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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000001694 RLG00000001803 RLG00000007893 RLG00000010044 RLG00000022360 RLG00000022941 RLG00000028365 |
| rosa_multiflora | Rmu_sc0011772.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00316120 Rroxscaffold_7G00214530 |
| rosa_rugosa | Rorug01G0267700 Rorug04G0149900 |
| rosa_samantha | Rh1AG047500 Rh1DG148500 Rh1DG259400 Rh1DG276600 Rh1DG373800 Rh2AG039100 Rh2AG317500 Rh2AG317600 Rh2BG325800 Rh2BG325900 Rh2BG326000 Rh2CG318200 Rh2CG318300 Rh2CG318400 Rh3CG274500 Rh3CG354900 |
| rosa_wichuraiana | Rw2G025690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 656 |
| AciI | CCGC | 1 cut(s) | 838 |
| AclWI | GGATC | 1 cut(s) | 736 |
| AdeI | CACNNNGTG | 1 cut(s) | 434 |
| AfaI | GTAC | 2 cut(s) | 405, 735 |
| AgsI | TTSAA | 5 cut(s) | 422, 535, 674, 781, 791 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 213, 245, 705, 737 |
| AluBI | AGCT | 2 cut(s) | 262, 543 |
| AluI | AGCT | 2 cut(s) | 262, 543 |
| Alw26I | GTCTC | 1 cut(s) | 824 |
| AlwI | GGATC | 1 cut(s) | 736 |
| AoxI | GGCC | 1 cut(s) | 269 |
| BaeGI | GKGCMC | 1 cut(s) | 578 |
| BbvCI | CCTCAGC | 1 cut(s) | 438 |
| BccI | CCATC | 3 cut(s) | 367, 380, 586 |
| BclI | TGATCA | 1 cut(s) | 598 |
| BcoDI | GTCTC | 1 cut(s) | 824 |
| BfaI | CTAG | 1 cut(s) | 162 |
| BglII | AGATCT | 1 cut(s) | 24 |
| BlpI | GCTNAGC | 1 cut(s) | 263 |
| BmcAI | AGTACT | 1 cut(s) | 405 |
| BmsI | GCATC | 3 cut(s) | 73, 415, 593 |
| Bpu10I | CCTNAGC | 1 cut(s) | 438 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 263 |
| BpuEI | CTTGAG | 1 cut(s) | 149 |
| Bse3DI | GCAATG | 1 cut(s) | 257 |
| BseGI | GGATG | 1 cut(s) | 391 |
| BseMI | GCAATG | 1 cut(s) | 257 |
| BseMII | CTCAG | 3 cut(s) | 249, 429, 525 |
| BseSI | GKGCMC | 1 cut(s) | 578 |
| BshFI | GGCC | 1 cut(s) | 271 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BsmAI | GTCTC | 1 cut(s) | 824 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| BsnI | GGCC | 1 cut(s) | 271 |
| Bsp1286I | GDGCHC | 1 cut(s) | 578 |
| Bsp143I | GATC | 3 cut(s) | 24, 598, 728 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 263 |
| BspACI | CCGC | 1 cut(s) | 838 |
| BspANI | GGCC | 1 cut(s) | 271 |
| BspCNI | CTCAG | 3 cut(s) | 250, 430, 524 |
| BspPI | GGATC | 1 cut(s) | 736 |
| BsrDI | GCAATG | 1 cut(s) | 257 |
| BssMI | GATC | 3 cut(s) | 24, 598, 728 |
| Bst4CI | ACNGT | 3 cut(s) | 568, 637, 738 |
| Bst6I | CTCTTC | 1 cut(s) | 459 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 434 |
| BstC8I | GCNNGC | 1 cut(s) | 269 |
| BstDEI | CTNAG | 5 cut(s) | 258, 263, 438, 511, 771 |
| BstF5I | GGATG | 1 cut(s) | 391 |
| BstKTI | GATC | 3 cut(s) | 27, 601, 731 |
| BstMAI | GTCTC | 1 cut(s) | 824 |
| BstMBI | GATC | 3 cut(s) | 24, 598, 728 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 268, 434, 554 |
| BstNSI | RCATGY | 1 cut(s) | 371 |
| BstSLI | GKGCMC | 1 cut(s) | 578 |
| BstX2I | RGATCY | 2 cut(s) | 24, 728 |
| BstYI | RGATCY | 2 cut(s) | 24, 728 |
| BsuRI | GGCC | 1 cut(s) | 271 |
| BtsCI | GGATG | 1 cut(s) | 391 |
| BtsIMutI | CAGTG | 2 cut(s) | 255, 564 |
| Cac8I | GCNNGC | 1 cut(s) | 269 |
| Csp6I | GTAC | 2 cut(s) | 404, 734 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 632, 667 |
| CviAII | CATG | 6 cut(s) | 172, 329, 368, 629, 785, 816 |
| CviJI | RGCY | 6 cut(s) | 115, 262, 271, 308, 521, 543 |
| CviKI_1 | RGCY | 6 cut(s) | 115, 262, 271, 308, 521, 543 |
| CviQI | GTAC | 2 cut(s) | 404, 734 |
| DdeI | CTNAG | 5 cut(s) | 258, 263, 438, 511, 771 |
| DpnI | GATC | 3 cut(s) | 26, 600, 730 |
| DpnII | GATC | 3 cut(s) | 24, 598, 728 |
| DraIII | CACNNNGTG | 1 cut(s) | 434 |
| Eam1104I | CTCTTC | 1 cut(s) | 459 |
| EarI | CTCTTC | 1 cut(s) | 459 |
| EcoT22I | ATGCAT | 1 cut(s) | 559 |
| FaeI | CATG | 6 cut(s) | 175, 332, 371, 632, 788, 819 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FatI | CATG | 6 cut(s) | 171, 328, 367, 628, 784, 815 |
| FbaI | TGATCA | 1 cut(s) | 598 |
| FblI | GTMKAC | 1 cut(s) | 656 |
| FokI | GGATG | 1 cut(s) | 398 |
| FspBI | CTAG | 1 cut(s) | 162 |
| HaeIII | GGCC | 1 cut(s) | 271 |
| Hin1II | CATG | 6 cut(s) | 175, 332, 371, 632, 788, 819 |
| HincII | GTYRAC | 2 cut(s) | 138, 281 |
| HindII | GTYRAC | 2 cut(s) | 138, 281 |
| HinfI | GANTC | 3 cut(s) | 74, 509, 781 |
| Hpy166II | GTNNAC | 3 cut(s) | 138, 281, 657 |
| Hpy188I | TCNGA | 4 cut(s) | 345, 358, 514, 603 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 700 |
| Hpy8I | GTNNAC | 3 cut(s) | 138, 281, 657 |
| HpyAV | CCTTC | 5 cut(s) | 463, 511, 677, 680, 707 |
| HpyCH4III | ACNGT | 3 cut(s) | 568, 637, 738 |
| HpyCH4IV | ACGT | 1 cut(s) | 430 |
| HpyCH4V | TGCA | 7 cut(s) | 156, 250, 255, 428, 557, 745, 815 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 268, 434, 554 |
| HpyF3I | CTNAG | 5 cut(s) | 258, 263, 438, 511, 771 |
| HpySE526I | ACGT | 1 cut(s) | 430 |
| Hsp92II | CATG | 6 cut(s) | 175, 332, 371, 632, 788, 819 |
| Ksp22I | TGATCA | 1 cut(s) | 598 |
| Kzo9I | GATC | 3 cut(s) | 24, 598, 728 |
| LpnPI | CCDG | 4 cut(s) | 101, 180, 253, 713 |
| LweI | GCATC | 3 cut(s) | 73, 415, 593 |
| MaeI | CTAG | 1 cut(s) | 162 |
| MaeII | ACGT | 1 cut(s) | 430 |
| MaeIII | GTNAC | 1 cut(s) | 186 |
| MalI | GATC | 3 cut(s) | 26, 600, 730 |
| MboI | GATC | 3 cut(s) | 24, 598, 728 |
| MboII | GAAGA | 6 cut(s) | 31, 34, 345, 434, 476, 508 |
| MflI | RGATCY | 2 cut(s) | 24, 728 |
| MhlI | GDGCHC | 1 cut(s) | 578 |
| MluCI | AATT | 6 cut(s) | 151, 244, 378, 449, 537, 649 |
| MlyI | GAGTC | 2 cut(s) | 68, 503 |
| MmeI | TCCRAC | 1 cut(s) | 84 |
| MnlI | CCTC | 6 cut(s) | 42, 55, 383, 433, 486, 768 |
| Mph1103I | ATGCAT | 1 cut(s) | 559 |
| MseI | TTAA | 5 cut(s) | 239, 381, 608, 690, 847 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 268, 434, 554 |
| NdeII | GATC | 3 cut(s) | 24, 598, 728 |
| NlaIII | CATG | 6 cut(s) | 175, 332, 371, 632, 788, 819 |
| NmuCI | GTSAC | 1 cut(s) | 186 |
| NsiI | ATGCAT | 1 cut(s) | 559 |
| NspI | RCATGY | 1 cut(s) | 371 |
| PfeI | GAWTC | 1 cut(s) | 781 |
| PleI | GAGTC | 2 cut(s) | 68, 503 |
| PpsI | GAGTC | 2 cut(s) | 68, 503 |
| PsuI | RGATCY | 2 cut(s) | 24, 728 |
| RsaI | GTAC | 2 cut(s) | 405, 735 |
| RsaNI | GTAC | 2 cut(s) | 404, 734 |
| SaqAI | TTAA | 5 cut(s) | 239, 381, 608, 690, 847 |
| Sau3AI | GATC | 3 cut(s) | 24, 598, 728 |
| ScaI | AGTACT | 1 cut(s) | 405 |
| SchI | GAGTC | 2 cut(s) | 68, 503 |
| SduI | GDGCHC | 1 cut(s) | 578 |
| SetI | ASST | 9 cut(s) | 66, 129, 199, 264, 433, 444, 545, 688, 779 |
| SfaNI | GCATC | 3 cut(s) | 73, 415, 593 |
| SmlI | CTYRAG | 1 cut(s) | 128 |
| SmoI | CTYRAG | 1 cut(s) | 128 |
| Sse9I | AATT | 6 cut(s) | 151, 244, 378, 449, 537, 649 |
| SsiI | CCGC | 1 cut(s) | 838 |
| SspI | AATATT | 1 cut(s) | 488 |
| SspMI | CTAG | 1 cut(s) | 162 |
| TaaI | ACNGT | 3 cut(s) | 568, 637, 738 |
| TaiI | ACGT | 1 cut(s) | 433 |
| TaqI | TCGA | 2 cut(s) | 34, 483 |
| TasI | AATT | 6 cut(s) | 151, 244, 378, 449, 537, 649 |
| TatI | WGTACW | 2 cut(s) | 403, 733 |
| TfiI | GAWTC | 1 cut(s) | 781 |
| Tru1I | TTAA | 5 cut(s) | 239, 381, 608, 690, 847 |
| Tru9I | TTAA | 5 cut(s) | 239, 381, 608, 690, 847 |
| TscAI | CASTG | 2 cut(s) | 262, 571 |
| TseFI | GTSAC | 1 cut(s) | 186 |
| Tsp45I | GTSAC | 1 cut(s) | 186 |
| TspDTI | ATGAA | 4 cut(s) | 20, 160, 197, 426 |
| TspRI | CASTG | 2 cut(s) | 262, 571 |
| XceI | RCATGY | 1 cut(s) | 371 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 220 |
| XmiI | GTMKAC | 1 cut(s) | 656 |
| XspI | CTAG | 1 cut(s) | 162 |
| ZrmI | AGTACT | 1 cut(s) | 405 |
| Zsp2I | ATGCAT | 1 cut(s) | 559 |