Rorug04G0382500

Raffinose synthase or seed imbibition protein Sip1

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
55338520 .. 55344157
5638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0382500.1

Sequence Viewer

Length: 2880 bp
ATGGCGAAGAAGAAGTCCGGCCCAAACGCCGTAGCCATGAAGCACCAGTCCCCAAAATCCAACCCTTTCGCAGCCAAATCGCCAAAGCTCAGTCGCTCCGACGACAACGCCACCACCAAGGAGACGAAGAAGAAGAAGAAGAACAGTAAACTAGGACCCAAGGCGATGGCTATGAAGGTCCAGCCCCCGAAACCCAACCCCTTCGAGACCATATGGTCCCGGAGGAAATTCGACGTCCTCGGAAAGAAGCGCAAAGGCGAAGAGCGCCGTATGGGCCTCGCTCGCTCTCAGGCCATCGAAAAGAGGAAGAAGACACTGTTGAAGGAGTACGAGCAGAGCGGGAAATCTTCGGTTTTTGTGGATAAGCGAATCGGAGAGGAAAATGATGAGCTTGATGAGTTTGATAAGGCCATTCGGCGTACTCAGCGCGAGCGACAATTGAAGCAAAGCAAGAAAAGCAAGTATAACTTATCAGATGGAGAGGAGGACGAGTTTGAGTTTCAGAGTCTTGGTGCATTGTCTCAGAGGGATGATTTTGAGGATGATATGCCGCCCGAAGAGGACGAAGATGATGACGGTGGAGAAAGTGGTAAAAAAAGTTATCAATTTAATTCCGAGGATAAGGACGGGGATCTAAGTGACGGAAATGAAAATAGGCATAAAAGTGACAAGGAAAGATATGCTGAAATGATCTTAAAGTCCAAAAATTACAAGGCAGAAAAATCAAAGGAGAAGGATGAAAACAAAGATTTGATGGAAGAATTGGACAAAAAGTTCACCTCTGTAATTGCCTCAAAAGCTCTTACAAACAAGAGCTTCTCAACCGAATATATGAAGAAGCATGAGGTTTCTGCTACTCAAATCTTTGGAACTTCTGAGCAAGAGAAATCGGACTCTTATGATAAACTTGAAAGAGAATTGGCAATGGAAAGGCGTGCTCAACCCTCAAATAGGACAAAGACTCCTGAAGAGATAGCACAAGAAGAGAGGGAGCAACTTGAACGATTGGAGGAAGAGAGACAGAAAAGGATGCATCCCACTGATGACTATAGTGATGAAGACATTGAAGACGCTGAGAAACCATCTACGCTGAGGCCAAGATCTATATCTGGAGATGATCTTGGTGATTCCTTCTCGCTTGAGGAAGAACCAAGGACTAAAAAGGGTTGGGTTGATGAGATTCTCGAACGAAAAGATGCTAGTGATTCTGAGAGTGAAGGAGATGATTCTGGTTCTTCTGAGGATTCAGAAAGTCCTGAAGATTATGGTGATGAGGGATCTGATGAAGATGATAGTGAAGGGGAAAGAGATATATTGAATAAGGACTGGGAACAGAGTGATGATGATAATCTTGACGTAGACTTCGATGATGAAGAAGAAGACTCTGACGAACATGAAAAGGATGACGAGGCTTATCAAAAAGAGCTGGAGCCAAGAGATCTGAAAAGGTTGAAAAGAAATGATGCTGTTCAAGCTAGTAAAAGTGATGATAAATCTTTAGGTGCAAAGAAATTACCAGCCAATAAACAATCTTCAACTCAGTCAGACCTCCCATACCTAATTGAAGCTCCAAAAAGCATGGAAGAGTTGGATGCTTTATTGGATAATCTTTCTAGTGCTGACATTGCCTTGATAATCCATCGAATCCGGGCAAGCAATGCAATCAAGCTTGCAGCAGAAAATAAGAAGAAAATGCAAGTATTTTATGGTTTACTTTTGCAATATTTTGCCACCTTAGCAAATAAAAAACCGCTGAATTTGGAATTACTAAATTTGCTGGTTAAGCCCTTGATGGAGATGAGCATGGAGACTCCGTATTTTGCTTCAATCTGTGCTCGTGAGAGGATACTACGCACTAGAACAAAATTTTGTGAGACTGTTAAGAACCCAGCAGAAAGTAGTTGTTGGCCTGCTTCAAAGACATTATTTCTCTTGAGGCTTTGGTCCCTGATATTTCCATGTTCAGACTTTCGTCATGTGGTCATGACTCCGGCAATATTTTTAATGTGTGAATATCTGACGCGTTGTCCCGTCTTGTCTGGTCGTGATGTTGCAGTTGGCTCGTTCTTATGCTCTCTGCTTCTTTCTATCACTAAGCAATCTCGGAAGTTCTGTCCTGAAGCAGTCACGTTTCTTCAAACATTGTTAAGGGCGGCCAAAGAGAGAAAGCCAAAGTCAACTCAAGATTCTGAGATTGATCATCTTATGGAATTAAAAGCACCCAGACCCCTTCTATATATACATGAATGTATAAATCGGATTGATCCACTTAATTTTCTCACAATTATGGACCTGCCAGAAGACTCTTTATTTTTCACCTCCGACAATTTCAGGTCTAGTGTGCTGGTGACTGTGATTGAAACTCTACGTGGATATGTCGGTATTTACGAAGGATTCAGTTCTTTCCCCGAAATGTTTTTGCCGATTTCAACATTGGTGCTTGAATTGTCGGAACAAGAAAATATGCCAAGTGCATTAACTGACAAATTTAAAGAGGTTGCTGAACTGATTAAGACAAAAGCAGATAAACACTGCATGCAGCGGCAACCACTTCAGATGCGGAAGCAAAAGCCAGTGGCTATTAAAATGCTTAATCCAAAATTTGAGGAGAACTTTGTCAAGGGCAGAGACTACGATCCAGACCGTGAACGGGTTGAGAGAAAGAAGTTGAAGAAGCGTTTGACACAAGAAGGTAAAGGTGCTGTTCGTGAACTGCGTAAAGATAATTATTTCTTACAGGAGCTGAAGTCGAGGGATAAGGCTCTGATGGAAGAAGAAAGAGCTGAGAAATATGGAAAAGCAAGACTTTTCCTTCAAGAGCAAGAACATGCTATGAAATCTGGGCAATTAGGAAAAGGCAGGGGGAAGAGAAGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

959

Amino Acids

110.49

Weight (kDa)

5.54

Isoelectric Point (pI)

55.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop14 PF04147 64 - 943 1.5e-227 Nop14-like family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 214
AatII GACGTC 1 cut(s) 237
Acc36I ACCTGC 1 cut(s) 2301
AccBSI CCGCTC 1 cut(s) 339
AccI GTMKAC 1 cut(s) 1359
AccII CGCG 2 cut(s) 429, 2023
AciI CCGC 6 cut(s) 339, 551, 1751, 2153, 2542, 2560
AclWI GGATC 4 cut(s) 639, 1285, 2258, 2630
AcoI YGGCCR 1 cut(s) 2154
AcsI RAATTY 6 cut(s) 227, 1756, 1771, 1865, 2486, 2600
AcuI CTGAAG 5 cut(s) 987, 1278, 2139, 2537, 2765
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 2 cut(s) 329, 421
AfiI CCNNNNNNNGG 2 cut(s) 951, 2650
AflIII ACRYGT 1 cut(s) 2021
AhdI GACNNNNNGTC 1 cut(s) 2025
AloI GAACNNNNNNTCC 2 cut(s) 758, 790
Alw21I GWGCWC 2 cut(s) 940, 1837
Alw26I GTCTC 7 cut(s) 116, 200, 525, 1012, 1802, 1868, 2622
AlwI GGATC 4 cut(s) 639, 1285, 2258, 2630
AlwNI CAGNNNCTG 1 cut(s) 2743
AoxI GGCC 7 cut(s) 19, 274, 291, 408, 1094, 1907, 2154
ApeKI GCWGC 3 cut(s) 71, 1673, 2539
ApoI RAATTY 6 cut(s) 227, 1756, 1771, 1865, 2486, 2600
ArsI GACNNNNNNTTYG 3 cut(s) 31, 1346, 1378
AspLEI GCGC 3 cut(s) 252, 267, 429
AspS9I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1944, 2290
AsuC2I CCSGG 2 cut(s) 220, 1649
AsuHPI GGTGA 5 cut(s) 769, 1136, 1280, 2308, 2359
AvaII GGWCC 5 cut(s) 155, 178, 216, 1944, 2290
BauI CACGAG 1 cut(s) 1836
BbsI GAAGAC 5 cut(s) 317, 1065, 1074, 1386, 2307
Bbv12I GWGCWC 2 cut(s) 940, 1837
BbvCI CCTCAGC 1 cut(s) 1091
BbvI GCAGC 3 cut(s) 83, 1685, 2551
BccI CCATC 8 cut(s) 160, 302, 470, 748, 1090, 1647, 1786, 2761
BceAI ACGGC 2 cut(s) 14, 252
BcgI CGANNNNNNTGC 4 cut(s) 60, 94, 2043, 2077
BciVI GTATCC 1 cut(s) 1839
BclI TGATCA 1 cut(s) 2197
BcnI CCSGG 2 cut(s) 220, 1649
BcoDI GTCTC 7 cut(s) 116, 200, 525, 1012, 1802, 1868, 2622
BfaI CTAG 6 cut(s) 152, 1200, 1476, 1614, 1857, 2337
BfmI CTRYAG 1 cut(s) 1048
BfoI RGCGCY 1 cut(s) 268
BfuAI ACCTGC 1 cut(s) 2301
BfuI GTATCC 1 cut(s) 1839
BglI GCCNNNNNGGC 1 cut(s) 273
BglII AGATCT 2 cut(s) 1100, 1438
BisI GCNGC 6 cut(s) 72, 551, 1674, 2154, 2540, 2543
BlsI GCNGC 6 cut(s) 73, 552, 1675, 2155, 2541, 2544
Bme1390I CCNGG 2 cut(s) 220, 1649
Bme18I GGWCC 5 cut(s) 155, 178, 216, 1944, 2290
BmeRI GACNNNNNGTC 1 cut(s) 2025
BmgT120I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1944, 2290
BmiI GGNNCC 4 cut(s) 157, 218, 1431, 1946
BmrFI CCNGG 2 cut(s) 220, 1649
BmrI ACTGGG 1 cut(s) 1336
BmsI GCATC 6 cut(s) 1020, 1042, 1186, 1453, 1582, 2547
BmuI ACTGGG 1 cut(s) 1336
BoxI GACNNNNGTC 1 cut(s) 1971
BpiI GAAGAC 5 cut(s) 317, 1065, 1074, 1386, 2307
BpmI CTGGAG 2 cut(s) 1131, 1448
Bpu10I CCTNAGC 2 cut(s) 1091, 1735
BpuEI CTTGAG 3 cut(s) 1160, 1954, 2166
BpuMI CCSGG 2 cut(s) 220, 1649
BsaAI YACGTR 1 cut(s) 2369
BsaBI GATNNNNATC 2 cut(s) 1105, 1347
BsaHI GRCGYC 1 cut(s) 234
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 5 cut(s) 117, 159, 238, 615, 1151
BsaXI ACNNNNNCTCC 8 cut(s) 476, 506, 946, 976, 1799, 1829, 2732, 2762
Bsc4I CCNNNNNNNGG 2 cut(s) 951, 2650
Bse1I ACTGG 3 cut(s) 46, 1331, 2573
Bse3DI GCAATG 3 cut(s) 930, 1623, 1663
Bse8I GATNNNNATC 2 cut(s) 1105, 1347
BseDI CCNNGG 5 cut(s) 117, 159, 238, 615, 1151
BseGI GGATG 7 cut(s) 535, 547, 742, 1033, 1035, 1408, 1597
BseJI GATNNNNATC 2 cut(s) 1105, 1347
BseLI CCNNNNNNNGG 2 cut(s) 951, 2650
BseMI GCAATG 3 cut(s) 930, 1623, 1663
BseNI ACTGG 3 cut(s) 46, 1331, 2573
BseRI GAGGAG 2 cut(s) 497, 2621
BseXI GCAGC 3 cut(s) 83, 1685, 2551
BseYI CCCAGC 1 cut(s) 1888
Bsh1236I CGCG 2 cut(s) 429, 2023
BshFI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1909, 2156
BsiHKAI GWGCWC 2 cut(s) 940, 1837
BsiSI CCGG 4 cut(s) 18, 220, 1648, 1991
BslFI GGGAC 4 cut(s) 34, 202, 1930, 2013
BslI CCNNNNNNNGG 2 cut(s) 951, 2650
BsmAI GTCTC 7 cut(s) 116, 200, 525, 1012, 1802, 1868, 2622
BsmBI CGTCTC 1 cut(s) 116
BsmFI GGGAC 4 cut(s) 34, 202, 1930, 2013
BsnI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1909, 2156
Bso31I GGTCTC 1 cut(s) 200
Bsp1286I GDGCHC 2 cut(s) 940, 1837
Bsp143I GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
BspACI CCGC 6 cut(s) 339, 551, 1751, 2153, 2542, 2560
BspANI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1909, 2156
BspFNI CGCG 2 cut(s) 429, 2023
BspHI TCATGA 1 cut(s) 1983
BspLI GGNNCC 4 cut(s) 157, 218, 1431, 1946
BspMI ACCTGC 1 cut(s) 2301
BspPI GGATC 4 cut(s) 639, 1285, 2258, 2630
BspQI GCTCTTC 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 339
BsrDI GCAATG 3 cut(s) 930, 1623, 1663
BsrI ACTGG 3 cut(s) 46, 1331, 2573
BssECI CCNNGG 5 cut(s) 117, 159, 238, 615, 1151
BssMI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
BssNI GRCGYC 1 cut(s) 234
BssSI CACGAG 1 cut(s) 1836
BssT1I CCWWGG 3 cut(s) 117, 159, 1151
Bst2BI CACGAG 1 cut(s) 1836
Bst4CI ACNGT 6 cut(s) 146, 318, 578, 1879, 2353, 2645
Bst6I CTCTTC 7 cut(s) 255, 552, 963, 978, 1008, 1578, 2861
BstACI GRCGYC 1 cut(s) 234
BstAPI GCANNNNNTGC 1 cut(s) 1658
BstBAI YACGTR 1 cut(s) 2369
BstC8I GCNNGC 7 cut(s) 283, 431, 936, 1654, 1671, 1911, 2537
BstENI CCTNNNNNAGG 1 cut(s) 949
BstF5I GGATG 7 cut(s) 535, 547, 742, 1033, 1035, 1408, 1597
BstFNI CGCG 2 cut(s) 429, 2023
BstH2I RGCGCY 1 cut(s) 268
BstHHI GCGC 3 cut(s) 252, 267, 429
BstKTI GATC 9 cut(s) 634, 693, 1103, 1120, 1280, 1441, 2200, 2266, 2638
BstMAI GTCTC 7 cut(s) 116, 200, 525, 1012, 1802, 1868, 2622
BstMBI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
BstNSI RCATGY 2 cut(s) 2539, 2831
BstPAI GACNNNNGTC 1 cut(s) 1971
BstSCI CCNGG 2 cut(s) 218, 1647
BstSFI CTRYAG 1 cut(s) 1048
BstUI CGCG 2 cut(s) 429, 2023
BstV1I GCAGC 3 cut(s) 83, 1685, 2551
BstV2I GAAGAC 5 cut(s) 317, 1065, 1074, 1386, 2307
BstX2I RGATCY 4 cut(s) 631, 1100, 1277, 1438
BstXI CCANNNNNNTGG 1 cut(s) 166
BstYI RGATCY 4 cut(s) 631, 1100, 1277, 1438
BsuI GTATCC 1 cut(s) 1839
BsuRI GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1909, 2156
BtgZI GCGATG 1 cut(s) 179
BtsCI GGATG 7 cut(s) 535, 547, 742, 1033, 1035, 1408, 1597
BtsI GCAGTG 1 cut(s) 2530
BtsIMutI CAGTG 4 cut(s) 314, 1038, 2530, 2580
BveI ACCTGC 1 cut(s) 2301
Cac8I GCNNGC 7 cut(s) 283, 431, 936, 1654, 1671, 1911, 2537
CaiI CAGNNNCTG 1 cut(s) 2743
CciI TCATGA 1 cut(s) 1983
CfoI GCGC 3 cut(s) 252, 267, 429
Cfr13I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1944, 2290
CseI GACGC 2 cut(s) 1079, 2029
Csp6I GTAC 2 cut(s) 328, 420
CviQI GTAC 2 cut(s) 328, 420
DpnI GATC 9 cut(s) 633, 692, 1102, 1119, 1279, 1440, 2199, 2265, 2637
DpnII GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
DraI TTTAAA 1 cut(s) 2491
DrdI GACNNNNNNGTC 1 cut(s) 214
DriI GACNNNNNGTC 1 cut(s) 2025
DseDI GACNNNNNNGTC 1 cut(s) 214
EaeI YGGCCR 1 cut(s) 2154
Eam1104I CTCTTC 7 cut(s) 255, 552, 963, 978, 1008, 1578, 2861
Eam1105I GACNNNNNGTC 1 cut(s) 2025
EarI CTCTTC 7 cut(s) 255, 552, 963, 978, 1008, 1578, 2861
Eco130I CCWWGG 3 cut(s) 117, 159, 1151
Eco31I GGTCTC 1 cut(s) 200
Eco47I GGWCC 5 cut(s) 155, 178, 216, 1944, 2290
Eco57I CTGAAG 5 cut(s) 987, 1278, 2139, 2537, 2765
EcoNI CCTNNNNNAGG 1 cut(s) 949
EcoO109I RGGNCCY 1 cut(s) 155
EcoT14I CCWWGG 3 cut(s) 117, 159, 1151
EcoT22I ATGCAT 1 cut(s) 1035
ErhI CCWWGG 3 cut(s) 117, 159, 1151
Esp3I CGTCTC 1 cut(s) 116
FalI AAGNNNNNCTT 4 cut(s) 452, 484, 2790, 2822
FaqI GGGAC 4 cut(s) 34, 202, 1930, 2013
FauI CCCGC 1 cut(s) 332
FauNDI CATATG 1 cut(s) 212
FbaI TGATCA 1 cut(s) 2197
FblI GTMKAC 1 cut(s) 1359
Fnu4HI GCNGC 6 cut(s) 72, 551, 1674, 2154, 2540, 2543
FokI GGATG 7 cut(s) 542, 554, 749, 1020, 1042, 1415, 1604
Fsp4HI GCNGC 6 cut(s) 72, 551, 1674, 2154, 2540, 2543
FspBI CTAG 6 cut(s) 152, 1200, 1476, 1614, 1857, 2337
GlaI GCGC 3 cut(s) 251, 266, 428
GluI GCNGC 6 cut(s) 72, 551, 1674, 2154, 2540, 2543
GsaI CCCAGC 1 cut(s) 1892
GsuI CTGGAG 2 cut(s) 1131, 1448
HaeII RGCGCY 1 cut(s) 268
HaeIII GGCC 7 cut(s) 21, 276, 293, 410, 1096, 1909, 2156
HapII CCGG 4 cut(s) 18, 220, 1648, 1991
HgaI GACGC 2 cut(s) 1079, 2029
HhaI GCGC 3 cut(s) 252, 267, 429
Hin1I GRCGYC 1 cut(s) 234
Hin6I GCGC 3 cut(s) 250, 265, 427
HinP1I GCGC 3 cut(s) 250, 265, 427
HincII GTYRAC 1 cut(s) 2178
HindII GTYRAC 1 cut(s) 2178
HindIII AAGCTT 1 cut(s) 1667
HpaII CCGG 4 cut(s) 18, 220, 1648, 1991
HphI GGTGA 5 cut(s) 769, 1136, 1280, 2308, 2359
Hpy166II GTNNAC 7 cut(s) 149, 777, 1360, 1712, 2178, 2648, 2711
Hpy8I GTNNAC 7 cut(s) 149, 777, 1360, 1712, 2178, 2648, 2711
Hpy99I CGWCG 2 cut(s) 104, 236
HpyCH4III ACNGT 6 cut(s) 146, 318, 578, 1879, 2353, 2645
HpyCH4IV ACGT 4 cut(s) 234, 1356, 2129, 2368
HpySE526I ACGT 4 cut(s) 234, 1356, 2129, 2368
Hsp92I GRCGYC 1 cut(s) 234
HspAI GCGC 3 cut(s) 250, 265, 427
Ksp22I TGATCA 1 cut(s) 2197
Kzo9I GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 5 cut(s) 101, 991, 1429, 1573, 2740
Lsp1109I GCAGC 3 cut(s) 83, 1685, 2551
LweI GCATC 6 cut(s) 1020, 1042, 1186, 1453, 1582, 2547
MaeI CTAG 6 cut(s) 152, 1200, 1476, 1614, 1857, 2337
MaeII ACGT 4 cut(s) 234, 1356, 2129, 2368
MaeIII GTNAC 4 cut(s) 638, 665, 2125, 2347
MalI GATC 9 cut(s) 633, 692, 1102, 1119, 1279, 1440, 2199, 2265, 2637
MbiI CCGCTC 1 cut(s) 339
MboI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
MfeI CAATTG 1 cut(s) 437
MflI RGATCY 4 cut(s) 631, 1100, 1277, 1438
MhlI GDGCHC 2 cut(s) 940, 1837
MluI ACGCGT 1 cut(s) 2021
MlyI GAGTC 7 cut(s) 514, 887, 955, 1376, 1804, 1981, 2297
MmeI TCCRAC 5 cut(s) 84, 123, 1569, 2346, 2430
Mph1103I ATGCAT 1 cut(s) 1035
MslI CAYNNNNRTG 2 cut(s) 663, 2285
MspA1I CMGCKG 2 cut(s) 1753, 2542
MspI CCGG 4 cut(s) 18, 220, 1648, 1991
MspR9I CCNGG 2 cut(s) 220, 1649
MunI CAATTG 1 cut(s) 437
MvnI CGCG 2 cut(s) 429, 2023
NciI CCSGG 2 cut(s) 220, 1649
NdeI CATATG 1 cut(s) 212
NdeII GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
NlaIV GGNNCC 4 cut(s) 157, 218, 1431, 1946
NmuCI GTSAC 4 cut(s) 638, 665, 2125, 2347
NsiI ATGCAT 1 cut(s) 1035
NspI RCATGY 2 cut(s) 2539, 2831
PaeI GCATGC 1 cut(s) 2539
PagI TCATGA 1 cut(s) 1983
PciSI GCTCTTC 1 cut(s) 255
PcsI WCGNNNNNNNCGW 3 cut(s) 1362, 2385, 2713
PfeI GAWTC 9 cut(s) 369, 1127, 1180, 1205, 1226, 1244, 1644, 2186, 2394
PfoI TCCNGGA 1 cut(s) 218
PkrI GCNGC 6 cut(s) 73, 552, 1675, 2155, 2541, 2544
PleI GAGTC 7 cut(s) 513, 887, 955, 1376, 1804, 1981, 2297
PpsI GAGTC 7 cut(s) 513, 887, 955, 1376, 1804, 1981, 2297
Ppu21I YACGTR 1 cut(s) 2369
PpuMI RGGWCCY 1 cut(s) 155
PshAI GACNNNNGTC 1 cut(s) 1971
Psp5II RGGWCCY 1 cut(s) 155
PspFI CCCAGC 1 cut(s) 1888
PspN4I GGNNCC 4 cut(s) 157, 218, 1431, 1946
PspPI GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1944, 2290
PspPPI RGGWCCY 1 cut(s) 155
PstNI CAGNNNCTG 1 cut(s) 2743
PsuI RGATCY 4 cut(s) 631, 1100, 1277, 1438
RsaI GTAC 2 cut(s) 329, 421
RsaNI GTAC 2 cut(s) 328, 420
RseI CAYNNNNRTG 2 cut(s) 663, 2285
SapI GCTCTTC 1 cut(s) 255
SatI GCNGC 6 cut(s) 72, 551, 1674, 2154, 2540, 2543
Sau3AI GATC 9 cut(s) 631, 690, 1100, 1117, 1277, 1438, 2197, 2263, 2635
Sau96I GGNCC 7 cut(s) 20, 155, 178, 216, 274, 1944, 2290
SchI GAGTC 7 cut(s) 514, 887, 955, 1376, 1804, 1981, 2297
ScrFI CCNGG 2 cut(s) 220, 1649
SduI GDGCHC 2 cut(s) 940, 1837
SfaNI GCATC 6 cut(s) 1020, 1042, 1186, 1453, 1582, 2547
SfcI CTRYAG 1 cut(s) 1048
SinI GGWCC 5 cut(s) 155, 178, 216, 1944, 2290
SmiMI CAYNNNNRTG 2 cut(s) 663, 2285
SmlI CTYRAG 3 cut(s) 1139, 1933, 2181
SmoI CTYRAG 3 cut(s) 1139, 1933, 2181
SphI GCATGC 1 cut(s) 2539
SsiI CCGC 6 cut(s) 339, 551, 1751, 2153, 2542, 2560
SspI AATATT 2 cut(s) 1724, 1998
SspMI CTAG 6 cut(s) 152, 1200, 1476, 1614, 1857, 2337
StyD4I CCNGG 2 cut(s) 218, 1647
StyI CCWWGG 3 cut(s) 117, 159, 1151
TaaI ACNGT 6 cut(s) 146, 318, 578, 1879, 2353, 2645
TaiI ACGT 4 cut(s) 237, 1359, 2132, 2371
TaqI TCGA 7 cut(s) 204, 231, 297, 1185, 1365, 1642, 2750
TauI GCSGC 3 cut(s) 553, 2156, 2545
TfiI GAWTC 9 cut(s) 369, 1127, 1180, 1205, 1226, 1244, 1644, 2186, 2394
TscAI CASTG 4 cut(s) 321, 1045, 2537, 2580
TseFI GTSAC 4 cut(s) 638, 665, 2125, 2347
TseI GCWGC 3 cut(s) 71, 1673, 2539
Tsp45I GTSAC 4 cut(s) 638, 665, 2125, 2347
TspGWI ACGGA 2 cut(s) 657, 1803
TspRI CASTG 4 cut(s) 321, 1045, 2537, 2580
VpaK11BI GGWCC 5 cut(s) 155, 178, 216, 1944, 2290
XagI CCTNNNNNAGG 1 cut(s) 949
XapI RAATTY 6 cut(s) 227, 1756, 1771, 1865, 2486, 2600
XceI RCATGY 2 cut(s) 2539, 2831
XmiI GTMKAC 1 cut(s) 1359
XspI CTAG 6 cut(s) 152, 1200, 1476, 1614, 1857, 2337
ZraI GACGTC 1 cut(s) 235
Zsp2I ATGCAT 1 cut(s) 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.