Rroxscaffold_4G00288530

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000024
Physical Location & Seq
Forward (+)
9298846 .. 9301659
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00288530.1

Sequence Viewer

Length: 2814 bp
ATGTTTCGGTTGCTAATTGATCTTGATACTACGTACACTTTGCGGCAGCTATCTTATTGTCATGATGAGGAGAGCTCTGCCTTGCTACAATTCAAGCAAAGCTTTACTATCAATGCATCTGCTTCGGGTTTAAAGGGTGCCTACCCGAAAGTGTTGTCCTGGAAACAAGCTCAAGGAGGAAACAACATCAGCTGCTGCGCATGGGATGGGGTCGAGTGTGACGAACATACGGGTCATGTGATCGGGCTTGATCTCAGAAGCAGTTGTCTCTACGGCTCTATTCACTCCAACAGTTCCCTCTTCAGTCTTGTTCACCTTCAGAGGCTGAACCTTGCCGATAATCACTTCAATTACTCTCAAATTCCTACTAGCATTAGAAATTTTCCAAGGCTCACCCATCTCGACCTCTCTGGCTCTGTATTTTCTGGTCGAGTCCCATCGGAAGTTTCACAGTTGGTCAAGTTGTCACTTCTTAATCTTTCTTTCAATACCGACCCTTCTTCGGGTGTAGGATTGTTGAAACTTGATGGATCCAATTTCAGAAGTCTAGTTCAAAACTTAACTAATCTTCAACATCTTCGTCTCCGTTTCATCAACATATCTTCGCCGATACCTGAATCCATGGCCAATTTATCATTTTTGACAACCCTTGACTTACATCAGTGTCTCTTGTTTGGAGACTTCCCAGTTAGAATTTTCCACTTACAAAACTTGCAAAATCTCTATCTCAGAGACAACCTAGATCTCATTGGTTATTTGCCTGAATTTAATAAAAGTAGTCGTCTCATAACTCTCGATCTTCATGGAACTAGATTTTCAGGGAACTTAGCCTTTTCGGTCAAAAAGCTTACTTATTTGAAACAGTTGGATGTTGGTGCGTGCAGGTTTTCAGCAGGGTTGGTTCCATCTTCGCTAGGTAATCTCATAGAACTGACTTATCTAGACATTTCAAAAAACCAATTTGGGGGTCCTGTTCCAGATTCTTTTGCAAACCTTACAAAATTGTCTGTTTTTAGGATTAGTACGAGTCTACTAACTGGTCCAATCCCATCCTGGCTGGGTAATTTTAGTGAACTAGAGTACCTAAACTTTGGTTATAATAGATTGGGTGGTTCAATTCCTACATCATTTTCCAAGCTCACGAATCTCCAGATTCTTTATCTTCAGTCCAATAACCTGAGCGGTATAGTGGAGTTTCAAACATTTCAAAACCTGCAAAATCTCAACCAACTCGATCTAAGATCTAATTCTCTGGAATTTTTCTCTGAATCCACAGCTGTGAATGCAAGTACTGTTCCACAATTCACCCATCTAAAGTTAACTTCATGCAACGTAAGAGAGTTCCCATATTTCCTGAGATATCAAAAACATTTGGAGCAGTTGTTGCTCAATAAAAACAAAATCTATGGTCGAGTACCTAAATGGATGTGGAACATGAGCACAGAATCCTTGATTCAGCTAGACATTTCTGAAAATTTCCTTTCAGGCCAACTTCCTTTTTTCATTCCTTGGGTCAACCAAGTATACTTGAGTCTTGCTTCCAACATGTTCCATGGGGCACTGCCGATACCTCCATCGTCCACTTTAGTCTATCAAGCTAATGACAACAAATTTACTGGAAAAGTTTCACCAGTGATCTGCAATATGAGTTCTCTTATGGCCCTTGATTTGTCCAATAACAACTTGAGTGGCATGATTCCACAGTGTTTCGGAAACTTTAGTGATCCATTGACCCTTTTAATTCTTGGAAATAACTCGTTTCATGGCACTCTACCGCAAACATACACCAACAAAAGCAACTTGAGGATACTTGATGCGAGTCAAAATCAATTGCAAGGGCAACTACCAAGGTCATTGACGAATTGTCTGATGCTTGACACTTTGGTCCTGTCAAACAATTACTTCAATGATGTCTTTCCCTTTTGGATGGTTACTCTACCTGAGTTGAAAATTTTGGCAATGCGGCATAATGCGTTCCAAGGATTGATAGGAAAGCCTGAAAACAATCAGCAGTTCCCAAAGTTGCGTGTCTTAGATATTTCTAACAACAACTTCACAGGCAAGTTTGTAGCTGAATACATCTTCTCCAAGTATGCCATGAGACCAATCAACCAGTCGGCCTATATGACGGTTGACATCAATTACATCTCTGGTAATGATTGGCTGACTTATAGTTCCACAATTAAAATGACCATTAAAGGTGTGGATAGATACCATTCAAGGGTTCAAGAAGCTTTTGCAGTCATTGATATCTCAAGCAACAAATTTGAAGGGAAGATTGATGAATACATTGGGAGTCTAAAAGGGCTTTGGTCACTTAATTTTTCCAATAACCTTCTCAGCGGTCGTATCCCGTCATCGTTTGGGCACTTGACGAATCTTGAAGCACTAGACCTTTCCAATAACAAGCTCTGGGGAGAGATTCCCAAACAATTGGCACAGCTGACATTCCTTGCACAATTCAATGTCTCTCACAACAATCTTACAGGTCCAATACCGCGTGGACCGCAGTTCAATACCTTCTCCATCACTTCGTATGAGGGAAATCCCGGATTGTGCGGAGATCCTTTGCCAAAGAGATGTCAGAGCTCTAACGCCCCGCCGCAACTGCCACCTTCAAACACAGAAGAAAATGATTCTGGAATTGAACTTGAATGGACTTTTGTGCTCGCTGGATGCGGAAGTGGGTTCGTGGTGGGAGTTGTGCTTGCAGACCTGGCCATCACACGGAGGCGTGAGTTGTTTCTTGAGGTAGTTGGAATGTTGATCAGACTAATGGAAAGGATCACAAGCTTGAAGAGGTTTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

937

Amino Acids

105.01

Weight (kDa)

8.24

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 21 - 74 2.7e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 83 - 173 2.3e-06 Leucine-rich repeat region
LRR_14 PF23598 184 - 291 1.5e-07 Leucine-rich repeat region
LRR_14 PF23598 275 - 490 5.2e-14 Leucine-rich repeat region
LRR_8 PF13855 334 - 393 2.2e-07 Leucine rich repeat
LRR_8 PF13855 625 - 685 4.8e-06 Leucine rich repeat
LRR_8 PF13855 748 - 804 4.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1098
AasI GACNNNNNNGTC 1 cut(s) 1883
Acc16I TGCGCA 1 cut(s) 199
Acc36I ACCTGC 2 cut(s) 873, 1221
AccB1I GGYRCC 1 cut(s) 137
AccBSI CCGCTC 1 cut(s) 1182
AccI GTMKAC 2 cut(s) 1030, 1524
AccII CGCG 1 cut(s) 2500
AclWI GGATC 5 cut(s) 525, 538, 1718, 2558, 2792
AcoI YGGCCR 2 cut(s) 624, 2718
AcsI RAATTY 9 cut(s) 360, 379, 693, 764, 1256, 1474, 1610, 1950, 2264
AcuI CTGAAG 3 cut(s) 286, 302, 1148
AfaI GTAC 5 cut(s) 35, 1024, 1082, 1291, 1416
AfiI CCNNNNNNNGG 5 cut(s) 502, 503, 964, 2221, 2727
AflIII ACRYGT 1 cut(s) 1545
AhdI GACNNNNNGTC 1 cut(s) 1863
AjnI CCWGG 3 cut(s) 158, 1052, 2715
AleI CACNNNNGTG 1 cut(s) 1277
Alw21I GWGCWC 4 cut(s) 77, 1442, 2591, 2670
Alw26I GTCTC 8 cut(s) 272, 587, 671, 672, 726, 788, 2095, 2473
AlwI GGATC 5 cut(s) 525, 538, 1718, 2558, 2792
AlwNI CAGNNNCTG 2 cut(s) 195, 325
AoxI GGCC 5 cut(s) 624, 1486, 1659, 2118, 2718
ApeKI GCWGC 3 cut(s) 46, 192, 195
ApoI RAATTY 9 cut(s) 360, 379, 693, 764, 1256, 1474, 1610, 1950, 2264
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
Asp700I GAANNNNTTC 1 cut(s) 1624
AspLEI GCGC 1 cut(s) 200
AspS9I GGNCC 6 cut(s) 968, 1040, 1660, 1885, 2489, 2504
AsuC2I CCSGG 1 cut(s) 2550
AsuHPI GGTGA 4 cut(s) 305, 385, 1297, 1620
AvaII GGWCC 5 cut(s) 968, 1040, 1885, 2489, 2504
BaeGI GKGCMC 2 cut(s) 1561, 2370
BaeI ACNNNNGTAYC 2 cut(s) 1064, 1097
BalI TGGCCA 2 cut(s) 626, 2720
BamHI GGATCC 1 cut(s) 530
BanI GGYRCC 1 cut(s) 137
BanII GRGCYC 2 cut(s) 77, 2591
Bbv12I GWGCWC 4 cut(s) 77, 1442, 2591, 2670
BbvI GCAGC 3 cut(s) 58, 179, 182
BceAI ACGGC 1 cut(s) 289
BcgI CGANNNNNNTGC 2 cut(s) 105, 139
BciT130I CCWGG 3 cut(s) 160, 1054, 2717
BciVI GTATCC 2 cut(s) 1800, 2360
BclI TGATCA 1 cut(s) 2766
BcnI CCSGG 1 cut(s) 2550
BcoDI GTCTC 8 cut(s) 272, 587, 671, 672, 726, 788, 2095, 2473
BfaI CTAG 9 cut(s) 369, 548, 740, 810, 914, 941, 1076, 1460, 2390
BfuAI ACCTGC 2 cut(s) 873, 1221
BfuI GTATCC 2 cut(s) 1800, 2360
BglII AGATCT 2 cut(s) 742, 1241
BisI GCNGC 6 cut(s) 44, 47, 193, 196, 1964, 2603
BlsI GCNGC 6 cut(s) 45, 48, 194, 197, 1965, 2604
BmcAI AGTACT 1 cut(s) 1291
Bme1390I CCNGG 4 cut(s) 160, 1054, 2550, 2717
Bme18I GGWCC 5 cut(s) 968, 1040, 1885, 2489, 2504
BmeRI GACNNNNNGTC 1 cut(s) 1863
BmgT120I GGNCC 6 cut(s) 968, 1040, 1660, 1885, 2489, 2504
BmiI GGNNCC 4 cut(s) 139, 532, 903, 969
BmrFI CCNGG 4 cut(s) 160, 1054, 2550, 2717
BmrI ACTGGG 1 cut(s) 680
BmsI GCATC 4 cut(s) 125, 1804, 1860, 2666
BmuI ACTGGG 1 cut(s) 680
BplI GAGNNNNNCTC 2 cut(s) 59, 91
BpmI CTGGAG 1 cut(s) 1133
Bpu10I CCTNAGC 1 cut(s) 1178
BpuEI CTTGAG 6 cut(s) 156, 1549, 1705, 1822, 2239, 2768
BpuMI CCSGG 1 cut(s) 2550
BsaAI YACGTR 1 cut(s) 33
BsaI GGTCTC 1 cut(s) 2095
BsaJI CCNNGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
BsaXI ACNNNNNCTCC 4 cut(s) 1367, 1397, 2069, 2099
Bsc4I CCNNNNNNNGG 5 cut(s) 502, 503, 964, 2221, 2727
Bse1I ACTGG 5 cut(s) 686, 1042, 1621, 1631, 2113
Bse3DI GCAATG 1 cut(s) 1965
BseBI CCWGG 3 cut(s) 160, 1054, 2717
BseDI CCNNGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
BseGI GGATG 6 cut(s) 211, 874, 1049, 1431, 1932, 2681
BseLI CCNNNNNNNGG 5 cut(s) 502, 503, 964, 2221, 2727
BseMI GCAATG 1 cut(s) 1965
BseMII CTCAG 6 cut(s) 268, 742, 1169, 1346, 1932, 2353
BseNI ACTGG 5 cut(s) 686, 1042, 1621, 1631, 2113
BseRI GAGGAG 1 cut(s) 83
BseSI GKGCMC 2 cut(s) 1561, 2370
BseXI GCAGC 3 cut(s) 58, 179, 182
BseYI CCCAGC 1 cut(s) 1057
BsgI GTGCAG 1 cut(s) 901
Bsh1236I CGCG 1 cut(s) 2500
Bsh1285I CGRYCG 1 cut(s) 2347
BshFI GGCC 5 cut(s) 626, 1488, 1661, 2120, 2720
BshNI GGYRCC 1 cut(s) 137
BsiEI CGRYCG 1 cut(s) 2347
BsiHKAI GWGCWC 4 cut(s) 77, 1442, 2591, 2670
BsiSI CCGG 1 cut(s) 2550
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 5 cut(s) 502, 503, 964, 2221, 2727
BsmAI GTCTC 8 cut(s) 272, 587, 671, 672, 726, 788, 2095, 2473
BsmBI CGTCTC 2 cut(s) 587, 788
BsmFI GGGAC 1 cut(s) 419
BsmI GAATGC 1 cut(s) 1288
BsnI GGCC 5 cut(s) 626, 1488, 1661, 2120, 2720
Bso31I GGTCTC 1 cut(s) 2095
Bsp1286I GDGCHC 6 cut(s) 77, 1442, 1561, 2370, 2591, 2670
Bsp19I CCATGG 2 cut(s) 621, 1552
BspANI GGCC 5 cut(s) 626, 1488, 1661, 2120, 2720
BspCNI CTCAG 6 cut(s) 267, 741, 1170, 1347, 1933, 2352
BspFNI CGCG 1 cut(s) 2500
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 4 cut(s) 139, 532, 903, 969
BspMI ACCTGC 2 cut(s) 873, 1221
BspPI GGATC 5 cut(s) 525, 538, 1718, 2558, 2792
BspT107I GGYRCC 1 cut(s) 137
BspTNI GGTCTC 1 cut(s) 2095
BsrBI CCGCTC 1 cut(s) 1182
BsrDI GCAATG 1 cut(s) 1965
BsrI ACTGG 5 cut(s) 686, 1042, 1621, 1631, 2113
BssECI CCNNGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
BssNAI GTATAC 1 cut(s) 1525
BssT1I CCWWGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
Bst1107I GTATAC 1 cut(s) 1525
Bst2UI CCWGG 3 cut(s) 160, 1054, 2717
Bst4CI ACNGT 6 cut(s) 293, 453, 864, 1294, 1704, 2131
Bst6I CTCTTC 2 cut(s) 305, 2792
BstAPI GCANNNNNTGC 1 cut(s) 1384
BstBAI YACGTR 1 cut(s) 33
BstC8I GCNNGC 3 cut(s) 880, 2670, 2709
BstDEI CTNAG 9 cut(s) 254, 728, 826, 1178, 1238, 1355, 1941, 2032, 2339
BstDSI CCRYGG 2 cut(s) 621, 1552
BstF5I GGATG 6 cut(s) 211, 874, 1049, 1431, 1932, 2681
BstFNI CGCG 1 cut(s) 2500
BstHHI GCGC 1 cut(s) 200
BstMAI GTCTC 8 cut(s) 272, 587, 671, 672, 726, 788, 2095, 2473
BstMCI CGRYCG 1 cut(s) 2347
BstMWI GCNNNNNNNGC 5 cut(s) 1283, 1384, 2506, 2608, 2717
BstNI CCWGG 3 cut(s) 160, 1054, 2717
BstNSI RCATGY 1 cut(s) 1549
BstSCI CCNGG 4 cut(s) 158, 1052, 2548, 2715
BstSLI GKGCMC 2 cut(s) 1561, 2370
BstSNI TACGTA 1 cut(s) 33
BstUI CGCG 1 cut(s) 2500
BstV1I GCAGC 3 cut(s) 58, 179, 182
BstX2I RGATCY 4 cut(s) 530, 742, 1241, 2563
BstXI CCANNNNNNTGG 1 cut(s) 2434
BstYI RGATCY 4 cut(s) 530, 742, 1241, 2563
BstZ17I GTATAC 1 cut(s) 1525
BsuI GTATCC 2 cut(s) 1800, 2360
BsuRI GGCC 5 cut(s) 626, 1488, 1661, 2120, 2720
BtgI CCRYGG 2 cut(s) 621, 1552
BtsCI GGATG 6 cut(s) 211, 874, 1049, 1431, 1932, 2681
BtsI GCAGTG 1 cut(s) 1559
BtsIMutI CAGTG 4 cut(s) 668, 1559, 1638, 1709
BveI ACCTGC 2 cut(s) 873, 1221
Cac8I GCNNGC 3 cut(s) 880, 2670, 2709
CaiI CAGNNNCTG 2 cut(s) 195, 325
CciI TCATGA 1 cut(s) 61
CfoI GCGC 1 cut(s) 200
Cfr13I GGNCC 6 cut(s) 968, 1040, 1660, 1885, 2489, 2504
Csp6I GTAC 5 cut(s) 34, 1023, 1081, 1290, 1415
CspCI CAANNNNNGTGG 2 cut(s) 1669, 1704
CviQI GTAC 5 cut(s) 34, 1023, 1081, 1290, 1415
DdeI CTNAG 9 cut(s) 254, 728, 826, 1178, 1238, 1355, 1941, 2032, 2339
DraI TTTAAA 1 cut(s) 132
DrdI GACNNNNNNGTC 1 cut(s) 1883
DriI GACNNNNNGTC 1 cut(s) 1863
DseDI GACNNNNNNGTC 1 cut(s) 1883
EaeI YGGCCR 2 cut(s) 624, 2718
Eam1104I CTCTTC 2 cut(s) 305, 2792
Eam1105I GACNNNNNGTC 1 cut(s) 1863
EarI CTCTTC 2 cut(s) 305, 2792
Ecl136II GAGCTC 2 cut(s) 75, 2589
Eco105I TACGTA 1 cut(s) 33
Eco130I CCWWGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
Eco24I GRGCYC 2 cut(s) 77, 2591
Eco31I GGTCTC 1 cut(s) 2095
Eco32I GATATC 2 cut(s) 1361, 2251
Eco47I GGWCC 5 cut(s) 968, 1040, 1885, 2489, 2504
Eco53kI GAGCTC 2 cut(s) 75, 2589
Eco57I CTGAAG 3 cut(s) 286, 302, 1148
EcoICRI GAGCTC 2 cut(s) 75, 2589
EcoO109I RGGNCCY 1 cut(s) 968
EcoRII CCWGG 3 cut(s) 158, 1052, 2715
EcoRV GATATC 2 cut(s) 1361, 2251
EcoT14I CCWWGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
EcoT22I ATGCAT 1 cut(s) 118
EcoT38I GRGCYC 2 cut(s) 77, 2591
ErhI CCWWGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
Esp3I CGTCTC 2 cut(s) 587, 788
FalI AAGNNNNNCTT 2 cut(s) 86, 118
FaqI GGGAC 1 cut(s) 419
FauI CCCGC 1 cut(s) 2607
FbaI TGATCA 1 cut(s) 2766
FblI GTMKAC 2 cut(s) 1030, 1524
Fnu4HI GCNGC 6 cut(s) 44, 47, 193, 196, 1964, 2603
FokI GGATG 6 cut(s) 218, 881, 1036, 1438, 1939, 2688
FriOI GRGCYC 2 cut(s) 77, 2591
Fsp4HI GCNGC 6 cut(s) 44, 47, 193, 196, 1964, 2603
FspBI CTAG 9 cut(s) 369, 548, 740, 810, 914, 941, 1076, 1460, 2390
FspI TGCGCA 1 cut(s) 199
GlaI GCGC 1 cut(s) 199
GluI GCNGC 6 cut(s) 44, 47, 193, 196, 1964, 2603
GsaI CCCAGC 1 cut(s) 1061
GsuI CTGGAG 1 cut(s) 1133
HaeIII GGCC 5 cut(s) 626, 1488, 1661, 2120, 2720
HapII CCGG 1 cut(s) 2550
HhaI GCGC 1 cut(s) 200
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
HincII GTYRAC 3 cut(s) 1320, 1516, 2134
HindII GTYRAC 3 cut(s) 1320, 1516, 2134
HindIII AAGCTT 4 cut(s) 100, 845, 2232, 2791
HpaI GTTAAC 1 cut(s) 1320
HpaII CCGG 1 cut(s) 2550
HphI GGTGA 4 cut(s) 305, 385, 1297, 1620
HpyAV CCTTC 6 cut(s) 326, 507, 2264, 2345, 2530, 2625
HpyCH4III ACNGT 6 cut(s) 293, 453, 864, 1294, 1704, 2131
HpyCH4IV ACGT 2 cut(s) 32, 1332
HpyF10VI GCNNNNNNNGC 5 cut(s) 1283, 1384, 2506, 2608, 2717
HpyF3I CTNAG 9 cut(s) 254, 728, 826, 1178, 1238, 1355, 1941, 2032, 2339
HpySE526I ACGT 2 cut(s) 32, 1332
HspAI GCGC 1 cut(s) 198
Ksp22I TGATCA 1 cut(s) 2766
KspAI GTTAAC 1 cut(s) 1320
LmnI GCTCC 1 cut(s) 1375
Lsp1109I GCAGC 3 cut(s) 58, 179, 182
LweI GCATC 4 cut(s) 125, 1804, 1860, 2666
MaeI CTAG 9 cut(s) 369, 548, 740, 810, 914, 941, 1076, 1460, 2390
MaeII ACGT 2 cut(s) 32, 1332
MaeIII GTNAC 4 cut(s) 218, 465, 1930, 2313
MbiI CCGCTC 1 cut(s) 1182
MfeI CAATTG 2 cut(s) 1829, 2432
MflI RGATCY 4 cut(s) 530, 742, 1241, 2563
MhlI GDGCHC 6 cut(s) 77, 1442, 1561, 2370, 2591, 2670
MlsI TGGCCA 2 cut(s) 626, 2720
MluNI TGGCCA 2 cut(s) 626, 2720
MlyI GAGTC 5 cut(s) 441, 1036, 1540, 1828, 2305
MmeI TCCRAC 4 cut(s) 312, 846, 1566, 2737
Mox20I TGGCCA 2 cut(s) 626, 2720
Mph1103I ATGCAT 1 cut(s) 118
MroXI GAANNNNTTC 1 cut(s) 1624
MscI TGGCCA 2 cut(s) 626, 2720
MseI TTAA 9 cut(s) 131, 474, 560, 768, 1319, 1739, 2184, 2196, 2319
MslI CAYNNNNRTG 1 cut(s) 1277
Msp20I TGGCCA 2 cut(s) 626, 2720
MspA1I CMGCKG 4 cut(s) 192, 1277, 2343, 2443
MspI CCGG 1 cut(s) 2550
MspR9I CCNGG 4 cut(s) 160, 1054, 2550, 2717
MunI CAATTG 2 cut(s) 1829, 2432
Mva1269I GAATGC 1 cut(s) 1288
MvaI CCWGG 3 cut(s) 160, 1054, 2717
MvnI CGCG 1 cut(s) 2500
MwoI GCNNNNNNNGC 5 cut(s) 1283, 1384, 2506, 2608, 2717
NciI CCSGG 1 cut(s) 2550
NcoI CCATGG 2 cut(s) 621, 1552
NlaIV GGNNCC 4 cut(s) 139, 532, 903, 969
NmuCI GTSAC 3 cut(s) 218, 465, 2313
NsbI TGCGCA 1 cut(s) 199
NsiI ATGCAT 1 cut(s) 118
NspI RCATGY 1 cut(s) 1549
OliI CACNNNNGTG 1 cut(s) 1277
PagI TCATGA 1 cut(s) 61
PciI ACATGT 1 cut(s) 1545
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 1 cut(s) 1288
PdmI GAANNNNTTC 1 cut(s) 1624
PfoI TCCNGGA 2 cut(s) 158, 2548
PkrI GCNGC 6 cut(s) 45, 48, 194, 197, 1965, 2604
PleI GAGTC 5 cut(s) 440, 1035, 1539, 1827, 2304
PpsI GAGTC 5 cut(s) 440, 1035, 1539, 1827, 2304
Ppu21I YACGTR 1 cut(s) 33
PpuMI RGGWCCY 1 cut(s) 968
PscI ACATGT 1 cut(s) 1545
PsiI TTATAA 1 cut(s) 1098
Psp124BI GAGCTC 2 cut(s) 77, 2591
Psp5II RGGWCCY 1 cut(s) 968
Psp6I CCWGG 3 cut(s) 158, 1052, 2715
PspFI CCCAGC 1 cut(s) 1057
PspGI CCWGG 3 cut(s) 158, 1052, 2715
PspN4I GGNNCC 4 cut(s) 139, 532, 903, 969
PspPI GGNCC 6 cut(s) 968, 1040, 1660, 1885, 2489, 2504
PspPPI RGGWCCY 1 cut(s) 968
PstNI CAGNNNCTG 2 cut(s) 195, 325
PsuI RGATCY 4 cut(s) 530, 742, 1241, 2563
PvuII CAGCTG 3 cut(s) 192, 1277, 2443
RsaI GTAC 5 cut(s) 35, 1024, 1082, 1291, 1416
RsaNI GTAC 5 cut(s) 34, 1023, 1081, 1290, 1415
RseI CAYNNNNRTG 1 cut(s) 1277
SacI GAGCTC 2 cut(s) 77, 2591
SaqAI TTAA 9 cut(s) 131, 474, 560, 768, 1319, 1739, 2184, 2196, 2319
SatI GCNGC 6 cut(s) 44, 47, 193, 196, 1964, 2603
Sau96I GGNCC 6 cut(s) 968, 1040, 1660, 1885, 2489, 2504
ScaI AGTACT 1 cut(s) 1291
SchI GAGTC 5 cut(s) 441, 1036, 1540, 1828, 2305
ScrFI CCNGG 4 cut(s) 160, 1054, 2550, 2717
SduI GDGCHC 6 cut(s) 77, 1442, 1561, 2370, 2591, 2670
SfaNI GCATC 4 cut(s) 125, 1804, 1860, 2666
SinI GGWCC 5 cut(s) 968, 1040, 1885, 2489, 2504
SmiMI CAYNNNNRTG 1 cut(s) 1277
SmlI CTYRAG 6 cut(s) 171, 1528, 1684, 1801, 2254, 2747
SmoI CTYRAG 6 cut(s) 171, 1528, 1684, 1801, 2254, 2747
SnaBI TACGTA 1 cut(s) 33
SspMI CTAG 9 cut(s) 369, 548, 740, 810, 914, 941, 1076, 1460, 2390
SstI GAGCTC 2 cut(s) 77, 2591
StyD4I CCNGG 4 cut(s) 158, 1052, 2548, 2715
StyI CCWWGG 6 cut(s) 386, 621, 1508, 1552, 1847, 1978
TaaI ACNGT 6 cut(s) 293, 453, 864, 1294, 1704, 2131
TaiI ACGT 2 cut(s) 35, 1335
TaqI TCGA 6 cut(s) 213, 402, 430, 795, 1233, 1411
TaqII GACCGA 1 cut(s) 826
TatI WGTACW 1 cut(s) 1289
TauI GCSGC 3 cut(s) 46, 1966, 2605
Tru1I TTAA 9 cut(s) 131, 474, 560, 768, 1319, 1739, 2184, 2196, 2319
Tru9I TTAA 9 cut(s) 131, 474, 560, 768, 1319, 1739, 2184, 2196, 2319
TscAI CASTG 4 cut(s) 668, 1566, 1638, 1709
TseFI GTSAC 3 cut(s) 218, 465, 2313
TseI GCWGC 3 cut(s) 46, 192, 195
Tsp45I GTSAC 3 cut(s) 218, 465, 2313
TspDTI ATGAA 6 cut(s) 580, 791, 1314, 1492, 1751, 2298
TspGWI ACGGA 2 cut(s) 575, 2743
TspRI CASTG 4 cut(s) 668, 1566, 1638, 1709
VpaK11BI GGWCC 5 cut(s) 968, 1040, 1885, 2489, 2504
XapI RAATTY 9 cut(s) 360, 379, 693, 764, 1256, 1474, 1610, 1950, 2264
XbaI TCTAGA 1 cut(s) 940
XceI RCATGY 1 cut(s) 1549
XcmI CCANNNNNNNNNTGG 2 cut(s) 1050, 2200
XmiI GTMKAC 2 cut(s) 1030, 1524
XmnI GAANNNNTTC 1 cut(s) 1624
XspI CTAG 9 cut(s) 369, 548, 740, 810, 914, 941, 1076, 1460, 2390
ZrmI AGTACT 1 cut(s) 1291
Zsp2I ATGCAT 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.