pycom14g05880

galactinol--sucrose galactosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
5726408 .. 5728403
1996 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g05880.2

Sequence Viewer

Length: 1458 bp
ATGAATTCAGTTACCGATATATGTGATGGTGGAATGAATGATCTGACTATGTTAACAACAAACAATAATTTTTTTGTCGAATTCTGTGTGCTCTGCTTGACATTTTATGATGTTTTACTAATATTAGAATTTATTTTAAGAGTTGTACAGCAAGTAGTATTGTTACTAATTTGTCGAATTTATGTTTCTTGCTGGCACAGATTTGTTTATGTATGGCATGCTCTAGCTGGGTACTGGGGTGGAGTAAAACCAGCTGCTACTGGCATGGAACACTATGACACTGCTTTAGCATACCCAGTGACGTCCCCTGGTGTAGAGGGCAACCAACCAGATATAGTTATGGACAGCTTAACTGTTCATGGTCTTGGTTTGGTACATCCGAAGAAAGTTTTCAATTTCTACAATGAGCTTCATTCCTACTTGGCTTCCTGCGGAGTCGATGGAGTTAAGGTTGATGTTCAGAACATCATTGAGACTCTAGGGTCTGGTCATGGTGGAAGAGTTTCTCTGACCCGCAGCTACCACCAGGCACTTGAGGCTTCTGTTGCTCGAAATTTTGCTGACAATGGATGCATTTCTTGCATGTGTCACAACACTGATGGGCTCTACAGTCACAAGCAGACTGCTGTGGTCAGAGCCTCTGATGACGTCTATCCCCGAGATCCTGCTTCACACACGATTCACATATCTTCCGTTGCTTATAACACCCTGTTCCTTGGAGAATTCATGCAACCTGACTGGGATATGTTTCACAGTTTTCACCCAGTGGCAGAGTACCACGGTGCAGCCCATGCTCTTGGTGGATGTGCAATCTATGTGAGCGATAAGCCAGGCAATCACAATTTTGACCTTCTAAGGAAGCTGGTTCTCCCTGATGGATCTGTCCTCCGTGCCAAGTTACCTGGCAGGCCTACACGTGATTGTCTCTTCGCTGATCCAGCAAGAGACAGGACAAGGTTTTGTTCTATTTACTTCTCTTTATGCTTTTCCCAAGTTATGTTAAAATTGAGAGCCTCCATGAGTAAAGCTTGTGTGAATAATTCTCTTTGCAGCTTGCTCAAAATATGGAACGTCAACAATCTCTCTGGTGTGGTTGGTGTGTTTAACTGTCAAGGTGCCGGTTGGTGCAAGATTGAAAAGAAGACACGCATTCATGATTACTCTCCCGGTACCCTCAGTGGTTCTGTTCGTGCCGCTGATGTTGAGGCCATTGCTCAAGTTGCTGGTGCTGATTGGAATGGAGAAACAGTAGTTTATGCTCATAAGTCAGGTACCACTACTTTGTTTACAGAAGCTAGTTTGAAGGAACACTTTAGATTGCCATGGAAGCAGCAGAGTTCTCTGATAACGTGTCAATATGATAATGGCGAAGTTTTAAGAAGAAATCTACCTGCCTTTGTTATGAATCGTAACATTATTCTCATAGTATTCCTGCTCTTCAACTTTGCAACGATATGA

Protein Analysis

486

Amino Acids

53.85

Weight (kDa)

6.84

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
AasI GACNNNNNNGTC 1 cut(s) 481
AatII GACGTC 2 cut(s) 305, 651
Acc36I ACCTGC 1 cut(s) 1399
Acc65I GGTACC 2 cut(s) 1169, 1271
AccB1I GGYRCC 3 cut(s) 1115, 1169, 1271
AciI CCGC 3 cut(s) 432, 514, 1194
AclWI GGATC 3 cut(s) 656, 886, 929
AcsI RAATTY 6 cut(s) 4, 80, 128, 177, 553, 722
AcvI CACGTG 1 cut(s) 917
AcyI GRCGYC 2 cut(s) 302, 648
AdeI CACNNNGTG 1 cut(s) 766
AfaI GTAC 6 cut(s) 147, 233, 375, 776, 1171, 1273
AflIII ACRYGT 2 cut(s) 914, 1349
AgsI TTSAA 4 cut(s) 394, 1136, 1303, 1441
AjnI CCWGG 4 cut(s) 307, 525, 829, 901
AluBI AGCT 9 cut(s) 227, 254, 348, 409, 519, 862, 1028, 1053, 1295
AluI AGCT 9 cut(s) 227, 254, 348, 409, 519, 862, 1028, 1053, 1295
Alw21I GWGCWC 1 cut(s) 93
Alw26I GTCTC 3 cut(s) 467, 929, 939
AlwI GGATC 3 cut(s) 656, 886, 929
Ama87I CYCGRG 1 cut(s) 657
AoxI GGCC 2 cut(s) 908, 1206
ApeKI GCWGC 5 cut(s) 254, 516, 785, 1050, 1330
ApoI RAATTY 6 cut(s) 4, 80, 128, 177, 553, 722
Asp700I GAANNNNTTC 2 cut(s) 389, 502
Asp718I GGTACC 2 cut(s) 1169, 1271
AsuC2I CCSGG 1 cut(s) 1167
AsuHPI GGTGA 1 cut(s) 752
AvaI CYCGRG 1 cut(s) 657
BaeI ACNNNNGTAYC 2 cut(s) 223, 256
BanI GGYRCC 3 cut(s) 1115, 1169, 1271
BanII GRGCYC 1 cut(s) 606
BbrPI CACGTG 1 cut(s) 917
BbsI GAAGAC 1 cut(s) 1148
Bbv12I GWGCWC 1 cut(s) 93
BbvI GCAGC 5 cut(s) 241, 528, 797, 1062, 1342
BccI CCATC 4 cut(s) 20, 434, 593, 869
BciT130I CCWGG 4 cut(s) 309, 527, 831, 903
BcnI CCSGG 1 cut(s) 1167
BcoDI GTCTC 3 cut(s) 467, 929, 939
BfaI CTAG 3 cut(s) 224, 479, 1296
BfmI CTRYAG 1 cut(s) 607
BfuAI ACCTGC 1 cut(s) 1399
BisI GCNGC 6 cut(s) 255, 517, 786, 1051, 1194, 1331
BlsI GCNGC 6 cut(s) 256, 518, 787, 1052, 1195, 1332
Bme1390I CCNGG 5 cut(s) 309, 527, 831, 903, 1167
BmeT110I CYCGRG 1 cut(s) 657
BmiI GGNNCC 3 cut(s) 1117, 1171, 1273
BmrFI CCNGG 5 cut(s) 309, 527, 831, 903, 1167
BmrI ACTGGG 4 cut(s) 244, 290, 748, 758
BmsI GCATC 1 cut(s) 560
BmuI ACTGGG 4 cut(s) 244, 290, 748, 758
BpiI GAAGAC 1 cut(s) 1148
BpuEI CTTGAG 2 cut(s) 554, 1200
BpuMI CCSGG 1 cut(s) 1167
BsaAI YACGTR 1 cut(s) 917
BsaHI GRCGYC 2 cut(s) 302, 648
BsaJI CCNNGG 4 cut(s) 307, 715, 778, 1322
BsaXI ACNNNNNCTCC 4 cut(s) 435, 465, 1233, 1263
Bse118I RCCGGY 1 cut(s) 1118
Bse1I ACTGG 5 cut(s) 239, 265, 296, 743, 764
Bse3DI GCAATG 1 cut(s) 1209
BseBI CCWGG 4 cut(s) 309, 527, 831, 903
BseDI CCNNGG 4 cut(s) 307, 715, 778, 1322
BseGI GGATG 3 cut(s) 376, 575, 809
BseMI GCAATG 1 cut(s) 1209
BseMII CTCAG 1 cut(s) 1189
BseNI ACTGG 5 cut(s) 239, 265, 296, 743, 764
BseXI GCAGC 5 cut(s) 241, 528, 797, 1062, 1342
BseYI CCCAGC 1 cut(s) 227
BsgI GTGCAG 1 cut(s) 804
BshFI GGCC 2 cut(s) 910, 1208
BshNI GGYRCC 3 cut(s) 1115, 1169, 1271
BsiHKAI GWGCWC 1 cut(s) 93
BsiHKCI CYCGRG 1 cut(s) 657
BsiSI CCGG 2 cut(s) 1119, 1167
BslFI GGGAC 1 cut(s) 289
BsmAI GTCTC 3 cut(s) 467, 929, 939
BsmFI GGGAC 1 cut(s) 289
BsmI GAATGC 1 cut(s) 1149
BsnI GGCC 2 cut(s) 910, 1208
BsoBI CYCGRG 1 cut(s) 657
Bsp1286I GDGCHC 2 cut(s) 93, 606
Bsp1407I TGTACA 1 cut(s) 145
Bsp143I GATC 4 cut(s) 40, 661, 878, 934
Bsp19I CCATGG 1 cut(s) 1322
BspACI CCGC 3 cut(s) 432, 514, 1194
BspANI GGCC 2 cut(s) 910, 1208
BspCNI CTCAG 1 cut(s) 1188
BspHI TCATGA 1 cut(s) 1153
BspLI GGNNCC 3 cut(s) 1117, 1171, 1273
BspMI ACCTGC 1 cut(s) 1399
BspPI GGATC 3 cut(s) 656, 886, 929
BspQI GCTCTTC 1 cut(s) 1442
BspT107I GGYRCC 3 cut(s) 1115, 1169, 1271
BsrDI GCAATG 1 cut(s) 1209
BsrFI RCCGGY 1 cut(s) 1118
BsrGI TGTACA 1 cut(s) 145
BsrI ACTGG 5 cut(s) 239, 265, 296, 743, 764
BssAI RCCGGY 1 cut(s) 1118
BssECI CCNNGG 4 cut(s) 307, 715, 778, 1322
BssMI GATC 4 cut(s) 40, 661, 878, 934
BssNI GRCGYC 2 cut(s) 302, 648
BssT1I CCWWGG 2 cut(s) 715, 1322
Bst2UI CCWGG 4 cut(s) 309, 527, 831, 903
Bst4CI ACNGT 6 cut(s) 355, 611, 755, 782, 1109, 1249
Bst6I CTCTTC 3 cut(s) 493, 932, 1442
BstACI GRCGYC 2 cut(s) 302, 648
BstAPI GCANNNNNTGC 2 cut(s) 579, 791
BstAUI TGTACA 1 cut(s) 145
BstBAI YACGTR 1 cut(s) 917
BstC8I GCNNGC 4 cut(s) 194, 219, 908, 1055
BstDEI CTNAG 2 cut(s) 854, 1175
BstDSI CCRYGG 2 cut(s) 778, 1322
BstF5I GGATG 3 cut(s) 376, 575, 809
BstKTI GATC 4 cut(s) 43, 664, 881, 937
BstMAI GTCTC 3 cut(s) 467, 929, 939
BstMBI GATC 4 cut(s) 40, 661, 878, 934
BstMWI GCNNNNNNNGC 7 cut(s) 536, 545, 579, 791, 938, 1220, 1327
BstNI CCWGG 4 cut(s) 309, 527, 831, 903
BstNSI RCATGY 2 cut(s) 221, 586
BstSCI CCNGG 5 cut(s) 307, 525, 829, 901, 1165
BstSFI CTRYAG 1 cut(s) 607
BstV1I GCAGC 5 cut(s) 241, 528, 797, 1062, 1342
BstV2I GAAGAC 1 cut(s) 1148
BstX2I RGATCY 2 cut(s) 661, 878
BstXI CCANNNNNNTGG 1 cut(s) 797
BstYI RGATCY 2 cut(s) 661, 878
BsuRI GGCC 2 cut(s) 910, 1208
BtgI CCRYGG 2 cut(s) 778, 1322
BtsCI GGATG 3 cut(s) 376, 575, 809
BtsI GCAGTG 1 cut(s) 279
BtsIMutI CAGTG 5 cut(s) 279, 303, 594, 771, 1183
BveI ACCTGC 1 cut(s) 1399
Cac8I GCNNGC 4 cut(s) 194, 219, 908, 1055
CciI TCATGA 1 cut(s) 1153
Cfr10I RCCGGY 1 cut(s) 1118
Csp6I GTAC 6 cut(s) 146, 232, 374, 775, 1170, 1272
CviQI GTAC 6 cut(s) 146, 232, 374, 775, 1170, 1272
DdeI CTNAG 2 cut(s) 854, 1175
DpnI GATC 4 cut(s) 42, 663, 880, 936
DpnII GATC 4 cut(s) 40, 661, 878, 934
DraIII CACNNNGTG 1 cut(s) 766
DrdI GACNNNNNNGTC 1 cut(s) 481
DseDI GACNNNNNNGTC 1 cut(s) 481
Eam1104I CTCTTC 3 cut(s) 493, 932, 1442
EarI CTCTTC 3 cut(s) 493, 932, 1442
Eco130I CCWWGG 2 cut(s) 715, 1322
Eco147I AGGCCT 1 cut(s) 910
Eco24I GRGCYC 1 cut(s) 606
Eco72I CACGTG 1 cut(s) 917
Eco88I CYCGRG 1 cut(s) 657
EcoRI GAATTC 3 cut(s) 4, 80, 722
EcoRII CCWGG 4 cut(s) 307, 525, 829, 901
EcoT14I CCWWGG 2 cut(s) 715, 1322
EcoT22I ATGCAT 1 cut(s) 575
EcoT38I GRGCYC 1 cut(s) 606
ErhI CCWWGG 2 cut(s) 715, 1322
FalI AAGNNNNNCTT 2 cut(s) 1295, 1327
FaqI GGGAC 1 cut(s) 289
FauI CCCGC 1 cut(s) 521
Fnu4HI GCNGC 6 cut(s) 255, 517, 786, 1051, 1194, 1331
FokI GGATG 3 cut(s) 363, 582, 816
FriOI GRGCYC 1 cut(s) 606
Fsp4HI GCNGC 6 cut(s) 255, 517, 786, 1051, 1194, 1331
FspBI CTAG 3 cut(s) 224, 479, 1296
GluI GCNGC 6 cut(s) 255, 517, 786, 1051, 1194, 1331
GsaI CCCAGC 1 cut(s) 231
HaeIII GGCC 2 cut(s) 910, 1208
HapII CCGG 2 cut(s) 1119, 1167
Hin1I GRCGYC 2 cut(s) 302, 648
HincII GTYRAC 2 cut(s) 54, 1075
HindII GTYRAC 2 cut(s) 54, 1075
HindIII AAGCTT 1 cut(s) 1026
HinfI GANTC 4 cut(s) 435, 475, 679, 1405
HpaI GTTAAC 1 cut(s) 54
HpaII CCGG 2 cut(s) 1119, 1167
HphI GGTGA 1 cut(s) 752
Hpy166II GTNNAC 3 cut(s) 54, 1075, 1287
Hpy188I TCNGA 7 cut(s) 45, 381, 462, 510, 635, 643, 1344
Hpy188III TCNNGA 1 cut(s) 1154
Hpy8I GTNNAC 3 cut(s) 54, 1075, 1287
HpyAV CCTTC 2 cut(s) 860, 1297
HpyCH4III ACNGT 6 cut(s) 355, 611, 755, 782, 1109, 1249
HpyCH4IV ACGT 5 cut(s) 302, 648, 916, 1071, 1349
HpyCH4V TGCA 8 cut(s) 573, 582, 730, 785, 809, 1050, 1128, 1448
HpyF10VI GCNNNNNNNGC 7 cut(s) 536, 545, 579, 791, 938, 1220, 1327
HpyF3I CTNAG 2 cut(s) 854, 1175
HpySE526I ACGT 5 cut(s) 302, 648, 916, 1071, 1349
Hsp92I GRCGYC 2 cut(s) 302, 648
KpnI GGTACC 2 cut(s) 1173, 1275
KspAI GTTAAC 1 cut(s) 54
Kzo9I GATC 4 cut(s) 40, 661, 878, 934
LguI GCTCTTC 1 cut(s) 1442
Lsp1109I GCAGC 5 cut(s) 241, 528, 797, 1062, 1342
LweI GCATC 1 cut(s) 560
MaeI CTAG 3 cut(s) 224, 479, 1296
MaeII ACGT 5 cut(s) 302, 648, 916, 1071, 1349
MaeIII GTNAC 7 cut(s) 10, 162, 298, 587, 611, 897, 1409
MalI GATC 4 cut(s) 42, 663, 880, 936
MboI GATC 4 cut(s) 40, 661, 878, 934
MboII GAAGA 7 cut(s) 394, 510, 681, 919, 1153, 1392, 1429
MflI RGATCY 2 cut(s) 661, 878
MhlI GDGCHC 2 cut(s) 93, 606
MlyI GAGTC 2 cut(s) 444, 469
MnlI CCTC 7 cut(s) 310, 529, 649, 896, 1024, 1184, 1198
Mph1103I ATGCAT 1 cut(s) 575
MroXI GAANNNNTTC 2 cut(s) 389, 502
MseI TTAA 7 cut(s) 53, 137, 350, 447, 1001, 1104, 1376
MspA1I CMGCKG 2 cut(s) 254, 1196
MspI CCGG 2 cut(s) 1119, 1167
MspR9I CCNGG 5 cut(s) 309, 527, 831, 903, 1167
Mva1269I GAATGC 1 cut(s) 1149
MvaI CCWGG 4 cut(s) 309, 527, 831, 903
MwoI GCNNNNNNNGC 7 cut(s) 536, 545, 579, 791, 938, 1220, 1327
NciI CCSGG 1 cut(s) 1167
NcoI CCATGG 1 cut(s) 1322
NdeII GATC 4 cut(s) 40, 661, 878, 934
NlaIV GGNNCC 3 cut(s) 1117, 1171, 1273
NmuCI GTSAC 3 cut(s) 298, 587, 611
NsiI ATGCAT 1 cut(s) 575
NspI RCATGY 2 cut(s) 221, 586
PaeI GCATGC 1 cut(s) 221
PagI TCATGA 1 cut(s) 1153
PceI AGGCCT 1 cut(s) 910
PciSI GCTCTTC 1 cut(s) 1442
PctI GAATGC 1 cut(s) 1149
PdmI GAANNNNTTC 2 cut(s) 389, 502
PfeI GAWTC 2 cut(s) 679, 1405
PkrI GCNGC 6 cut(s) 256, 518, 787, 1052, 1195, 1332
PleI GAGTC 2 cut(s) 443, 469
PmaCI CACGTG 1 cut(s) 917
PmlI CACGTG 1 cut(s) 917
PpsI GAGTC 2 cut(s) 443, 469
Ppu21I YACGTR 1 cut(s) 917
PsiI TTATAA 1 cut(s) 702
Psp6I CCWGG 4 cut(s) 307, 525, 829, 901
PspCI CACGTG 1 cut(s) 917
PspFI CCCAGC 1 cut(s) 227
PspGI CCWGG 4 cut(s) 307, 525, 829, 901
PspN4I GGNNCC 3 cut(s) 1117, 1171, 1273
PsuI RGATCY 2 cut(s) 661, 878
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 6 cut(s) 147, 233, 375, 776, 1171, 1273
RsaNI GTAC 6 cut(s) 146, 232, 374, 775, 1170, 1272
SapI GCTCTTC 1 cut(s) 1442
SaqAI TTAA 7 cut(s) 53, 137, 350, 447, 1001, 1104, 1376
SatI GCNGC 6 cut(s) 255, 517, 786, 1051, 1194, 1331
Sau3AI GATC 4 cut(s) 40, 661, 878, 934
SchI GAGTC 2 cut(s) 444, 469
ScrFI CCNGG 5 cut(s) 309, 527, 831, 903, 1167
SduI GDGCHC 2 cut(s) 93, 606
SfaNI GCATC 1 cut(s) 560
SfcI CTRYAG 1 cut(s) 607
SmlI CTYRAG 2 cut(s) 533, 1215
SmoI CTYRAG 2 cut(s) 533, 1215
SphI GCATGC 1 cut(s) 221
SseBI AGGCCT 1 cut(s) 910
SsiI CCGC 3 cut(s) 432, 514, 1194
SspI AATATT 1 cut(s) 123
SspMI CTAG 3 cut(s) 224, 479, 1296
StuI AGGCCT 1 cut(s) 910
StyD4I CCNGG 5 cut(s) 307, 525, 829, 901, 1165
StyI CCWWGG 2 cut(s) 715, 1322
TaaI ACNGT 6 cut(s) 355, 611, 755, 782, 1109, 1249
TaiI ACGT 5 cut(s) 305, 651, 919, 1074, 1352
TaqI TCGA 4 cut(s) 78, 175, 438, 550
TatI WGTACW 1 cut(s) 145
TauI GCSGC 1 cut(s) 1196
TfiI GAWTC 2 cut(s) 679, 1405
Tru1I TTAA 7 cut(s) 53, 137, 350, 447, 1001, 1104, 1376
Tru9I TTAA 7 cut(s) 53, 137, 350, 447, 1001, 1104, 1376
TscAI CASTG 5 cut(s) 286, 303, 601, 771, 1183
TseFI GTSAC 3 cut(s) 298, 587, 611
TseI GCWGC 5 cut(s) 254, 516, 785, 1050, 1330
Tsp45I GTSAC 3 cut(s) 298, 587, 611
TspDTI ATGAA 7 cut(s) 17, 50, 347, 401, 715, 1142, 1418
TspGWI ACGGA 2 cut(s) 682, 878
TspRI CASTG 5 cut(s) 286, 303, 601, 771, 1183
XapI RAATTY 6 cut(s) 4, 80, 128, 177, 553, 722
XceI RCATGY 2 cut(s) 221, 586
XcmI CCANNNNNNNNNTGG 1 cut(s) 797
XmnI GAANNNNTTC 2 cut(s) 389, 502
XspI CTAG 3 cut(s) 224, 479, 1296
ZraI GACGTC 2 cut(s) 303, 649
Zsp2I ATGCAT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.