MD17G1115100.v1.1

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
9836420 .. 9837736
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1115100.v1.1.491

Sequence Viewer

Length: 1317 bp
ATGGGACTGCGATCGTCTTGGCGGTTTAATGTTTTCTCATTTCAATGTTTTATTTTTATGTTGCTCAATATTACCCAGTACTGTTTCTGTTTCTTACTTGTGCAGACACAAACCATAGCCCATGATGATGAGTGCTCTGCCTTGCTGCAATTCAAGGGTAGCTTTACGATAAGAAAATCTGCTTCTGATGAGCTTTTTGCATATCCAAAGACTGGATCTTGGATGCGAGAAGGAGATCAAAATCGGAGCAACTGTTGTTTGTGGGATGGTGTTGAGTGCCATGAGGAGTCTCGCCATGTCATTGGCCTTGACCTCAGGAGCAGCTTTCTTTATGGTTCTATCAATTCCAACAGCAGCCTCTTTCAACTCGTTCACTTACAGAGGCTTGACCTCGCAGATAATGACTTCAATTTCTCTCCAATACCATCACGTTTAGGTCATCATCTTACATGTTTGACGTACCTAAACCTCTCATATTCCGTATTTTCTGGCCAAATTCCAATCGAAATTTCAAAGCTATCAAAGTTGTCAACCCTTGATCTGTCTTCTAATAATGATTTGGAGCTTAAGAGAACCAACCTGAGAAGCCTAATCCAAAACTTCACCAGCATAAAAGAACTTGATCTCAGCGACGTGGGCATACATTCCACCGTTCCTGATATCCTGAGGAATGCAACTTCTCTCACAGTTCTCTCACTTAGGACATGTCAGTTGTATGGGGAATTCCCAATAGGTATTTTCCAGCCACCAAACTTAGAGGTACTTGATTTGTATGAAAACTTCAACCTAGCCGGTTATATTCCTACCTTTAACAAGACCAATTCCTTCAAGGTATTGGATGTTGCCGAGACGAGTTTCTATGGTCAGTTGCCTAATTCTATCGGAAACCTTCATTCCTTAAACACTTTGAGCATCTCATTTTGCAATTTTTATCCCCGTGTTCCATCTTCCCTCAGAAACCTTACACAGCTCACTTACCTTGACATTTCTTCATTCTACGACATTGACCATACTTATTCCAACAAAACAAGCCAATTAGTTCCGGATTCCTGGTCTTGGATCGGAAAGCTAATGAAACTTCATGTCTTGGGGCTTGCATATTCCAACTTATGGGGAAATTTTCCATACTTCGTGGCTAACCTAACGCAACTTGCATATCTAGACTTGAGCTTTAATGATATAAGTGGTGAAATCCCATCTTGTATTATGAATTTAACCCAATTGACTTATCTTGCCCTTTCCTCCAATAAGTTGAATGGAATAGTTGAGTTTGATCAGTTTTCTAAGCTCCGAAGCTTACTTCACTTCGATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

439

Amino Acids

49.89

Weight (kDa)

5.64

Isoelectric Point (pI)

36.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 116 - 234 7.5e-07 Leucine-rich repeat region
LRR_14 PF23598 252 - 334 8.3e-07 Leucine-rich repeat region
LRR_14 PF23598 350 - 431 2.6e-07 Leucine-rich repeat region
LRR_8 PF13855 359 - 418 1.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 212, 1110
AccIII TCCGGA 1 cut(s) 1042
AciI CCGC 1 cut(s) 22
AclWI GGATC 2 cut(s) 223, 1067
AcoI YGGCCR 1 cut(s) 490
AcsI RAATTY 5 cut(s) 495, 507, 722, 1117, 1210
AfaI GTAC 3 cut(s) 80, 461, 762
AfiI CCNNNNNNNGG 3 cut(s) 212, 1056, 1110
AflII CTTAAG 1 cut(s) 566
AflIII ACRYGT 2 cut(s) 449, 704
AgsI TTSAA 8 cut(s) 44, 154, 365, 409, 513, 784, 829, 1255
AjiI CACGTC 1 cut(s) 634
AjnI CCWGG 1 cut(s) 1049
AjuI GAANNNNNNNTTGG 2 cut(s) 493, 525
Alw21I GWGCWC 1 cut(s) 137
Alw26I GTCTC 2 cut(s) 294, 842
AlwI GGATC 2 cut(s) 223, 1067
Aor13HI TCCGGA 1 cut(s) 1042
AoxI GGCC 2 cut(s) 304, 490
ApeKI GCWGC 3 cut(s) 145, 321, 354
ApoI RAATTY 5 cut(s) 495, 507, 722, 1117, 1210
AsuHPI GGTGA 2 cut(s) 595, 1199
AxyI CCTNAGG 2 cut(s) 314, 665
BalI TGGCCA 1 cut(s) 492
BarI GAAGNNNNNNTAC 2 cut(s) 764, 796
BbsI GAAGAC 1 cut(s) 537
Bbv12I GWGCWC 1 cut(s) 137
BbvI GCAGC 3 cut(s) 132, 333, 366
BccI CCATC 4 cut(s) 260, 433, 952, 1204
BciT130I CCWGG 1 cut(s) 1051
BclI TGATCA 1 cut(s) 1273
BcoDI GTCTC 2 cut(s) 294, 842
BfaI CTAG 2 cut(s) 788, 1160
BfrI CTTAAG 1 cut(s) 566
BisI GCNGC 3 cut(s) 146, 322, 355
BlsI GCNGC 3 cut(s) 147, 323, 356
BmcAI AGTACT 1 cut(s) 80
Bme1390I CCNGG 1 cut(s) 1051
BmgBI CACGTC 1 cut(s) 634
BmrFI CCNGG 1 cut(s) 1051
BmrI ACTGGG 1 cut(s) 70
BmsI GCATC 2 cut(s) 213, 921
BmuI ACTGGG 1 cut(s) 70
BpiI GAAGAC 1 cut(s) 537
BpuEI CTTGAG 1 cut(s) 1186
BsaBI GATNNNNATC 1 cut(s) 240
BsaWI WCCGGW 1 cut(s) 1042
BsaXI ACNNNNNCTCC 2 cut(s) 238, 268
Bsc4I CCNNNNNNNGG 3 cut(s) 212, 1056, 1110
Bse118I RCCGGY 1 cut(s) 791
Bse1I ACTGG 2 cut(s) 76, 217
Bse21I CCTNAGG 2 cut(s) 314, 665
Bse8I GATNNNNATC 1 cut(s) 240
BseAI TCCGGA 1 cut(s) 1042
BseBI CCWGG 1 cut(s) 1051
BseGI GGATG 3 cut(s) 228, 271, 844
BseJI GATNNNNATC 1 cut(s) 240
BseLI CCNNNNNNNGG 3 cut(s) 212, 1056, 1110
BseMII CTCAG 5 cut(s) 328, 572, 640, 656, 967
BseNI ACTGG 2 cut(s) 76, 217
BseRI GAGGAG 1 cut(s) 299
BseXI GCAGC 3 cut(s) 132, 333, 366
BsgI GTGCAG 1 cut(s) 122
Bsh1285I CGRYCG 1 cut(s) 14
BshFI GGCC 2 cut(s) 306, 492
BsiEI CGRYCG 1 cut(s) 14
BsiHKAI GWGCWC 1 cut(s) 137
BsiSI CCGG 2 cut(s) 792, 1043
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 3 cut(s) 212, 1056, 1110
BsmAI GTCTC 2 cut(s) 294, 842
BsmBI CGTCTC 1 cut(s) 842
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 2 cut(s) 306, 492
Bsp1286I GDGCHC 1 cut(s) 137
Bsp13I TCCGGA 1 cut(s) 1042
Bsp143I GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
BspACI CCGC 1 cut(s) 22
BspANI GGCC 2 cut(s) 306, 492
BspCNI CTCAG 5 cut(s) 327, 573, 639, 657, 966
BspEI TCCGGA 1 cut(s) 1042
BspPI GGATC 2 cut(s) 223, 1067
BspTI CTTAAG 1 cut(s) 566
BsrFI RCCGGY 1 cut(s) 791
BsrI ACTGG 2 cut(s) 76, 217
BssAI RCCGGY 1 cut(s) 791
BssMI GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
Bst2UI CCWGG 1 cut(s) 1051
Bst4CI ACNGT 4 cut(s) 83, 254, 652, 688
BstAFI CTTAAG 1 cut(s) 566
BstC8I GCNNGC 1 cut(s) 1095
BstDEI CTNAG 8 cut(s) 314, 581, 626, 665, 698, 754, 953, 1284
BstF5I GGATG 3 cut(s) 228, 271, 844
BstKTI GATC 7 cut(s) 14, 218, 238, 541, 625, 1062, 1276
BstMAI GTCTC 2 cut(s) 294, 842
BstMBI GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
BstMCI CGRYCG 1 cut(s) 14
BstMWI GCNNNNNNNGC 1 cut(s) 636
BstNI CCWGG 1 cut(s) 1051
BstNSI RCATGY 2 cut(s) 453, 708
BstSCI CCNGG 1 cut(s) 1049
BstV1I GCAGC 3 cut(s) 132, 333, 366
BstV2I GAAGAC 1 cut(s) 537
BstX2I RGATCY 1 cut(s) 215
BstXI CCANNNNNNTGG 1 cut(s) 302
BstYI RGATCY 1 cut(s) 215
Bsu36I CCTNAGG 2 cut(s) 314, 665
BsuRI GGCC 2 cut(s) 306, 492
BtrI CACGTC 1 cut(s) 634
BtsCI GGATG 3 cut(s) 228, 271, 844
Cac8I GCNNGC 1 cut(s) 1095
Cfr10I RCCGGY 1 cut(s) 791
Csp6I GTAC 3 cut(s) 79, 460, 761
CviAII CATG 6 cut(s) 122, 281, 296, 450, 705, 1082
CviQI GTAC 3 cut(s) 79, 460, 761
DdeI CTNAG 8 cut(s) 314, 581, 626, 665, 698, 754, 953, 1284
DpnI GATC 7 cut(s) 13, 217, 237, 540, 624, 1061, 1275
DpnII GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
EaeI YGGCCR 1 cut(s) 490
Eco32I GATATC 1 cut(s) 661
Eco81I CCTNAGG 2 cut(s) 314, 665
EcoRI GAATTC 1 cut(s) 722
EcoRII CCWGG 1 cut(s) 1049
EcoRV GATATC 1 cut(s) 661
Esp3I CGTCTC 1 cut(s) 842
FaeI CATG 6 cut(s) 125, 284, 299, 453, 708, 1085
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FaqI GGGAC 1 cut(s) 18
FatI CATG 6 cut(s) 121, 280, 295, 449, 704, 1081
FbaI TGATCA 1 cut(s) 1273
Fnu4HI GCNGC 3 cut(s) 146, 322, 355
FokI GGATG 3 cut(s) 235, 278, 851
Fsp4HI GCNGC 3 cut(s) 146, 322, 355
FspBI CTAG 2 cut(s) 788, 1160
GluI GCNGC 3 cut(s) 146, 322, 355
HaeIII GGCC 2 cut(s) 306, 492
HapII CCGG 2 cut(s) 792, 1043
Hin1II CATG 6 cut(s) 125, 284, 299, 453, 708, 1085
HincII GTYRAC 1 cut(s) 531
HindII GTYRAC 1 cut(s) 531
HindIII AAGCTT 1 cut(s) 1294
HinfI GANTC 2 cut(s) 287, 1046
HpaII CCGG 2 cut(s) 792, 1043
HphI GGTGA 2 cut(s) 595, 1199
Hpy166II GTNNAC 2 cut(s) 373, 531
Hpy188I TCNGA 6 cut(s) 187, 246, 884, 956, 1064, 1292
Hpy188III TCNNGA 5 cut(s) 316, 656, 664, 1043, 1160
Hpy8I GTNNAC 2 cut(s) 373, 531
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 3 cut(s) 224, 835, 899
HpyCH4III ACNGT 4 cut(s) 83, 254, 652, 688
HpyCH4IV ACGT 3 cut(s) 430, 458, 633
HpyCH4V TGCA 7 cut(s) 103, 148, 200, 674, 924, 1097, 1154
HpyF10VI GCNNNNNNNGC 1 cut(s) 636
HpyF3I CTNAG 8 cut(s) 314, 581, 626, 665, 698, 754, 953, 1284
HpySE526I ACGT 3 cut(s) 430, 458, 633
Hsp92II CATG 6 cut(s) 125, 284, 299, 453, 708, 1085
Kpn2I TCCGGA 1 cut(s) 1042
Ksp22I TGATCA 1 cut(s) 1273
Kzo9I GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
LmnI GCTCC 4 cut(s) 246, 318, 562, 1293
Lsp1109I GCAGC 3 cut(s) 132, 333, 366
LweI GCATC 2 cut(s) 213, 921
MaeI CTAG 2 cut(s) 788, 1160
MaeII ACGT 3 cut(s) 430, 458, 633
MalI GATC 7 cut(s) 13, 217, 237, 540, 624, 1061, 1275
MboI GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
MboII GAAGA 3 cut(s) 537, 939, 981
MfeI CAATTG 1 cut(s) 1220
MflI RGATCY 1 cut(s) 215
MhlI GDGCHC 1 cut(s) 137
MlsI TGGCCA 1 cut(s) 492
MluNI TGGCCA 1 cut(s) 492
MlyI GAGTC 1 cut(s) 296
MmeI TCCRAC 3 cut(s) 372, 1044, 1128
Mox20I TGGCCA 1 cut(s) 492
MroI TCCGGA 1 cut(s) 1042
MscI TGGCCA 1 cut(s) 492
MseI TTAA 6 cut(s) 27, 567, 810, 899, 1173, 1214
MslI CAYNNNNRTG 2 cut(s) 43, 126
Msp20I TGGCCA 1 cut(s) 492
MspCI CTTAAG 1 cut(s) 566
MspI CCGG 2 cut(s) 792, 1043
MspR9I CCNGG 1 cut(s) 1051
MunI CAATTG 1 cut(s) 1220
Mva1269I GAATGC 1 cut(s) 676
MvaI CCWGG 1 cut(s) 1051
MwoI GCNNNNNNNGC 1 cut(s) 636
NdeII GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
NlaIII CATG 6 cut(s) 125, 284, 299, 453, 708, 1085
NmeAIII GCCGAG 1 cut(s) 871
NspI RCATGY 2 cut(s) 453, 708
PciI ACATGT 2 cut(s) 449, 704
PctI GAATGC 1 cut(s) 676
PfeI GAWTC 1 cut(s) 1046
PflMI CCANNNNNTGG 2 cut(s) 212, 1110
PkrI GCNGC 3 cut(s) 147, 323, 356
Ple19I CGATCG 1 cut(s) 14
PleI GAGTC 1 cut(s) 295
PpsI GAGTC 1 cut(s) 295
PscI ACATGT 2 cut(s) 449, 704
Psp6I CCWGG 1 cut(s) 1049
PspGI CCWGG 1 cut(s) 1049
PsuI RGATCY 1 cut(s) 215
PvuI CGATCG 1 cut(s) 14
RsaI GTAC 3 cut(s) 80, 461, 762
RsaNI GTAC 3 cut(s) 79, 460, 761
RseI CAYNNNNRTG 2 cut(s) 43, 126
SaqAI TTAA 6 cut(s) 27, 567, 810, 899, 1173, 1214
SatI GCNGC 3 cut(s) 146, 322, 355
Sau3AI GATC 7 cut(s) 11, 215, 235, 538, 622, 1059, 1273
ScaI AGTACT 1 cut(s) 80
SchI GAGTC 1 cut(s) 296
ScrFI CCNGG 1 cut(s) 1051
SduI GDGCHC 1 cut(s) 137
SfaNI GCATC 2 cut(s) 213, 921
SmiMI CAYNNNNRTG 2 cut(s) 43, 126
SmlI CTYRAG 2 cut(s) 566, 1165
SmoI CTYRAG 2 cut(s) 566, 1165
SsiI CCGC 1 cut(s) 22
SspI AATATT 1 cut(s) 70
SspMI CTAG 2 cut(s) 788, 1160
StyD4I CCNGG 1 cut(s) 1049
TaaI ACNGT 4 cut(s) 83, 254, 652, 688
TaiI ACGT 3 cut(s) 433, 461, 636
TaqI TCGA 2 cut(s) 504, 1308
TatI WGTACW 1 cut(s) 78
TfiI GAWTC 1 cut(s) 1046
Tru1I TTAA 6 cut(s) 27, 567, 810, 899, 1173, 1214
Tru9I TTAA 6 cut(s) 27, 567, 810, 899, 1173, 1214
TseI GCWGC 3 cut(s) 145, 321, 354
TspDTI ATGAA 6 cut(s) 789, 881, 981, 1070, 1088, 1223
TspGWI ACGGA 1 cut(s) 469
Van91I CCANNNNNTGG 2 cut(s) 212, 1110
Vha464I CTTAAG 1 cut(s) 566
XapI RAATTY 5 cut(s) 495, 507, 722, 1117, 1210
XbaI TCTAGA 1 cut(s) 1159
XceI RCATGY 2 cut(s) 453, 708
XspI CTAG 2 cut(s) 788, 1160
ZrmI AGTACT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.