 1784, 2172, 2700
ScaI AGTACT 2 cut(s) 762, 1515
SchI GAGTC 4 cut(s) 1370, 2445, 2840, 3008
ScrFI CCNGG 9 cut(s) 314, 430, 1042, 1229, 1333, 1782, 2493, 2637, 2889
SduI GDGCHC 1 cut(s) 2590
SexAI ACCWGGT 1 cut(s) 428
SfaNI GCATC 1 cut(s) 2308
SfcI CTRYAG 1 cut(s) 1949
SinI GGWCC 3 cut(s) 1231, 2172, 2700
SmiMI CAYNNNNRTG 1 cut(s) 123
SmlI CTYRAG 3 cut(s) 1099, 1387, 2464
SmoI CTYRAG 3 cut(s) 1099, 1387, 2464
SpeI ACTAGT 1 cut(s) 449
SphI GCATGC 1 cut(s) 84
SsiI CCGC 3 cut(s) 283, 847, 2170
SspMI CTAG 9 cut(s) 156, 227, 450, 1517, 1586, 1644, 1881, 2250, 2867
StyD4I CCNGG 9 cut(s) 312, 428, 1040, 1227, 1331, 1780, 2491, 2635, 2887
StyI CCWWGG 3 cut(s) 1267, 1718, 2749
TaaI ACNGT 5 cut(s) 254, 652, 1013, 2381, 2398
TaiI ACGT 1 cut(s) 1869
TaqI TCGA 5 cut(s) 1217, 1344, 1374, 1425, 2716
TatI WGTACW 2 cut(s) 760, 1513
TfiI GAWTC 7 cut(s) 1037, 1327, 1637, 1903, 1921, 2594, 2798
TscAI CASTG 6 cut(s) 657, 1027, 1776, 2119, 2386, 2557
TseFI GTSAC 2 cut(s) 707, 1335
TseI GCWGC 5 cut(s) 77, 321, 616, 2012, 2986
Tsp45I GTSAC 2 cut(s) 707, 1335
TspGWI ACGGA 3 cut(s) 683, 2018, 2496
TspRI CASTG 6 cut(s) 657, 1027, 1776, 2119, 2386, 2557
Vha464I CTTAAG 1 cut(s) 1099
VpaK11BI GGWCC 3 cut(s) 1231, 2172, 2700
VspI ATTAAT 1 cut(s) 72
XapI RAATTY 9 cut(s) 495, 507, 841, 904, 1403, 1553, 1833, 2474, 2578
XceI RCATGY 4 cut(s) 84, 708, 1759, 2746
XcmI CCANNNNNNNNNTGG 1 cut(s) 1629
XmiI GTMKAC 2 cut(s) 2457, 2716
XspI CTAG 9 cut(s) 156, 227, 450, 1517, 1586, 1644, 1881, 2250, 2867
ZrmI AGTACT 2 cut(s) 762, 1515
Zsp2I ATGCAT 1 cut(s) 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.