Rh2AG134900

Ras-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0005599
Physical Location & Seq
Reverse (-)
12231670 .. 12233113
1444 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG134900.1

Sequence Viewer

Length: 321 bp
ATGCATTTATGGAATGCTAAGCCACTCATACTGATAAGATGGCATTTTCGTTTTAATCACTTGGCTAGCTGGCTAGAGGATGCGAGGCAGCATGCAAATGCAAACATGACCATAATGTTAATTGGTAGTAAGTGTGATCTTGCTCGTAGACGAGCTGTGAGCACAGAGGAAGGGGAGCAATTTGCAAAGGAACATCGATTGATCTTCATGGAGGCGTCTGCTAAAACTGCCCAGAATGTTGAGGAGGCATTCATAAAAACCGCTGCAACCATGTACAAGAAGATTCAAGATGGCGTTTTTGATGTATCAAATGAGGCTTGA

Protein Analysis

106

Amino Acids

12.25

Weight (kDa)

7.96

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ras PF00071 17 - 92 1.3e-21 Ras family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 148
AciI CCGC 1 cut(s) 261
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 1 cut(s) 275
AgsI TTSAA 1 cut(s) 287
AluBI AGCT 2 cut(s) 69, 155
AluI AGCT 2 cut(s) 69, 155
Alw21I GWGCWC 1 cut(s) 164
ApeKI GCWGC 2 cut(s) 88, 263
AsuNHI GCTAGC 1 cut(s) 65
Bbv12I GWGCWC 1 cut(s) 164
BbvI GCAGC 2 cut(s) 100, 250
BccI CCATC 2 cut(s) 33, 284
BfaI CTAG 2 cut(s) 66, 74
BisI GCNGC 2 cut(s) 89, 264
BlpI GCTNAGC 1 cut(s) 18
BlsI GCNGC 2 cut(s) 90, 265
BmsI GCATC 1 cut(s) 70
BmtI GCTAGC 1 cut(s) 69
Bpu1102I GCTNAGC 1 cut(s) 18
Bsa29I ATCGAT 1 cut(s) 196
BsaHI GRCGYC 1 cut(s) 215
BseCI ATCGAT 1 cut(s) 196
BseGI GGATG 1 cut(s) 85
BseRI GAGGAG 1 cut(s) 257
BseXI GCAGC 2 cut(s) 100, 250
BshVI ATCGAT 1 cut(s) 196
BsiHKAI GWGCWC 1 cut(s) 164
BsmI GAATGC 2 cut(s) 19, 248
Bsp1286I GDGCHC 1 cut(s) 164
Bsp1407I TGTACA 1 cut(s) 273
Bsp143I GATC 2 cut(s) 136, 201
Bsp1720I GCTNAGC 1 cut(s) 18
BspACI CCGC 1 cut(s) 261
BspDI ATCGAT 1 cut(s) 196
BspOI GCTAGC 1 cut(s) 69
BsrGI TGTACA 1 cut(s) 273
BssMI GATC 2 cut(s) 136, 201
BssNI GRCGYC 1 cut(s) 215
BstACI GRCGYC 1 cut(s) 215
BstAUI TGTACA 1 cut(s) 273
BstC8I GCNNGC 3 cut(s) 67, 71, 93
BstDEI CTNAG 1 cut(s) 18
BstF5I GGATG 1 cut(s) 85
BstKTI GATC 2 cut(s) 139, 204
BstMBI GATC 2 cut(s) 136, 201
BstMWI GCNNNNNNNGC 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 95
BstV1I GCAGC 2 cut(s) 100, 250
Bsu15I ATCGAT 1 cut(s) 196
BsuTUI ATCGAT 1 cut(s) 196
BtsCI GGATG 1 cut(s) 85
Cac8I GCNNGC 3 cut(s) 67, 71, 93
ClaI ATCGAT 1 cut(s) 196
CseI GACGC 1 cut(s) 204
Csp6I GTAC 1 cut(s) 274
CviAII CATG 4 cut(s) 92, 106, 208, 271
CviJI RGCY 6 cut(s) 22, 65, 69, 73, 155, 317
CviKI_1 RGCY 6 cut(s) 22, 65, 69, 73, 155, 317
CviQI GTAC 1 cut(s) 274
DdeI CTNAG 1 cut(s) 18
DpnI GATC 2 cut(s) 138, 203
DpnII GATC 2 cut(s) 136, 201
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 4 cut(s) 95, 109, 211, 274
FaiI YATR 8 cut(s) 10, 29, 93, 107, 113, 209, 254, 272
FatI CATG 4 cut(s) 91, 105, 207, 270
FblI GTMKAC 1 cut(s) 148
Fnu4HI GCNGC 2 cut(s) 89, 264
FokI GGATG 1 cut(s) 92
Fsp4HI GCNGC 2 cut(s) 89, 264
FspBI CTAG 2 cut(s) 66, 74
GluI GCNGC 2 cut(s) 89, 264
HgaI GACGC 1 cut(s) 204
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 4 cut(s) 95, 109, 211, 274
HinfI GANTC 1 cut(s) 283
Hpy166II GTNNAC 1 cut(s) 149
Hpy188III TCNNGA 1 cut(s) 287
Hpy8I GTNNAC 1 cut(s) 149
HpyAV CCTTC 1 cut(s) 164
HpyCH4V TGCA 5 cut(s) 4, 95, 101, 185, 266
HpyF10VI GCNNNNNNNGC 1 cut(s) 227
HpyF3I CTNAG 1 cut(s) 18
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 4 cut(s) 95, 109, 211, 274
Kzo9I GATC 2 cut(s) 136, 201
LmnI GCTCC 1 cut(s) 175
LpnPI CCDG 2 cut(s) 55, 245
Lsp1109I GCAGC 2 cut(s) 100, 250
LweI GCATC 1 cut(s) 70
MaeI CTAG 2 cut(s) 66, 74
MalI GATC 2 cut(s) 138, 203
MboI GATC 2 cut(s) 136, 201
MboII GAAGA 2 cut(s) 196, 292
MhlI GDGCHC 1 cut(s) 164
MluCI AATT 2 cut(s) 120, 179
MnlI CCTC 7 cut(s) 70, 78, 160, 205, 235, 238, 307
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 2 cut(s) 54, 119
MslI CAYNNNNRTG 1 cut(s) 96
MspA1I CMGCKG 1 cut(s) 263
Mva1269I GAATGC 2 cut(s) 19, 248
MwoI GCNNNNNNNGC 1 cut(s) 227
NdeII GATC 2 cut(s) 136, 201
NheI GCTAGC 1 cut(s) 65
NlaIII CATG 4 cut(s) 95, 109, 211, 274
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 95
PaeI GCATGC 1 cut(s) 95
PctI GAATGC 2 cut(s) 19, 248
PfeI GAWTC 1 cut(s) 283
PkrI GCNGC 2 cut(s) 90, 265
RsaI GTAC 1 cut(s) 275
RsaNI GTAC 1 cut(s) 274
RseI CAYNNNNRTG 1 cut(s) 96
SaqAI TTAA 2 cut(s) 54, 119
SatI GCNGC 2 cut(s) 89, 264
Sau3AI GATC 2 cut(s) 136, 201
SduI GDGCHC 1 cut(s) 164
SetI ASST 2 cut(s) 71, 157
SfaNI GCATC 1 cut(s) 70
SmiMI CAYNNNNRTG 1 cut(s) 96
SphI GCATGC 1 cut(s) 95
Sse9I AATT 2 cut(s) 120, 179
SsiI CCGC 1 cut(s) 261
SspMI CTAG 2 cut(s) 66, 74
TaqI TCGA 1 cut(s) 196
TasI AATT 2 cut(s) 120, 179
TatI WGTACW 1 cut(s) 273
TfiI GAWTC 1 cut(s) 283
Tru1I TTAA 2 cut(s) 54, 119
Tru9I TTAA 2 cut(s) 54, 119
TseI GCWGC 2 cut(s) 88, 263
TspDTI ATGAA 2 cut(s) 196, 241
XceI RCATGY 1 cut(s) 95
XmiI GTMKAC 1 cut(s) 148
XspI CTAG 2 cut(s) 66, 74
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.