Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0000881

Physical Location & Seq

Genomic Coordinates Forward (+)

5664609 .. 5670424

Gene Structure 5816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g05800.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGTATATCTATGAAATGGCCAACGTGGCATCATCCGGAAGGATCAAGGACCGGAAGATCCTCGTCTTCTTCCGTCTAATTTCGAAACTCACCGAGTTCATTGCTTTCACGAGCATTTGCTTGTTGGGTTTTGGTTTTCCAGAGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGATTCGTTGGGCAGGCAGTCATCAACCATGACGGTCACACCGCAGATTTCGATCAATGATGGGAACCTGGTGGTTCATGGAAAGACCATTTTGACTGGGGTTCCGGACAACATCGTTCTGACACCGGGGACCGGTGTCGGGCTCCTTGCCGGTGCTTTCATTGGTGCCACGGCCGCCCACAGCAAAAGCCTCCATATCTTCCCCATTGGGATTTTAGAGGATCTCCGTTTCATGTGCTGTTTTCGATTCAAGTTGTGGTGGATGACTCAGAGGATGGGGACATGTGGGAAGGATGTTCCATTGGAGACCCAATTCATGCTTGTGGAGAGCAAAGGTGGCGGTGATGGAGGTGAAGAAGACGATTCTTCTTCTATCATCTACACCGTGTTCCTGCCTCTACTCGAGGGCCCTTTCCGCTCTGTTCTGCAAGGCAATGAGAGGAACGAAGTCGAGGTTTGCCTCGAGAGTGGAGATTCTGCTGTTCAGACCAATCAAGGCCAGTGCCTCGTTTACGTGCACGCTGGAACCAATCCATTTGAAGTCATCACCCAAGCTGTAAAGGCTGTGGAAAAACACATGAAAACTTTTGTTCATCGCGAGAAGAAAAAGTTGCCTTCTTTTCTGGACTGGTTTGGCTGGTGTACATGGGATGCCTTTTACACCGATGTCACAGCTGAGGGTGTGGATCAAGGCCTTAAAAGCTTATCGGAGGGAGGGACGCCTCCGCGGTTCCTAATCGTTGACGACGGTTGGCAACAGATTGAAAATAAAGACAAGGATTCTGGTGTTGTTGTACAAGAAGGAGCACAGTTTGCAAGTAGGTTGACAGGAATCAAAGAGAACGAAAAATTCCAAAAGAATGACCACAACAATGAGCAAGTCTCTGGCCTGAAACACGTTGTGGATGAAGCCAAGCAGCATCACAATGTGAAATTTGTGTATGTATGGCATGCTCTAGCTGGGTACTGGGGTGGAGTAAAACCAGCTGCTACTGGCATGGAACACTATGACACTGCTTTAGCATACCCAGTGACGTCCCCTGGTGTAGAGGGCAACCAACCAGATATAGTTATGGACAGCTTAACTGTTCATGGTCTTGGTTTGGTACATCCGAAGAAAGTTTTCAATTTCTACAATGAGCTTCATTCCTACTTGGCTTCCTGTGGAGTCGATGGAGTTAAGGTTGATGTTCAGAACATCATCGAGACTCTAGGGTCTGGTCATGGTGGAAGAGTTTCTCTGACCCGCAGCTACCACCAGGCACTTGAGGCTTCGGTTGCTCGAAATTTTGCTGACAATGGATGCATTTCTTGCATGTGTCACAACACTGATGGGCTCTACAGTGCCAAGCAGACTGCTGTGGTCAGAGCCTCTGATGACTTCTATCCCCGAGATCCTGCTTCACACACGATTCACATATCTTCCGTTGCTTATAACACCCTGTTCCTTGGAGAATTCATGCAACCTGACTGGGATATGTTTCACAGTTTGCACCCAGCGGCAGAGTACCACGGTGCAGCCCGTGCTCTTGGTGGATGTGCGATCTATGTGAGTGATAAGCCAGGCAATCACAATTTTGACCTCCTAAGGAAGCTGGTTCTCCCTGATGGATCTGTCCTCCGTGCCAAGTTACCTGGCAGGCCTACACGTGATTGTCTCTTCGCTGATCCAGCAAGAGACAGGACAAGCTTGCTCAAAATATGGAATGTCAACAATCTCTCTGGTGTGGTTGGTGTGTTTAACTGTCAAGGTGCCGGTTGGTGCAAGATTGAAAAGAAGACACGCATTCATGATTACTCTCCCGGTACCCTCAGTGGTTCTGTTCGTGCTGCTGATGTTGACGCCATTGCTCAAGTTGCTGGTGCTGATTGGAATGGAGAAACAGTAGTTTATGCTCATAAGTCAGGTGATGTTCTTCGGTTGCCAAAAGGTGCTTCAGTGCCTGTGACTCTTAAAGTTCTTGACTATGAGGTTTTCCATTTCTGTCCTCTCAAGGAAATTACATCCGACCTCTCATTTGCACCAATAGGCCTACTTGACATGTTCAATTCAAGTGCTGCTGTGGAGCAGGTTGAAATCCAATTGGCTTCTGACAAGAAACCTGAGCTTTCTAATGGAGAAGTTAGCGAGAACCGATCCCCAACTGCAACAATTGGTCTCAAAACCAGAGGATGTGGAAGGTTTGGAGCATACTGTTCCCAGCGGCCGCTGAAGTGCACTGTTGACAACGCCGAGACCAACTTCGAGTATGACTCTGCATCTGGATTAACGACGATTACCATCCTGGTACCAGAAAAAGAGATGTACAGATGGTCAGTAGAGATCCAAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004557 GO:0005575 GO:0005911 GO:0005975 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009311 GO:0009313 GO:0009506 GO:0009628 GO:0015925 GO:0016052 GO:0016787 GO:0016798 GO:0030054 GO:0033530 GO:0034484 GO:0044238 GO:0050896 GO:0052692 GO:0055044 GO:0071704 GO:0080167 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Raffinose_syn

Protein Analysis

840

Amino Acids

91.86

Weight (kDa)

5.85

Isoelectric Point (pI)

31.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57520 AT3G57520 AT3G57520
fragaria_vesca	FvH4_3g00160 FvH4_6g23550 FvH4_6g23550 FvH4_6g23550 FvH4_6g23550
malus_domestica	MD09G1161700.v1.1 MD09G1162100.v1.1 MD10G1341400.v1.1 MD10G1341500.v1.1 MD10G1341600.v1.1 MD12G1077800.v1.1 MD14G1070300.v1.1
prunus_persica	Prupe.4G001700_v2.0.a1 Prupe.5G162400_v2.0.a1 Prupe.5G162400_v2.0.a1 Prupe.7G064000_v2.0.a1 Prupe.7G064000_v2.0.a1
pyrus_communis	pycom10g29090 pycom12g06210 pycom14g05800 pycom14g05880 pycom14g05890 pycom14g05910 pycom14g05930
rosa_chinensis	RchiOBHm_Chr3g0481621 RchiOBHm_Chr5g0000211 RchiOBHm_Chr7g0192011 RchiOBHm_Chr7g0192021
rosa_laevigata	RLG00000004409 RLG00000023385 RLG00000030850
rosa_multiflora	Rmu_co8093432.1_g000001 Rmu_co8314355.1_g000001 Rmu_sc0010409.1_g000002 Rmu_sc0021936.1_g000002 Rmu_ssc0000243.1_g000010 Rmu_ssc0000421.1_g000033
rosa_roxburghii	Rroxscaffold_1G00075890 Rroxscaffold_3G00263360 Rroxscaffold_6G00400310
rosa_rugosa	Rorug03G0192700 Rorug03G0192800 Rorug03G0192900 Rorug04G0382500 Rorug06G0512300 Rorug06G0512300
rosa_samantha	Rh3AG244100 Rh3BG279100 Rh3BG279300 Rh3CG274100 Rh3DG270900 Rh5AG001400 Rh5BG002800 Rh5CG001700 Rh5DG001600 Rh7AG122700 Rh7AG122800 Rh7BG124300 Rh7CG127000 Rh7DG125800
rosa_wichuraiana	Rw3G021800 Rw5G000190 Rw7G010450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1620
AasI	GACNNNNNNGTC	1 cut(s)	1399
AatII	GACGTC	1 cut(s)	1223
Acc36I	ACCTGC	1 cut(s)	2245
Acc65I	GGTACC	2 cut(s)	1991, 2473
AccB1I	GGYRCC	4 cut(s)	350, 1937, 1991, 2473
AccBSI	CCGCTC	1 cut(s)	603
AccII	CGCG	2 cut(s)	783, 913
AccIII	TCCGGA	2 cut(s)	35, 289
AclWI	GGATC	9 cut(s)	50, 52, 414, 879, 1574, 1804, 1847, 2316, 2503
AcoI	YGGCCR	3 cut(s)	18, 357, 2390
AcsI	RAATTY	4 cut(s)	1034, 1118, 1471, 1640
AcuI	CTGAAG	2 cut(s)	2106, 2417
AcvI	CACGTG	1 cut(s)	1835
AcyI	GRCGYC	3 cut(s)	905, 1220, 2028
AdeI	CACNNNGTG	2 cut(s)	1087, 1114
AfaI	GTAC	8 cut(s)	829, 981, 1151, 1293, 1694, 1993, 2475, 2492
AfiI	CCNNNNNNNGG	2 cut(s)	317, 324
AflIII	ACRYGT	4 cut(s)	467, 1081, 1832, 2226
AgeI	ACCGGT	1 cut(s)	317
AgsI	TTSAA	8 cut(s)	436, 725, 950, 1312, 1958, 2233, 2238, 2261
AjnI	CCWGG	6 cut(s)	252, 1225, 1443, 1747, 1819, 2469
AjuI	GAANNNNNNNTTGG	2 cut(s)	2104, 2136
Alw21I	GWGCWC	4 cut(s)	705, 994, 1714, 2405
Alw26I	GTCTC	7 cut(s)	485, 1072, 1385, 1847, 1857, 2348, 2414
Alw44I	GTGCAC	2 cut(s)	701, 2401
AlwI	GGATC	9 cut(s)	50, 52, 414, 879, 1574, 1804, 1847, 2316, 2503
AlwNI	CAGNNNCTG	1 cut(s)	2129
Ama87I	CYCGRG	3 cut(s)	587, 647, 1575
Aor13HI	TCCGGA	2 cut(s)	35, 289
AoxI	GGCC	9 cut(s)	18, 357, 592, 682, 877, 1072, 1826, 2215, 2390
ApaI	GGGCCC	1 cut(s)	596
ApaLI	GTGCAC	2 cut(s)	701, 2401
ApeKI	GCWGC	6 cut(s)	1102, 1172, 1434, 1703, 2015, 2243
ApoI	RAATTY	4 cut(s)	1034, 1118, 1471, 1640
ArsI	GACNNNNNNTTYG	2 cut(s)	2186, 2218
AsiGI	ACCGGT	1 cut(s)	317
Asp700I	GAANNNNTTC	2 cut(s)	1307, 1420
Asp718I	GGTACC	2 cut(s)	1991, 2473
AspS9I	GGNCC	4 cut(s)	49, 315, 592, 593
AsuC2I	CCSGG	2 cut(s)	312, 1989
AsuHPI	GGTGA	5 cut(s)	82, 539, 548, 724, 2105
AsuII	TTCGAA	1 cut(s)	83
AvaI	CYCGRG	3 cut(s)	587, 647, 1575
AvaII	GGWCC	2 cut(s)	49, 315
AxyI	CCTNAGG	1 cut(s)	1772
BaeGI	GKGCMC	3 cut(s)	596, 705, 2405
BaeI	ACNNNNGTAYC	2 cut(s)	1141, 1174
BalI	TGGCCA	1 cut(s)	20
BanI	GGYRCC	4 cut(s)	350, 1937, 1991, 2473
BanII	GRGCYC	3 cut(s)	330, 596, 1524
BauI	CACGAG	1 cut(s)	109
BbrPI	CACGTG	1 cut(s)	1835
BbsI	GAAGAC	3 cut(s)	58, 549, 1970
Bbv12I	GWGCWC	4 cut(s)	705, 994, 1714, 2405
BbvCI	CCTCAGC	1 cut(s)	861
BbvI	GCAGC	6 cut(s)	1114, 1159, 1446, 1715, 2002, 2230
BccI	CCATC	8 cut(s)	239, 454, 524, 1352, 1511, 1787, 2474, 2490
BceAI	ACGGC	1 cut(s)	372
BcgI	CGANNNNNNTGC	2 cut(s)	83, 117
BciT130I	CCWGG	6 cut(s)	254, 1227, 1445, 1749, 1821, 2471
BcnI	CCSGG	2 cut(s)	312, 1989
BcoDI	GTCTC	7 cut(s)	485, 1072, 1385, 1847, 1857, 2348, 2414
BfaI	CTAG	3 cut(s)	185, 1142, 1397
BfmI	CTRYAG	1 cut(s)	1525
BfuAI	ACCTGC	1 cut(s)	2245
BglI	GCCNNNNNGGC	1 cut(s)	26
Bme1390I	CCNGG	8 cut(s)	254, 312, 1227, 1445, 1749, 1821, 1989, 2471
Bme18I	GGWCC	2 cut(s)	49, 315
BmeT110I	CYCGRG	3 cut(s)	587, 647, 1575
BmgT120I	GGNCC	4 cut(s)	49, 315, 592, 593
BmrFI	CCNGG	8 cut(s)	254, 312, 1227, 1445, 1749, 1821, 1989, 2471
BmrI	ACTGGG	4 cut(s)	291, 1162, 1208, 1666
BmsI	GCATC	5 cut(s)	38, 826, 1114, 1478, 2453
BmuI	ACTGGG	4 cut(s)	291, 1162, 1208, 1666
BoxI	GACNNNNGTC	1 cut(s)	320
BpiI	GAAGAC	3 cut(s)	58, 549, 1970
BplI	GAGNNNNNCTC	6 cut(s)	134, 166, 1052, 1084, 2423, 2455
Bpu10I	CCTNAGC	2 cut(s)	861, 2289
Bpu14I	TTCGAA	1 cut(s)	83
BpuEI	CTTGAG	3 cut(s)	1472, 2022, 2162
BpuMI	CCSGG	2 cut(s)	312, 1989
BsaAI	YACGTR	2 cut(s)	700, 1835
BsaBI	GATNNNNATC	2 cut(s)	236, 2465
BsaHI	GRCGYC	3 cut(s)	905, 1220, 2028
BsaI	GGTCTC	3 cut(s)	485, 2348, 2414
BsaJI	CCNNGG	6 cut(s)	311, 354, 911, 1225, 1633, 1696
BsaWI	WCCGGW	4 cut(s)	35, 51, 289, 317
BsaXI	ACNNNNNCTCC	4 cut(s)	1353, 1383, 2055, 2085
Bsc4I	CCNNNNNNNGG	2 cut(s)	317, 324
Bse118I	RCCGGY	3 cut(s)	317, 335, 1940
Bse1I	ACTGG	7 cut(s)	286, 685, 818, 1157, 1183, 1214, 1661
Bse21I	CCTNAGG	1 cut(s)	1772
Bse3DI	GCAATG	3 cut(s)	99, 625, 2031
Bse8I	GATNNNNATC	2 cut(s)	236, 2465
BseAI	TCCGGA	2 cut(s)	35, 289
BseBI	CCWGG	6 cut(s)	254, 1227, 1445, 1749, 1821, 2471
BseDI	CCNNGG	6 cut(s)	311, 354, 911, 1225, 1633, 1696
BseJI	GATNNNNATC	2 cut(s)	236, 2465
BseLI	CCNNNNNNNGG	2 cut(s)	317, 324
BseMI	GCAATG	3 cut(s)	99, 625, 2031
BseMII	CTCAG	4 cut(s)	467, 852, 2011, 2280
BseNI	ACTGG	7 cut(s)	286, 685, 818, 1157, 1183, 1214, 1661
BseSI	GKGCMC	3 cut(s)	596, 705, 2405
BseX3I	CGGCCG	2 cut(s)	357, 2390
BseXI	GCAGC	6 cut(s)	1114, 1159, 1446, 1715, 2002, 2230
BseYI	CCCAGC	3 cut(s)	1145, 1681, 2385
BsgI	GTGCAG	1 cut(s)	1722
Bsh1236I	CGCG	2 cut(s)	783, 913
Bsh1285I	CGRYCG	2 cut(s)	360, 2393
BshFI	GGCC	9 cut(s)	20, 359, 594, 684, 879, 1074, 1828, 2217, 2392
BshNI	GGYRCC	4 cut(s)	350, 1937, 1991, 2473
BshTI	ACCGGT	1 cut(s)	317
BsiEI	CGRYCG	2 cut(s)	360, 2393
BsiHKAI	GWGCWC	4 cut(s)	705, 994, 1714, 2405
BsiHKCI	CYCGRG	3 cut(s)	587, 647, 1575
BsiSI	CCGG	8 cut(s)	36, 52, 290, 311, 318, 336, 1941, 1989
BslFI	GGGAC	4 cut(s)	328, 478, 916, 1207
BslI	CCNNNNNNNGG	2 cut(s)	317, 324
BsmAI	GTCTC	7 cut(s)	485, 1072, 1385, 1847, 1857, 2348, 2414
BsmFI	GGGAC	4 cut(s)	328, 478, 916, 1207
BsmI	GAATGC	1 cut(s)	1971
BsnI	GGCC	9 cut(s)	20, 359, 594, 684, 879, 1074, 1828, 2217, 2392
Bso31I	GGTCTC	3 cut(s)	485, 2348, 2414
BsoBI	CYCGRG	3 cut(s)	587, 647, 1575
Bsp119I	TTCGAA	1 cut(s)	83
Bsp120I	GGGCCC	1 cut(s)	592
Bsp1286I	GDGCHC	7 cut(s)	330, 596, 705, 994, 1524, 1714, 2405
Bsp13I	TCCGGA	2 cut(s)	35, 289
Bsp1407I	TGTACA	3 cut(s)	827, 979, 2490
Bsp68I	TCGCGA	1 cut(s)	783
BspANI	GGCC	9 cut(s)	20, 359, 594, 684, 879, 1074, 1828, 2217, 2392
BspCNI	CTCAG	4 cut(s)	466, 853, 2010, 2281
BspEI	TCCGGA	2 cut(s)	35, 289
BspFNI	CGCG	2 cut(s)	783, 913
BspHI	TCATGA	1 cut(s)	1975
BspMI	ACCTGC	1 cut(s)	2245
BspPI	GGATC	9 cut(s)	50, 52, 414, 879, 1574, 1804, 1847, 2316, 2503
BspT104I	TTCGAA	1 cut(s)	83
BspT107I	GGYRCC	4 cut(s)	350, 1937, 1991, 2473
BspTNI	GGTCTC	3 cut(s)	485, 2348, 2414
BsrBI	CCGCTC	1 cut(s)	603
BsrDI	GCAATG	3 cut(s)	99, 625, 2031
BsrFI	RCCGGY	3 cut(s)	317, 335, 1940
BsrGI	TGTACA	3 cut(s)	827, 979, 2490
BsrI	ACTGG	7 cut(s)	286, 685, 818, 1157, 1183, 1214, 1661
BssAI	RCCGGY	3 cut(s)	317, 335, 1940
BssECI	CCNNGG	6 cut(s)	311, 354, 911, 1225, 1633, 1696
BssNI	GRCGYC	3 cut(s)	905, 1220, 2028
BssSI	CACGAG	1 cut(s)	109
BssT1I	CCWWGG	1 cut(s)	1633
Bst2BI	CACGAG	1 cut(s)	109
Bst2UI	CCWGG	6 cut(s)	254, 1227, 1445, 1749, 1821, 2471
Bst6I	CTCTTC	2 cut(s)	1411, 1850
BstACI	GRCGYC	3 cut(s)	905, 1220, 2028
BstAPI	GCANNNNNTGC	3 cut(s)	998, 1497, 1709
BstAUI	TGTACA	3 cut(s)	827, 979, 2490
BstBAI	YACGTR	2 cut(s)	700, 1835
BstBI	TTCGAA	1 cut(s)	83
BstC8I	GCNNGC	5 cut(s)	200, 705, 1137, 1826, 1877
BstDEI	CTNAG	5 cut(s)	453, 861, 1772, 1997, 2289
BstDSI	CCRYGG	3 cut(s)	354, 911, 1696
BstFNI	CGCG	2 cut(s)	783, 913
BstMAI	GTCTC	7 cut(s)	485, 1072, 1385, 1847, 1857, 2348, 2414
BstMCI	CGRYCG	2 cut(s)	360, 2393
BstNI	CCWGG	6 cut(s)	254, 1227, 1445, 1749, 1821, 2471
BstNSI	RCATGY	4 cut(s)	471, 1139, 1504, 2230
BstPAI	GACNNNNGTC	1 cut(s)	320
BstSCI	CCNGG	8 cut(s)	252, 310, 1225, 1443, 1747, 1819, 1987, 2469
BstSFI	CTRYAG	1 cut(s)	1525
BstSLI	GKGCMC	3 cut(s)	596, 705, 2405
BstUI	CGCG	2 cut(s)	783, 913
BstV1I	GCAGC	6 cut(s)	1114, 1159, 1446, 1715, 2002, 2230
BstV2I	GAAGAC	3 cut(s)	58, 549, 1970
BstX2I	RGATCY	5 cut(s)	57, 406, 1579, 1796, 2508
BstYI	RGATCY	5 cut(s)	57, 406, 1579, 1796, 2508
BstZI	CGGCCG	2 cut(s)	357, 2390
Bsu36I	CCTNAGG	1 cut(s)	1772
BsuRI	GGCC	9 cut(s)	20, 359, 594, 684, 879, 1074, 1828, 2217, 2392
BtgI	CCRYGG	3 cut(s)	354, 911, 1696
BtgZI	GCGATG	1 cut(s)	764
BtsI	GCAGTG	1 cut(s)	1197
BtsIMutI	CAGTG	8 cut(s)	692, 1197, 1221, 1512, 1534, 2005, 2130, 2403
BtuMI	TCGCGA	1 cut(s)	783
BveI	ACCTGC	1 cut(s)	2245
Cac8I	GCNNGC	5 cut(s)	200, 705, 1137, 1826, 1877
CaiI	CAGNNNCTG	1 cut(s)	2129
CciI	TCATGA	1 cut(s)	1975
CciNI	GCGGCCGC	1 cut(s)	2390
Cfr10I	RCCGGY	3 cut(s)	317, 335, 1940
Cfr13I	GGNCC	4 cut(s)	49, 315, 592, 593
Cfr42I	CCGCGG	1 cut(s)	914
CseI	GACGC	2 cut(s)	913, 2036
CsiI	ACCWGGT	1 cut(s)	252
Csp6I	GTAC	8 cut(s)	828, 980, 1150, 1292, 1693, 1992, 2474, 2491
CspAI	ACCGGT	1 cut(s)	317
CviQI	GTAC	8 cut(s)	828, 980, 1150, 1292, 1693, 1992, 2474, 2491
DdeI	CTNAG	5 cut(s)	453, 861, 1772, 1997, 2289
DraIII	CACNNNGTG	2 cut(s)	1087, 1114
DrdI	GACNNNNNNGTC	1 cut(s)	1399
DseDI	GACNNNNNNGTC	1 cut(s)	1399
EaeI	YGGCCR	3 cut(s)	18, 357, 2390
EagI	CGGCCG	2 cut(s)	357, 2390
Eam1104I	CTCTTC	2 cut(s)	1411, 1850
EarI	CTCTTC	2 cut(s)	1411, 1850
EclXI	CGGCCG	2 cut(s)	357, 2390
Eco130I	CCWWGG	1 cut(s)	1633
Eco147I	AGGCCT	3 cut(s)	879, 1828, 2217
Eco24I	GRGCYC	3 cut(s)	330, 596, 1524
Eco31I	GGTCTC	3 cut(s)	485, 2348, 2414
Eco47I	GGWCC	2 cut(s)	49, 315
Eco52I	CGGCCG	2 cut(s)	357, 2390
Eco57I	CTGAAG	2 cut(s)	2106, 2417
Eco72I	CACGTG	1 cut(s)	1835
Eco81I	CCTNAGG	1 cut(s)	1772
Eco88I	CYCGRG	3 cut(s)	587, 647, 1575
EcoO109I	RGGNCCY	2 cut(s)	592, 593
EcoRI	GAATTC	1 cut(s)	1640
EcoRII	CCWGG	6 cut(s)	252, 1225, 1443, 1747, 1819, 2469
EcoT14I	CCWWGG	1 cut(s)	1633
EcoT22I	ATGCAT	1 cut(s)	1493
EcoT38I	GRGCYC	3 cut(s)	330, 596, 1524
ErhI	CCWWGG	1 cut(s)	1633
FaqI	GGGAC	4 cut(s)	328, 478, 916, 1207
FauI	CCCGC	1 cut(s)	1439
FriOI	GRGCYC	3 cut(s)	330, 596, 1524
FspBI	CTAG	3 cut(s)	185, 1142, 1397
GsaI	CCCAGC	3 cut(s)	1149, 1685, 2389
HaeIII	GGCC	9 cut(s)	20, 359, 594, 684, 879, 1074, 1828, 2217, 2392
HapII	CCGG	8 cut(s)	36, 52, 290, 311, 318, 336, 1941, 1989
HgaI	GACGC	2 cut(s)	913, 2036
Hin1I	GRCGYC	3 cut(s)	905, 1220, 2028
HincII	GTYRAC	5 cut(s)	928, 1011, 1897, 2026, 2410
HindII	GTYRAC	5 cut(s)	928, 1011, 1897, 2026, 2410
HindIII	AAGCTT	2 cut(s)	886, 1873
HpaII	CCGG	8 cut(s)	36, 52, 290, 311, 318, 336, 1941, 1989
HphI	GGTGA	5 cut(s)	82, 539, 548, 724, 2105
Hpy166II	GTNNAC	9 cut(s)	697, 703, 828, 928, 1011, 1897, 2026, 2403, 2410
Hpy8I	GTNNAC	9 cut(s)	697, 703, 828, 928, 1011, 1897, 2026, 2403, 2410
Hpy99I	CGWCG	2 cut(s)	935, 2461
HpyAV	CCTTC	5 cut(s)	33, 469, 810, 980, 2358
HpyCH4IV	ACGT	5 cut(s)	24, 699, 1083, 1220, 1834
HpyF3I	CTNAG	5 cut(s)	453, 861, 1772, 1997, 2289
HpySE526I	ACGT	5 cut(s)	24, 699, 1083, 1220, 1834
Hsp92I	GRCGYC	3 cut(s)	905, 1220, 2028
Kpn2I	TCCGGA	2 cut(s)	35, 289
KpnI	GGTACC	2 cut(s)	1995, 2477
KspI	CCGCGG	1 cut(s)	914
LmnI	GCTCC	4 cut(s)	333, 989, 2251, 2372
Lsp1109I	GCAGC	6 cut(s)	1114, 1159, 1446, 1715, 2002, 2230
LweI	GCATC	5 cut(s)	38, 826, 1114, 1478, 2453
MabI	ACCWGGT	1 cut(s)	252
MaeI	CTAG	3 cut(s)	185, 1142, 1397
MaeII	ACGT	5 cut(s)	24, 699, 1083, 1220, 1834
MaeIII	GTNAC	6 cut(s)	220, 853, 1216, 1505, 1815, 2131
MbiI	CCGCTC	1 cut(s)	603
MfeI	CAATTG	2 cut(s)	2267, 2337
MflI	RGATCY	5 cut(s)	57, 406, 1579, 1796, 2508
MhlI	GDGCHC	7 cut(s)	330, 596, 705, 994, 1524, 1714, 2405
MlsI	TGGCCA	1 cut(s)	20
MluNI	TGGCCA	1 cut(s)	20
MlyI	GAGTC	5 cut(s)	445, 1362, 1387, 2128, 2432
MmeI	TCCRAC	1 cut(s)	2217
Mox20I	TGGCCA	1 cut(s)	20
Mph1103I	ATGCAT	1 cut(s)	1493
MroI	TCCGGA	2 cut(s)	35, 289
MroXI	GAANNNNTTC	2 cut(s)	1307, 1420
MscI	TGGCCA	1 cut(s)	20
MseI	TTAA	6 cut(s)	882, 1268, 1365, 1926, 2139, 2453
MslI	CAYNNNNRTG	3 cut(s)	506, 1056, 1110
Msp20I	TGGCCA	1 cut(s)	20
MspA1I	CMGCKG	6 cut(s)	860, 913, 1172, 1685, 2389, 2395
MspI	CCGG	8 cut(s)	36, 52, 290, 311, 318, 336, 1941, 1989
MspR9I	CCNGG	8 cut(s)	254, 312, 1227, 1445, 1749, 1821, 1989, 2471
MunI	CAATTG	2 cut(s)	2267, 2337
Mva1269I	GAATGC	1 cut(s)	1971
MvaI	CCWGG	6 cut(s)	254, 1227, 1445, 1749, 1821, 2471
MvnI	CGCG	2 cut(s)	783, 913
NciI	CCSGG	2 cut(s)	312, 1989
NmeAIII	GCCGAG	1 cut(s)	2443
NmuCI	GTSAC	5 cut(s)	220, 853, 1216, 1505, 2131
NotI	GCGGCCGC	1 cut(s)	2390
NruI	TCGCGA	1 cut(s)	783
NsiI	ATGCAT	1 cut(s)	1493
NspI	RCATGY	4 cut(s)	471, 1139, 1504, 2230
NspV	TTCGAA	1 cut(s)	83
PaeI	GCATGC	1 cut(s)	1139
PaeR7I	CTCGAG	2 cut(s)	587, 647
PagI	TCATGA	1 cut(s)	1975
PceI	AGGCCT	3 cut(s)	879, 1828, 2217
PciI	ACATGT	2 cut(s)	467, 2226
PctI	GAATGC	1 cut(s)	1971
PdmI	GAANNNNTTC	2 cut(s)	1307, 1420
PfeI	GAWTC	7 cut(s)	188, 432, 548, 659, 965, 1017, 1597
PinAI	ACCGGT	1 cut(s)	317
PleI	GAGTC	5 cut(s)	445, 1361, 1387, 2128, 2432
PmaCI	CACGTG	1 cut(s)	1835
PmlI	CACGTG	1 cut(s)	1835
PpsI	GAGTC	5 cut(s)	445, 1361, 1387, 2128, 2432
Ppu21I	YACGTR	2 cut(s)	700, 1835
PscI	ACATGT	2 cut(s)	467, 2226
PshAI	GACNNNNGTC	1 cut(s)	320
PsiI	TTATAA	1 cut(s)	1620
Psp6I	CCWGG	6 cut(s)	252, 1225, 1443, 1747, 1819, 2469
PspCI	CACGTG	1 cut(s)	1835
PspFI	CCCAGC	3 cut(s)	1145, 1681, 2385
PspGI	CCWGG	6 cut(s)	252, 1225, 1443, 1747, 1819, 2469
PspOMI	GGGCCC	1 cut(s)	592
PspPI	GGNCC	4 cut(s)	49, 315, 592, 593
PspXI	VCTCGAGB	1 cut(s)	587
PstNI	CAGNNNCTG	1 cut(s)	2129
PsuI	RGATCY	5 cut(s)	57, 406, 1579, 1796, 2508
PvuII	CAGCTG	2 cut(s)	860, 1172
RruI	TCGCGA	1 cut(s)	783
RsaI	GTAC	8 cut(s)	829, 981, 1151, 1293, 1694, 1993, 2475, 2492
RsaNI	GTAC	8 cut(s)	828, 980, 1150, 1292, 1693, 1992, 2474, 2491
RseI	CAYNNNNRTG	3 cut(s)	506, 1056, 1110
SacII	CCGCGG	1 cut(s)	914
SaqAI	TTAA	6 cut(s)	882, 1268, 1365, 1926, 2139, 2453
Sau96I	GGNCC	4 cut(s)	49, 315, 592, 593
SchI	GAGTC	5 cut(s)	445, 1362, 1387, 2128, 2432
ScrFI	CCNGG	8 cut(s)	254, 312, 1227, 1445, 1749, 1821, 1989, 2471
SduI	GDGCHC	7 cut(s)	330, 596, 705, 994, 1524, 1714, 2405
SexAI	ACCWGGT	1 cut(s)	252
SfaNI	GCATC	5 cut(s)	38, 826, 1114, 1478, 2453
SfcI	CTRYAG	1 cut(s)	1525
Sfr274I	CTCGAG	2 cut(s)	587, 647
Sfr303I	CCGCGG	1 cut(s)	914
SfuI	TTCGAA	1 cut(s)	83
SgrBI	CCGCGG	1 cut(s)	914
SinI	GGWCC	2 cut(s)	49, 315
SlaI	CTCGAG	2 cut(s)	587, 647
SmiMI	CAYNNNNRTG	3 cut(s)	506, 1056, 1110
SmlI	CTYRAG	5 cut(s)	587, 647, 1451, 2037, 2177
SmoI	CTYRAG	5 cut(s)	587, 647, 1451, 2037, 2177
SphI	GCATGC	1 cut(s)	1139
SseBI	AGGCCT	3 cut(s)	879, 1828, 2217
SspMI	CTAG	3 cut(s)	185, 1142, 1397
StuI	AGGCCT	3 cut(s)	879, 1828, 2217
StyD4I	CCNGG	8 cut(s)	252, 310, 1225, 1443, 1747, 1819, 1987, 2469
StyI	CCWWGG	1 cut(s)	1633
TaiI	ACGT	5 cut(s)	27, 702, 1086, 1223, 1837
TatI	WGTACW	3 cut(s)	827, 979, 2490
TauI	GCSGC	4 cut(s)	362, 1688, 2392, 2395
TfiI	GAWTC	7 cut(s)	188, 432, 548, 659, 965, 1017, 1597
Tru1I	TTAA	6 cut(s)	882, 1268, 1365, 1926, 2139, 2453
Tru9I	TTAA	6 cut(s)	882, 1268, 1365, 1926, 2139, 2453
TscAI	CASTG	8 cut(s)	692, 1204, 1221, 1519, 1534, 2005, 2130, 2410
TseFI	GTSAC	5 cut(s)	220, 853, 1216, 1505, 2131
TseI	GCWGC	6 cut(s)	1102, 1172, 1434, 1703, 2015, 2243
Tsp45I	GTSAC	5 cut(s)	220, 853, 1216, 1505, 2131
TspGWI	ACGGA	4 cut(s)	62, 401, 1600, 1796
TspRI	CASTG	8 cut(s)	692, 1204, 1221, 1519, 1534, 2005, 2130, 2410
VneI	GTGCAC	2 cut(s)	701, 2401
VpaK11BI	GGWCC	2 cut(s)	49, 315
XapI	RAATTY	4 cut(s)	1034, 1118, 1471, 1640
XbaI	TCTAGA	1 cut(s)	184
XceI	RCATGY	4 cut(s)	471, 1139, 1504, 2230
XhoI	CTCGAG	2 cut(s)	587, 647
XmnI	GAANNNNTTC	2 cut(s)	1307, 1420
XspI	CTAG	3 cut(s)	185, 1142, 1397
ZraI	GACGTC	1 cut(s)	1221
Zsp2I	ATGCAT	1 cut(s)	1493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.