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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000001694 RLG00000001803 RLG00000007893 RLG00000010044 RLG00000022360 RLG00000022941 RLG00000028365 |
| rosa_multiflora | Rmu_sc0011772.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00316120 Rroxscaffold_7G00214530 |
| rosa_rugosa | Rorug01G0267700 Rorug04G0149900 |
| rosa_samantha | Rh1AG047500 Rh1DG148500 Rh1DG259400 Rh1DG276600 Rh1DG373800 Rh2AG039100 Rh2AG317500 Rh2AG317600 Rh2BG325800 Rh2BG325900 Rh2BG326000 Rh2CG318200 Rh2CG318300 Rh2CG318400 Rh3CG274500 Rh3CG354900 |
| rosa_wichuraiana | Rw2G025690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1364 |
| AccB1I | GGYRCC | 1 cut(s) | 1364 |
| AccI | GTMKAC | 1 cut(s) | 656 |
| AciI | CCGC | 1 cut(s) | 838 |
| AclWI | GGATC | 2 cut(s) | 736, 1471 |
| AcoI | YGGCCR | 1 cut(s) | 1489 |
| AcsI | RAATTY | 1 cut(s) | 1533 |
| AcuI | CTGAAG | 2 cut(s) | 1098, 1197 |
| AdeI | CACNNNGTG | 1 cut(s) | 434 |
| AfaI | GTAC | 4 cut(s) | 405, 735, 1240, 1366 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1487 |
| AflIII | ACRYGT | 1 cut(s) | 1692 |
| AjnI | CCWGG | 1 cut(s) | 1383 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 213, 245, 705, 737 |
| AluBI | AGCT | 5 cut(s) | 262, 543, 1564, 1584, 1788 |
| AluI | AGCT | 5 cut(s) | 262, 543, 1564, 1584, 1788 |
| Alw26I | GTCTC | 1 cut(s) | 824 |
| AlwI | GGATC | 2 cut(s) | 736, 1471 |
| Ama87I | CYCGRG | 1 cut(s) | 1765 |
| AoxI | GGCC | 2 cut(s) | 269, 1489 |
| ApeKI | GCWGC | 3 cut(s) | 1344, 1502, 1685 |
| ApoI | RAATTY | 1 cut(s) | 1533 |
| AseI | ATTAAT | 1 cut(s) | 1674 |
| Asp718I | GGTACC | 1 cut(s) | 1364 |
| AspLEI | GCGC | 1 cut(s) | 1151 |
| AsuC2I | CCSGG | 1 cut(s) | 1481 |
| AsuHPI | GGTGA | 2 cut(s) | 209, 1300 |
| AvaI | CYCGRG | 1 cut(s) | 1765 |
| AxyI | CCTNAGG | 1 cut(s) | 1284 |
| BaeGI | GKGCMC | 1 cut(s) | 578 |
| BanI | GGYRCC | 1 cut(s) | 1364 |
| BbvCI | CCTCAGC | 1 cut(s) | 438 |
| BbvI | GCAGC | 3 cut(s) | 1356, 1514, 1672 |
| BccI | CCATC | 4 cut(s) | 367, 380, 586, 1598 |
| BciT130I | CCWGG | 1 cut(s) | 1385 |
| BclI | TGATCA | 1 cut(s) | 598 |
| BcnI | CCSGG | 1 cut(s) | 1481 |
| BcoDI | GTCTC | 1 cut(s) | 824 |
| BfaI | CTAG | 2 cut(s) | 162, 1557 |
| BfoI | RGCGCY | 1 cut(s) | 1152 |
| BglII | AGATCT | 2 cut(s) | 24, 903 |
| BisI | GCNGC | 3 cut(s) | 1345, 1503, 1686 |
| BlpI | GCTNAGC | 1 cut(s) | 263 |
| BlsI | GCNGC | 3 cut(s) | 1346, 1504, 1687 |
| BmcAI | AGTACT | 1 cut(s) | 405 |
| Bme1390I | CCNGG | 2 cut(s) | 1385, 1481 |
| BmeT110I | CYCGRG | 1 cut(s) | 1765 |
| BmiI | GGNNCC | 2 cut(s) | 1366, 1389 |
| BmrFI | CCNGG | 2 cut(s) | 1385, 1481 |
| BmsI | GCATC | 2 cut(s) | 415, 593 |
| Bpu10I | CCTNAGC | 1 cut(s) | 438 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 263 |
| BpuEI | CTTGAG | 2 cut(s) | 149, 1386 |
| BpuMI | CCSGG | 1 cut(s) | 1481 |
| BsaJI | CCNNGG | 2 cut(s) | 862, 1300 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1487 |
| Bse1I | ACTGG | 1 cut(s) | 1268 |
| Bse21I | CCTNAGG | 1 cut(s) | 1284 |
| Bse3DI | GCAATG | 2 cut(s) | 257, 1527 |
| BseBI | CCWGG | 1 cut(s) | 1385 |
| BseDI | CCNNGG | 2 cut(s) | 862, 1300 |
| BseGI | GGATG | 3 cut(s) | 391, 1489, 1531 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1487 |
| BseMI | GCAATG | 2 cut(s) | 257, 1527 |
| BseMII | CTCAG | 4 cut(s) | 249, 429, 525, 1275 |
| BseNI | ACTGG | 1 cut(s) | 1268 |
| BseSI | GKGCMC | 1 cut(s) | 578 |
| BseXI | GCAGC | 3 cut(s) | 1356, 1514, 1672 |
| BshFI | GGCC | 2 cut(s) | 271, 1491 |
| BshNI | GGYRCC | 1 cut(s) | 1364 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1765 |
| BsiSI | CCGG | 1 cut(s) | 1481 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1487 |
| BsmAI | GTCTC | 1 cut(s) | 824 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| BsnI | GGCC | 2 cut(s) | 271, 1491 |
| BsoBI | CYCGRG | 1 cut(s) | 1765 |
| Bsp1286I | GDGCHC | 1 cut(s) | 578 |
| Bsp143I | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 263 |
| Bsp19I | CCATGG | 1 cut(s) | 862 |
| BspACI | CCGC | 1 cut(s) | 838 |
| BspANI | GGCC | 2 cut(s) | 271, 1491 |
| BspCNI | CTCAG | 4 cut(s) | 250, 430, 524, 1276 |
| BspLI | GGNNCC | 2 cut(s) | 1366, 1389 |
| BspPI | GGATC | 2 cut(s) | 736, 1471 |
| BspT107I | GGYRCC | 1 cut(s) | 1364 |
| BsrDI | GCAATG | 2 cut(s) | 257, 1527 |
| BsrI | ACTGG | 1 cut(s) | 1268 |
| BssECI | CCNNGG | 2 cut(s) | 862, 1300 |
| BssMI | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| BssT1I | CCWWGG | 1 cut(s) | 862 |
| Bst2UI | CCWGG | 1 cut(s) | 1385 |
| Bst4CI | ACNGT | 7 cut(s) | 568, 637, 738, 1003, 1301, 1329, 1369 |
| Bst6I | CTCTTC | 1 cut(s) | 459 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 434 |
| BstC8I | GCNNGC | 1 cut(s) | 269 |
| BstDEI | CTNAG | 7 cut(s) | 258, 263, 438, 511, 771, 1086, 1284 |
| BstDSI | CCRYGG | 2 cut(s) | 862, 1300 |
| BstF5I | GGATG | 3 cut(s) | 391, 1489, 1531 |
| BstH2I | RGCGCY | 1 cut(s) | 1152 |
| BstHHI | GCGC | 1 cut(s) | 1151 |
| BstKTI | GATC | 5 cut(s) | 27, 601, 731, 906, 1479 |
| BstMAI | GTCTC | 1 cut(s) | 824 |
| BstMBI | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 268, 434, 554, 1082 |
| BstNI | CCWGG | 1 cut(s) | 1385 |
| BstNSI | RCATGY | 4 cut(s) | 371, 1502, 1638, 1696 |
| BstSCI | CCNGG | 2 cut(s) | 1383, 1479 |
| BstSLI | GKGCMC | 1 cut(s) | 578 |
| BstV1I | GCAGC | 3 cut(s) | 1356, 1514, 1672 |
| BstX2I | RGATCY | 4 cut(s) | 24, 728, 903, 1476 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1588 |
| BstYI | RGATCY | 4 cut(s) | 24, 728, 903, 1476 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1284 |
| BsuRI | GGCC | 2 cut(s) | 271, 1491 |
| BtgI | CCRYGG | 2 cut(s) | 862, 1300 |
| BtsCI | GGATG | 3 cut(s) | 391, 1489, 1531 |
| BtsIMutI | CAGTG | 2 cut(s) | 255, 564 |
| Cac8I | GCNNGC | 1 cut(s) | 269 |
| CfoI | GCGC | 1 cut(s) | 1151 |
| Csp6I | GTAC | 4 cut(s) | 404, 734, 1239, 1365 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 632, 667 |
| CviQI | GTAC | 4 cut(s) | 404, 734, 1239, 1365 |
| DdeI | CTNAG | 7 cut(s) | 258, 263, 438, 511, 771, 1086, 1284 |
| DpnI | GATC | 5 cut(s) | 26, 600, 730, 905, 1478 |
| DpnII | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| DraIII | CACNNNGTG | 1 cut(s) | 434 |
| EaeI | YGGCCR | 1 cut(s) | 1489 |
| Eam1104I | CTCTTC | 1 cut(s) | 459 |
| EarI | CTCTTC | 1 cut(s) | 459 |
| Eco130I | CCWWGG | 1 cut(s) | 862 |
| Eco32I | GATATC | 1 cut(s) | 1630 |
| Eco57I | CTGAAG | 2 cut(s) | 1098, 1197 |
| Eco81I | CCTNAGG | 1 cut(s) | 1284 |
| Eco88I | CYCGRG | 1 cut(s) | 1765 |
| EcoRII | CCWGG | 1 cut(s) | 1383 |
| EcoRV | GATATC | 1 cut(s) | 1630 |
| EcoT14I | CCWWGG | 1 cut(s) | 862 |
| EcoT22I | ATGCAT | 1 cut(s) | 559 |
| ErhI | CCWWGG | 1 cut(s) | 862 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FbaI | TGATCA | 1 cut(s) | 598 |
| FblI | GTMKAC | 1 cut(s) | 656 |
| Fnu4HI | GCNGC | 3 cut(s) | 1345, 1503, 1686 |
| FokI | GGATG | 3 cut(s) | 398, 1496, 1538 |
| Fsp4HI | GCNGC | 3 cut(s) | 1345, 1503, 1686 |
| FspBI | CTAG | 2 cut(s) | 162, 1557 |
| GlaI | GCGC | 1 cut(s) | 1150 |
| GluI | GCNGC | 3 cut(s) | 1345, 1503, 1686 |
| HaeII | RGCGCY | 1 cut(s) | 1152 |
| HaeIII | GGCC | 2 cut(s) | 271, 1491 |
| HapII | CCGG | 1 cut(s) | 1481 |
| HhaI | GCGC | 1 cut(s) | 1151 |
| Hin6I | GCGC | 1 cut(s) | 1149 |
| HinP1I | GCGC | 1 cut(s) | 1149 |
| HincII | GTYRAC | 3 cut(s) | 138, 281, 1325 |
| HindII | GTYRAC | 3 cut(s) | 138, 281, 1325 |
| HinfI | GANTC | 9 cut(s) | 74, 509, 781, 974, 1060, 1172, 1220, 1321, 1577 |
| HpaII | CCGG | 1 cut(s) | 1481 |
| HphI | GGTGA | 2 cut(s) | 209, 1300 |
| Hpy166II | GTNNAC | 6 cut(s) | 138, 281, 657, 859, 1241, 1325 |
| Hpy188I | TCNGA | 8 cut(s) | 345, 358, 514, 603, 988, 1177, 1213, 1333 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 700 |
| Hpy8I | GTNNAC | 6 cut(s) | 138, 281, 657, 859, 1241, 1325 |
| HpyAV | CCTTC | 8 cut(s) | 463, 511, 677, 680, 707, 1042, 1172, 1218 |
| HpyCH4III | ACNGT | 7 cut(s) | 568, 637, 738, 1003, 1301, 1329, 1369 |
| HpyCH4IV | ACGT | 1 cut(s) | 430 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 268, 434, 554, 1082 |
| HpyF3I | CTNAG | 7 cut(s) | 258, 263, 438, 511, 771, 1086, 1284 |
| HpySE526I | ACGT | 1 cut(s) | 430 |
| HspAI | GCGC | 1 cut(s) | 1149 |
| KpnI | GGTACC | 1 cut(s) | 1368 |
| Ksp22I | TGATCA | 1 cut(s) | 598 |
| Kzo9I | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| LmnI | GCTCC | 2 cut(s) | 1051, 1393 |
| Lsp1109I | GCAGC | 3 cut(s) | 1356, 1514, 1672 |
| LweI | GCATC | 2 cut(s) | 415, 593 |
| MaeI | CTAG | 2 cut(s) | 162, 1557 |
| MaeII | ACGT | 1 cut(s) | 430 |
| MaeIII | GTNAC | 1 cut(s) | 186 |
| MalI | GATC | 5 cut(s) | 26, 600, 730, 905, 1478 |
| MboI | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| MboII | GAAGA | 9 cut(s) | 31, 34, 345, 434, 476, 508, 935, 1387, 1714 |
| MflI | RGATCY | 4 cut(s) | 24, 728, 903, 1476 |
| MhlI | GDGCHC | 1 cut(s) | 578 |
| MlyI | GAGTC | 4 cut(s) | 68, 503, 1330, 1586 |
| MmeI | TCCRAC | 3 cut(s) | 84, 985, 1005 |
| Mph1103I | ATGCAT | 1 cut(s) | 559 |
| MseI | TTAA | 8 cut(s) | 239, 381, 608, 690, 846, 873, 1674, 1792 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1737 |
| MspI | CCGG | 1 cut(s) | 1481 |
| MspR9I | CCNGG | 2 cut(s) | 1385, 1481 |
| MvaI | CCWGG | 1 cut(s) | 1385 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 268, 434, 554, 1082 |
| NciI | CCSGG | 1 cut(s) | 1481 |
| NcoI | CCATGG | 1 cut(s) | 862 |
| NdeII | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| NlaIV | GGNNCC | 2 cut(s) | 1366, 1389 |
| NmuCI | GTSAC | 1 cut(s) | 186 |
| NsiI | ATGCAT | 1 cut(s) | 559 |
| NspI | RCATGY | 4 cut(s) | 371, 1502, 1638, 1696 |
| PaeR7I | CTCGAG | 1 cut(s) | 1765 |
| PciI | ACATGT | 1 cut(s) | 1692 |
| PfeI | GAWTC | 5 cut(s) | 781, 974, 1060, 1172, 1220 |
| PfoI | TCCNGGA | 1 cut(s) | 1479 |
| PkrI | GCNGC | 3 cut(s) | 1346, 1504, 1687 |
| PleI | GAGTC | 4 cut(s) | 68, 503, 1329, 1585 |
| PpsI | GAGTC | 4 cut(s) | 68, 503, 1329, 1585 |
| PscI | ACATGT | 1 cut(s) | 1692 |
| PshBI | ATTAAT | 1 cut(s) | 1674 |
| Psp6I | CCWGG | 1 cut(s) | 1383 |
| PspGI | CCWGG | 1 cut(s) | 1383 |
| PspN4I | GGNNCC | 2 cut(s) | 1366, 1389 |
| PspXI | VCTCGAGB | 1 cut(s) | 1765 |
| PsuI | RGATCY | 4 cut(s) | 24, 728, 903, 1476 |
| RsaI | GTAC | 4 cut(s) | 405, 735, 1240, 1366 |
| RsaNI | GTAC | 4 cut(s) | 404, 734, 1239, 1365 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1737 |
| SaqAI | TTAA | 8 cut(s) | 239, 381, 608, 690, 846, 873, 1674, 1792 |
| SatI | GCNGC | 3 cut(s) | 1345, 1503, 1686 |
| Sau3AI | GATC | 5 cut(s) | 24, 598, 728, 903, 1476 |
| ScaI | AGTACT | 1 cut(s) | 405 |
| SchI | GAGTC | 4 cut(s) | 68, 503, 1330, 1586 |
| ScrFI | CCNGG | 2 cut(s) | 1385, 1481 |
| SduI | GDGCHC | 1 cut(s) | 578 |
| SfaNI | GCATC | 2 cut(s) | 415, 593 |
| Sfr274I | CTCGAG | 1 cut(s) | 1765 |
| SlaI | CTCGAG | 1 cut(s) | 1765 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1737 |
| SmlI | CTYRAG | 3 cut(s) | 128, 1401, 1765 |
| SmoI | CTYRAG | 3 cut(s) | 128, 1401, 1765 |
| SsiI | CCGC | 1 cut(s) | 838 |
| SspI | AATATT | 2 cut(s) | 488, 1069 |
| SspMI | CTAG | 2 cut(s) | 162, 1557 |
| StyD4I | CCNGG | 2 cut(s) | 1383, 1479 |
| StyI | CCWWGG | 1 cut(s) | 862 |
| TaaI | ACNGT | 7 cut(s) | 568, 637, 738, 1003, 1301, 1329, 1369 |
| TaiI | ACGT | 1 cut(s) | 433 |
| TaqI | TCGA | 5 cut(s) | 34, 483, 1621, 1662, 1766 |
| TatI | WGTACW | 2 cut(s) | 403, 733 |
| TfiI | GAWTC | 5 cut(s) | 781, 974, 1060, 1172, 1220 |
| Tru1I | TTAA | 8 cut(s) | 239, 381, 608, 690, 846, 873, 1674, 1792 |
| Tru9I | TTAA | 8 cut(s) | 239, 381, 608, 690, 846, 873, 1674, 1792 |
| TscAI | CASTG | 2 cut(s) | 262, 571 |
| TseFI | GTSAC | 1 cut(s) | 186 |
| TseI | GCWGC | 3 cut(s) | 1344, 1502, 1685 |
| Tsp45I | GTSAC | 1 cut(s) | 186 |
| TspRI | CASTG | 2 cut(s) | 262, 571 |
| VspI | ATTAAT | 1 cut(s) | 1674 |
| XapI | RAATTY | 1 cut(s) | 1533 |
| XceI | RCATGY | 4 cut(s) | 371, 1502, 1638, 1696 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 220 |
| XhoI | CTCGAG | 1 cut(s) | 1765 |
| XmiI | GTMKAC | 1 cut(s) | 656 |
| XspI | CTAG | 2 cut(s) | 162, 1557 |
| ZrmI | AGTACT | 1 cut(s) | 405 |
| Zsp2I | ATGCAT | 1 cut(s) | 559 |