MD09G1124800.v1.1

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
9644833 .. 9646818
1986 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1124800.v1.1.491

Sequence Viewer

Length: 1986 bp
ATGGCTTCATTTCATGACGTTTCCGCAGGCCAATTCTTAGTTCCTGATTCCTTGTCTTGTTTTGGAAAATTAACCAAGCTCAACTACTTGGATCTTTCGGATATTAACTTACAAGGGAATTTCCCACGTTTTGTGGCTAACCTGACCCAACTTGCGTTTCTAGACTTGTTTGACAATTCAATAACTGGTGAAATCCCATCTTGGCTCGCATTAGAGTTGACCCAATTAACTTTTCTGCGGCTCACCTTCAACAATTTGCAAGGAGTAATTCCTAAATCGCTTTTCCACCTTAGAAATCTTGAATTTCTTGGCCTTTCCTCTAATAATTTGAGTGGATTAGTTGAGTTTGATGAGTTTTCCAACCTCAAAAAGTTGAAGAAACTTGGTTTATCGGACAACAAGTTATTCGTGCGTGTCAAATCTGGTTCGAGTGCTACTCTTCCAAAGTTTGAAGTTCTAAAGTTGGCTGAATGCAACTTGACAGAGTTTCCAGAATTTTTGAAAAATCAATACGAATTGGGAGCCCTAGACCTTTATGATAACAATATTCATGGCCAAATACCAAAATGGCTCTGGAATGCAACTAGAGAAACTCTGGTCAATCTCAACCTCGATTATAACTTCTTAACAGGCCTTGAAGAAAATCCAGTCACTCTTCCATGGAAAAATCTGCAGCTTTTTAGTCTTGACACTAATCGGTTACAAGGGTCATTGCCAATTCCACCACAATCTATCATATCTTACAATGTCGGCAACAATAATTATAGTGGAGAAGTTTCACCTTTGTTCTGCAACTTGAATTATCTTCAAGTTCTTAATTTGGGCAACAACAACCTGAGTGGCATGCTTCCACGGTGTTTGGGGAAGTCCAGTAGCTTGGAAATGCTGGCCTTGACTTATAATTCTTTCCATGGCAATATTCCTCCATTTTGTGCTAACAAAAATAGTTTGAAATTGGTTTTGTTGGGTTACAATCGGTTACAGGGGAAGCTACCAAGATCAATGGCCGATTGCACTCGGTTAGAGTTTCTTGACATTGGCAACAATCAGATCAGTGACATCTTCCCTTCTTGGTTAGGGGTACTTCCAGTATTGAGGGGTCTCATTTTGGGGTCGAATGCATTTCATGGGATAATTGGGAAGCCTCAAACTAATCATGAGTTCCCAAACTTGTGCATCATTGATTTATCCAACAATCTGTTTTCAGGTATGTTCCCTTCTAAGTACATAGAGAACTGGAATTTCATGAAATATGTTGTCGTAAACGATGGAAGCCGGTACTTTGAAGTCTCATCGAACGTCAGCACAAATAAATATGGAAATTACTATCAATTTTCATACGATATGATAATTCCTGTAAAAGGTGTTAAGTTGACATATTATCGGACCCCTTATGATTTGAGACTCATAGATTTCTCAAGTAATAGATTTGAAGGAGAGATTCCAGCAAGTATCATTGGGAGTCTAAGAGAACTTCAGTTGCTAAACCTCTCCAACAACGCTTTCTCTGGTCACATCCCCTCATCTTTAGGGAACTTGACAGCTTTTGAATCGTTGGATCTCTCTCAAAACAAGCTCTCCGGAAGGATCCCCAGTAGCTTGGCACAACTCACTTTCCTTGAGTACTTCAATGTGTCACATAACCATCTTTGGGGACCTATACCACTTGGCCAACAATTCGGTACATTTCTAGAAGATTCATACCAAGGAAACTCAGGTTTGTGTGGAAAGCCTTTGTCCAAGAAATGCGAGGGTTATGAGAGCTCGAGGCTGGCGCCACCATCAAGCTTTGAAGAAGATGAAAGGGCTGGATTTCCATTTGAGTTTGATTGGTATGTAGTCTTGCCAGGAGTTGTTAGCGGACTAATAGTGGGAGTGGTTGCTGGAAACACGTTGGCAGACAAAAAGCATGAATGGTTTGCGGAGAAATTCAGCAGGAGGAGGAAGCCAACAACCACAAGGGCGAGGAGGGGACGCAGAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

662

Amino Acids

74.34

Weight (kDa)

7.56

Isoelectric Point (pI)

37.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 16 - 205 6.1e-11 Leucine-rich repeat region
LRR_8 PF13855 75 - 135 1.3e-07 Leucine rich repeat
LRR_14 PF23598 467 - 547 2.7e-06 Leucine-rich repeat region
LRR_8 PF13855 490 - 550 4.7e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 618, 900
AccB1I GGYRCC 1 cut(s) 1774
AccIII TCCGGA 1 cut(s) 1580
AciI CCGC 4 cut(s) 24, 238, 1860, 1922
AclWI GGATC 4 cut(s) 99, 1566, 1582, 1595
AcoI YGGCCR 3 cut(s) 553, 1005, 1669
AcsI RAATTY 5 cut(s) 118, 302, 494, 1240, 1928
AcuI CTGAAG 1 cut(s) 1460
AcyI GRCGYC 1 cut(s) 1775
AfaI GTAC 5 cut(s) 1083, 1226, 1280, 1625, 1684
AfiI CCNNNNNNNGG 2 cut(s) 1361, 1651
AflIII ACRYGT 1 cut(s) 1890
AjnI CCWGG 1 cut(s) 1846
AjuI GAANNNNNNNTTGG 8 cut(s) 24, 56, 141, 173, 216, 248, 1487, 1519
AluBI AGCT 9 cut(s) 79, 676, 876, 991, 1544, 1576, 1599, 1764, 1788
AluI AGCT 9 cut(s) 79, 676, 876, 991, 1544, 1576, 1599, 1764, 1788
Alw21I GWGCWC 1 cut(s) 1766
Alw26I GTCTC 3 cut(s) 1106, 1294, 1396
AlwI GGATC 4 cut(s) 99, 1566, 1582, 1595
Ama87I CYCGRG 1 cut(s) 1765
Aor13HI TCCGGA 1 cut(s) 1580
AoxI GGCC 7 cut(s) 28, 310, 553, 631, 888, 1005, 1669
ApeKI GCWGC 1 cut(s) 673
ApoI RAATTY 5 cut(s) 118, 302, 494, 1240, 1928
AspLEI GCGC 1 cut(s) 1777
AspS9I GGNCC 2 cut(s) 1386, 1655
AsuHPI GGTGA 3 cut(s) 200, 235, 771
AvaI CYCGRG 1 cut(s) 1765
AvaII GGWCC 2 cut(s) 1386, 1655
BalI TGGCCA 2 cut(s) 555, 1671
BamHI GGATCC 1 cut(s) 1587
BanI GGYRCC 1 cut(s) 1774
BanII GRGCYC 2 cut(s) 526, 1766
BarI GAAGNNNNNNTAC 2 cut(s) 1201, 1233
Bbv12I GWGCWC 1 cut(s) 1766
BbvI GCAGC 1 cut(s) 685
BccI CCATC 4 cut(s) 205, 1262, 1653, 1789
BciT130I CCWGG 1 cut(s) 1848
BcoDI GTCTC 3 cut(s) 1106, 1294, 1396
BfaI CTAG 5 cut(s) 161, 527, 585, 1691, 1984
BfmI CTRYAG 1 cut(s) 671
BfoI RGCGCY 1 cut(s) 1778
BisI GCNGC 2 cut(s) 239, 674
BlsI GCNGC 2 cut(s) 240, 675
BmcAI AGTACT 1 cut(s) 1625
Bme1390I CCNGG 1 cut(s) 1848
Bme18I GGWCC 2 cut(s) 1386, 1655
BmeT110I CYCGRG 1 cut(s) 1765
BmgT120I GGNCC 2 cut(s) 1386, 1655
BmiI GGNNCC 5 cut(s) 523, 1388, 1589, 1656, 1776
BmrFI CCNGG 1 cut(s) 1848
BmrI ACTGGG 1 cut(s) 1587
BmsI GCATC 1 cut(s) 1185
BmuI ACTGGG 1 cut(s) 1587
BplI GAGNNNNNCTC 2 cut(s) 421, 453
BpuEI CTTGAG 2 cut(s) 1402, 1640
BsaHI GRCGYC 1 cut(s) 1775
BsaI GGTCTC 1 cut(s) 1106
BsaJI CCNNGG 4 cut(s) 659, 851, 910, 1705
BsaWI WCCGGW 1 cut(s) 1580
BsaXI ACNNNNNCTCC 2 cut(s) 1562, 1592
Bsc4I CCNNNNNNNGG 2 cut(s) 1361, 1651
Bse118I RCCGGY 1 cut(s) 1275
Bse1I ACTGG 6 cut(s) 190, 647, 870, 1088, 1241, 1593
Bse3DI GCAATG 1 cut(s) 710
BseAI TCCGGA 1 cut(s) 1580
BseBI CCWGG 1 cut(s) 1848
BseDI CCNNGG 4 cut(s) 659, 851, 910, 1705
BseGI GGATG 1 cut(s) 1515
BseLI CCNNNNNNNGG 2 cut(s) 1361, 1651
BseMI GCAATG 1 cut(s) 710
BseMII CTCAG 2 cut(s) 827, 1728
BseNI ACTGG 6 cut(s) 190, 647, 870, 1088, 1241, 1593
BseRI GAGGAG 2 cut(s) 1954, 1981
BseXI GCAGC 1 cut(s) 685
BshFI GGCC 7 cut(s) 30, 312, 555, 633, 890, 1007, 1671
BshNI GGYRCC 1 cut(s) 1774
BsiHKAI GWGCWC 1 cut(s) 1766
BsiHKCI CYCGRG 1 cut(s) 1765
BsiSI CCGG 2 cut(s) 1276, 1581
BslFI GGGAC 1 cut(s) 1668
BslI CCNNNNNNNGG 2 cut(s) 1361, 1651
BsmAI GTCTC 3 cut(s) 1106, 1294, 1396
BsmFI GGGAC 1 cut(s) 1668
BsmI GAATGC 3 cut(s) 476, 583, 1123
BsnI GGCC 7 cut(s) 30, 312, 555, 633, 890, 1007, 1671
Bso31I GGTCTC 1 cut(s) 1106
BsoBI CYCGRG 1 cut(s) 1765
Bsp1286I GDGCHC 2 cut(s) 526, 1766
Bsp13I TCCGGA 1 cut(s) 1580
Bsp143I GATC 5 cut(s) 91, 998, 1050, 1558, 1587
Bsp19I CCATGG 2 cut(s) 659, 910
BspACI CCGC 4 cut(s) 24, 238, 1860, 1922
BspANI GGCC 7 cut(s) 30, 312, 555, 633, 890, 1007, 1671
BspCNI CTCAG 2 cut(s) 828, 1727
BspEI TCCGGA 1 cut(s) 1580
BspHI TCATGA 3 cut(s) 13, 1156, 1245
BspLI GGNNCC 5 cut(s) 523, 1388, 1589, 1656, 1776
BspMAI CTGCAG 1 cut(s) 675
BspPI GGATC 4 cut(s) 99, 1566, 1582, 1595
BspT107I GGYRCC 1 cut(s) 1774
BspTNI GGTCTC 1 cut(s) 1106
BsrDI GCAATG 1 cut(s) 710
BsrFI RCCGGY 1 cut(s) 1275
BsrI ACTGG 6 cut(s) 190, 647, 870, 1088, 1241, 1593
BssAI RCCGGY 1 cut(s) 1275
BssECI CCNNGG 4 cut(s) 659, 851, 910, 1705
BssMI GATC 5 cut(s) 91, 998, 1050, 1558, 1587
BssNI GRCGYC 1 cut(s) 1775
BssT1I CCWWGG 3 cut(s) 659, 910, 1705
Bst2UI CCWGG 1 cut(s) 1848
Bst4CI ACNGT 1 cut(s) 855
Bst6I CTCTTC 2 cut(s) 444, 660
BstACI GRCGYC 1 cut(s) 1775
BstC8I GCNNGC 5 cut(s) 28, 207, 845, 888, 1773
BstDEI CTNAG 6 cut(s) 37, 290, 836, 1221, 1466, 1714
BstDSI CCRYGG 3 cut(s) 659, 851, 910
BstENI CCTNNNNNAGG 1 cut(s) 1359
BstF5I GGATG 1 cut(s) 1515
BstH2I RGCGCY 1 cut(s) 1778
BstHHI GCGC 1 cut(s) 1777
BstKTI GATC 5 cut(s) 94, 1001, 1053, 1561, 1590
BstMAI GTCTC 3 cut(s) 1106, 1294, 1396
BstMBI GATC 5 cut(s) 91, 998, 1050, 1558, 1587
BstNI CCWGG 1 cut(s) 1848
BstNSI RCATGY 1 cut(s) 847
BstSCI CCNGG 1 cut(s) 1846
BstSFI CTRYAG 1 cut(s) 671
BstV1I GCAGC 1 cut(s) 685
BstX2I RGATCY 3 cut(s) 91, 1558, 1587
BstXI CCANNNNNNTGG 2 cut(s) 877, 1600
BstYI RGATCY 3 cut(s) 91, 1558, 1587
BsuRI GGCC 7 cut(s) 30, 312, 555, 633, 890, 1007, 1671
BtgI CCRYGG 3 cut(s) 659, 851, 910
BtsCI GGATG 1 cut(s) 1515
BtsIMutI CAGTG 1 cut(s) 1060
Cac8I GCNNGC 5 cut(s) 28, 207, 845, 888, 1773
CciI TCATGA 3 cut(s) 13, 1156, 1245
CfoI GCGC 1 cut(s) 1777
Cfr10I RCCGGY 1 cut(s) 1275
Cfr13I GGNCC 2 cut(s) 1386, 1655
Csp6I GTAC 5 cut(s) 1082, 1225, 1279, 1624, 1683
CspCI CAANNNNNGTGG 4 cut(s) 820, 840, 855, 875
CviAII CATG 9 cut(s) 14, 551, 660, 844, 911, 1127, 1157, 1246, 1910
CviQI GTAC 5 cut(s) 1082, 1225, 1279, 1624, 1683
DdeI CTNAG 6 cut(s) 37, 290, 836, 1221, 1466, 1714
DinI GGCGCC 1 cut(s) 1776
DpnI GATC 5 cut(s) 93, 1000, 1052, 1560, 1589
DpnII GATC 5 cut(s) 91, 998, 1050, 1558, 1587
EaeI YGGCCR 3 cut(s) 553, 1005, 1669
Eam1104I CTCTTC 2 cut(s) 444, 660
EarI CTCTTC 2 cut(s) 444, 660
Ecl136II GAGCTC 1 cut(s) 1764
Eco130I CCWWGG 3 cut(s) 659, 910, 1705
Eco147I AGGCCT 1 cut(s) 633
Eco24I GRGCYC 2 cut(s) 526, 1766
Eco31I GGTCTC 1 cut(s) 1106
Eco47I GGWCC 2 cut(s) 1386, 1655
Eco53kI GAGCTC 1 cut(s) 1764
Eco57I CTGAAG 1 cut(s) 1460
Eco88I CYCGRG 1 cut(s) 1765
EcoICRI GAGCTC 1 cut(s) 1764
EcoNI CCTNNNNNAGG 1 cut(s) 1359
EcoO109I RGGNCCY 1 cut(s) 1655
EcoRII CCWGG 1 cut(s) 1846
EcoT14I CCWWGG 3 cut(s) 659, 910, 1705
EcoT22I ATGCAT 1 cut(s) 1123
EcoT38I GRGCYC 2 cut(s) 526, 1766
EgeI GGCGCC 1 cut(s) 1776
EheI GGCGCC 1 cut(s) 1776
ErhI CCWWGG 3 cut(s) 659, 910, 1705
FaeI CATG 9 cut(s) 17, 554, 663, 847, 914, 1130, 1160, 1249, 1913
FaqI GGGAC 1 cut(s) 1668
FatI CATG 9 cut(s) 13, 550, 659, 843, 910, 1126, 1156, 1245, 1909
Fnu4HI GCNGC 2 cut(s) 239, 674
FokI GGATG 1 cut(s) 1502
FriOI GRGCYC 2 cut(s) 526, 1766
Fsp4HI GCNGC 2 cut(s) 239, 674
FspBI CTAG 5 cut(s) 161, 527, 585, 1691, 1984
GlaI GCGC 1 cut(s) 1776
GluI GCNGC 2 cut(s) 239, 674
HaeII RGCGCY 1 cut(s) 1778
HaeIII GGCC 7 cut(s) 30, 312, 555, 633, 890, 1007, 1671
HapII CCGG 2 cut(s) 1276, 1581
HhaI GCGC 1 cut(s) 1777
Hin1I GRCGYC 1 cut(s) 1775
Hin1II CATG 9 cut(s) 17, 554, 663, 847, 914, 1130, 1160, 1249, 1913
Hin6I GCGC 1 cut(s) 1775
HinP1I GCGC 1 cut(s) 1775
HincII GTYRAC 2 cut(s) 219, 1374
HindII GTYRAC 2 cut(s) 219, 1374
HindIII AAGCTT 1 cut(s) 1786
HinfI GANTC 6 cut(s) 47, 1404, 1441, 1462, 1550, 1697
HpaII CCGG 2 cut(s) 1276, 1581
HphI GGTGA 3 cut(s) 200, 235, 771
Hpy166II GTNNAC 3 cut(s) 219, 1264, 1374
Hpy188I TCNGA 4 cut(s) 100, 394, 1050, 1386
Hpy8I GTNNAC 3 cut(s) 219, 1264, 1374
HpyAV CCTTC 5 cut(s) 256, 1077, 1227, 1427, 1578
HpyCH4III ACNGT 1 cut(s) 855
HpyCH4IV ACGT 4 cut(s) 18, 127, 1299, 1892
HpyCH4V TGCA 8 cut(s) 259, 474, 581, 673, 792, 1014, 1121, 1176
HpyF3I CTNAG 6 cut(s) 37, 290, 836, 1221, 1466, 1714
HpySE526I ACGT 4 cut(s) 18, 127, 1299, 1892
Hsp92I GRCGYC 1 cut(s) 1775
Hsp92II CATG 9 cut(s) 17, 554, 663, 847, 914, 1130, 1160, 1249, 1913
HspAI GCGC 1 cut(s) 1775
KasI GGCGCC 1 cut(s) 1774
Kpn2I TCCGGA 1 cut(s) 1580
Kzo9I GATC 5 cut(s) 91, 998, 1050, 1558, 1587
LmnI GCTCC 1 cut(s) 521
Lsp1109I GCAGC 1 cut(s) 685
LweI GCATC 1 cut(s) 1185
MaeI CTAG 5 cut(s) 161, 527, 585, 1691, 1984
MaeII ACGT 4 cut(s) 18, 127, 1299, 1892
MaeIII GTNAC 7 cut(s) 649, 699, 968, 978, 1055, 1511, 1635
MalI GATC 5 cut(s) 93, 1000, 1052, 1560, 1589
MboI GATC 5 cut(s) 91, 998, 1050, 1558, 1587
MboII GAAGA 9 cut(s) 388, 431, 647, 650, 797, 1054, 1706, 1805, 1808
MflI RGATCY 3 cut(s) 91, 1558, 1587
MhlI GDGCHC 2 cut(s) 526, 1766
MlsI TGGCCA 2 cut(s) 555, 1671
MluNI TGGCCA 2 cut(s) 555, 1671
Mly113I GGCGCC 1 cut(s) 1775
MlyI GAGTC 2 cut(s) 1398, 1471
MmeI TCCRAC 4 cut(s) 384, 1215, 1518, 1536
Mox20I TGGCCA 2 cut(s) 555, 1671
Mph1103I ATGCAT 1 cut(s) 1123
MroI TCCGGA 1 cut(s) 1580
MscI TGGCCA 2 cut(s) 555, 1671
MseI TTAA 6 cut(s) 71, 105, 227, 626, 816, 1368
Msp20I TGGCCA 2 cut(s) 555, 1671
MspI CCGG 2 cut(s) 1276, 1581
MspR9I CCNGG 1 cut(s) 1848
Mva1269I GAATGC 3 cut(s) 476, 583, 1123
MvaI CCWGG 1 cut(s) 1848
NarI GGCGCC 1 cut(s) 1775
NcoI CCATGG 2 cut(s) 659, 910
NdeII GATC 5 cut(s) 91, 998, 1050, 1558, 1587
NlaIII CATG 9 cut(s) 17, 554, 663, 847, 914, 1130, 1160, 1249, 1913
NlaIV GGNNCC 5 cut(s) 523, 1388, 1589, 1656, 1776
NmuCI GTSAC 4 cut(s) 649, 1055, 1511, 1635
NsiI ATGCAT 1 cut(s) 1123
NspI RCATGY 1 cut(s) 847
PaeI GCATGC 1 cut(s) 847
PaeR7I CTCGAG 1 cut(s) 1765
PagI TCATGA 3 cut(s) 13, 1156, 1245
PceI AGGCCT 1 cut(s) 633
PctI GAATGC 3 cut(s) 476, 583, 1123
PfeI GAWTC 4 cut(s) 47, 1441, 1550, 1697
PkrI GCNGC 2 cut(s) 240, 675
PleI GAGTC 2 cut(s) 1398, 1470
PluTI GGCGCC 1 cut(s) 1778
PpsI GAGTC 2 cut(s) 1398, 1470
PpuMI RGGWCCY 1 cut(s) 1655
PsiI TTATAA 2 cut(s) 618, 900
Psp124BI GAGCTC 1 cut(s) 1766
Psp5II RGGWCCY 1 cut(s) 1655
Psp6I CCWGG 1 cut(s) 1846
PspGI CCWGG 1 cut(s) 1846
PspN4I GGNNCC 5 cut(s) 523, 1388, 1589, 1656, 1776
PspPI GGNCC 2 cut(s) 1386, 1655
PspPPI RGGWCCY 1 cut(s) 1655
PspXI VCTCGAGB 1 cut(s) 1765
PstI CTGCAG 1 cut(s) 675
PsuI RGATCY 3 cut(s) 91, 1558, 1587
RsaI GTAC 5 cut(s) 1083, 1226, 1280, 1625, 1684
RsaNI GTAC 5 cut(s) 1082, 1225, 1279, 1624, 1683
SacI GAGCTC 1 cut(s) 1766
SaqAI TTAA 6 cut(s) 71, 105, 227, 626, 816, 1368
SatI GCNGC 2 cut(s) 239, 674
Sau3AI GATC 5 cut(s) 91, 998, 1050, 1558, 1587
Sau96I GGNCC 2 cut(s) 1386, 1655
ScaI AGTACT 1 cut(s) 1625
SchI GAGTC 2 cut(s) 1398, 1471
ScrFI CCNGG 1 cut(s) 1848
SduI GDGCHC 2 cut(s) 526, 1766
SfaNI GCATC 1 cut(s) 1185
SfcI CTRYAG 1 cut(s) 671
SfoI GGCGCC 1 cut(s) 1776
Sfr274I CTCGAG 1 cut(s) 1765
SinI GGWCC 2 cut(s) 1386, 1655
SlaI CTCGAG 1 cut(s) 1765
SmlI CTYRAG 3 cut(s) 1417, 1619, 1765
SmoI CTYRAG 3 cut(s) 1417, 1619, 1765
SphI GCATGC 1 cut(s) 847
SseBI AGGCCT 1 cut(s) 633
SsiI CCGC 4 cut(s) 24, 238, 1860, 1922
SspDI GGCGCC 1 cut(s) 1774
SspI AATATT 2 cut(s) 547, 919
SspMI CTAG 5 cut(s) 161, 527, 585, 1691, 1984
SstI GAGCTC 1 cut(s) 1766
StuI AGGCCT 1 cut(s) 633
StyD4I CCNGG 1 cut(s) 1846
StyI CCWWGG 3 cut(s) 659, 910, 1705
TaaI ACNGT 1 cut(s) 855
TaiI ACGT 4 cut(s) 21, 130, 1302, 1895
TaqI TCGA 5 cut(s) 428, 612, 1115, 1295, 1766
TatI WGTACW 2 cut(s) 1224, 1623
TauI GCSGC 1 cut(s) 241
TfiI GAWTC 4 cut(s) 47, 1441, 1550, 1697
Tru1I TTAA 6 cut(s) 71, 105, 227, 626, 816, 1368
Tru9I TTAA 6 cut(s) 71, 105, 227, 626, 816, 1368
TscAI CASTG 1 cut(s) 1060
TseFI GTSAC 4 cut(s) 649, 1055, 1511, 1635
TseI GCWGC 1 cut(s) 673
Tsp45I GTSAC 4 cut(s) 649, 1055, 1511, 1635
TspDTI ATGAA 8 cut(s) 539, 1115, 1234, 1262, 1326, 1689, 1815, 1926
TspRI CASTG 1 cut(s) 1060
VpaK11BI GGWCC 2 cut(s) 1386, 1655
XagI CCTNNNNNAGG 1 cut(s) 1359
XapI RAATTY 5 cut(s) 118, 302, 494, 1240, 1928
XbaI TCTAGA 2 cut(s) 160, 1690
XceI RCATGY 1 cut(s) 847
XcmI CCANNNNNNNNNTGG 1 cut(s) 570
XhoI CTCGAG 1 cut(s) 1765
XspI CTAG 5 cut(s) 161, 527, 585, 1691, 1984
ZrmI AGTACT 1 cut(s) 1625
Zsp2I ATGCAT 1 cut(s) 1123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.