RchiOBHm_Chr6g0263411

receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000024
Physical Location & Seq
Reverse (-)
18237368 .. 18240172
2805 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23625

Sequence Viewer

Length: 2805 bp
ATGGGGTTATCATCTCTATGTTTAGCATTTGCGTCCATTTTTATCCTTTCAAAACTTGTGTTGATCTATCTTGCGGCAGCCGATTCTTTGCAGTCATATATTCCTACTTGCCATGATGCCGAGAACGCTGCCTTGCTACAATTCAAGCAAAGCTTTGTCATTAACATTTCTGCTTCACAGTATCATGGTGCTTATCCAAAAACTTCTTCATGGAAATCAGCAGGGAATCAAAACAACAGTTGTTGCTCATGGGATGGAGTCGAGTGTGATGAGAATACAGGTCATGTGATTGGTCTTGATCTTAGTAGCAGTCGTCTCTATGGCTCTTTCAGCTCCAACAACACCTTATTCAGTCTTGTTCATCTTCAGAGTCTGAACCTTGCTGATAATAACTTCATTTACTCTCAAATTCCTATCAGCATTAGGAACTTTCCAAAGCTCAGGTATCTCAATCTCTCTCGCGCTTACTTTTCTGGTCGAGTCCCATCTCAAGTTTCACAATTGACCAAGTTGTCATACCTTGATCTATCTAGCACTGATGGTGATATGTCTGGAAATGGTGGGATGTTTGAAAATGGTGGGATGTTCTCCAACAATGAATTGTTGGGAAACCTAGCTCAAAACTTAACCGGCTTAGAAAAACTTCATCTTTCTTGGATTAGAATATCATCCACAGTACCCAACACCTTGGCAAATTTGTCAAATTTGGCCTCCCTCCTCCTTAATGGTTGTGACCTGTTTGGCAAATTCCCAACAGGAATTTTTAAATTACAAAATTTGAAAGTTCTTATTGCAAGCTCCAACTCTCTCGCGGGTCAATTAGACTTTCCAAATAACAAATTTATAGGCCAAATTCCTGCTTCATTTGCAAATCTTACCAAACTCACATATTTGTCACTTTCAGATAATAATATTAGTGGCACAATCCCATGTTCTTTTGGAAATCTTACCCAGCTCACAACACTCCATCTTCGTTCAAATCACTTGTCTGGTCCAATCCCATCTAGTCTGGGTAATCTTGGCAAACTTACTGATCTAGATCTTAGTTTCAATAAATTTCGGAGAGAAATTCCTGAGTCATTATCCAGTGTAGCAAGTCTCAAGAGACTTAATCTAGCTGGTAATAATCTGAGCGGTACAGTGGAGTTCCTCAAATTTCTTAAACTACCAAATCTAAAATTGGTAGATCTATCCGATAACAACTTGGATTTGATCACTGAAACCAGAACTATGAATGCATCCAGCATTTCAAGGTTAGAGTATTTACGATTGGGTTCATGCAACATAAGAGAGTTCCCAAATTTCCTGAGATATCAAGATACATTAATCTACTTAAACCTTTCTTGGAACGGAATCCATGGCCCAGTACCGAAATGGATGTGGAACATAAGCAGAGAGTCTTTGGAGTACATGGACATTTCTCATAACCTCCTTTCAGGCTTCGACCAACCTCCGGCTGTCCTTCCCTGGGTTTTATTGCTGGGGCTAGATCTTTCGTTCAACAACCTTAATGGGCCATTGTTGGTAGCTTCACAACACACATTATTCTATGACATTTCAAACAACAATCTAACTGGAGAAATTTCGCCATTGATTTGCAATATGAATTTTCTTCGTTCCCTTGATTTGTCAAATAATAGGTTGAGTGGCATGCTTCCGCATTGTTTCAACAACTTCACTTATCTTGAAGGTTTAAGCGTTGGAAACAACCTTTTTCATGGAACTCTTCCTCAAGTATGCACCACCAACCGAAGCAGTTTGAAAATGATGGATGCTAGTCGTAACCAATTACTGGGGAAACTACCGAGGTCATTGGCGAATTGTTTGACACTCGAGTCTCTTGTTCTATCAAGCAACAAGTTCGATGATGTTTTCCCCACTTGGTTGGGAATTCTACCAGAGCTAAAAGTTTTGGCAATGAAGAATAGTGGGTTCCACGGTGCTATTCGGAGACCTCCGAGCAATCATGGTTTCCCCGATTTGCGCATCCTTGATCTGTCTCAGAATAATTTTACCGGTCAGTTTCCTTCTGAATTCATTTTCTCTGGAATTTCTATGGGACGAGGTATTAATAGCAAGTCGGCGTATATGAGTGCAAATAATTTTTATGTGATTAGTTCACGAGCAAATGAATATGGTGAAAGGTATGACATGACTTTCCACAAATTTGTGTACTCAGTCACGTTGATAAATAAAGGTTTAGAGAGATACTTCCCAAAGATTTATGAAGACTTTATGGCCATTGATCTATCGAGCAACAGATTTGAAGGCAGGATTCCAGAACTTATTGGGAACCTAAAGGGACTACGCTCGCTTAATGTTTCCAATAACATGCTAACTGGTCGCATCCCACCATCCTTGGGAAACTTAAAAAATCTTGAAGCTTTGGACCTTTCACAGAACAAGTTGTCAGGTGAGATCCCTCAAGTACTGTTGCAGCTTTCATTCCTCGAACAATTCAATGTCTCGCACAACAATCTCACAGGTCGTATACTCCATGGAAACCAGTTTAGTACCTTTGAAAACACTTCATATGAGGGAAACCCTGGTCTGTGTGGAGATCCATTGCCAAAGAAATGTGCACGTCCTGAAGGGAATAAACTTCCACCTTCAACAGCCGAAGAAAATGGCTCGAGCACTGGAGTTGAATTAGAGTGGAAATTTGCTGCGGCGGGGTTAGTCAGTGGCTTGGTGGTGGGAGTGGTTCTTGCAGATTTTGTGATCACCAGGTGGAGTGACCGGTTCATTGAGATAGTTGCGTTACTGATCAGACTATTGAGAAGGATGAGAGGGCCCAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

934

Amino Acids

103.33

Weight (kDa)

8.38

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 90 1.8e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 286 - 329 3.6e-08 Leucine rich repeat
LRR_14 PF23598 289 - 474 5.4e-11 Leucine-rich repeat region
LRR_8 PF13855 318 - 377 7.2e-08 Leucine rich repeat
LRR_8 PF13855 747 - 803 9.4e-07 Leucine rich repeat
LRR_4 PF12799 768 - 804 8.7e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 511, 1834
Acc16I TGCGCA 1 cut(s) 1985
AccB7I CCANNNNNTGG 1 cut(s) 1792
AccBSI CCGCTC 1 cut(s) 1134
AccI GTMKAC 1 cut(s) 2491
AccII CGCG 2 cut(s) 462, 812
AciI CCGC 6 cut(s) 74, 812, 1134, 1658, 2669, 2672
AclWI GGATC 2 cut(s) 2413, 2555
AcoI YGGCCR 1 cut(s) 2238
AcuI CTGAAG 2 cut(s) 350, 2610
AdeI CACNNNGTG 1 cut(s) 2730
AfaI GTAC 7 cut(s) 678, 1138, 1368, 1409, 2174, 2430, 2515
AfiI CCNNNNNNNGG 4 cut(s) 1453, 1468, 1792, 2360
AgeI ACCGGT 2 cut(s) 2015, 2739
AjiI CACGTC 1 cut(s) 2585
AjnI CCWGG 3 cut(s) 1466, 2545, 2726
AjuI GAANNNNNNNTTGG 2 cut(s) 190, 222
Alw21I GWGCWC 2 cut(s) 2584, 2639
Alw26I GTCTC 7 cut(s) 320, 1099, 1103, 1842, 1945, 2004, 2470
Alw44I GTGCAC 1 cut(s) 2580
AlwI GGATC 2 cut(s) 2413, 2555
AlwNI CAGNNNCTG 1 cut(s) 373
Ama87I CYCGRG 2 cut(s) 1832, 2632
AoxI GGCC 6 cut(s) 708, 847, 1360, 1514, 2238, 2792
ApaI GGGCCC 1 cut(s) 2796
ApaLI GTGCAC 1 cut(s) 2580
ApeKI GCWGC 4 cut(s) 77, 128, 2437, 2666
ArsI GACNNNNNNTTYG 2 cut(s) 971, 1003
AseI ATTAAT 2 cut(s) 1325, 2070
AsiGI ACCGGT 2 cut(s) 2015, 2739
Asp700I GAANNNNTTC 1 cut(s) 642
AspLEI GCGC 2 cut(s) 464, 1986
AspS9I GGNCC 6 cut(s) 992, 1361, 1514, 2389, 2792, 2793
AsuHPI GGTGA 4 cut(s) 554, 2150, 2426, 2716
AvaI CYCGRG 2 cut(s) 1832, 2632
AvaII GGWCC 2 cut(s) 992, 2389
BaeGI GKGCMC 2 cut(s) 2584, 2796
BalI TGGCCA 1 cut(s) 2240
BanII GRGCYC 1 cut(s) 2796
BauI CACGAG 1 cut(s) 2121
BbsI GAAGAC 1 cut(s) 2235
Bbv12I GWGCWC 2 cut(s) 2584, 2639
BbvI GCAGC 4 cut(s) 89, 115, 2449, 2653
BccI CCATC 7 cut(s) 248, 493, 533, 975, 1009, 1762, 2362
BcgI CGANNNNNNTGC 4 cut(s) 110, 144, 1843, 1877
BciT130I CCWGG 3 cut(s) 1468, 2547, 2728
BclI TGATCA 3 cut(s) 1212, 2721, 2766
BcoDI GTCTC 7 cut(s) 320, 1099, 1103, 1842, 1945, 2004, 2470
BfaI CTAG 7 cut(s) 531, 614, 1005, 1037, 1115, 1487, 1776
BglII AGATCT 3 cut(s) 1039, 1186, 1489
BisI GCNGC 6 cut(s) 75, 78, 129, 2438, 2667, 2670
BlsI GCNGC 6 cut(s) 76, 79, 130, 2439, 2668, 2671
BmcAI AGTACT 1 cut(s) 2430
Bme1390I CCNGG 3 cut(s) 1468, 2547, 2728
Bme18I GGWCC 2 cut(s) 992, 2389
BmeT110I CYCGRG 2 cut(s) 1832, 2632
BmgBI CACGTC 1 cut(s) 2585
BmgT120I GGNCC 6 cut(s) 992, 1361, 1514, 2389, 2792, 2793
BmiI GGNNCC 3 cut(s) 1934, 2294, 2794
BmrFI CCNGG 3 cut(s) 1468, 2547, 2728
BmrI ACTGGG 2 cut(s) 1358, 1802
BmsI GCATC 5 cut(s) 106, 1247, 1762, 1995, 2355
BmuI ACTGGG 2 cut(s) 1358, 1802
BpiI GAAGAC 1 cut(s) 2235
BpmI CTGGAG 2 cut(s) 1596, 2661
Bpu10I CCTNAGC 1 cut(s) 440
BpuEI CTTGAG 4 cut(s) 474, 1085, 1716, 2409
BsaBI GATNNNNATC 1 cut(s) 1038
BsaI GGTCTC 1 cut(s) 1945
BsaJI CCNNGG 9 cut(s) 687, 1357, 1466, 1467, 1805, 1936, 2358, 2497, 2545
BsaWI WCCGGW 2 cut(s) 2015, 2739
Bsc4I CCNNNNNNNGG 4 cut(s) 1453, 1468, 1792, 2360
Bse118I RCCGGY 3 cut(s) 629, 2015, 2739
Bse1I ACTGG 7 cut(s) 1086, 1364, 1579, 1797, 2344, 2506, 2644
Bse3DI GCAATG 2 cut(s) 1923, 2564
Bse8I GATNNNNATC 1 cut(s) 1038
BseBI CCWGG 3 cut(s) 1468, 2547, 2728
BseDI CCNNGG 9 cut(s) 687, 1357, 1466, 1467, 1805, 1936, 2358, 2497, 2545
BseJI GATNNNNATC 1 cut(s) 1038
BseLI CCNNNNNNNGG 4 cut(s) 1453, 1468, 1792, 2360
BseMI GCAATG 2 cut(s) 1923, 2564
BseMII CTCAG 6 cut(s) 454, 1065, 1121, 1298, 2015, 2190
BseNI ACTGG 7 cut(s) 1086, 1364, 1579, 1797, 2344, 2506, 2644
BseRI GAGGAG 1 cut(s) 707
BseSI GKGCMC 2 cut(s) 2584, 2796
BseXI GCAGC 4 cut(s) 89, 115, 2449, 2653
BseYI CCCAGC 2 cut(s) 951, 1480
Bsh1236I CGCG 2 cut(s) 462, 812
BshFI GGCC 6 cut(s) 710, 849, 1362, 1516, 2240, 2794
BshTI ACCGGT 2 cut(s) 2015, 2739
BsiHKAI GWGCWC 2 cut(s) 2584, 2639
BsiHKCI CYCGRG 2 cut(s) 1832, 2632
BsiSI CCGG 4 cut(s) 630, 1454, 2016, 2740
BslFI GGGAC 3 cut(s) 467, 2073, 2316
BslI CCNNNNNNNGG 4 cut(s) 1453, 1468, 1792, 2360
BsmAI GTCTC 7 cut(s) 320, 1099, 1103, 1842, 1945, 2004, 2470
BsmBI CGTCTC 1 cut(s) 320
BsmFI GGGAC 3 cut(s) 467, 2073, 2316
BsmI GAATGC 1 cut(s) 1240
BsnI GGCC 6 cut(s) 710, 849, 1362, 1516, 2240, 2794
Bso31I GGTCTC 1 cut(s) 1945
BsoBI CYCGRG 2 cut(s) 1832, 2632
Bsp120I GGGCCC 1 cut(s) 2792
Bsp1286I GDGCHC 3 cut(s) 2584, 2639, 2796
Bsp19I CCATGG 2 cut(s) 1357, 2497
BspACI CCGC 6 cut(s) 74, 812, 1134, 1658, 2669, 2672
BspANI GGCC 6 cut(s) 710, 849, 1362, 1516, 2240, 2794
BspCNI CTCAG 6 cut(s) 453, 1066, 1122, 1299, 2014, 2189
BspFNI CGCG 2 cut(s) 462, 812
BspLI GGNNCC 3 cut(s) 1934, 2294, 2794
BspPI GGATC 2 cut(s) 2413, 2555
BspTNI GGTCTC 1 cut(s) 1945
BsrBI CCGCTC 1 cut(s) 1134
BsrDI GCAATG 2 cut(s) 1923, 2564
BsrFI RCCGGY 3 cut(s) 629, 2015, 2739
BsrI ACTGG 7 cut(s) 1086, 1364, 1579, 1797, 2344, 2506, 2644
BssAI RCCGGY 3 cut(s) 629, 2015, 2739
BssECI CCNNGG 9 cut(s) 687, 1357, 1466, 1467, 1805, 1936, 2358, 2497, 2545
BssNAI GTATAC 1 cut(s) 2492
BssSI CACGAG 1 cut(s) 2121
BssT1I CCWWGG 4 cut(s) 687, 1357, 2358, 2497
Bst1107I GTATAC 1 cut(s) 2492
Bst2BI CACGAG 1 cut(s) 2121
Bst2UI CCWGG 3 cut(s) 1468, 2547, 2728
Bst4CI ACNGT 6 cut(s) 180, 239, 676, 1141, 1940, 2433
Bst6I CTCTTC 1 cut(s) 1731
BstC8I GCNNGC 3 cut(s) 796, 1652, 2312
BstDEI CTNAG 9 cut(s) 302, 440, 634, 1043, 1074, 1130, 1307, 2001, 2176
BstDSI CCRYGG 3 cut(s) 1357, 1936, 2497
BstFNI CGCG 2 cut(s) 462, 812
BstHHI GCGC 2 cut(s) 464, 1986
BstMAI GTCTC 7 cut(s) 320, 1099, 1103, 1842, 1945, 2004, 2470
BstMWI GCNNNNNNNGC 3 cut(s) 125, 330, 866
BstNI CCWGG 3 cut(s) 1468, 2547, 2728
BstNSI RCATGY 2 cut(s) 1654, 2335
BstSCI CCNGG 3 cut(s) 1466, 2545, 2726
BstSLI GKGCMC 2 cut(s) 2584, 2796
BstUI CGCG 2 cut(s) 462, 812
BstV1I GCAGC 4 cut(s) 89, 115, 2449, 2653
BstV2I GAAGAC 1 cut(s) 2235
BstX2I RGATCY 5 cut(s) 1039, 1186, 1489, 2418, 2560
BstXI CCANNNNNNTGG 2 cut(s) 688, 1885
BstYI RGATCY 5 cut(s) 1039, 1186, 1489, 2418, 2560
BstZ17I GTATAC 1 cut(s) 2492
BsuRI GGCC 6 cut(s) 710, 849, 1362, 1516, 2240, 2794
BtgI CCRYGG 3 cut(s) 1357, 1936, 2497
BtrI CACGTC 1 cut(s) 2585
BtsIMutI CAGTG 6 cut(s) 534, 1093, 1146, 1215, 2637, 2689
Cac8I GCNNGC 3 cut(s) 796, 1652, 2312
CaiI CAGNNNCTG 1 cut(s) 373
CfoI GCGC 2 cut(s) 464, 1986
Cfr10I RCCGGY 3 cut(s) 629, 2015, 2739
Cfr13I GGNCC 6 cut(s) 992, 1361, 1514, 2389, 2792, 2793
CseI GACGC 1 cut(s) 21
CsiI ACCWGGT 1 cut(s) 2726
Csp6I GTAC 7 cut(s) 677, 1137, 1367, 1408, 2173, 2429, 2514
CspAI ACCGGT 2 cut(s) 2015, 2739
CspCI CAANNNNNGTGG 2 cut(s) 2340, 2375
CviQI GTAC 7 cut(s) 677, 1137, 1367, 1408, 2173, 2429, 2514
DdeI CTNAG 9 cut(s) 302, 440, 634, 1043, 1074, 1130, 1307, 2001, 2176
DraI TTTAAA 1 cut(s) 766
DraIII CACNNNGTG 1 cut(s) 2730
DrdI GACNNNNNNGTC 2 cut(s) 511, 1834
DseDI GACNNNNNNGTC 2 cut(s) 511, 1834
EaeI YGGCCR 1 cut(s) 2238
Eam1104I CTCTTC 1 cut(s) 1731
EarI CTCTTC 1 cut(s) 1731
Eco130I CCWWGG 4 cut(s) 687, 1357, 2358, 2497
Eco24I GRGCYC 1 cut(s) 2796
Eco31I GGTCTC 1 cut(s) 1945
Eco32I GATATC 1 cut(s) 1313
Eco47I GGWCC 2 cut(s) 992, 2389
Eco57I CTGAAG 2 cut(s) 350, 2610
Eco88I CYCGRG 2 cut(s) 1832, 2632
EcoO109I RGGNCCY 1 cut(s) 2792
EcoRI GAATTC 2 cut(s) 1890, 2033
EcoRII CCWGG 3 cut(s) 1466, 2545, 2726
EcoRV GATATC 1 cut(s) 1313
EcoT14I CCWWGG 4 cut(s) 687, 1357, 2358, 2497
EcoT22I ATGCAT 1 cut(s) 1240
EcoT38I GRGCYC 1 cut(s) 2796
ErhI CCWWGG 4 cut(s) 687, 1357, 2358, 2497
Esp3I CGTCTC 1 cut(s) 320
FalI AAGNNNNNCTT 2 cut(s) 137, 169
FaqI GGGAC 3 cut(s) 467, 2073, 2316
FauI CCCGC 2 cut(s) 805, 2665
FauNDI CATATG 1 cut(s) 2533
FbaI TGATCA 3 cut(s) 1212, 2721, 2766
FblI GTMKAC 1 cut(s) 2491
Fnu4HI GCNGC 6 cut(s) 75, 78, 129, 2438, 2667, 2670
FriOI GRGCYC 1 cut(s) 2796
Fsp4HI GCNGC 6 cut(s) 75, 78, 129, 2438, 2667, 2670
FspBI CTAG 7 cut(s) 531, 614, 1005, 1037, 1115, 1487, 1776
FspI TGCGCA 1 cut(s) 1985
GlaI GCGC 2 cut(s) 463, 1985
GluI GCNGC 6 cut(s) 75, 78, 129, 2438, 2667, 2670
GsaI CCCAGC 2 cut(s) 955, 1484
GsuI CTGGAG 2 cut(s) 1596, 2661
HaeIII GGCC 6 cut(s) 710, 849, 1362, 1516, 2240, 2794
HapII CCGG 4 cut(s) 630, 1454, 2016, 2740
HgaI GACGC 1 cut(s) 21
HhaI GCGC 2 cut(s) 464, 1986
Hin6I GCGC 2 cut(s) 462, 1984
HinP1I GCGC 2 cut(s) 462, 1984
HindIII AAGCTT 2 cut(s) 151, 2382
HpaII CCGG 4 cut(s) 630, 1454, 2016, 2740
HphI GGTGA 4 cut(s) 554, 2150, 2426, 2716
Hpy166II GTNNAC 4 cut(s) 2120, 2173, 2492, 2582
Hpy8I GTNNAC 4 cut(s) 2120, 2173, 2492, 2582
HpyAV CCTTC 7 cut(s) 1472, 1682, 2037, 2261, 2585, 2619, 2775
HpyCH4III ACNGT 6 cut(s) 180, 239, 676, 1141, 1940, 2433
HpyCH4IV ACGT 2 cut(s) 2183, 2584
HpyF10VI GCNNNNNNNGC 3 cut(s) 125, 330, 866
HpyF3I CTNAG 9 cut(s) 302, 440, 634, 1043, 1074, 1130, 1307, 2001, 2176
HpySE526I ACGT 2 cut(s) 2183, 2584
HspAI GCGC 2 cut(s) 462, 1984
Ksp22I TGATCA 3 cut(s) 1212, 2721, 2766
LmnI GCTCC 2 cut(s) 338, 803
Lsp1109I GCAGC 4 cut(s) 89, 115, 2449, 2653
LweI GCATC 5 cut(s) 106, 1247, 1762, 1995, 2355
MabI ACCWGGT 1 cut(s) 2726
MaeI CTAG 7 cut(s) 531, 614, 1005, 1037, 1115, 1487, 1776
MaeII ACGT 2 cut(s) 2183, 2584
MaeIII GTNAC 6 cut(s) 731, 894, 1781, 2179, 2735, 2760
MbiI CCGCTC 1 cut(s) 1134
MboII GAAGA 8 cut(s) 198, 356, 962, 1604, 1718, 1933, 2240, 2633
MfeI CAATTG 1 cut(s) 500
MflI RGATCY 5 cut(s) 1039, 1186, 1489, 2418, 2560
MhlI GDGCHC 3 cut(s) 2584, 2639, 2796
MlsI TGGCCA 1 cut(s) 2240
MluNI TGGCCA 1 cut(s) 2240
MlyI GAGTC 6 cut(s) 267, 379, 489, 1085, 1406, 1844
MmeI TCCRAC 4 cut(s) 360, 615, 825, 1681
Mox20I TGGCCA 1 cut(s) 2240
Mph1103I ATGCAT 1 cut(s) 1240
MroXI GAANNNNTTC 1 cut(s) 642
MscI TGGCCA 1 cut(s) 2240
MslI CAYNNNNRTG 1 cut(s) 16
Msp20I TGGCCA 1 cut(s) 2240
MspI CCGG 4 cut(s) 630, 1454, 2016, 2740
MspR9I CCNGG 3 cut(s) 1468, 2547, 2728
MunI CAATTG 1 cut(s) 500
Mva1269I GAATGC 1 cut(s) 1240
MvaI CCWGG 3 cut(s) 1468, 2547, 2728
MvnI CGCG 2 cut(s) 462, 812
MwoI GCNNNNNNNGC 3 cut(s) 125, 330, 866
NcoI CCATGG 2 cut(s) 1357, 2497
NdeI CATATG 1 cut(s) 2533
NlaIV GGNNCC 3 cut(s) 1934, 2294, 2794
NmeAIII GCCGAG 1 cut(s) 145
NmuCI GTSAC 4 cut(s) 731, 894, 2179, 2735
NsbI TGCGCA 1 cut(s) 1985
NsiI ATGCAT 1 cut(s) 1240
NspI RCATGY 2 cut(s) 1654, 2335
PaeI GCATGC 1 cut(s) 1654
PaeR7I CTCGAG 2 cut(s) 1832, 2632
PasI CCCWGGG 1 cut(s) 1467
PctI GAATGC 1 cut(s) 1240
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 4 cut(s) 83, 226, 1353, 2275
PflMI CCANNNNNTGG 1 cut(s) 1792
PinAI ACCGGT 2 cut(s) 2015, 2739
PkrI GCNGC 6 cut(s) 76, 79, 130, 2439, 2668, 2671
PleI GAGTC 6 cut(s) 266, 378, 488, 1084, 1405, 1843
PpsI GAGTC 6 cut(s) 266, 378, 488, 1084, 1405, 1843
PshBI ATTAAT 2 cut(s) 1325, 2070
Psp6I CCWGG 3 cut(s) 1466, 2545, 2726
PspFI CCCAGC 2 cut(s) 951, 1480
PspGI CCWGG 3 cut(s) 1466, 2545, 2726
PspN4I GGNNCC 3 cut(s) 1934, 2294, 2794
PspOMI GGGCCC 1 cut(s) 2792
PspPI GGNCC 6 cut(s) 992, 1361, 1514, 2389, 2792, 2793
PspXI VCTCGAGB 2 cut(s) 1832, 2632
PstNI CAGNNNCTG 1 cut(s) 373
PsuI RGATCY 5 cut(s) 1039, 1186, 1489, 2418, 2560
RsaI GTAC 7 cut(s) 678, 1138, 1368, 1409, 2174, 2430, 2515
RsaNI GTAC 7 cut(s) 677, 1137, 1367, 1408, 2173, 2429, 2514
RseI CAYNNNNRTG 1 cut(s) 16
SatI GCNGC 6 cut(s) 75, 78, 129, 2438, 2667, 2670
Sau96I GGNCC 6 cut(s) 992, 1361, 1514, 2389, 2792, 2793
ScaI AGTACT 1 cut(s) 2430
SchI GAGTC 6 cut(s) 267, 379, 489, 1085, 1406, 1844
ScrFI CCNGG 3 cut(s) 1468, 2547, 2728
SduI GDGCHC 3 cut(s) 2584, 2639, 2796
SexAI ACCWGGT 1 cut(s) 2726
SfaNI GCATC 5 cut(s) 106, 1247, 1762, 1995, 2355
Sfr274I CTCGAG 2 cut(s) 1832, 2632
SinI GGWCC 2 cut(s) 992, 2389
SlaI CTCGAG 2 cut(s) 1832, 2632
SmiMI CAYNNNNRTG 1 cut(s) 16
SmlI CTYRAG 6 cut(s) 489, 1100, 1731, 1832, 2424, 2632
SmoI CTYRAG 6 cut(s) 489, 1100, 1731, 1832, 2424, 2632
SphI GCATGC 1 cut(s) 1654
SsiI CCGC 6 cut(s) 74, 812, 1134, 1658, 2669, 2672
SspI AATATT 1 cut(s) 913
SspMI CTAG 7 cut(s) 531, 614, 1005, 1037, 1115, 1487, 1776
StyD4I CCNGG 3 cut(s) 1466, 2545, 2726
StyI CCWWGG 4 cut(s) 687, 1357, 2358, 2497
TaaI ACNGT 6 cut(s) 180, 239, 676, 1141, 1940, 2433
TaiI ACGT 2 cut(s) 2186, 2587
TaqI TCGA 8 cut(s) 261, 478, 1443, 1833, 1863, 2252, 2451, 2633
TatI WGTACW 3 cut(s) 1407, 2172, 2428
TauI GCSGC 2 cut(s) 77, 2672
TfiI GAWTC 4 cut(s) 83, 226, 1353, 2275
TscAI CASTG 6 cut(s) 541, 1093, 1146, 1222, 2644, 2689
TseFI GTSAC 4 cut(s) 731, 894, 2179, 2735
TseI GCWGC 4 cut(s) 77, 128, 2437, 2666
Tsp45I GTSAC 4 cut(s) 731, 894, 2179, 2735
TspGWI ACGGA 1 cut(s) 1365
TspRI CASTG 6 cut(s) 541, 1093, 1146, 1222, 2644, 2689
Van91I CCANNNNNTGG 1 cut(s) 1792
VneI GTGCAC 1 cut(s) 2580
VpaK11BI GGWCC 2 cut(s) 992, 2389
VspI ATTAAT 2 cut(s) 1325, 2070
XbaI TCTAGA 1 cut(s) 1036
XceI RCATGY 2 cut(s) 1654, 2335
XcmI CCANNNNNNNNNTGG 1 cut(s) 1371
XhoI CTCGAG 2 cut(s) 1832, 2632
XmiI GTMKAC 1 cut(s) 2491
XmnI GAANNNNTTC 1 cut(s) 642
XspI CTAG 7 cut(s) 531, 614, 1005, 1037, 1115, 1487, 1776
ZrmI AGTACT 1 cut(s) 2430
Zsp2I ATGCAT 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.