Rorug03G0192900

galactinol--sucrose galactosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
16977772 .. 16978254
483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0192900.1

Sequence Viewer

Length: 435 bp
ATGGATTTGGCTGTGATGAAGGGAACTAACCGTCGGTTCCATTTGGCAGAGAACAGCTGTGACGAAAAGGTCAATGTCAAGCTGAATTATAAAGAGTATTTTGAGAAATCTCCAGGTGTAAAATTCCAAAGTTTGTTTGAGGAGAGCAACTTCCAAAGTTATTACAAGGAAGTAGTTACTGGCCACTTGACTTTTAAGGGAAGCACTTGGAGCAACCACGGCTTATCTGTTGTCTCGTGGCGTGACTGGCATCAAAATTTTGGCGGTCAATTCTCGGATGTTGGGGATAGAAGACTATGGTATTTTGAAAAAGAGCCCATATACTTAAAAATGTTTTCGCTTCCAATAGGCATTTGTGGCGAAATTCGTGGCATATTCTATGACAATGGTCACTGTAAAGCTCCTACAGTAACGAGGACTGTTTTATATAATTAG

Protein Analysis

144

Amino Acids

16.84

Weight (kDa)

8.4

Isoelectric Point (pI)

35.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 90
AasI GACNNNNNNGTC 1 cut(s) 68
AciI CCGC 1 cut(s) 264
AcoI YGGCCR 1 cut(s) 181
AcsI RAATTY 3 cut(s) 122, 256, 363
AgsI TTSAA 1 cut(s) 308
AjnI CCWGG 1 cut(s) 112
AluBI AGCT 3 cut(s) 57, 82, 401
AluI AGCT 3 cut(s) 57, 82, 401
Alw26I GTCTC 1 cut(s) 238
AoxI GGCC 1 cut(s) 181
ApoI RAATTY 3 cut(s) 122, 256, 363
BalI TGGCCA 1 cut(s) 183
BanII GRGCYC 1 cut(s) 318
BauI CACGAG 1 cut(s) 235
BbsI GAAGAC 1 cut(s) 298
BceAI ACGGC 1 cut(s) 235
BciT130I CCWGG 1 cut(s) 114
BcoDI GTCTC 1 cut(s) 238
BfmI CTRYAG 1 cut(s) 405
Bme1390I CCNGG 1 cut(s) 114
BmiI GGNNCC 1 cut(s) 38
BmrFI CCNGG 1 cut(s) 114
BmsI GCATC 1 cut(s) 259
BoxI GACNNNNGTC 1 cut(s) 387
BpiI GAAGAC 1 cut(s) 298
BpmI CTGGAG 1 cut(s) 96
BsaJI CCNNGG 1 cut(s) 217
Bse1I ACTGG 2 cut(s) 184, 251
BseBI CCWGG 1 cut(s) 114
BseDI CCNNGG 1 cut(s) 217
BseGI GGATG 1 cut(s) 283
BseNI ACTGG 2 cut(s) 184, 251
BseRI GAGGAG 1 cut(s) 155
BshFI GGCC 1 cut(s) 183
BsmAI GTCTC 1 cut(s) 238
BsnI GGCC 1 cut(s) 183
Bsp1286I GDGCHC 1 cut(s) 318
BspACI CCGC 1 cut(s) 264
BspANI GGCC 1 cut(s) 183
BspLI GGNNCC 1 cut(s) 38
BsrI ACTGG 2 cut(s) 184, 251
BssECI CCNNGG 1 cut(s) 217
BssSI CACGAG 1 cut(s) 235
Bst2BI CACGAG 1 cut(s) 235
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 4 cut(s) 32, 395, 409, 421
BstDSI CCRYGG 1 cut(s) 217
BstF5I GGATG 1 cut(s) 283
BstMAI GTCTC 1 cut(s) 238
BstMWI GCNNNNNNNGC 4 cut(s) 210, 219, 247, 357
BstNI CCWGG 1 cut(s) 114
BstPAI GACNNNNGTC 1 cut(s) 387
BstSCI CCNGG 1 cut(s) 112
BstSFI CTRYAG 1 cut(s) 405
BstV2I GAAGAC 1 cut(s) 298
BsuRI GGCC 1 cut(s) 183
BtgI CCRYGG 1 cut(s) 217
BtsCI GGATG 1 cut(s) 283
BtsIMutI CAGTG 1 cut(s) 391
CviJI RGCY 7 cut(s) 11, 57, 82, 183, 222, 316, 401
CviKI_1 RGCY 7 cut(s) 11, 57, 82, 183, 222, 316, 401
DrdI GACNNNNNNGTC 1 cut(s) 68
DseDI GACNNNNNNGTC 1 cut(s) 68
EaeI YGGCCR 1 cut(s) 181
Eco24I GRGCYC 1 cut(s) 318
EcoRII CCWGG 1 cut(s) 112
EcoT38I GRGCYC 1 cut(s) 318
FaiI YATR 8 cut(s) 90, 298, 320, 322, 374, 381, 427, 429
FokI GGATG 1 cut(s) 290
FriOI GRGCYC 1 cut(s) 318
GsuI CTGGAG 1 cut(s) 96
HaeIII GGCC 1 cut(s) 183
Hpy188I TCNGA 1 cut(s) 277
Hpy99I CGWCG 1 cut(s) 36
HpyAV CCTTC 1 cut(s) 13
HpyCH4III ACNGT 4 cut(s) 32, 395, 409, 421
HpyF10VI GCNNNNNNNGC 4 cut(s) 210, 219, 247, 357
LmnI GCTCC 2 cut(s) 210, 406
LpnPI CCDG 4 cut(s) 99, 126, 165, 232
LweI GCATC 1 cut(s) 259
MaeIII GTNAC 5 cut(s) 59, 175, 242, 389, 409
MboII GAAGA 1 cut(s) 303
MhlI GDGCHC 1 cut(s) 318
MlsI TGGCCA 1 cut(s) 183
MluCI AATT 6 cut(s) 85, 122, 256, 269, 363, 430
MluNI TGGCCA 1 cut(s) 183
MnlI CCTC 2 cut(s) 133, 408
Mox20I TGGCCA 1 cut(s) 183
MscI TGGCCA 1 cut(s) 183
MseI TTAA 2 cut(s) 195, 326
Msp20I TGGCCA 1 cut(s) 183
MspA1I CMGCKG 1 cut(s) 57
MspR9I CCNGG 1 cut(s) 114
MvaI CCWGG 1 cut(s) 114
MwoI GCNNNNNNNGC 4 cut(s) 210, 219, 247, 357
NlaIV GGNNCC 1 cut(s) 38
NmuCI GTSAC 3 cut(s) 59, 242, 389
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 1 cut(s) 90
Psp6I CCWGG 1 cut(s) 112
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 1 cut(s) 38
PvuII CAGCTG 1 cut(s) 57
SaqAI TTAA 2 cut(s) 195, 326
ScrFI CCNGG 1 cut(s) 114
SduI GDGCHC 1 cut(s) 318
SetI ASST 5 cut(s) 59, 72, 84, 118, 403
SfaNI GCATC 1 cut(s) 259
SfcI CTRYAG 1 cut(s) 405
Sse9I AATT 6 cut(s) 85, 122, 256, 269, 363, 430
SsiI CCGC 1 cut(s) 264
StyD4I CCNGG 1 cut(s) 112
TaaI ACNGT 4 cut(s) 32, 395, 409, 421
TasI AATT 6 cut(s) 85, 122, 256, 269, 363, 430
Tru1I TTAA 2 cut(s) 195, 326
Tru9I TTAA 2 cut(s) 195, 326
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 3 cut(s) 59, 242, 389
Tsp45I GTSAC 3 cut(s) 59, 242, 389
TspDTI ATGAA 1 cut(s) 32
TspRI CASTG 1 cut(s) 398
XapI RAATTY 3 cut(s) 122, 256, 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.