pycom07g09130

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000024
Physical Location & Seq
Reverse (-)
8352960 .. 8355814
2855 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g09130.1

Sequence Viewer

Length: 2802 bp
ATGGGGTTACTTGATATCTCCATCATTCGCATGGTTTCAAAACTAGTACTAGTTTTGTTGTTGTTTCATCATGTGGTTATTGCTACCTCTTCCTACTCTTCGCAGAAGCAGTATCCATCTTGCCCTGATGGGGAGAAGTCCGCCCTGCTGCAATTCAAAGCCAGCTTTACTATTGACAAATCTGCTTCTAGATCTACCGATGCTTATCCAAAGGTTTCATCATGGAAACCAGCTGAAGGAGGAAATAGCACCTGCTGCTCATGGGAAGGTGTCGAGTGTGATGAGAAGACGGGTCATGTGATTGGCCTAGATCTTGGTAGCAGCTGTCTCCACGGCTCTATCAACAGCAATAGCAGCCTCTTCCGCCTTGTTCATCTTCAAAGGTTAAATCTCTCTGACAATAACTTCAATTACTCTCAAATTCCTGCTAGCATTAGGAATTTTCCAAGCCTCACTCATCTTGACCTCTCTACCTCTGTCTTTTCTGGTCAAGTCCCTTCTGAACTTTCACTGTTATCCAAGTTGACATACCTTAATCTAGCTCTCAATCTCGATAGATTGTCAGAAGATAAGGATCATCAGTCGTCAGAAGAGGAGAATTATCCCTTGTTGAAACTTGAAGCATCATCGATCTTGGAAGTATCTTCGGCAATTCCTCATTCCATGGCTAATTTATCATCTTTGACAGCCCTCCACCTCAGGGCCTGTCACCTGTTTGGTGAATTTCCAGTGAGAATTTTCCAACTGCCAAACCTAGAATCTCTTAGTGTGAGATACAACCAAGAATTGACTGGATATTTTCCTGAATTTAATCAAAGCAGTCCTTTCATCTTACTGAAAGTCGGCTTTACTGGCTTTTTTGGAACAATACCCTCTTCAATTCAAAACCTTCATTCACTGCAAAACTTCGATGTGGCTCAAAGCAATTTTTCGGAAGGGTTGGTTCCATCTTTTCTCGGGAATCTTAGGCAGCTCACTTATCTAGACATTTCAGCCAATAAATTTGGAGGTCCAATTCCTGATTCCTTGGCAAACCTTACCCAACTGGCAACTTTTAGGATTAGTACGAGTCGATTAACTGGTCCAATCCCATCTTGGTTAGGCAACTTTAGCAAACTAGAGTACCTAGATTTTGCTTTTAATAGATTAAATGGTTCAGTTCCTGCGTCATTTTCAAATCTCACAAATCTTCAAATCCTTTATCTACAATTGAATAGTCTGAGTGGTGTTGTAGAGTTTCAAATGTTTCAAAATCTACAATTTCTTTTCCAACTTCAATTAAGTTGGAACAGTTTAGAATTTGTCACTGTGAATTCAACAGTTCAACAGTTCACCGTTCTTGGATTGAGTAATTGCAGCCTAACAGAGTTTCCATCCTTCTTACAATATCAGAAGGGGTTGGAGCGTTTGGAAATTGCTGGAAACAAAATCCGAGGCCAAGTACCAAACTGGATGTGGAACACAAGCATAGAAACTTTGGTCTATTTAGACATAAGTGGAAACTTCTTTTCAGGCCAATTTCCGCTTGTCCTTCCTTGGGTGAACCTGGTAGGCATAACGTTTTCGTCCAACATGTTTCATGGATCACTACCGGTACCTCCTCCAACTATGCTAGAATATACAGCTACAGACAACAACTTTACTGGAGAAATCTCATCATTGCTTTGCAATATGAAAAATCTTCAGTTGCTTGACTTGTCGAAAAATAAGTTGAGTGGCATGCTTCCTCAATGTCTCGGAAACTTTAGTGATGATCTGACTCTTTTACTTCTTGGAAACAACTCCTTTCACGGAGTTATTCCTCAGACATACAATAGCGGAAGCAGTTTGAGGATGATTGACGTGAGTCACAACAAATTGCACGGGCAGATACCAAGGTCATTGGTCAATTGTGCGAGGCTTGAGTATCTTGTTTTGTCAAACAATCAATTCAATGATGTTTTTCCCATTTGGTTGGGGACTCTTCAAGAGTTAAAACTTTTGGCAATGCGCCATAATAGATTCTACGGTGTGATTGGAAAATCTAGAAAGAATGTCGATTTCCCCAAGTTACGCATTCTTGATTTGTCTCACAATAATTTTACTGGCGCCGTTCCATCTATGTTTCCAAGTATTATTGTTAACAAGTCAGCATATATGTTCACAGACGTAGCTTATGATGCCAGTGGAGCCAGGATTATTAGATATGCTGGTTACGCACTCACACTAGCAACAAAAGGTTTGGAGCAATACTATCCAATGATTCGAGAAGAATTTGCATCCTTTGATATCTCCAGCAACAAATTTGAAGGGGAAATTCCAGACTTCATTGGGAAGCTTAAGGAGCTTCGTTCGCTGAATCTTTCCCACAACATTCTCACTGGTTCTATACCATCATCCTTCGGAAACTTGACGAAGCTTGAATCGTTGGACCTTTCACAAAACAAGCTCTCAGGACAGATCGCCCAACAACTGAGGCAACTTAATTTTCTTGGCAGTTTCAATGTGTCTCACAACAATCTCACAGGTCCTATACCACAAGGAACGCAGCTTACTTCATTGAATATCACTTCATACGAGGGAAACCCAGGGTTGTGTGGAGATCCATTGCCAAAGAAATGTGGAAAGTCTAAGGCCCCTCAACGTCCACCATCAACCGTAGACGATGGTGATTCTAGCTCAGCGGGAATATTTGAATTTGATTGGAAAATTGTTTCGGCCGGATGTGGAAGTGGGTTGATTGTGGGAGTAGTTCTTGCAGATGTTGTGATCACAAGGAGGCCCGATATGTTTCTTAAGATTGTTGGAATGATCAGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

934

Amino Acids

103.19

Weight (kDa)

6.45

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 43 - 94 2.9e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 294 - 499 1.9e-12 Leucine-rich repeat region
LRR_8 PF13855 348 - 407 7e-07 Leucine rich repeat
LRR_8 PF13855 586 - 644 9.9e-09 Leucine rich repeat
LRR_8 PF13855 755 - 810 4.8e-08 Leucine rich repeat
LRR_14 PF23598 764 - 850 8e-06 Leucine-rich repeat region
LRR_8 PF13855 775 - 834 2.2e-07 Leucine rich repeat
LRR_4 PF12799 775 - 811 3.5e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 260
Acc36I ACCTGC 1 cut(s) 260
Acc65I GGTACC 1 cut(s) 1594
AccB1I GGYRCC 2 cut(s) 1594, 2087
AccI GTMKAC 1 cut(s) 2640
AciI CCGC 5 cut(s) 141, 364, 1523, 1818, 2663
AclI AACGTT 1 cut(s) 1559
AclWI GGATC 3 cut(s) 582, 1591, 2576
AcoI YGGCCR 1 cut(s) 2697
AcuI CTGAAG 2 cut(s) 255, 1667
AcyI GRCGYC 1 cut(s) 2088
AfaI GTAC 5 cut(s) 48, 1066, 1124, 1443, 1596
AfiI CCNNNNNNNGG 4 cut(s) 130, 236, 700, 1537
AflII CTTAAG 2 cut(s) 2318, 2774
AflIII ACRYGT 1 cut(s) 1572
AgeI ACCGGT 1 cut(s) 1591
AhlI ACTAGT 2 cut(s) 43, 49
AjiI CACGTC 1 cut(s) 1843
AjnI CCWGG 3 cut(s) 1545, 2171, 2566
AjuI GAANNNNNNNTTGG 2 cut(s) 1006, 1038
Alw26I GTCTC 4 cut(s) 332, 1739, 2073, 2493
AlwI GGATC 3 cut(s) 582, 1591, 2576
AlwNI CAGNNNCTG 2 cut(s) 705, 1163
Ama87I CYCGRG 1 cut(s) 956
AoxI GGCC 7 cut(s) 304, 702, 1435, 1513, 2613, 2697, 2759
ApeKI GCWGC 7 cut(s) 148, 255, 321, 354, 970, 1356, 2527
AsiGI ACCGGT 1 cut(s) 1591
Asp718I GGTACC 1 cut(s) 1594
AspLEI GCGC 2 cut(s) 1992, 2090
AspS9I GGNCC 7 cut(s) 702, 1010, 1082, 2410, 2507, 2614, 2760
AsuHPI GGTGA 5 cut(s) 701, 731, 1324, 1552, 2660
AsuNHI GCTAGC 1 cut(s) 428
AvaI CYCGRG 1 cut(s) 956
AvaII GGWCC 4 cut(s) 1010, 1082, 2410, 2507
AxyI CCTNAGG 1 cut(s) 698
BaeI ACNNNNGTAYC 4 cut(s) 1106, 1139, 1862, 1895
BanI GGYRCC 2 cut(s) 1594, 2087
BbsI GAAGAC 1 cut(s) 293
BbvI GCAGC 7 cut(s) 135, 242, 333, 366, 982, 1368, 2539
BceAI ACGGC 2 cut(s) 349, 2075
BciT130I CCWGG 3 cut(s) 1547, 2173, 2568
BciVI GTATCC 1 cut(s) 123
BclI TGATCA 2 cut(s) 2748, 2790
BcoDI GTCTC 4 cut(s) 332, 1739, 2073, 2493
BcuI ACTAGT 2 cut(s) 43, 49
BfmI CTRYAG 1 cut(s) 1626
BfoI RGCGCY 1 cut(s) 2091
BfrI CTTAAG 2 cut(s) 2318, 2774
BfuAI ACCTGC 1 cut(s) 260
BfuI GTATCC 1 cut(s) 123
BglII AGATCT 2 cut(s) 191, 310
BisI GCNGC 7 cut(s) 149, 256, 322, 355, 971, 1357, 2528
BlpI GCTNAGC 1 cut(s) 2659
BlsI GCNGC 7 cut(s) 150, 257, 323, 356, 972, 1358, 2529
BmcAI AGTACT 1 cut(s) 48
Bme1390I CCNGG 3 cut(s) 1547, 2173, 2568
Bme18I GGWCC 4 cut(s) 1010, 1082, 2410, 2507
BmeT110I CYCGRG 1 cut(s) 956
BmgBI CACGTC 1 cut(s) 1843
BmgT120I GGNCC 7 cut(s) 702, 1010, 1082, 2410, 2507, 2614, 2760
BmiI GGNNCC 5 cut(s) 945, 1596, 2089, 2170, 2616
BmrFI CCNGG 3 cut(s) 1547, 2173, 2568
BmsI GCATC 4 cut(s) 190, 632, 2149, 2267
BmtI GCTAGC 1 cut(s) 432
BoxI GACNNNNGTC 1 cut(s) 1845
BpiI GAAGAC 1 cut(s) 293
BpmI CTGGAG 2 cut(s) 1665, 2257
Bpu1102I GCTNAGC 1 cut(s) 2659
BpuEI CTTGAG 1 cut(s) 1922
Bsa29I ATCGAT 1 cut(s) 629
BsaBI GATNNNNATC 2 cut(s) 204, 573
BsaHI GRCGYC 1 cut(s) 2088
BsaJI CCNNGG 8 cut(s) 331, 663, 1026, 1432, 1535, 1874, 2566, 2567
BsaWI WCCGGW 1 cut(s) 1591
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 236, 700, 1537
Bse118I RCCGGY 1 cut(s) 1591
Bse21I CCTNAGG 1 cut(s) 698
Bse3DI GCAATG 3 cut(s) 1658, 1992, 2585
Bse8I GATNNNNATC 2 cut(s) 204, 573
BseBI CCWGG 3 cut(s) 1547, 2173, 2568
BseCI ATCGAT 1 cut(s) 629
BseDI CCNNGG 8 cut(s) 331, 663, 1026, 1432, 1535, 1874, 2566, 2567
BseGI GGATG 6 cut(s) 1373, 1458, 1839, 2258, 2375, 2708
BseJI GATNNNNATC 2 cut(s) 204, 573
BseLI CCNNNNNNNGG 4 cut(s) 130, 236, 700, 1537
BseMI GCAATG 3 cut(s) 1658, 1992, 2585
BseMII CTCAG 6 cut(s) 712, 1211, 1817, 2444, 2445, 2673
BseRI GAGGAG 2 cut(s) 608, 1590
BseX3I CGGCCG 1 cut(s) 2697
BseXI GCAGC 7 cut(s) 135, 242, 333, 366, 982, 1368, 2539
Bsh1285I CGRYCG 1 cut(s) 2700
BshFI GGCC 7 cut(s) 306, 704, 1437, 1515, 2615, 2699, 2761
BshNI GGYRCC 2 cut(s) 1594, 2087
BshTI ACCGGT 1 cut(s) 1591
BshVI ATCGAT 1 cut(s) 629
BsiEI CGRYCG 1 cut(s) 2700
BsiHKCI CYCGRG 1 cut(s) 956
BsiSI CCGG 2 cut(s) 1592, 2700
BslFI GGGAC 2 cut(s) 479, 1972
BslI CCNNNNNNNGG 4 cut(s) 130, 236, 700, 1537
BsmAI GTCTC 4 cut(s) 332, 1739, 2073, 2493
BsmFI GGGAC 2 cut(s) 479, 1972
BsmI GAATGC 1 cut(s) 2055
BsnI GGCC 7 cut(s) 306, 704, 1437, 1515, 2615, 2699, 2761
BsoBI CYCGRG 1 cut(s) 956
Bsp1720I GCTNAGC 1 cut(s) 2659
Bsp19I CCATGG 1 cut(s) 663
BspACI CCGC 5 cut(s) 141, 364, 1523, 1818, 2663
BspANI GGCC 7 cut(s) 306, 704, 1437, 1515, 2615, 2699, 2761
BspCNI CTCAG 6 cut(s) 711, 1212, 1816, 2444, 2445, 2672
BspDI ATCGAT 1 cut(s) 629
BspLI GGNNCC 5 cut(s) 945, 1596, 2089, 2170, 2616
BspMI ACCTGC 1 cut(s) 260
BspOI GCTAGC 1 cut(s) 432
BspPI GGATC 3 cut(s) 582, 1591, 2576
BspT107I GGYRCC 2 cut(s) 1594, 2087
BspTI CTTAAG 2 cut(s) 2318, 2774
BsrDI GCAATG 3 cut(s) 1658, 1992, 2585
BsrFI RCCGGY 1 cut(s) 1591
BssAI RCCGGY 1 cut(s) 1591
BssECI CCNNGG 8 cut(s) 331, 663, 1026, 1432, 1535, 1874, 2566, 2567
BssNI GRCGYC 1 cut(s) 2088
BssT1I CCWWGG 4 cut(s) 663, 1026, 1535, 1874
Bst2UI CCWGG 3 cut(s) 1547, 2173, 2568
Bst4CI ACNGT 8 cut(s) 513, 1292, 1309, 1321, 1329, 1336, 2009, 2638
Bst6I CTCTTC 6 cut(s) 94, 103, 365, 585, 880, 1968
BstACI GRCGYC 1 cut(s) 2088
BstAFI CTTAAG 2 cut(s) 2318, 2774
BstAPI GCANNNNNTGC 1 cut(s) 255
BstC8I GCNNGC 3 cut(s) 163, 430, 1721
BstDEI CTNAG 9 cut(s) 698, 764, 965, 1220, 1803, 2431, 2453, 2610, 2659
BstDSI CCRYGG 2 cut(s) 331, 663
BstF5I GGATG 6 cut(s) 1373, 1458, 1839, 2258, 2375, 2708
BstH2I RGCGCY 1 cut(s) 2091
BstHHI GCGC 2 cut(s) 1992, 2090
BstMAI GTCTC 4 cut(s) 332, 1739, 2073, 2493
BstMCI CGRYCG 1 cut(s) 2700
BstNI CCWGG 3 cut(s) 1547, 2173, 2568
BstNSI RCATGY 2 cut(s) 1576, 1723
BstPAI GACNNNNGTC 1 cut(s) 1845
BstSCI CCNGG 3 cut(s) 1545, 2171, 2566
BstSFI CTRYAG 1 cut(s) 1626
BstV1I GCAGC 7 cut(s) 135, 242, 333, 366, 982, 1368, 2539
BstV2I GAAGAC 1 cut(s) 293
BstX2I RGATCY 3 cut(s) 191, 310, 2581
BstXI CCANNNNNNTGG 1 cut(s) 1954
BstYI RGATCY 3 cut(s) 191, 310, 2581
BstZI CGGCCG 1 cut(s) 2697
Bsu15I ATCGAT 1 cut(s) 629
Bsu36I CCTNAGG 1 cut(s) 698
BsuI GTATCC 1 cut(s) 123
BsuRI GGCC 7 cut(s) 306, 704, 1437, 1515, 2615, 2699, 2761
BsuTUI ATCGAT 1 cut(s) 629
BtgI CCRYGG 2 cut(s) 331, 663
BtrI CACGTC 1 cut(s) 1843
BtsCI GGATG 6 cut(s) 1373, 1458, 1839, 2258, 2375, 2708
BtsI GCAGTG 1 cut(s) 896
BtsIMutI CAGTG 6 cut(s) 509, 735, 896, 1305, 2170, 2358
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 3 cut(s) 163, 430, 1721
CaiI CAGNNNCTG 2 cut(s) 705, 1163
CfoI GCGC 2 cut(s) 1992, 2090
Cfr10I RCCGGY 1 cut(s) 1591
Cfr13I GGNCC 7 cut(s) 702, 1010, 1082, 2410, 2507, 2614, 2760
ClaI ATCGAT 1 cut(s) 629
CseI GACGC 1 cut(s) 1155
CsiI ACCWGGT 1 cut(s) 1545
Csp6I GTAC 5 cut(s) 47, 1065, 1123, 1442, 1595
CspAI ACCGGT 1 cut(s) 1591
CviAII CATG 9 cut(s) 31, 71, 222, 261, 296, 664, 1573, 1580, 1720
CviQI GTAC 5 cut(s) 47, 1065, 1123, 1442, 1595
DdeI CTNAG 9 cut(s) 698, 764, 965, 1220, 1803, 2431, 2453, 2610, 2659
DinI GGCGCC 1 cut(s) 2089
EaeI YGGCCR 1 cut(s) 2697
EagI CGGCCG 1 cut(s) 2697
Eam1104I CTCTTC 6 cut(s) 94, 103, 365, 585, 880, 1968
EarI CTCTTC 6 cut(s) 94, 103, 365, 585, 880, 1968
EciI GGCGGA 2 cut(s) 130, 353
EclXI CGGCCG 1 cut(s) 2697
Eco130I CCWWGG 4 cut(s) 663, 1026, 1535, 1874
Eco32I GATATC 2 cut(s) 16, 2269
Eco47I GGWCC 4 cut(s) 1010, 1082, 2410, 2507
Eco52I CGGCCG 1 cut(s) 2697
Eco57I CTGAAG 2 cut(s) 255, 1667
Eco81I CCTNAGG 1 cut(s) 698
Eco88I CYCGRG 1 cut(s) 956
EcoO109I RGGNCCY 3 cut(s) 702, 2507, 2614
EcoRI GAATTC 1 cut(s) 1312
EcoRII CCWGG 3 cut(s) 1545, 2171, 2566
EcoRV GATATC 2 cut(s) 16, 2269
EcoT14I CCWWGG 4 cut(s) 663, 1026, 1535, 1874
EgeI GGCGCC 1 cut(s) 2089
EheI GGCGCC 1 cut(s) 2089
ErhI CCWWGG 4 cut(s) 663, 1026, 1535, 1874
FaeI CATG 9 cut(s) 34, 74, 225, 264, 299, 667, 1576, 1583, 1723
FalI AAGNNNNNCTT 2 cut(s) 808, 840
FaqI GGGAC 2 cut(s) 479, 1972
FatI CATG 9 cut(s) 30, 70, 221, 260, 295, 663, 1572, 1579, 1719
FauI CCCGC 1 cut(s) 2656
FbaI TGATCA 2 cut(s) 2748, 2790
FblI GTMKAC 1 cut(s) 2640
Fnu4HI GCNGC 7 cut(s) 149, 256, 322, 355, 971, 1357, 2528
FokI GGATG 6 cut(s) 1360, 1465, 1846, 2245, 2362, 2715
Fsp4HI GCNGC 7 cut(s) 149, 256, 322, 355, 971, 1357, 2528
GlaI GCGC 2 cut(s) 1991, 2089
GluI GCNGC 7 cut(s) 149, 256, 322, 355, 971, 1357, 2528
GsuI CTGGAG 2 cut(s) 1665, 2257
HaeII RGCGCY 1 cut(s) 2091
HaeIII GGCC 7 cut(s) 306, 704, 1437, 1515, 2615, 2699, 2761
HapII CCGG 2 cut(s) 1592, 2700
HgaI GACGC 1 cut(s) 1155
HhaI GCGC 2 cut(s) 1992, 2090
Hin1I GRCGYC 1 cut(s) 2088
Hin1II CATG 9 cut(s) 34, 74, 225, 264, 299, 667, 1576, 1583, 1723
Hin6I GCGC 2 cut(s) 1990, 2088
HinP1I GCGC 2 cut(s) 1990, 2088
HincII GTYRAC 2 cut(s) 525, 2122
HindII GTYRAC 2 cut(s) 525, 2122
HindIII AAGCTT 2 cut(s) 2315, 2396
HpaI GTTAAC 1 cut(s) 2122
HpaII CCGG 2 cut(s) 1592, 2700
HphI GGTGA 5 cut(s) 701, 731, 1324, 1552, 2660
Hpy166II GTNNAC 7 cut(s) 525, 1332, 1543, 2122, 2142, 2627, 2641
Hpy8I GTNNAC 7 cut(s) 525, 1332, 1543, 2122, 2142, 2627, 2641
HpyCH4III ACNGT 8 cut(s) 513, 1292, 1309, 1321, 1329, 1336, 2009, 2638
HpyCH4IV ACGT 4 cut(s) 1559, 1842, 2148, 2623
HpyCH4V TGCA 7 cut(s) 151, 901, 1356, 1668, 1861, 2258, 2738
HpyF3I CTNAG 9 cut(s) 698, 764, 965, 1220, 1803, 2431, 2453, 2610, 2659
HpySE526I ACGT 4 cut(s) 1559, 1842, 2148, 2623
Hsp92I GRCGYC 1 cut(s) 2088
Hsp92II CATG 9 cut(s) 34, 74, 225, 264, 299, 667, 1576, 1583, 1723
HspAI GCGC 2 cut(s) 1990, 2088
KasI GGCGCC 1 cut(s) 2087
KpnI GGTACC 1 cut(s) 1598
Ksp22I TGATCA 2 cut(s) 2748, 2790
KspAI GTTAAC 1 cut(s) 2122
LmnI GCTCC 4 cut(s) 1402, 2168, 2224, 2323
Lsp1109I GCAGC 7 cut(s) 135, 242, 333, 366, 982, 1368, 2539
LweI GCATC 4 cut(s) 190, 632, 2149, 2267
MabI ACCWGGT 1 cut(s) 1545
MaeII ACGT 4 cut(s) 1559, 1842, 2148, 2623
MaeIII GTNAC 6 cut(s) 6, 707, 1303, 1847, 2049, 2192
MfeI CAATTG 2 cut(s) 1208, 1888
MflI RGATCY 3 cut(s) 191, 310, 2581
Mly113I GGCGCC 1 cut(s) 2088
MlyI GAGTC 4 cut(s) 1078, 1753, 1855, 1954
MmeI TCCRAC 8 cut(s) 766, 1265, 1294, 1380, 1593, 1628, 2388, 2764
MslI CAYNNNNRTG 1 cut(s) 29
MspA1I CMGCKG 3 cut(s) 233, 324, 2663
MspCI CTTAAG 2 cut(s) 2318, 2774
MspI CCGG 2 cut(s) 1592, 2700
MspR9I CCNGG 3 cut(s) 1547, 2173, 2568
MunI CAATTG 2 cut(s) 1208, 1888
Mva1269I GAATGC 1 cut(s) 2055
MvaI CCWGG 3 cut(s) 1547, 2173, 2568
NarI GGCGCC 1 cut(s) 2088
NcoI CCATGG 1 cut(s) 663
NheI GCTAGC 1 cut(s) 428
NlaIII CATG 9 cut(s) 34, 74, 225, 264, 299, 667, 1576, 1583, 1723
NlaIV GGNNCC 5 cut(s) 945, 1596, 2089, 2170, 2616
NmuCI GTSAC 3 cut(s) 707, 1303, 1847
NspI RCATGY 2 cut(s) 1576, 1723
PaeI GCATGC 1 cut(s) 1723
PaqCI CACCTGC 1 cut(s) 260
PasI CCCWGGG 1 cut(s) 2567
PciI ACATGT 1 cut(s) 1572
PctI GAATGC 1 cut(s) 2055
PfeI GAWTC 8 cut(s) 758, 961, 1022, 2001, 2242, 2338, 2402, 2651
PinAI ACCGGT 1 cut(s) 1591
PkrI GCNGC 7 cut(s) 150, 257, 323, 356, 972, 1358, 2529
PleI GAGTC 4 cut(s) 1077, 1753, 1854, 1954
PluTI GGCGCC 1 cut(s) 2091
PpsI GAGTC 4 cut(s) 1077, 1753, 1854, 1954
PpuMI RGGWCCY 1 cut(s) 2507
PscI ACATGT 1 cut(s) 1572
PshAI GACNNNNGTC 1 cut(s) 1845
Psp1406I AACGTT 1 cut(s) 1559
Psp5II RGGWCCY 1 cut(s) 2507
Psp6I CCWGG 3 cut(s) 1545, 2171, 2566
PspGI CCWGG 3 cut(s) 1545, 2171, 2566
PspN4I GGNNCC 5 cut(s) 945, 1596, 2089, 2170, 2616
PspPI GGNCC 7 cut(s) 702, 1010, 1082, 2410, 2507, 2614, 2760
PspPPI RGGWCCY 1 cut(s) 2507
PsrI GAACNNNNNNTAC 2 cut(s) 2515, 2547
PstNI CAGNNNCTG 2 cut(s) 705, 1163
PsuI RGATCY 3 cut(s) 191, 310, 2581
PvuII CAGCTG 2 cut(s) 233, 324
RsaI GTAC 5 cut(s) 48, 1066, 1124, 1443, 1596
RsaNI GTAC 5 cut(s) 47, 1065, 1123, 1442, 1595
RseI CAYNNNNRTG 1 cut(s) 29
SatI GCNGC 7 cut(s) 149, 256, 322, 355, 971, 1357, 2528
Sau96I GGNCC 7 cut(s) 702, 1010, 1082, 2410, 2507, 2614, 2760
ScaI AGTACT 1 cut(s) 48
SchI GAGTC 4 cut(s) 1078, 1753, 1855, 1954
ScrFI CCNGG 3 cut(s) 1547, 2173, 2568
SexAI ACCWGGT 1 cut(s) 1545
SfaNI GCATC 4 cut(s) 190, 632, 2149, 2267
SfcI CTRYAG 1 cut(s) 1626
SfoI GGCGCC 1 cut(s) 2089
SinI GGWCC 4 cut(s) 1010, 1082, 2410, 2507
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 3 cut(s) 1901, 2318, 2774
SmoI CTYRAG 3 cut(s) 1901, 2318, 2774
SpeI ACTAGT 2 cut(s) 43, 49
SphI GCATGC 1 cut(s) 1723
SsiI CCGC 5 cut(s) 141, 364, 1523, 1818, 2663
SspDI GGCGCC 1 cut(s) 2087
SspI AATATT 1 cut(s) 2670
StyD4I CCNGG 3 cut(s) 1545, 2171, 2566
StyI CCWWGG 4 cut(s) 663, 1026, 1535, 1874
TaaI ACNGT 8 cut(s) 513, 1292, 1309, 1321, 1329, 1336, 2009, 2638
TaiI ACGT 4 cut(s) 1562, 1845, 2151, 2626
TaqI TCGA 8 cut(s) 273, 552, 629, 909, 1072, 1700, 2037, 2245
TatI WGTACW 1 cut(s) 46
TfiI GAWTC 8 cut(s) 758, 961, 1022, 2001, 2242, 2338, 2402, 2651
TscAI CASTG 6 cut(s) 516, 735, 903, 1312, 2170, 2365
TseFI GTSAC 3 cut(s) 707, 1303, 1847
TseI GCWGC 7 cut(s) 148, 255, 321, 354, 970, 1356, 2527
Tsp45I GTSAC 3 cut(s) 707, 1303, 1847
TspGWI ACGGA 1 cut(s) 1806
TspRI CASTG 6 cut(s) 516, 735, 903, 1312, 2170, 2365
Vha464I CTTAAG 2 cut(s) 2318, 2774
VpaK11BI GGWCC 4 cut(s) 1010, 1082, 2410, 2507
XbaI TCTAGA 3 cut(s) 188, 982, 2024
XceI RCATGY 2 cut(s) 1576, 1723
XcmI CCANNNNNNNNNTGG 4 cut(s) 28, 788, 1092, 1452
XmiI GTMKAC 1 cut(s) 2640
ZrmI AGTACT 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.