Rmu_ssc0000243.1_g000010

Raffinose synthase or seed imbibition protein Sip1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000243.1
OG0000881
Physical Location & Seq
Forward (+)
35373 .. 40809
5437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000243.1_g000010.1.cds

Sequence Viewer

Length: 2235 bp
atgacaaaaagggagacatggatctcgaatgtaaaatgtggtgagcaatcaaaggaagaggcattggagcccatcccaccatctctctatcaatcaatcatctttgtgggattgggaaccaaccaacttaaaccaaccacacagattgccctgccctgccatgcccttctcctctcctcccgctttcatataacggtcaaaaagctgttgccttgccaattgccaattgccatgcttcacagcaccgtcgtttcccccaaggcccttcaactcaatctcggcttctcttcatttctagccacaaaccagaaccagagcaggaggaggaggaggaggatcatcttttgttcacaaaccagagatggttctgtgcgtggtggagttaagactagcactaccagtagtaatggatggagacaatctatgtttgtcagtacgaaacctgcccttgaagattccattctgagtgtcagtggtaaacatgtgttgacagacgtgcctcccaatgtggtcttcacaccaattcccaactcatcggcagcattccttggcgccacttctcaaaatgctacttcacaatcacgccatgtttttaagctcggagtcttacgtgatgtcagattattaagtctttttagatttaaactttggtggatgataccacgagtgggcagtacaggaagtgacatccctgtggaaactcagctgttgctcctagaagcaaaggagaaggagggaaaggaagatagtacatcttatatcttattcttgccagttctggatggtgaatttagaagcagcttgcagggaaatacatccaatgaacttgagttttgcgtcgaaagtggtgaccccgctatagttgcctcagaatccctaaaagcagtttttgtgaattgtgggaaccatcctttcgatctggtgaacgaatctatgaagactttggcgaagcattatggaagctttgctcttagagaaacgaaacagatgcctggaatgctggattgttttggctggtgtacttgggatgccttttatcaaggagttaaccctaaaggaattagagacggcctcagaagtttatcagaaggagggactccagctaagtttttgataatcgatgatgggtggcaagatacatcaaatgagttccaaaaagaaggggagccatttgttgaagggacacagtttggaggcagattaaatagcattgaagaaaataacaagtttcgcagcacaaccaatatggttgatagtgacaaaccaagtggtctcaaggattttgtttctgagatcaagaattcctttggccttagtgacaaacctggccagcatgatttcgagatacttcaaaggcttgttcttcctgatggaacagttctcagagctagatatcctgggaggccatcacgggattgtttatttgttgatccagttatggacgggaagagtcttctgaaaatatggaatttgaacaaatgcaacggagttataggcattttcaattgccaaggagcaggaagctggccttgtctggaacatatcgtccaggtaaaagctagtgaggagctatctgggaaggtctctcctgccgatatcgagtattttgaagaggtatctggaaagctttggactggagattgtgcagtctattccttcaaacaagggtatctgtctcgtttaccgaaggacaagtcagttgatgtcacattacaaattctccaatgcgatgtgtttactgtatgccctattaaggtttacaagcaaaatattcaatttgcacctattggattattgaacatgtacaattccggtggagctgttgacagtattgacttgttcagtgatgcctctagttgtgttatacacatcaaaggaagaggggctggtagctttggagcatactcaagttcaaagcccaaatcttgctcggtgaactcgaaagatgagggatttgaattcagaggtgatgacaatcttctgactgtgacaattcctgccgcaactacccagcccatcatctgtccacagcgcagagccttcgagctccacaactccattgccgcccgacgcgaacgcctcccgacttcctctcccccgacgccatcgccgcctgacgccatcgccttagatcatgcgcccagcccagaagcgagttacgatctgcaccatagttcgaatccaccagaaccaggcacgggccgcacaatcgccatcgtctggagcaaaacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

744

Amino Acids

81.79

Weight (kDa)

7.79

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 451
AccB1I GGYRCC 1 cut(s) 551
AccB7I CCANNNNNTGG 1 cut(s) 2220
AccII CGCG 1 cut(s) 2073
AciI CCGC 6 cut(s) 181, 855, 2001, 2064, 2111, 2203
AclWI GGATC 3 cut(s) 29, 344, 1424
AcoI YGGCCR 1 cut(s) 1327
AcsI RAATTY 5 cut(s) 788, 1300, 1468, 1716, 1958
AcyI GRCGYC 3 cut(s) 552, 2102, 2118
AfaI GTAC 5 cut(s) 436, 676, 751, 1021, 1805
AfiI CCNNNNNNNGG 5 cut(s) 668, 1753, 2192, 2198, 2220
AflIII ACRYGT 2 cut(s) 481, 1800
AjiI CACGTC 1 cut(s) 496
AjnI CCWGG 5 cut(s) 991, 1324, 1396, 1548, 2191
AjuI GAANNNNNNNTTGG 2 cut(s) 497, 529
AloI GAACNNNNNNTCC 2 cut(s) 1530, 1562
Alw21I GWGCWC 1 cut(s) 2049
Alw26I GTCTC 6 cut(s) 8, 409, 1059, 1277, 1588, 1680
AlwI GGATC 3 cut(s) 29, 344, 1424
AoxI GGCC 7 cut(s) 261, 1069, 1309, 1327, 1403, 1526, 2200
ApeKI GCWGC 3 cut(s) 539, 798, 1233
ApoI RAATTY 5 cut(s) 788, 1300, 1468, 1716, 1958
ArsI GACNNNNNNTTYG 2 cut(s) 1679, 1711
AspLEI GCGC 3 cut(s) 554, 2034, 2140
AspS9I GGNCC 2 cut(s) 262, 2200
AsuHPI GGTGA 6 cut(s) 53, 797, 860, 934, 1945, 1979
AsuII TTCGAA 1 cut(s) 2177
BaeI ACNNNNGTAYC 2 cut(s) 1652, 1685
BalI TGGCCA 1 cut(s) 1329
BanI GGYRCC 1 cut(s) 551
BanII GRGCYC 2 cut(s) 72, 2049
BauI CACGAG 1 cut(s) 663
BbsI GAAGAC 3 cut(s) 505, 944, 1445
Bbv12I GWGCWC 1 cut(s) 2049
BbvI GCAGC 3 cut(s) 551, 810, 1245
BceAI ACGGC 1 cut(s) 1084
BcgI CGANNNNNNTGC 4 cut(s) 970, 1004, 2023, 2057
BciT130I CCWGG 5 cut(s) 993, 1326, 1398, 1550, 2193
BcoDI GTCTC 6 cut(s) 8, 409, 1059, 1277, 1588, 1680
BfaI CTAG 7 cut(s) 296, 390, 716, 1389, 1560, 1854, 2233
BfmI CTRYAG 1 cut(s) 858
BfoI RGCGCY 1 cut(s) 555
BfuAI ACCTGC 1 cut(s) 451
BisI GCNGC 7 cut(s) 540, 799, 1234, 2001, 2064, 2111, 2203
BlsI GCNGC 7 cut(s) 541, 800, 1235, 2002, 2065, 2112, 2204
Bme1390I CCNGG 5 cut(s) 993, 1326, 1398, 1550, 2193
BmgBI CACGTC 1 cut(s) 496
BmgT120I GGNCC 2 cut(s) 262, 2200
BmiI GGNNCC 5 cut(s) 69, 118, 553, 905, 1167
BmrFI CCNGG 5 cut(s) 993, 1326, 1398, 1550, 2193
BmsI GCATC 3 cut(s) 978, 1018, 1837
BpiI GAAGAC 3 cut(s) 505, 944, 1445
BplI GAGNNNNNCTC 2 cut(s) 1056, 1088
BpmI CTGGAG 2 cut(s) 1083, 1656
Bpu14I TTCGAA 1 cut(s) 2177
BpuEI CTTGAG 3 cut(s) 848, 1259, 1891
Bsa29I ATCGAT 1 cut(s) 1119
BsaAI YACGTR 1 cut(s) 611
BsaBI GATNNNNATC 1 cut(s) 1974
BsaHI GRCGYC 3 cut(s) 552, 2102, 2118
BsaI GGTCTC 2 cut(s) 1277, 1588
BsaJI CCNNGG 4 cut(s) 258, 547, 1397, 1510
BsaWI WCCGGW 1 cut(s) 1811
BsaXI ACNNNNNCTCC 4 cut(s) 1704, 1734, 2077, 2107
Bsc4I CCNNNNNNNGG 5 cut(s) 668, 1753, 2192, 2198, 2220
Bse1I ACTGG 4 cut(s) 399, 773, 1433, 1639
Bse3DI GCAATG 1 cut(s) 2058
Bse8I GATNNNNATC 1 cut(s) 1974
BseBI CCWGG 5 cut(s) 993, 1326, 1398, 1550, 2193
BseCI ATCGAT 1 cut(s) 1119
BseDI CCNNGG 4 cut(s) 258, 547, 1397, 1510
BseGI GGATG 8 cut(s) 72, 416, 660, 687, 787, 815, 907, 1033
BseJI GATNNNNATC 1 cut(s) 1974
BseLI CCNNNNNNNGG 5 cut(s) 668, 1753, 2192, 2198, 2220
BseMI GCAATG 1 cut(s) 2058
BseMII CTCAG 6 cut(s) 455, 716, 882, 1087, 1281, 1396
BseNI ACTGG 4 cut(s) 399, 773, 1433, 1639
BseRI GAGGAG 7 cut(s) 161, 166, 337, 340, 343, 346, 1580
BseXI GCAGC 3 cut(s) 551, 810, 1245
BseYI CCCAGC 2 cut(s) 2010, 2141
BsgI GTGCAG 2 cut(s) 1665, 2150
Bsh1236I CGCG 1 cut(s) 2073
BshFI GGCC 7 cut(s) 263, 1071, 1311, 1329, 1405, 1528, 2202
BshNI GGYRCC 1 cut(s) 551
BshVI ATCGAT 1 cut(s) 1119
BsiHKAI GWGCWC 1 cut(s) 2049
BsiSI CCGG 1 cut(s) 1812
BslFI GGGAC 2 cut(s) 1108, 1195
BslI CCNNNNNNNGG 5 cut(s) 668, 1753, 2192, 2198, 2220
BsmAI GTCTC 6 cut(s) 8, 409, 1059, 1277, 1588, 1680
BsmBI CGTCTC 1 cut(s) 1059
BsmFI GGGAC 2 cut(s) 1108, 1195
BsmI GAATGC 2 cut(s) 542, 1002
BsnI GGCC 7 cut(s) 263, 1071, 1311, 1329, 1405, 1528, 2202
Bso31I GGTCTC 2 cut(s) 1277, 1588
Bsp119I TTCGAA 1 cut(s) 2177
Bsp1286I GDGCHC 2 cut(s) 72, 2049
Bsp1407I TGTACA 1 cut(s) 1803
Bsp143I GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
BspACI CCGC 6 cut(s) 181, 855, 2001, 2064, 2111, 2203
BspANI GGCC 7 cut(s) 263, 1071, 1311, 1329, 1405, 1528, 2202
BspCNI CTCAG 6 cut(s) 456, 715, 881, 1086, 1282, 1395
BspDI ATCGAT 1 cut(s) 1119
BspFNI CGCG 1 cut(s) 2073
BspLI GGNNCC 5 cut(s) 69, 118, 553, 905, 1167
BspMI ACCTGC 1 cut(s) 451
BspPI GGATC 3 cut(s) 29, 344, 1424
BspT104I TTCGAA 1 cut(s) 2177
BspT107I GGYRCC 1 cut(s) 551
BspTNI GGTCTC 2 cut(s) 1277, 1588
BsrDI GCAATG 1 cut(s) 2058
BsrGI TGTACA 1 cut(s) 1803
BsrI ACTGG 4 cut(s) 399, 773, 1433, 1639
BssECI CCNNGG 4 cut(s) 258, 547, 1397, 1510
BssMI GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
BssNI GRCGYC 3 cut(s) 552, 2102, 2118
BssSI CACGAG 1 cut(s) 663
BssT1I CCWWGG 3 cut(s) 258, 547, 1510
Bst2BI CACGAG 1 cut(s) 663
Bst2UI CCWGG 5 cut(s) 993, 1326, 1398, 1550, 2193
Bst4CI ACNGT 7 cut(s) 196, 247, 1188, 1378, 1741, 1829, 1987
Bst6I CTCTTC 5 cut(s) 51, 292, 1442, 1605, 1873
BstACI GRCGYC 3 cut(s) 552, 2102, 2118
BstAUI TGTACA 1 cut(s) 1803
BstBAI YACGTR 1 cut(s) 611
BstBI TTCGAA 1 cut(s) 2177
BstC8I GCNNGC 3 cut(s) 803, 1331, 1526
BstEII GGTNACC 1 cut(s) 848
BstF5I GGATG 8 cut(s) 72, 416, 660, 687, 787, 815, 907, 1033
BstFNI CGCG 1 cut(s) 2073
BstH2I RGCGCY 1 cut(s) 555
BstHHI GCGC 3 cut(s) 554, 2034, 2140
BstKTI GATC 7 cut(s) 24, 339, 919, 1296, 1432, 2134, 2164
BstMAI GTCTC 6 cut(s) 8, 409, 1059, 1277, 1588, 1680
BstMBI GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
BstMWI GCNNNNNNNGC 4 cut(s) 863, 997, 2110, 2202
BstNI CCWGG 5 cut(s) 993, 1326, 1398, 1550, 2193
BstNSI RCATGY 2 cut(s) 485, 1804
BstPI GGTNACC 1 cut(s) 848
BstSCI CCNGG 5 cut(s) 991, 1324, 1396, 1548, 2191
BstSFI CTRYAG 1 cut(s) 858
BstUI CGCG 1 cut(s) 2073
BstV1I GCAGC 3 cut(s) 551, 810, 1245
BstV2I GAAGAC 3 cut(s) 505, 944, 1445
BstX2I RGATCY 1 cut(s) 21
BstYI RGATCY 1 cut(s) 21
Bsu15I ATCGAT 1 cut(s) 1119
BsuRI GGCC 7 cut(s) 263, 1071, 1311, 1329, 1405, 1528, 2202
BsuTUI ATCGAT 1 cut(s) 1119
BtgZI GCGATG 3 cut(s) 1743, 2091, 2107
BtrI CACGTC 1 cut(s) 496
BtsCI GGATG 8 cut(s) 72, 416, 660, 687, 787, 815, 907, 1033
BtsIMutI CAGTG 2 cut(s) 478, 1849
BveI ACCTGC 1 cut(s) 451
Cac8I GCNNGC 3 cut(s) 803, 1331, 1526
CfoI GCGC 3 cut(s) 554, 2034, 2140
Cfr13I GGNCC 2 cut(s) 262, 2200
ClaI ATCGAT 1 cut(s) 1119
CseI GACGC 4 cut(s) 826, 2079, 2110, 2126
Csp6I GTAC 5 cut(s) 435, 675, 750, 1020, 1804
CspCI CAANNNNNGTGG 6 cut(s) 127, 162, 1249, 1284, 1795, 1830
CviAII CATG 8 cut(s) 18, 161, 232, 482, 587, 1334, 1801, 2135
CviQI GTAC 5 cut(s) 435, 675, 750, 1020, 1804
DinI GGCGCC 1 cut(s) 553
DpnI GATC 7 cut(s) 23, 338, 918, 1295, 1431, 2133, 2163
DpnII GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
DraI TTTAAA 1 cut(s) 643
EaeI YGGCCR 1 cut(s) 1327
Eam1104I CTCTTC 5 cut(s) 51, 292, 1442, 1605, 1873
EarI CTCTTC 5 cut(s) 51, 292, 1442, 1605, 1873
Ecl136II GAGCTC 1 cut(s) 2047
Eco130I CCWWGG 3 cut(s) 258, 547, 1510
Eco24I GRGCYC 2 cut(s) 72, 2049
Eco31I GGTCTC 2 cut(s) 1277, 1588
Eco32I GATATC 2 cut(s) 1394, 1597
Eco53kI GAGCTC 1 cut(s) 2047
Eco91I GGTNACC 1 cut(s) 848
EcoICRI GAGCTC 1 cut(s) 2047
EcoO109I RGGNCCY 1 cut(s) 262
EcoO65I GGTNACC 1 cut(s) 848
EcoRI GAATTC 2 cut(s) 1300, 1958
EcoRII CCWGG 5 cut(s) 991, 1324, 1396, 1548, 2191
EcoRV GATATC 2 cut(s) 1394, 1597
EcoT14I CCWWGG 3 cut(s) 258, 547, 1510
EcoT38I GRGCYC 2 cut(s) 72, 2049
EgeI GGCGCC 1 cut(s) 553
EheI GGCGCC 1 cut(s) 553
ErhI CCWWGG 3 cut(s) 258, 547, 1510
Esp3I CGTCTC 1 cut(s) 1059
FaeI CATG 8 cut(s) 21, 164, 235, 485, 590, 1337, 1804, 2138
FalI AAGNNNNNCTT 4 cut(s) 1289, 1321, 1513, 1545
FaqI GGGAC 2 cut(s) 1108, 1195
FatI CATG 8 cut(s) 17, 160, 231, 481, 586, 1333, 1800, 2134
FauI CCCGC 2 cut(s) 188, 862
Fnu4HI GCNGC 7 cut(s) 540, 799, 1234, 2001, 2064, 2111, 2203
FokI GGATG 8 cut(s) 59, 423, 667, 674, 794, 802, 894, 1040
FriOI GRGCYC 2 cut(s) 72, 2049
Fsp4HI GCNGC 7 cut(s) 540, 799, 1234, 2001, 2064, 2111, 2203
FspBI CTAG 7 cut(s) 296, 390, 716, 1389, 1560, 1854, 2233
GlaI GCGC 3 cut(s) 553, 2033, 2139
GluI GCNGC 7 cut(s) 540, 799, 1234, 2001, 2064, 2111, 2203
GsaI CCCAGC 2 cut(s) 2014, 2145
GsuI CTGGAG 2 cut(s) 1083, 1656
HaeII RGCGCY 1 cut(s) 555
HaeIII GGCC 7 cut(s) 263, 1071, 1311, 1329, 1405, 1528, 2202
HapII CCGG 1 cut(s) 1812
HgaI GACGC 4 cut(s) 826, 2079, 2110, 2126
HhaI GCGC 3 cut(s) 554, 2034, 2140
Hin1I GRCGYC 3 cut(s) 552, 2102, 2118
Hin1II CATG 8 cut(s) 21, 164, 235, 485, 590, 1337, 1804, 2138
Hin6I GCGC 3 cut(s) 552, 2032, 2138
HinP1I GCGC 3 cut(s) 552, 2032, 2138
HincII GTYRAC 3 cut(s) 489, 1048, 1825
HindII GTYRAC 3 cut(s) 489, 1048, 1825
HindIII AAGCTT 2 cut(s) 961, 1625
HinfI GANTC 7 cut(s) 455, 603, 872, 929, 1096, 1450, 2179
HpaI GTTAAC 1 cut(s) 1048
HpaII CCGG 1 cut(s) 1812
HphI GGTGA 6 cut(s) 53, 797, 860, 934, 1945, 1979
Hpy188III TCNNGA 9 cut(s) 25, 779, 1297, 1342, 1367, 1535, 1620, 2083, 2221
Hpy99I CGWCG 4 cut(s) 251, 842, 2073, 2104
HpyCH4III ACNGT 7 cut(s) 196, 247, 1188, 1378, 1741, 1829, 1987
HpyCH4IV ACGT 2 cut(s) 495, 610
HpyCH4V TGCA 5 cut(s) 805, 1482, 1646, 1781, 2167
HpyF10VI GCNNNNNNNGC 4 cut(s) 863, 997, 2110, 2202
HpySE526I ACGT 2 cut(s) 495, 610
Hsp92I GRCGYC 3 cut(s) 552, 2102, 2118
Hsp92II CATG 8 cut(s) 21, 164, 235, 485, 590, 1337, 1804, 2138
HspAI GCGC 3 cut(s) 552, 2032, 2138
KasI GGCGCC 1 cut(s) 551
KspAI GTTAAC 1 cut(s) 1048
Kzo9I GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
LmnI GCTCC 9 cut(s) 67, 717, 1165, 1514, 1567, 1817, 1898, 2052, 2223
Lsp1109I GCAGC 3 cut(s) 551, 810, 1245
LweI GCATC 3 cut(s) 978, 1018, 1837
MaeI CTAG 7 cut(s) 296, 390, 716, 1389, 1560, 1854, 2233
MaeII ACGT 2 cut(s) 495, 610
MaeIII GTNAC 7 cut(s) 683, 848, 1256, 1316, 1705, 1987, 2156
MalI GATC 7 cut(s) 23, 338, 918, 1295, 1431, 2133, 2163
MboI GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
MfeI CAATTG 3 cut(s) 218, 225, 1504
MflI RGATCY 1 cut(s) 21
MhlI GDGCHC 2 cut(s) 72, 2049
MlsI TGGCCA 1 cut(s) 1329
MluNI TGGCCA 1 cut(s) 1329
Mly113I GGCGCC 1 cut(s) 552
MlyI GAGTC 3 cut(s) 612, 1090, 1459
Mox20I TGGCCA 1 cut(s) 1329
MscI TGGCCA 1 cut(s) 1329
MseI TTAA 8 cut(s) 129, 384, 594, 626, 642, 1047, 1202, 1752
MslI CAYNNNNRTG 2 cut(s) 104, 692
Msp20I TGGCCA 1 cut(s) 1329
MspA1I CMGCKG 1 cut(s) 706
MspI CCGG 1 cut(s) 1812
MspR9I CCNGG 5 cut(s) 993, 1326, 1398, 1550, 2193
MunI CAATTG 3 cut(s) 218, 225, 1504
Mva1269I GAATGC 2 cut(s) 542, 1002
MvaI CCWGG 5 cut(s) 993, 1326, 1398, 1550, 2193
MvnI CGCG 1 cut(s) 2073
MwoI GCNNNNNNNGC 4 cut(s) 863, 997, 2110, 2202
NarI GGCGCC 1 cut(s) 552
NdeII GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
NlaIII CATG 8 cut(s) 21, 164, 235, 485, 590, 1337, 1804, 2138
NlaIV GGNNCC 5 cut(s) 69, 118, 553, 905, 1167
NmeAIII GCCGAG 1 cut(s) 258
NmuCI GTSAC 6 cut(s) 683, 848, 1256, 1316, 1705, 1987
NspI RCATGY 2 cut(s) 485, 1804
NspV TTCGAA 1 cut(s) 2177
PciI ACATGT 2 cut(s) 481, 1800
PcsI WCGNNNNNNNCGW 1 cut(s) 1937
PctI GAATGC 2 cut(s) 542, 1002
PfeI GAWTC 4 cut(s) 455, 872, 929, 2179
PflMI CCANNNNNTGG 1 cut(s) 2220
PkrI GCNGC 7 cut(s) 541, 800, 1235, 2002, 2065, 2112, 2204
PleI GAGTC 3 cut(s) 611, 1090, 1458
PluTI GGCGCC 1 cut(s) 555
PpsI GAGTC 3 cut(s) 611, 1090, 1458
Ppu21I YACGTR 1 cut(s) 611
PscI ACATGT 2 cut(s) 481, 1800
Psp124BI GAGCTC 1 cut(s) 2049
Psp6I CCWGG 5 cut(s) 991, 1324, 1396, 1548, 2191
PspEI GGTNACC 1 cut(s) 848
PspFI CCCAGC 2 cut(s) 2010, 2141
PspGI CCWGG 5 cut(s) 991, 1324, 1396, 1548, 2191
PspN4I GGNNCC 5 cut(s) 69, 118, 553, 905, 1167
PspPI GGNCC 2 cut(s) 262, 2200
PsuI RGATCY 1 cut(s) 21
PvuII CAGCTG 1 cut(s) 706
RsaI GTAC 5 cut(s) 436, 676, 751, 1021, 1805
RsaNI GTAC 5 cut(s) 435, 675, 750, 1020, 1804
RseI CAYNNNNRTG 2 cut(s) 104, 692
SacI GAGCTC 1 cut(s) 2049
SaqAI TTAA 8 cut(s) 129, 384, 594, 626, 642, 1047, 1202, 1752
SatI GCNGC 7 cut(s) 540, 799, 1234, 2001, 2064, 2111, 2203
Sau3AI GATC 7 cut(s) 21, 336, 916, 1293, 1429, 2131, 2161
Sau96I GGNCC 2 cut(s) 262, 2200
SchI GAGTC 3 cut(s) 612, 1090, 1459
ScrFI CCNGG 5 cut(s) 993, 1326, 1398, 1550, 2193
SduI GDGCHC 2 cut(s) 72, 2049
SfaNI GCATC 3 cut(s) 978, 1018, 1837
SfcI CTRYAG 1 cut(s) 858
SfoI GGCGCC 1 cut(s) 553
SfuI TTCGAA 1 cut(s) 2177
SmiMI CAYNNNNRTG 2 cut(s) 104, 692
SmlI CTYRAG 3 cut(s) 827, 1274, 1906
SmoI CTYRAG 3 cut(s) 827, 1274, 1906
SsiI CCGC 6 cut(s) 181, 855, 2001, 2064, 2111, 2203
SspDI GGCGCC 1 cut(s) 551
SspI AATATT 1 cut(s) 1771
SspMI CTAG 7 cut(s) 296, 390, 716, 1389, 1560, 1854, 2233
SstI GAGCTC 1 cut(s) 2049
StyD4I CCNGG 5 cut(s) 991, 1324, 1396, 1548, 2191
StyI CCWWGG 3 cut(s) 258, 547, 1510
TaaI ACNGT 7 cut(s) 196, 247, 1188, 1378, 1741, 1829, 1987
TaiI ACGT 2 cut(s) 498, 613
TaqI TCGA 9 cut(s) 26, 840, 915, 1119, 1341, 1599, 1940, 2043, 2177
TatI WGTACW 4 cut(s) 674, 749, 1019, 1803
TauI GCSGC 4 cut(s) 2003, 2066, 2113, 2205
TfiI GAWTC 4 cut(s) 455, 872, 929, 2179
Tru1I TTAA 8 cut(s) 129, 384, 594, 626, 642, 1047, 1202, 1752
Tru9I TTAA 8 cut(s) 129, 384, 594, 626, 642, 1047, 1202, 1752
TscAI CASTG 2 cut(s) 478, 1849
TseFI GTSAC 6 cut(s) 683, 848, 1256, 1316, 1705, 1987
TseI GCWGC 3 cut(s) 539, 798, 1233
Tsp45I GTSAC 6 cut(s) 683, 848, 1256, 1316, 1705, 1987
TspDTI ATGAA 4 cut(s) 176, 279, 837, 950
TspGWI ACGGA 1 cut(s) 1500
TspRI CASTG 2 cut(s) 478, 1849
Van91I CCANNNNNTGG 1 cut(s) 2220
XapI RAATTY 5 cut(s) 788, 1300, 1468, 1716, 1958
XceI RCATGY 2 cut(s) 485, 1804
XspI CTAG 7 cut(s) 296, 390, 716, 1389, 1560, 1854, 2233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.