RchiOBHm_Chr1g0348951

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000024
Physical Location & Seq
Forward (+)
42023797 .. 42026828
3032 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57493

Sequence Viewer

Length: 2976 bp
ATGAGGGGGTTATCCCAGTGCTTGTTTCTGTTTTTGTTCTTTTTCTTCAAGGGGTGCAACACCAGTACTTCCCAAGAGGTAACCAGTACTGCTCATAAATCAATTATTATGTTTGTTGTTGTTGGTGGTGGTGGGGGTGGCGGTGGTGGTGGTGGTATTGGTAGAGTTTTTGTTCCATCTTATTGTCCTGAGGAGGAAAGCTCTGCGTTGCTACAATTCAAGCACAGCTTTACTATCAACGCATCTGCTTCGGGTTTAGAGAGTGCTTATCCGAAAGTGTTGTCATGGAAACAAACTCAAGGAGGAAACAACACCAGCTGCTGCACATGGGATGGGGTTGAGTGTGACGAAAAGACGGGTCATGTGATTGGGCTTGATCTTAGTAGCAGTTATCTCTACGGCTCTATCAACTCCAACAGCTCCCTCTTCCGTCTTGTTCACCTTCAGAGGCTCAACCTCGCTGATAACGACTTCAAATACTCTCAAATTCCTTCAACTATTAGGAATCTTCCTATGCTCACCCAACTCGACCTCTCTTTCTCCGTCTTTGCTGGTCAAGTCCCATCTCAACTTTCACAGTTGGTTAAGTTGTCACTCCTCAATCTTTCTTCCAATACCGAACCTTCTTCTGGTGTAGGATTGTTGAAACTTGATGGATCCAATTTCAGAAATCTAGTTCAAAACTTAACCAATCTAGAACACCTTTGTCTCCGTTACATCAACATATCTTCGACAATTCCCCATTCCATGGCCAATTTATCATTTTTGACAACCGTCGACTTACATCAGTGCGAGTTGTTTGGCGACTTCCCGGTAACAATTTTCCACTTCCAAAACTTGAAAAATCTTTATCTGAGAGACAACCAAGATCTCATTGGTTATTTGCCTGAATTTAATCAAAGTAGTCGTCTCACAACACTCGATGTTCATGGAACTAGATTTTCAGGGAACTTTCCTTCTTCCATCGGAAAGATTAATTCTTTGAAGCAGTTGGATGTGGCTGCATGCAATTTTACAGCAGGGTTGATTCCATCTTCTCTAGGTAATCTTAGACAGCTCACATATCTAGACATTTCAGCAAACAAATTTGGAGGTCTAATTCCTGAGTCTTTTGGAAACCTTACAAAATTGACTAATTTTAGGATTGCTACAAGTCCATTAACTATTGGTCCGGTCCCATCTTGGATAGGTAACTTCAGCAAACTAGTTTACCTAGATTTTTCATATAGTGGACTGAATAGTTCAATTCTTGCGTCATTTTCCAATCTCACGAACCTTGAGATTCTTTATCTTCATTACAATGACCTGAGAGGTACATTGGAGTTTCAAACATTTCGAAACTTACAAAATCTCAATCAACTCAATCTAAATGGTAATAATCTGGAATTTCTCACTGATTCCGTGATTATGAATGCAACAGTTCCACAGTTCAAGGTTCTAGGATTGGCTAGATGCAACTTGACACAGTTCCCATATTTCTTAAGATATCAAAAAAATTTGCAGGCTTTGTACCTTGATCAAAACAAAATCCAAGGCCAAGTACCGAAATGGATCTGGAACATGAGCACCGAAAGTCTGAAGTTCTTCCGCCTTGGCGATAACCTCCTTTCAGGCTTCGAGCAACTTCCAGTTGTGCTTCCTTGGATTAACTTACGATATTTAAGTCTTTTGTCCAACATGTTCCATGGGCCACTCCCAATACCGGCAGCATCCACTAGTGGCTATGAAGTTCAGAATAACAACTTTGCTGGAGAAGTTCCACCAGGGATCTGCAATATGAGTTCTCTTCTGGCCCTTGATGCGTCTAATAACAACTTCAGTGGCATGATTCCGCAGTGTTTCGGAAACTTTAGCGACCATCTGACACTTTTGCTGCTTGGAAATAACTCATTTCATGGCACTCTTCCTCAGACATACACCAACAAAAGCAACTTGAGGATGCTTGATGTGGGTCAAAATCAATTGCAAGGGCAACTACCGAGGTCATTGGCTAATTGTCTGTTGCTTGAGACTTTGATTCTGTCAAACAATAACTTGAGTGATGTTTTCCCCTTTTGGTTGGCAACCCTTCCGGAGTTAAAACTTTTGGCAATGCGGCATAATGGGTTCCATGGAGTGATAGGAAAGCCTGAAAACAATCAACGGTTCCCTAAGTTGCGTATTTTAGATATGTCTTATAACAATTTCACCGGCCAGTTTCTAGCTGAGCACATCTTCTTTGAGTATGCCATGAGACCAAATATGACTGTCAGCCAGACAACATACATGGAGGCTGACGTCAGGTACCAATTTGGTAATGGTAATGGTGAATCGGCCACTTTCTATTATGATGCCCCGATTACAATAACGAGTAAAGGTCTGGACAGATACTATTCAAAGATTCAAGAAGCCTTTGCAGTCATTGATATCTCATGCAACAAATTTGAAGGGAAGATTGATGAATGGATTGGAAATCTAAAAGGGCTTCGCTCGCTGAATTTTTCCAATAACCTTCTCACCGGTGGGATCCCATCATCTTTGGGAAAGTTAACAGATCTCGAATCACTGGACCTTTCGAATAACAAGCTCTCAGAAGAGATCCCACAACAACTGGCGCAACTGACATTCCTTGCACAATTCAATGTCTCTCACAACAATCTCACAGGTCCTATACCGAGTGGAACCCAACTCAGGGGGTTTAATGTCACTGCTTATGAGGGAAACTCCGCACTATGTGGAGATCCATTGCCAAAGAAATGTGGGAACTCTAATACCCCAGCTCAACTGCCACCTTCTGGAATAGAAGACAACAGTTCAGGGTCCGGAATTGAATTTGATTGGATTTTTGTGTTGGCTGGATACGGAAGTGGGTTGGTTATAGGAGTGGTACTTGCGGATGTAGCAATCACACGGAGGCCTGTGTTGTTTCTTCAGATAGTTGGAACATTGATCAGACTAATGGAAAAGATCACAAGCTGGAAGAGGTCTGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

991

Amino Acids

109.52

Weight (kDa)

6.64

Isoelectric Point (pI)

35.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 64 - 116 6.4e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 137 - 216 2.4e-06 Leucine-rich repeat region
LRR_14 PF23598 226 - 334 1.4e-07 Leucine-rich repeat region
LRR_14 PF23598 320 - 507 1.4e-12 Leucine-rich repeat region
LRR_8 PF13855 669 - 729 7.9e-06 Leucine rich repeat
LRR_8 PF13855 800 - 856 3e-08 Leucine rich repeat
LRR_4 PF12799 821 - 857 2.1e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000024)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G45616 AT1G47890 AT2G25440 AT2G32660 AT2G32660 AT2G32680 AT2G33020 AT2G33030 AT2G33050 AT2G33060 AT2G33080 AT3G24900 AT3G24900 AT3G24982 AT3G25010 AT3G25010 AT3G25020 AT4G13810 AT4G13810 AT4G13810 AT4G13820 AT4G13880 AT4G13920 AT5G40170
fragaria_vesca FvH4_2g05950 FvH4_3g24110 FvH4_5g04000 FvH4_6g04890 FvH4_6g31760 FvH4_6g40760 FvH4_6g40800 FvH4_6g40820 FvH4_6g40840 FvH4_6g40842 FvH4_6g40843 FvH4_6g40847 FvH4_7g06093 FvH4_7g10111 FvH4_7g10112 FvH4_7g10113 FvH4_7g10114 FvH4_7g10130 FvH4_7g10150 FvH4_7g31280
malus_domestica MD00G1164200.v1.1 MD00G1164300.v1.1 MD01G1109000.v1.1 MD01G1109100.v1.1 MD07G1068900.v1.1 MD07G1069000.v1.1 MD07G1069300.v1.1 MD07G1069600.v1.1 MD07G1106700.v1.1 MD07G1106900.v1.1 MD07G1107200.v1.1 MD07G1107300.v1.1 MD07G1107400.v1.1 MD07G1107800.v1.1 MD09G1124300.v1.1 MD09G1124700.v1.1 MD09G1124800.v1.1 MD09G1124900.v1.1 MD09G1125100.v1.1 MD09G1125300.v1.1 MD09G1125400.v1.1 MD09G1125500.v1.1 MD09G1125600.v1.1 MD09G1130600.v1.1 MD09G1130900.v1.1 MD09G1131100.v1.1 MD17G1115000.v1.1 MD17G1115100.v1.1 MD17G1115300.v1.1 MD17G1115500.v1.1
prunus_persica Prupe.2G128400_v2.0.a1 Prupe.2G128600_v2.0.a1 Prupe.2G128700_v2.0.a1 Prupe.2G130100_v2.0.a1 Prupe.2G130300_v2.0.a1 Prupe.2G130400_v2.0.a1 Prupe.2G130500_v2.0.a1 Prupe.2G130600_v2.0.a1 Prupe.2G130700_v2.0.a1 Prupe.2G130900_v2.0.a1 Prupe.2G131000_v2.0.a1 Prupe.3G094800_v2.0.a1 Prupe.3G094900_v2.0.a1 Prupe.3G195900_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G196000_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199200_v2.0.a1 Prupe.3G199400_v2.0.a1 Prupe.3G199500_v2.0.a1 Prupe.3G199900_v2.0.a1 Prupe.3G200000_v2.0.a1 Prupe.4G168900_v2.0.a1 Prupe.4G232400_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233100_v2.0.a1 Prupe.4G233200_v2.0.a1 Prupe.4G233600_v2.0.a1 Prupe.4G234000_v2.0.a1 Prupe.4G234200_v2.0.a1 Prupe.4G279000_v2.0.a1 Prupe.4G279000_v2.0.a1
pyrus_communis pycom01g13640 pycom05g05290 pycom05g05300 pycom05g05310 pycom05g05320 pycom07g05310 pycom07g05920 pycom07g09130 pycom07g09160 pycom07g09190 pycom07g09210 pycom09g04810 pycom09g04820 pycom09g04850 pycom09g04860 pycom09g04870 pycom09g04930 pycom09g04940 pycom09g04960 pycom09g04980 pycom11g17040 pycom11g17080 pycom11g17100 pycom17g10620 pycom17g10640 pycom17g10650 pycom17g10660
rosa_chinensis RchiOBHm_Chr1g0340311 RchiOBHm_Chr1g0340341 RchiOBHm_Chr1g0340351 RchiOBHm_Chr1g0340361 RchiOBHm_Chr1g0340411 RchiOBHm_Chr1g0340481 RchiOBHm_Chr1g0340521 RchiOBHm_Chr1g0340591 RchiOBHm_Chr1g0340631 RchiOBHm_Chr1g0340681 RchiOBHm_Chr1g0344431 RchiOBHm_Chr1g0346361 RchiOBHm_Chr1g0347011 RchiOBHm_Chr1g0347021 RchiOBHm_Chr1g0347031 RchiOBHm_Chr1g0347041 RchiOBHm_Chr1g0347561 RchiOBHm_Chr1g0347571 RchiOBHm_Chr1g0347811 RchiOBHm_Chr1g0347841 RchiOBHm_Chr1g0347861 RchiOBHm_Chr1g0348951 RchiOBHm_Chr1g0357511 RchiOBHm_Chr1g0367531 RchiOBHm_Chr1g0368411 RchiOBHm_Chr2g0154781 RchiOBHm_Chr2g0154841 RchiOBHm_Chr2g0155021 RchiOBHm_Chr2g0155091 RchiOBHm_Chr2g0155101 RchiOBHm_Chr2g0156211 RchiOBHm_Chr2g0156251 RchiOBHm_Chr2g0156281 RchiOBHm_Chr2g0156371 RchiOBHm_Chr2g0156381 RchiOBHm_Chr2g0156411 RchiOBHm_Chr2g0173751 RchiOBHm_Chr3g0494931 RchiOBHm_Chr4g0385161 RchiOBHm_Chr4g0385171 RchiOBHm_Chr4g0408231 RchiOBHm_Chr4g0408241 RchiOBHm_Chr5g0005251 RchiOBHm_Chr5g0030911 RchiOBHm_Chr5g0042831 RchiOBHm_Chr5g0042871 RchiOBHm_Chr5g0042881 RchiOBHm_Chr5g0043081 RchiOBHm_Chr5g0043131 RchiOBHm_Chr5g0043361 RchiOBHm_Chr5g0043371 RchiOBHm_Chr5g0043381 RchiOBHm_Chr5g0083391 RchiOBHm_Chr5g0083401 RchiOBHm_Chr5g0083441 RchiOBHm_Chr5g0083451 RchiOBHm_Chr5g0083461 RchiOBHm_Chr5g0083471 RchiOBHm_Chr5g0083501 RchiOBHm_Chr5g0083531 RchiOBHm_Chr5g0083601 RchiOBHm_Chr5g0083611 RchiOBHm_Chr5g0083651 RchiOBHm_Chr6g0257441 RchiOBHm_Chr6g0257601 RchiOBHm_Chr6g0257621 RchiOBHm_Chr6g0257631 RchiOBHm_Chr6g0263371 RchiOBHm_Chr6g0263391 RchiOBHm_Chr6g0263401 RchiOBHm_Chr6g0263411
rosa_laevigata RLG00000003361 RLG00000008615 RLG00000010252 RLG00000014349 RLG00000014351 RLG00000014359 RLG00000014696 RLG00000014706 RLG00000014711 RLG00000014712 RLG00000018865 RLG00000020803 RLG00000020804 RLG00000020808 RLG00000020811 RLG00000020812 RLG00000020816 RLG00000020817 RLG00000020818 RLG00000020896 RLG00000020902 RLG00000020904 RLG00000020905 RLG00000020906 RLG00000020907 RLG00000020908 RLG00000020909 RLG00000020910 RLG00000022216 RLG00000022218 RLG00000027211 RLG00000027212 RLG00000027213 RLG00000027214 RLG00000028474 RLG00000028475 RLG00000028613 RLG00000028708 RLG00000028709 RLG00000028737 RLG00000028738 RLG00000028764 RLG00000029010 RLG00000029012 RLG00000029019 RLG00000029022 RLG00000029025 RLG00000029027 RLG00000029031 RLG00000029035 RLG00000029141 RLG00000030130 RLG00000033005 RLG00000033271 RLG00000034150 RLG00000034153 RLG00000034158 RLG00000034160 RLG00000034164 RLG00000034166 RLG00000034167 RLG00000034183 RLG00000037034 RLG00000037035
rosa_multiflora Rmu_co8046282.1_g000001 Rmu_co8137732.1_g000001 Rmu_co8267491.1_g000001 Rmu_co8329695.1_g000001 Rmu_co8330005.1_g000001 Rmu_co8351095.1_g000001 Rmu_co8357797.1_g000001 Rmu_co8424479.1_g000001 Rmu_co8425575.1_g000001 Rmu_co8485497.1_g000001 Rmu_sc0000060.1_g000020 Rmu_sc0000260.1_g000009 Rmu_sc0000565.1_g000006 Rmu_sc0000566.1_g000023 Rmu_sc0000566.1_g000025 Rmu_sc0000566.1_g000031 Rmu_sc0000566.1_g000033 Rmu_sc0000566.1_g000036 Rmu_sc0000566.1_g000045 Rmu_sc0000566.1_g000048 Rmu_sc0000698.1_g000009 Rmu_sc0000698.1_g000031 Rmu_sc0000820.1_g000049 Rmu_sc0001099.1_g000008 Rmu_sc0001167.1_g000009 Rmu_sc0001167.1_g000070 Rmu_sc0001205.1_g000014 Rmu_sc0001444.1_g000008 Rmu_sc0001836.1_g000017 Rmu_sc0001836.1_g000021 Rmu_sc0001836.1_g000065 Rmu_sc0001974.1_g000014 Rmu_sc0002048.1_g000006 Rmu_sc0002048.1_g000018 Rmu_sc0002048.1_g000034 Rmu_sc0002079.1_g000008 Rmu_sc0002079.1_g000012 Rmu_sc0002079.1_g000034 Rmu_sc0002161.1_g000018 Rmu_sc0002245.1_g000018 Rmu_sc0002245.1_g000040 Rmu_sc0002538.1_g000004 Rmu_sc0002595.1_g000003 Rmu_sc0002595.1_g000004 Rmu_sc0002709.1_g000027 Rmu_sc0002709.1_g000043 Rmu_sc0003086.1_g000004 Rmu_sc0003188.1_g000002 Rmu_sc0003188.1_g000003 Rmu_sc0003301.1_g000003 Rmu_sc0003522.1_g000040 Rmu_sc0003785.1_g000004 Rmu_sc0003918.1_g000002 Rmu_sc0003918.1_g000015 Rmu_sc0004325.1_g000017 Rmu_sc0004355.1_g000007 Rmu_sc0004976.1_g000006 Rmu_sc0004976.1_g000010 Rmu_sc0004976.1_g000024 Rmu_sc0005144.1_g000016 Rmu_sc0005167.1_g000002 Rmu_sc0005451.1_g000002 Rmu_sc0006217.1_g000004 Rmu_sc0006908.1_g000027 Rmu_sc0008148.1_g000016 Rmu_sc0008148.1_g000044 Rmu_sc0008148.1_g000047 Rmu_sc0008734.1_g000012 Rmu_sc0008734.1_g000017 Rmu_sc0010137.1_g000014 Rmu_sc0010308.1_g000003 Rmu_sc0010719.1_g000001 Rmu_sc0014922.1_g000001 Rmu_sc0020148.1_g000001 Rmu_sc0024761.1_g000002 Rmu_sc0024761.1_g000003 Rmu_sc0027638.1_g000002 Rmu_sc0030439.1_g000001 Rmu_sc0033559.1_g000001 Rmu_sc0036789.1_g000001 Rmu_ssc0000173.1_g000015 Rmu_ssc0000245.1_g000025 Rmu_ssc0000342.1_g000001
rosa_roxburghii Rroxscaffold_1G00000980 Rroxscaffold_1G00000990 Rroxscaffold_1G00001050 Rroxscaffold_1G00001070 Rroxscaffold_1G00037490 Rroxscaffold_1G00037600 Rroxscaffold_1G00037640 Rroxscaffold_1G00037680 Rroxscaffold_1G00037700 Rroxscaffold_1G00037720 Rroxscaffold_1G00037780 Rroxscaffold_1G00037810 Rroxscaffold_2G00078660 Rroxscaffold_2G00093050 Rroxscaffold_2G00093070 Rroxscaffold_2G00093120 Rroxscaffold_2G00093140 Rroxscaffold_2G00093950 Rroxscaffold_2G00093980 Rroxscaffold_2G00093990 Rroxscaffold_2G00094050 Rroxscaffold_2G00094080 Rroxscaffold_2G00125300 Rroxscaffold_3G00218210 Rroxscaffold_4G00288530 Rroxscaffold_4G00288580 Rroxscaffold_4G00306260 Rroxscaffold_4G00306350 Rroxscaffold_4G00306420 Rroxscaffold_4G00307420 Rroxscaffold_4G00307660 Rroxscaffold_4G00307690 Rroxscaffold_4G00307720 Rroxscaffold_4G00311180 Rroxscaffold_4G00311220 Rroxscaffold_4G00311240 Rroxscaffold_4G00315940 Rroxscaffold_4G00315950 Rroxscaffold_5G00333080 Rroxscaffold_7G00208670 Rroxscaffold_7G00208690 Rroxscaffold_7G00208700 Rroxscaffold_7G00208710 Rroxscaffold_7G00208830 Rroxscaffold_7G00208840 Rroxscaffold_7G00208860
rosa_rugosa Rorug01G0052800 Rorug01G0052900 Rorug01G0084800 Rorug01G0162300.1 Rorug01G0162600.1 Rorug01G0162700.1 Rorug01G0163100.1 Rorug01G0163300.1 Rorug01G0163800.1 Rorug01G0163900.1 Rorug01G0164200.1 Rorug01G0164400.1 Rorug01G0187700 Rorug01G0187800 Rorug01G0189400 Rorug01G0189500 Rorug01G0189600 Rorug01G0189800 Rorug01G0190200 Rorug01G0190300 Rorug01G0198800 Rorug01G0341700 Rorug02G0445100 Rorug02G0445300 Rorug02G0445400 Rorug02G0452600 Rorug02G0452700 Rorug02G0452800 Rorug02G0453000 Rorug02G0522500 Rorug02G0572500 Rorug05G0203900 Rorug05G0204100 Rorug05G0204200 Rorug05G0204400 Rorug05G0205500 Rorug05G0205600 Rorug05G0484800 Rorug05G0484800 Rorug05G0484900 Rorug05G0570000 Rorug05G0570100 Rorug05G0570200 Rorug05G0570300.1 Rorug05G0570800 Rorug05G0570900 Rorug05G0572200 Rorug05G0572500
rosa_samantha Rh1AG178100 Rh1AG178500 Rh1AG178800 Rh1AG206800 Rh1AG207200 Rh1AG207700 Rh1AG348900 Rh2AG316000 Rh2BG522100 Rh2BG522400 Rh2BG530500 Rh2BG531000 Rh3AG317700 Rh4CG003500 Rh5AG289600 Rh5BG293800 Rh5BG294000 Rh5BG295500 Rh5BG296000 Rh5BG296300 Rh5BG297800 Rh5DG303900 Rh5DG305200 Rh5DG305500 Rh6AG126500
rosa_wichuraiana Rw0G002430 Rw0G013640 Rw1G014810 Rw1G014830 Rw1G014860 Rw1G014870 Rw1G014910 Rw1G017200 Rw1G017210 Rw1G017300 Rw1G017610 Rw1G017670 Rw1G017710 Rw1G017730 Rw1G018330 Rw1G018440 Rw1G031010 Rw1G031040 Rw1G031060 Rw2G042020 Rw2G042760 Rw2G042790 Rw2G042800 Rw2G053460 Rw2G053470 Rw4G000600 Rw5G019620 Rw5G027010 Rw5G049870 Rw5G050460 Rw5G050530 Rw6G007730 Rw6G007740 Rw6G007770 Rw6G007860 Rw6G010660 Rw6G010800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2178
AatII GACGTC 1 cut(s) 2280
Acc65I GGTACC 1 cut(s) 2283
AccB1I GGYRCC 1 cut(s) 2283
AccB7I CCANNNNNTGG 2 cut(s) 748, 2774
AccI GTMKAC 1 cut(s) 777
AccIII TCCGGA 2 cut(s) 2071, 2801
AciI CCGC 6 cut(s) 141, 1588, 1832, 2095, 2706, 2873
AclWI GGATC 8 cut(s) 651, 664, 1559, 1775, 2500, 2513, 2572, 2714
AcoI YGGCCR 3 cut(s) 750, 2191, 2313
AcsI RAATTY 8 cut(s) 486, 890, 1085, 1385, 1495, 2420, 2476, 2810
AcuI CTGAAG 5 cut(s) 428, 1180, 1598, 1801, 2894
AcyI GRCGYC 1 cut(s) 2277
AdeI CACNNNGTG 1 cut(s) 2714
AfaI GTAC 7 cut(s) 67, 88, 1315, 1511, 1542, 2285, 2868
AfiI CCNNNNNNNGG 6 cut(s) 629, 748, 1702, 2670, 2671, 2774
AflII CTTAAG 1 cut(s) 1480
AflIII ACRYGT 1 cut(s) 1677
AgeI ACCGGT 1 cut(s) 2498
AhlI ACTAGT 2 cut(s) 1204, 1715
AjnI CCWGG 1 cut(s) 1762
AluBI AGCT 9 cut(s) 201, 228, 318, 420, 1057, 2204, 2566, 2759, 2955
AluI AGCT 9 cut(s) 201, 228, 318, 420, 1057, 2204, 2566, 2759, 2955
Alw21I GWGCWC 2 cut(s) 1568, 2211
Alw26I GTCTC 6 cut(s) 713, 852, 914, 2003, 2227, 2629
AlwI GGATC 8 cut(s) 651, 664, 1559, 1775, 2500, 2513, 2572, 2714
AlwNI CAGNNNCTG 1 cut(s) 321
Aor13HI TCCGGA 2 cut(s) 2071, 2801
AoxI GGCC 7 cut(s) 750, 1534, 1688, 1791, 2191, 2313, 2894
ApeKI GCWGC 5 cut(s) 318, 321, 1001, 1706, 1873
ApoI RAATTY 8 cut(s) 486, 890, 1085, 1385, 1495, 2420, 2476, 2810
ArsI GACNNNNNNTTYG 4 cut(s) 266, 298, 892, 924
AseI ATTAAT 1 cut(s) 975
AsiGI ACCGGT 1 cut(s) 2498
Asp700I GAANNNNTTC 1 cut(s) 1583
Asp718I GGTACC 1 cut(s) 2283
AspLEI GCGC 1 cut(s) 2596
AspS9I GGNCC 7 cut(s) 1169, 1174, 1688, 1792, 2548, 2645, 2799
AsuC2I CCSGG 1 cut(s) 812
AsuHPI GGTGA 5 cut(s) 431, 511, 2179, 2318, 2488
AsuII TTCGAA 2 cut(s) 1336, 2555
AvaII GGWCC 5 cut(s) 1169, 1174, 2548, 2645, 2799
AxyI CCTNAGG 1 cut(s) 189
BaeI ACNNNNGTAYC 2 cut(s) 2830, 2863
BalI TGGCCA 1 cut(s) 752
BamHI GGATCC 2 cut(s) 656, 2505
BanI GGYRCC 1 cut(s) 2283
BbsI GAAGAC 1 cut(s) 2790
Bbv12I GWGCWC 2 cut(s) 1568, 2211
BbvI GCAGC 5 cut(s) 305, 308, 988, 1718, 1860
BccI CCATC 9 cut(s) 184, 326, 571, 647, 971, 1039, 1186, 1866, 2518
BceAI ACGGC 1 cut(s) 415
BcgI CGANNNNNNTGC 2 cut(s) 231, 265
BciT130I CCWGG 1 cut(s) 1764
BciVI GTATCC 1 cut(s) 2831
BclI TGATCA 2 cut(s) 1516, 2928
BcnI CCSGG 1 cut(s) 812
BcoDI GTCTC 6 cut(s) 713, 852, 914, 2003, 2227, 2629
BcuI ACTAGT 2 cut(s) 1204, 1715
BfrI CTTAAG 1 cut(s) 1480
BfuI GTATCC 1 cut(s) 2831
BglII AGATCT 2 cut(s) 868, 2533
BisI GCNGC 6 cut(s) 319, 322, 1002, 1707, 1874, 2096
BlpI GCTNAGC 1 cut(s) 2205
BlsI GCNGC 6 cut(s) 320, 323, 1003, 1708, 1875, 2097
BmcAI AGTACT 2 cut(s) 67, 88
Bme1390I CCNGG 2 cut(s) 812, 1764
Bme18I GGWCC 5 cut(s) 1169, 1174, 2548, 2645, 2799
BmgT120I GGNCC 7 cut(s) 1169, 1174, 1688, 1792, 2548, 2645, 2799
BmiI GGNNCC 8 cut(s) 658, 1176, 2108, 2147, 2285, 2507, 2662, 2800
BmrFI CCNGG 2 cut(s) 812, 1764
BmrI ACTGGG 1 cut(s) 10
BmsI GCATC 6 cut(s) 251, 1442, 1718, 1789, 1929, 2320
BmuI ACTGGG 1 cut(s) 10
BoxI GACNNNNGTC 1 cut(s) 773
BpiI GAAGAC 1 cut(s) 2790
BplI GAGNNNNNCTC 4 cut(s) 185, 217, 2687, 2719
BpmI CTGGAG 1 cut(s) 1770
Bpu1102I GCTNAGC 1 cut(s) 2205
Bpu14I TTCGAA 2 cut(s) 1336, 2555
BpuEI CTTGAG 5 cut(s) 282, 1298, 1954, 2027, 2056
BpuMI CCSGG 1 cut(s) 812
BsaHI GRCGYC 1 cut(s) 2277
BsaI GGTCTC 1 cut(s) 2227
BsaJI CCNNGG 8 cut(s) 747, 1531, 1591, 1640, 1684, 1763, 1979, 2110
BsaWI WCCGGW 4 cut(s) 1171, 2071, 2498, 2801
Bsc4I CCNNNNNNNGG 6 cut(s) 629, 748, 1702, 2670, 2671, 2774
Bse118I RCCGGY 3 cut(s) 1702, 2189, 2498
Bse1I ACTGG 7 cut(s) 16, 63, 84, 1628, 2194, 2550, 2595
Bse21I CCTNAGG 1 cut(s) 189
Bse3DI GCAATG 2 cut(s) 2097, 2723
BseAI TCCGGA 2 cut(s) 2071, 2801
BseBI CCWGG 1 cut(s) 1764
BseDI CCNNGG 8 cut(s) 747, 1531, 1591, 1640, 1684, 1763, 1979, 2110
BseGI GGATG 5 cut(s) 337, 1000, 1709, 1944, 2881
BseLI CCNNNNNNNGG 6 cut(s) 629, 748, 1702, 2670, 2671, 2774
BseMI GCAATG 2 cut(s) 2097, 2723
BseMII CTCAG 8 cut(s) 180, 845, 1095, 1298, 1922, 2196, 2583, 2683
BseNI ACTGG 7 cut(s) 16, 63, 84, 1628, 2194, 2550, 2595
BseRI GAGGAG 2 cut(s) 206, 587
BseXI GCAGC 5 cut(s) 305, 308, 988, 1718, 1860
BseYI CCCAGC 1 cut(s) 2755
BsgI GTGCAG 1 cut(s) 307
BshFI GGCC 7 cut(s) 752, 1536, 1690, 1793, 2193, 2315, 2896
BshNI GGYRCC 1 cut(s) 2283
BshTI ACCGGT 1 cut(s) 2498
BsiHKAI GWGCWC 2 cut(s) 1568, 2211
BsiSI CCGG 7 cut(s) 812, 1172, 1703, 2072, 2190, 2499, 2802
BslFI GGGAC 2 cut(s) 545, 1160
BslI CCNNNNNNNGG 6 cut(s) 629, 748, 1702, 2670, 2671, 2774
BsmAI GTCTC 6 cut(s) 713, 852, 914, 2003, 2227, 2629
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 2 cut(s) 545, 1160
BsmI GAATGC 1 cut(s) 1417
BsnI GGCC 7 cut(s) 752, 1536, 1690, 1793, 2193, 2315, 2896
Bso31I GGTCTC 1 cut(s) 2227
Bsp119I TTCGAA 2 cut(s) 1336, 2555
Bsp1286I GDGCHC 2 cut(s) 1568, 2211
Bsp13I TCCGGA 2 cut(s) 2071, 2801
Bsp1720I GCTNAGC 1 cut(s) 2205
Bsp19I CCATGG 3 cut(s) 747, 1684, 2110
BspACI CCGC 6 cut(s) 141, 1588, 1832, 2095, 2706, 2873
BspANI GGCC 7 cut(s) 752, 1536, 1690, 1793, 2193, 2315, 2896
BspCNI CTCAG 8 cut(s) 181, 846, 1096, 1299, 1921, 2197, 2582, 2682
BspEI TCCGGA 2 cut(s) 2071, 2801
BspLI GGNNCC 8 cut(s) 658, 1176, 2108, 2147, 2285, 2507, 2662, 2800
BspPI GGATC 8 cut(s) 651, 664, 1559, 1775, 2500, 2513, 2572, 2714
BspT104I TTCGAA 2 cut(s) 1336, 2555
BspT107I GGYRCC 1 cut(s) 2283
BspTI CTTAAG 1 cut(s) 1480
BspTNI GGTCTC 1 cut(s) 2227
BsrDI GCAATG 2 cut(s) 2097, 2723
BsrFI RCCGGY 3 cut(s) 1702, 2189, 2498
BsrI ACTGG 7 cut(s) 16, 63, 84, 1628, 2194, 2550, 2595
BssAI RCCGGY 3 cut(s) 1702, 2189, 2498
BssECI CCNNGG 8 cut(s) 747, 1531, 1591, 1640, 1684, 1763, 1979, 2110
BssNI GRCGYC 1 cut(s) 2277
BssT1I CCWWGG 6 cut(s) 747, 1531, 1591, 1640, 1684, 2110
Bst2UI CCWGG 1 cut(s) 1764
Bst4CI ACNGT 8 cut(s) 579, 775, 1420, 1428, 1467, 2145, 2248, 2792
Bst6I CTCTTC 5 cut(s) 431, 1791, 1908, 2568, 2954
BstACI GRCGYC 1 cut(s) 2277
BstAFI CTTAAG 1 cut(s) 1480
BstBI TTCGAA 2 cut(s) 1336, 2555
BstC8I GCNNGC 3 cut(s) 1006, 1503, 2471
BstDSI CCRYGG 3 cut(s) 747, 1684, 2110
BstEII GGTNACC 1 cut(s) 79
BstF5I GGATG 5 cut(s) 337, 1000, 1709, 1944, 2881
BstHHI GCGC 1 cut(s) 2596
BstMAI GTCTC 6 cut(s) 713, 852, 914, 2003, 2227, 2629
BstMWI GCNNNNNNNGC 3 cut(s) 1799, 2470, 2879
BstNI CCWGG 1 cut(s) 1764
BstNSI RCATGY 2 cut(s) 1008, 1681
BstPAI GACNNNNGTC 1 cut(s) 773
BstPI GGTNACC 1 cut(s) 79
BstSCI CCNGG 2 cut(s) 810, 1762
BstV1I GCAGC 5 cut(s) 305, 308, 988, 1718, 1860
BstV2I GAAGAC 1 cut(s) 2790
BstX2I RGATCY 8 cut(s) 656, 868, 1551, 1767, 2505, 2533, 2577, 2719
BstYI RGATCY 8 cut(s) 656, 868, 1551, 1767, 2505, 2533, 2577, 2719
Bsu36I CCTNAGG 1 cut(s) 189
BsuI GTATCC 1 cut(s) 2831
BsuRI GGCC 7 cut(s) 752, 1536, 1690, 1793, 2193, 2315, 2896
BtgI CCRYGG 3 cut(s) 747, 1684, 2110
BtsCI GGATG 5 cut(s) 337, 1000, 1709, 1944, 2881
BtsI GCAGTG 2 cut(s) 1841, 2685
BtsIMutI CAGTG 7 cut(s) 23, 794, 1392, 1825, 1841, 2543, 2685
Cac8I GCNNGC 3 cut(s) 1006, 1503, 2471
CaiI CAGNNNCTG 1 cut(s) 321
CfoI GCGC 1 cut(s) 2596
Cfr10I RCCGGY 3 cut(s) 1702, 2189, 2498
Cfr13I GGNCC 7 cut(s) 1169, 1174, 1688, 1792, 2548, 2645, 2799
CseI GACGC 2 cut(s) 1242, 1791
Csp6I GTAC 7 cut(s) 66, 87, 1314, 1510, 1541, 2284, 2867
CspAI ACCGGT 1 cut(s) 2498
CspCI CAANNNNNGTGG 2 cut(s) 1801, 1836
CviQI GTAC 7 cut(s) 66, 87, 1314, 1510, 1541, 2284, 2867
DraIII CACNNNGTG 1 cut(s) 2714
EaeI YGGCCR 3 cut(s) 750, 2191, 2313
Eam1104I CTCTTC 5 cut(s) 431, 1791, 1908, 2568, 2954
EarI CTCTTC 5 cut(s) 431, 1791, 1908, 2568, 2954
EciI GGCGGA 1 cut(s) 1577
Eco130I CCWWGG 6 cut(s) 747, 1531, 1591, 1640, 1684, 2110
Eco147I AGGCCT 1 cut(s) 2896
Eco31I GGTCTC 1 cut(s) 2227
Eco32I GATATC 2 cut(s) 1487, 2407
Eco47I GGWCC 5 cut(s) 1169, 1174, 2548, 2645, 2799
Eco57I CTGAAG 5 cut(s) 428, 1180, 1598, 1801, 2894
Eco81I CCTNAGG 1 cut(s) 189
Eco91I GGTNACC 1 cut(s) 79
EcoO109I RGGNCCY 1 cut(s) 2645
EcoO65I GGTNACC 1 cut(s) 79
EcoRII CCWGG 1 cut(s) 1762
EcoRV GATATC 2 cut(s) 1487, 2407
EcoT14I CCWWGG 6 cut(s) 747, 1531, 1591, 1640, 1684, 2110
ErhI CCWWGG 6 cut(s) 747, 1531, 1591, 1640, 1684, 2110
Esp3I CGTCTC 1 cut(s) 914
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FaqI GGGAC 2 cut(s) 545, 1160
FbaI TGATCA 2 cut(s) 1516, 2928
FblI GTMKAC 1 cut(s) 777
Fnu4HI GCNGC 6 cut(s) 319, 322, 1002, 1707, 1874, 2096
FokI GGATG 5 cut(s) 344, 1007, 1696, 1951, 2888
Fsp4HI GCNGC 6 cut(s) 319, 322, 1002, 1707, 1874, 2096
GlaI GCGC 1 cut(s) 2595
GluI GCNGC 6 cut(s) 319, 322, 1002, 1707, 1874, 2096
GsaI CCCAGC 1 cut(s) 2759
GsuI CTGGAG 1 cut(s) 1770
HaeIII GGCC 7 cut(s) 752, 1536, 1690, 1793, 2193, 2315, 2896
HapII CCGG 7 cut(s) 812, 1172, 1703, 2072, 2190, 2499, 2802
HgaI GACGC 2 cut(s) 1242, 1791
HhaI GCGC 1 cut(s) 2596
Hin1I GRCGYC 1 cut(s) 2277
Hin6I GCGC 1 cut(s) 2594
HinP1I GCGC 1 cut(s) 2594
HincII GTYRAC 2 cut(s) 778, 2529
HindII GTYRAC 2 cut(s) 778, 2529
HpaI GTTAAC 1 cut(s) 2529
HpaII CCGG 7 cut(s) 812, 1172, 1703, 2072, 2190, 2499, 2802
HphI GGTGA 5 cut(s) 431, 511, 2179, 2318, 2488
Hpy166II GTNNAC 5 cut(s) 439, 778, 1210, 1232, 2529
Hpy8I GTNNAC 5 cut(s) 439, 778, 1210, 1232, 2529
Hpy99I CGWCG 1 cut(s) 779
HpyAV CCTTC 8 cut(s) 452, 501, 633, 966, 2078, 2420, 2501, 2781
HpyCH4III ACNGT 8 cut(s) 579, 775, 1420, 1428, 1467, 2145, 2248, 2792
HpyCH4IV ACGT 1 cut(s) 2277
HpyF10VI GCNNNNNNNGC 3 cut(s) 1799, 2470, 2879
HpySE526I ACGT 1 cut(s) 2277
Hsp92I GRCGYC 1 cut(s) 2277
HspAI GCGC 1 cut(s) 2594
Kpn2I TCCGGA 2 cut(s) 2071, 2801
KpnI GGTACC 1 cut(s) 2287
Ksp22I TGATCA 2 cut(s) 1516, 2928
KspAI GTTAAC 1 cut(s) 2529
LmnI GCTCC 1 cut(s) 425
Lsp1109I GCAGC 5 cut(s) 305, 308, 988, 1718, 1860
LweI GCATC 6 cut(s) 251, 1442, 1718, 1789, 1929, 2320
MaeII ACGT 1 cut(s) 2277
MaeIII GTNAC 7 cut(s) 79, 344, 591, 713, 814, 1190, 2683
MfeI CAATTG 1 cut(s) 1961
MflI RGATCY 8 cut(s) 656, 868, 1551, 1767, 2505, 2533, 2577, 2719
MhlI GDGCHC 2 cut(s) 1568, 2211
MlsI TGGCCA 1 cut(s) 752
MluNI TGGCCA 1 cut(s) 752
MlyI GAGTC 1 cut(s) 1115
MmeI TCCRAC 4 cut(s) 438, 972, 1698, 2899
Mox20I TGGCCA 1 cut(s) 752
MroI TCCGGA 2 cut(s) 2071, 2801
MroXI GAANNNNTTC 1 cut(s) 1583
MscI TGGCCA 1 cut(s) 752
MslI CAYNNNNRTG 1 cut(s) 1299
Msp20I TGGCCA 1 cut(s) 752
MspA1I CMGCKG 1 cut(s) 318
MspCI CTTAAG 1 cut(s) 1480
MspI CCGG 7 cut(s) 812, 1172, 1703, 2072, 2190, 2499, 2802
MspR9I CCNGG 2 cut(s) 812, 1764
MunI CAATTG 1 cut(s) 1961
Mva1269I GAATGC 1 cut(s) 1417
MvaI CCWGG 1 cut(s) 1764
MwoI GCNNNNNNNGC 3 cut(s) 1799, 2470, 2879
NciI CCSGG 1 cut(s) 812
NcoI CCATGG 3 cut(s) 747, 1684, 2110
NlaIV GGNNCC 8 cut(s) 658, 1176, 2108, 2147, 2285, 2507, 2662, 2800
NmuCI GTSAC 3 cut(s) 344, 591, 2683
NspI RCATGY 2 cut(s) 1008, 1681
NspV TTCGAA 2 cut(s) 1336, 2555
PaeI GCATGC 1 cut(s) 1008
PceI AGGCCT 1 cut(s) 2896
PciI ACATGT 1 cut(s) 1677
PcsI WCGNNNNNNNCGW 1 cut(s) 465
PctI GAATGC 1 cut(s) 1417
PdmI GAANNNNTTC 1 cut(s) 1583
PfeI GAWTC 9 cut(s) 505, 1027, 1282, 1397, 1828, 2017, 2309, 2380, 2540
PflMI CCANNNNNTGG 2 cut(s) 748, 2774
PinAI ACCGGT 1 cut(s) 2498
PkrI GCNGC 6 cut(s) 320, 323, 1003, 1708, 1875, 2097
PleI GAGTC 1 cut(s) 1114
PpsI GAGTC 1 cut(s) 1114
PpuMI RGGWCCY 1 cut(s) 2645
PscI ACATGT 1 cut(s) 1677
PshAI GACNNNNGTC 1 cut(s) 773
PshBI ATTAAT 1 cut(s) 975
PsiI TTATAA 1 cut(s) 2178
Psp5II RGGWCCY 1 cut(s) 2645
Psp6I CCWGG 1 cut(s) 1762
PspEI GGTNACC 1 cut(s) 79
PspFI CCCAGC 1 cut(s) 2755
PspGI CCWGG 1 cut(s) 1762
PspN4I GGNNCC 8 cut(s) 658, 1176, 2108, 2147, 2285, 2507, 2662, 2800
PspPI GGNCC 7 cut(s) 1169, 1174, 1688, 1792, 2548, 2645, 2799
PspPPI RGGWCCY 1 cut(s) 2645
PstNI CAGNNNCTG 1 cut(s) 321
PsuI RGATCY 8 cut(s) 656, 868, 1551, 1767, 2505, 2533, 2577, 2719
PvuII CAGCTG 1 cut(s) 318
RsaI GTAC 7 cut(s) 67, 88, 1315, 1511, 1542, 2285, 2868
RsaNI GTAC 7 cut(s) 66, 87, 1314, 1510, 1541, 2284, 2867
RseI CAYNNNNRTG 1 cut(s) 1299
SalI GTCGAC 1 cut(s) 776
SatI GCNGC 6 cut(s) 319, 322, 1002, 1707, 1874, 2096
Sau96I GGNCC 7 cut(s) 1169, 1174, 1688, 1792, 2548, 2645, 2799
ScaI AGTACT 2 cut(s) 67, 88
SchI GAGTC 1 cut(s) 1115
ScrFI CCNGG 2 cut(s) 812, 1764
SduI GDGCHC 2 cut(s) 1568, 2211
SfaNI GCATC 6 cut(s) 251, 1442, 1718, 1789, 1929, 2320
SfuI TTCGAA 2 cut(s) 1336, 2555
SgrAI CRCCGGYG 1 cut(s) 2498
SinI GGWCC 5 cut(s) 1169, 1174, 2548, 2645, 2799
SmiMI CAYNNNNRTG 1 cut(s) 1299
SmlI CTYRAG 6 cut(s) 297, 1277, 1480, 1933, 2006, 2035
SmoI CTYRAG 6 cut(s) 297, 1277, 1480, 1933, 2006, 2035
SpeI ACTAGT 2 cut(s) 1204, 1715
SphI GCATGC 1 cut(s) 1008
SseBI AGGCCT 1 cut(s) 2896
SsiI CCGC 6 cut(s) 141, 1588, 1832, 2095, 2706, 2873
StuI AGGCCT 1 cut(s) 2896
StyD4I CCNGG 2 cut(s) 810, 1762
StyI CCWWGG 6 cut(s) 747, 1531, 1591, 1640, 1684, 2110
TaaI ACNGT 8 cut(s) 579, 775, 1420, 1428, 1467, 2145, 2248, 2792
TaiI ACGT 1 cut(s) 2280
TaqI TCGA 8 cut(s) 528, 731, 777, 921, 1336, 1617, 2538, 2555
TatI WGTACW 2 cut(s) 65, 86
TauI GCSGC 1 cut(s) 2098
TfiI GAWTC 9 cut(s) 505, 1027, 1282, 1397, 1828, 2017, 2309, 2380, 2540
TscAI CASTG 7 cut(s) 23, 794, 1399, 1825, 1841, 2550, 2692
TseFI GTSAC 3 cut(s) 344, 591, 2683
TseI GCWGC 5 cut(s) 318, 321, 1001, 1706, 1873
Tsp45I GTSAC 3 cut(s) 344, 591, 2683
TspDTI ATGAA 7 cut(s) 917, 1212, 1283, 1424, 1740, 1883, 2454
TspGWI ACGGA 6 cut(s) 419, 532, 701, 1390, 2856, 2905
TspRI CASTG 7 cut(s) 23, 794, 1399, 1825, 1841, 2550, 2692
Van91I CCANNNNNTGG 2 cut(s) 748, 2774
Vha464I CTTAAG 1 cut(s) 1480
VpaK11BI GGWCC 5 cut(s) 1169, 1174, 2548, 2645, 2799
VspI ATTAAT 1 cut(s) 975
XapI RAATTY 8 cut(s) 486, 890, 1085, 1385, 1495, 2420, 2476, 2810
XbaI TCTAGA 2 cut(s) 694, 1066
XceI RCATGY 2 cut(s) 1008, 1681
XcmI CCANNNNNNNNNTGG 2 cut(s) 872, 2294
XmiI GTMKAC 1 cut(s) 777
XmnI GAANNNNTTC 1 cut(s) 1583
ZraI GACGTC 1 cut(s) 2278
ZrmI AGTACT 2 cut(s) 67, 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.