RLG00000004409

Galactinol--sucrose galactosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000881
Physical Location & Seq
Forward (+)
59117466 .. 59121199
3734 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004409

Sequence Viewer

Length: 2274 bp
ATGACCTCTACCGAGCCAAGCAGCAGAGATGGTTGCTTCATGGTCCGTGGCAGTACCCTTCTGACACGTGTCCCGGCCAACATCACCGTCACTCCGGCCACTGGTGAATCAGCTTTCATCGGAGCCACCTCTGAAAACCGTAGCTCTCGCCGTGTCTTCTCCCTCGGACTTCTTGAGGGATACAAATTTATGTGTCTGTTCAGATTCAAAATCTGGTGGATGATACCGAGTTTTGGGGATTCTGGATGTGATGTTCCGGCAGAGACTCAAATGGTTCTCTTGGAAGCAACGCAAAAGTCGAGTAGTAGTAGTATTCCCGACGAAAATGGGTTCTCATCTGAGTCTGAGAAGCCAACGAGTGCTGAGAACAAAAGCACTTTCTACATTCTGCTATTGCCAGTCTTGGATGGAGCATTCAGGGCTACTTTGCAAGGCACCACTGTTAATGAGCTTGAGTTTTGCGTTGAAAGCGGGGACTGTGAAGTTCAAACCTCACGAGTAACTGAAGCAGTATTCGTGAATTCAGGAGATGACCCGTATAAGCTCATTAGGGACTCTATTAAGATTCTTGCCAAGCACAAAGGTACATTCAATCATTTAGAAGACAAGATGATACCAGCACATGTAGACTGGTTTGGATGGAACACATGGGATGCATTTTATAATGACGTTGATCCGGAAGGAATCGTGCTTGGACTCAAAAGTCTTTCCGAAGGAGGATGCCCCCCGAAATGTTTGTACATCGATGAAGGATGGCAGACTAAAGTAATTGAAAATGAAACTGAACTACCAAATACAGCGAAGTTTGTGGCCAGGTTGGCAAGCTTAGAAGAAAATGATAGGTTCAAGGGCTACCCCTCGGGAAAGTCATCATTTCCTAATCTCTGCGAGTTTGTGAAAACCATCAAAGAGGAACATGGACTGAAGTTAGTATATGCATGGCACGCTATACTTGGTTCATGGGGAGGGCTACTTCCAACATCTGAAGCACTGAGGAAATACAATCCCCAAATCAAATCCATAGTTCAGTCTCCTGGTAACAAGAGTAACGTCATATGTGGAACCCTTGATCCAATGGAGAAACATGGGATAGGAATGATTGACCCTTCGATGATTTATAGATTTTACAATGATCTACATAGCTACCTTGCAAGTTGCAATATAGACGGAGTGAAGGTGGATATTCACAATGAAGTGGAACTCCTTGCTTCTGGTAATGGAGGCCGCGTTGCATTGATGAGGCATTTCCAAGAAGCCCTTGAGGAATCTGTCATGAGAAACTTTGGCAACAATAACCTTATTTGTTCCATGAGTCTAAGCAATGACTACATTTACAGCTCAAAGAAGAGTGCAGCTTCAAGAGTGTCAGAGGACTTCATGCCATTGGAGAAAACATTTCAGACCCTACATGTTGCTGCAGTAGCTTTTAACAGTCTTCTTATGGGAGAGATTGTTGTACCAGATTGGGACATGTTCTTTAGCGACCACTACACCCGGGAGTTCCATGCTGCAGCCAGAGCATTGGGTGGATGTCCAGTATATGTAAGTGACAAGCCTGGCAGCCATAATTTCAATGTCCTAAAAAAGCTTGTACTGCCTGATGGCTCTATTCTAAGAGCTAGATTCGCTGGCCGGCCTACTAGGGACTGCTTATTCAGAGACCCTGTGGTCGATGGAAAAAGTCTGCTGAAGATTTGGAATCTAAACAAGGTATCAGGAGTTATTGGTGTTTTCAACTGCCAAAGAGCCGGAAAGTGGCCACCAATTGTAGGTGCTCAATATGTGCCTCCCTCCGAATCTGCACCGCCTCTTATAGGCCTTGTCAGCCCCATAGATATTAATATGCTTGAAGATGTTGCAAATGAAAGTTGGAGAGGAGAATGTGCAGTATATGCATACCATGCAGGTACTCTCTCTGTAATGCCAAAGAAAGACCACTTTGAAGTATCCTTGGATGTGCTAGAATGTGAAGTTTTCACCATATCTCCTATTATGGTTTTTGGTGACAACCTTCAATTTGCCCCAGTAGGGTTGCTTGATATGTACAATTCAGGAGGAGCACTTGAATCTCTAGATGTCAGCAACCTGTTCGACTGTGCTGTGAAGGTTCGAGTCAGAGGATGTGGTCGATTTGGAGCCTACACAAACAAAAAACCAAAGTCTTGTCTGGTGGACAAGAAGGAGGAGTTTATAGTCTACAATGCTAATAATGGTCTGTTGGTACTTAAACTTCAAGGCGATTGCAAAGTAAAAGAGATTGAGTTCATGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

758

Amino Acids

83.82

Weight (kDa)

5.54

Isoelectric Point (pI)

39.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 10 - 743 2.3e-239 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 663
AasI GACNNNNNNGTC 2 cut(s) 702, 1667
Acc36I ACCTGC 1 cut(s) 1895
AccB1I GGYRCC 1 cut(s) 434
AccI GTMKAC 2 cut(s) 627, 2196
AccII CGCG 1 cut(s) 1227
AccIII TCCGGA 1 cut(s) 676
AciI CCGC 3 cut(s) 471, 1225, 1805
AclWI GGATC 2 cut(s) 668, 1064
AcoI YGGCCR 5 cut(s) 75, 96, 810, 1630, 1757
AcsI RAATTY 2 cut(s) 185, 520
AcuI CTGAAG 4 cut(s) 525, 944, 1005, 1709
AcvI CACGTG 1 cut(s) 68
AfaI GTAC 9 cut(s) 55, 586, 740, 1458, 1593, 1909, 2045, 2223, 2270
AfiI CCNNNNNNNGG 6 cut(s) 101, 233, 1755, 1769, 1814, 2028
AflIII ACRYGT 5 cut(s) 65, 67, 622, 1408, 1470
AjnI CCWGG 3 cut(s) 812, 1033, 1555
AloI GAACNNNNNNTCC 4 cut(s) 237, 269, 1054, 1086
Alw21I GWGCWC 2 cut(s) 1777, 2062
Alw26I GTCTC 3 cut(s) 257, 1035, 1653
AlwI GGATC 2 cut(s) 668, 1064
Ama87I CYCGRG 2 cut(s) 859, 1494
Aor13HI TCCGGA 1 cut(s) 676
AoxI GGCC 8 cut(s) 75, 96, 810, 1222, 1630, 1634, 1757, 1816
ApeKI GCWGC 6 cut(s) 21, 1352, 1415, 1508, 1511, 1560
ApoI RAATTY 2 cut(s) 185, 520
AseI ATTAAT 1 cut(s) 1839
AspS9I GGNCC 1 cut(s) 43
AsuC2I CCSGG 3 cut(s) 74, 1495, 1496
AsuHPI GGTGA 4 cut(s) 76, 116, 1969, 2015
AvaI CYCGRG 2 cut(s) 859, 1494
AvaII GGWCC 1 cut(s) 43
BalI TGGCCA 2 cut(s) 812, 1759
BanI GGYRCC 1 cut(s) 434
BarI GAAGNNNNNNTAC 2 cut(s) 2214, 2246
BauI CACGAG 1 cut(s) 495
BbrPI CACGTG 1 cut(s) 68
BbsI GAAGAC 3 cut(s) 148, 609, 1427
Bbv12I GWGCWC 2 cut(s) 1777, 2062
BbvI GCAGC 6 cut(s) 33, 1364, 1402, 1495, 1523, 1572
BccI CCATC 7 cut(s) 23, 401, 633, 747, 911, 1595, 1667
BceAI ACGGC 1 cut(s) 135
BcgI CGANNNNNNTGC 2 cut(s) 2071, 2105
BciT130I CCWGG 3 cut(s) 814, 1035, 1557
BciVI GTATCC 2 cut(s) 173, 1957
BcnI CCSGG 3 cut(s) 74, 1495, 1496
BcoDI GTCTC 3 cut(s) 257, 1035, 1653
BfaI CTAG 4 cut(s) 1620, 1641, 1961, 2072
BfmI CTRYAG 2 cut(s) 1416, 1509
BfuAI ACCTGC 1 cut(s) 1895
BfuI GTATCC 2 cut(s) 173, 1957
BglI GCCNNNNNGGC 1 cut(s) 818
BisI GCNGC 7 cut(s) 22, 1225, 1353, 1416, 1509, 1512, 1561
BlsI GCNGC 7 cut(s) 23, 1226, 1354, 1417, 1510, 1513, 1562
Bme1390I CCNGG 6 cut(s) 74, 814, 1035, 1495, 1496, 1557
Bme18I GGWCC 1 cut(s) 43
BmeT110I CYCGRG 2 cut(s) 859, 1494
BmgT120I GGNCC 1 cut(s) 43
BmiI GGNNCC 4 cut(s) 124, 436, 1063, 2137
BmrFI CCNGG 6 cut(s) 74, 814, 1035, 1495, 1496, 1557
BmrI ACTGGG 1 cut(s) 2018
BmsI GCATC 2 cut(s) 643, 710
BmuI ACTGGG 1 cut(s) 2018
BoxI GACNNNNGTC 1 cut(s) 68
BpiI GAAGAC 3 cut(s) 148, 609, 1427
BpuEI CTTGAG 3 cut(s) 194, 473, 1280
BpuMI CCSGG 3 cut(s) 74, 1495, 1496
Bsa29I ATCGAT 1 cut(s) 744
BsaAI YACGTR 1 cut(s) 68
BsaI GGTCTC 1 cut(s) 1653
BsaJI CCNNGG 5 cut(s) 46, 163, 858, 1494, 1950
BsaWI WCCGGW 1 cut(s) 676
Bsc4I CCNNNNNNNGG 6 cut(s) 101, 233, 1755, 1769, 1814, 2028
Bse118I RCCGGY 1 cut(s) 1632
Bse1I ACTGG 5 cut(s) 106, 398, 635, 1535, 2024
Bse3DI GCAATG 1 cut(s) 1327
BseAI TCCGGA 1 cut(s) 676
BseBI CCWGG 3 cut(s) 814, 1035, 1557
BseCI ATCGAT 1 cut(s) 744
BseDI CCNNGG 5 cut(s) 46, 163, 858, 1494, 1950
BseLI CCNNNNNNNGG 6 cut(s) 101, 233, 1755, 1769, 1814, 2028
BseMI GCAATG 1 cut(s) 1327
BseMII CTCAG 4 cut(s) 330, 336, 354, 983
BseNI ACTGG 5 cut(s) 106, 398, 635, 1535, 2024
BseRI GAGGAG 3 cut(s) 1890, 2070, 2198
BseXI GCAGC 6 cut(s) 33, 1364, 1402, 1495, 1523, 1572
BsgI GTGCAG 3 cut(s) 1371, 1785, 1905
Bsh1236I CGCG 1 cut(s) 1227
BshFI GGCC 8 cut(s) 77, 98, 812, 1224, 1632, 1636, 1759, 1818
BshNI GGYRCC 1 cut(s) 434
BshVI ATCGAT 1 cut(s) 744
BsiHKAI GWGCWC 2 cut(s) 1777, 2062
BsiHKCI CYCGRG 2 cut(s) 859, 1494
BsiSI CCGG 7 cut(s) 74, 95, 257, 677, 1495, 1633, 1749
BslFI GGGAC 5 cut(s) 56, 488, 566, 1481, 1658
BslI CCNNNNNNNGG 6 cut(s) 101, 233, 1755, 1769, 1814, 2028
BsmAI GTCTC 3 cut(s) 257, 1035, 1653
BsmFI GGGAC 5 cut(s) 56, 488, 566, 1481, 1658
BsmI GAATGC 1 cut(s) 413
BsnI GGCC 8 cut(s) 77, 98, 812, 1224, 1632, 1636, 1759, 1818
Bso31I GGTCTC 1 cut(s) 1653
BsoBI CYCGRG 2 cut(s) 859, 1494
Bsp1286I GDGCHC 2 cut(s) 1777, 2062
Bsp13I TCCGGA 1 cut(s) 676
Bsp1407I TGTACA 2 cut(s) 738, 2043
Bsp143I GATC 3 cut(s) 673, 1069, 1132
BspACI CCGC 3 cut(s) 471, 1225, 1805
BspANI GGCC 8 cut(s) 77, 98, 812, 1224, 1632, 1636, 1759, 1818
BspCNI CTCAG 4 cut(s) 331, 337, 355, 984
BspDI ATCGAT 1 cut(s) 744
BspEI TCCGGA 1 cut(s) 676
BspFNI CGCG 1 cut(s) 1227
BspHI TCATGA 1 cut(s) 1272
BspLI GGNNCC 4 cut(s) 124, 436, 1063, 2137
BspMAI CTGCAG 2 cut(s) 1420, 1513
BspMI ACCTGC 1 cut(s) 1895
BspPI GGATC 2 cut(s) 668, 1064
BspT107I GGYRCC 1 cut(s) 434
BspTNI GGTCTC 1 cut(s) 1653
BsrDI GCAATG 1 cut(s) 1327
BsrFI RCCGGY 1 cut(s) 1632
BsrGI TGTACA 2 cut(s) 738, 2043
BsrI ACTGG 5 cut(s) 106, 398, 635, 1535, 2024
BssAI RCCGGY 1 cut(s) 1632
BssECI CCNNGG 5 cut(s) 46, 163, 858, 1494, 1950
BssMI GATC 3 cut(s) 673, 1069, 1132
BssSI CACGAG 1 cut(s) 495
BssT1I CCWWGG 1 cut(s) 1950
Bst2BI CACGAG 1 cut(s) 495
Bst2UI CCWGG 3 cut(s) 814, 1035, 1557
Bst4CI ACNGT 6 cut(s) 88, 140, 442, 479, 1433, 2096
Bst6I CTCTTC 1 cut(s) 1340
BstAPI GCANNNNNTGC 2 cut(s) 1892, 1901
BstAUI TGTACA 2 cut(s) 738, 2043
BstBAI YACGTR 1 cut(s) 68
BstC8I GCNNGC 4 cut(s) 823, 945, 1630, 1634
BstDEI CTNAG 7 cut(s) 339, 345, 363, 826, 992, 1316, 1613
BstDSI CCRYGG 1 cut(s) 46
BstENI CCTNNNNNAGG 1 cut(s) 1812
BstFNI CGCG 1 cut(s) 1227
BstKTI GATC 3 cut(s) 676, 1072, 1135
BstMAI GTCTC 3 cut(s) 257, 1035, 1653
BstMBI GATC 3 cut(s) 673, 1069, 1132
BstNI CCWGG 3 cut(s) 814, 1035, 1557
BstNSI RCATGY 3 cut(s) 626, 1412, 1474
BstPAI GACNNNNGTC 1 cut(s) 68
BstSCI CCNGG 6 cut(s) 72, 812, 1033, 1493, 1494, 1555
BstSFI CTRYAG 2 cut(s) 1416, 1509
BstUI CGCG 1 cut(s) 1227
BstV1I GCAGC 6 cut(s) 33, 1364, 1402, 1495, 1523, 1572
BstV2I GAAGAC 3 cut(s) 148, 609, 1427
BstXI CCANNNNNNTGG 1 cut(s) 1522
Bsu15I ATCGAT 1 cut(s) 744
BsuI GTATCC 2 cut(s) 173, 1957
BsuRI GGCC 8 cut(s) 77, 98, 812, 1224, 1632, 1636, 1759, 1818
BsuTUI ATCGAT 1 cut(s) 744
BtgI CCRYGG 1 cut(s) 46
BtsIMutI CAGTG 3 cut(s) 99, 438, 989
BveI ACCTGC 1 cut(s) 1895
Cac8I GCNNGC 4 cut(s) 823, 945, 1630, 1634
CciI TCATGA 1 cut(s) 1272
Cfr10I RCCGGY 1 cut(s) 1632
Cfr13I GGNCC 1 cut(s) 43
Cfr9I CCCGGG 1 cut(s) 1494
ClaI ATCGAT 1 cut(s) 744
Csp6I GTAC 9 cut(s) 54, 585, 739, 1457, 1592, 1908, 2044, 2222, 2269
CviQI GTAC 9 cut(s) 54, 585, 739, 1457, 1592, 1908, 2044, 2222, 2269
DdeI CTNAG 7 cut(s) 339, 345, 363, 826, 992, 1316, 1613
DpnI GATC 3 cut(s) 675, 1071, 1134
DpnII GATC 3 cut(s) 673, 1069, 1132
DrdI GACNNNNNNGTC 2 cut(s) 702, 1667
DseDI GACNNNNNNGTC 2 cut(s) 702, 1667
EaeI YGGCCR 5 cut(s) 75, 96, 810, 1630, 1757
Eam1104I CTCTTC 1 cut(s) 1340
EarI CTCTTC 1 cut(s) 1340
Eco130I CCWWGG 1 cut(s) 1950
Eco147I AGGCCT 1 cut(s) 1818
Eco31I GGTCTC 1 cut(s) 1653
Eco47I GGWCC 1 cut(s) 43
Eco57I CTGAAG 4 cut(s) 525, 944, 1005, 1709
Eco72I CACGTG 1 cut(s) 68
Eco88I CYCGRG 2 cut(s) 859, 1494
EcoNI CCTNNNNNAGG 1 cut(s) 1812
EcoRI GAATTC 1 cut(s) 520
EcoRII CCWGG 3 cut(s) 812, 1033, 1555
EcoT14I CCWWGG 1 cut(s) 1950
EcoT22I ATGCAT 3 cut(s) 658, 940, 1897
ErhI CCWWGG 1 cut(s) 1950
FalI AAGNNNNNCTT 2 cut(s) 1242, 1274
FaqI GGGAC 5 cut(s) 56, 488, 566, 1481, 1658
FauI CCCGC 1 cut(s) 464
FauNDI CATATG 1 cut(s) 1055
FblI GTMKAC 2 cut(s) 627, 2196
Fnu4HI GCNGC 7 cut(s) 22, 1225, 1353, 1416, 1509, 1512, 1561
FseI GGCCGGCC 1 cut(s) 1636
Fsp4HI GCNGC 7 cut(s) 22, 1225, 1353, 1416, 1509, 1512, 1561
FspBI CTAG 4 cut(s) 1620, 1641, 1961, 2072
GluI GCNGC 7 cut(s) 22, 1225, 1353, 1416, 1509, 1512, 1561
HaeIII GGCC 8 cut(s) 77, 98, 812, 1224, 1632, 1636, 1759, 1818
HapII CCGG 7 cut(s) 74, 95, 257, 677, 1495, 1633, 1749
HindIII AAGCTT 2 cut(s) 823, 1586
HpaII CCGG 7 cut(s) 74, 95, 257, 677, 1495, 1633, 1749
HphI GGTGA 4 cut(s) 76, 116, 1969, 2015
Hpy166II GTNNAC 3 cut(s) 628, 2173, 2197
Hpy8I GTNNAC 3 cut(s) 628, 2173, 2197
Hpy99I CGWCG 1 cut(s) 323
HpyAV CCTTC 9 cut(s) 68, 674, 707, 743, 1116, 1168, 2021, 2098, 2173
HpyCH4III ACNGT 6 cut(s) 88, 140, 442, 479, 1433, 2096
HpyCH4IV ACGT 3 cut(s) 67, 669, 1050
HpyF3I CTNAG 7 cut(s) 339, 345, 363, 826, 992, 1316, 1613
HpySE526I ACGT 3 cut(s) 67, 669, 1050
Kpn2I TCCGGA 1 cut(s) 676
KroI GCCGGC 1 cut(s) 1632
KroNI GCCGGC 1 cut(s) 1634
Kzo9I GATC 3 cut(s) 673, 1069, 1132
LmnI GCTCC 4 cut(s) 122, 410, 2057, 2135
Lsp1109I GCAGC 6 cut(s) 33, 1364, 1402, 1495, 1523, 1572
LweI GCATC 2 cut(s) 643, 710
MaeI CTAG 4 cut(s) 1620, 1641, 1961, 2072
MaeII ACGT 3 cut(s) 67, 669, 1050
MaeIII GTNAC 6 cut(s) 88, 499, 1037, 1046, 1547, 2003
MalI GATC 3 cut(s) 675, 1071, 1134
MboI GATC 3 cut(s) 673, 1069, 1132
MboII GAAGA 7 cut(s) 148, 614, 842, 1357, 1427, 1702, 1862
MfeI CAATTG 1 cut(s) 1764
MhlI GDGCHC 2 cut(s) 1777, 2062
MlsI TGGCCA 2 cut(s) 812, 1759
MluCI AATT 7 cut(s) 185, 520, 768, 1567, 1764, 2015, 2047
MluNI TGGCCA 2 cut(s) 812, 1759
MlyI GAGTC 6 cut(s) 259, 350, 548, 690, 1321, 2121
MmeI TCCRAC 2 cut(s) 1001, 1850
Mox20I TGGCCA 2 cut(s) 812, 1759
Mph1103I ATGCAT 3 cut(s) 658, 940, 1897
MroI TCCGGA 1 cut(s) 676
MroNI GCCGGC 1 cut(s) 1632
MscI TGGCCA 2 cut(s) 812, 1759
MseI TTAA 5 cut(s) 444, 561, 1428, 1839, 2226
Msp20I TGGCCA 2 cut(s) 812, 1759
MspI CCGG 7 cut(s) 74, 95, 257, 677, 1495, 1633, 1749
MspR9I CCNGG 6 cut(s) 74, 814, 1035, 1495, 1496, 1557
MunI CAATTG 1 cut(s) 1764
Mva1269I GAATGC 1 cut(s) 413
MvaI CCWGG 3 cut(s) 814, 1035, 1557
MvnI CGCG 1 cut(s) 1227
NaeI GCCGGC 1 cut(s) 1634
NciI CCSGG 3 cut(s) 74, 1495, 1496
NdeI CATATG 1 cut(s) 1055
NdeII GATC 3 cut(s) 673, 1069, 1132
NgoMIV GCCGGC 1 cut(s) 1632
NlaIV GGNNCC 4 cut(s) 124, 436, 1063, 2137
NmuCI GTSAC 3 cut(s) 88, 1547, 2003
NsiI ATGCAT 3 cut(s) 658, 940, 1897
NspI RCATGY 3 cut(s) 626, 1412, 1474
PagI TCATGA 1 cut(s) 1272
PceI AGGCCT 1 cut(s) 1818
PciI ACATGT 3 cut(s) 622, 1408, 1470
PcsI WCGNNNNNNNCGW 1 cut(s) 296
PctI GAATGC 1 cut(s) 413
PdiI GCCGGC 1 cut(s) 1634
PkrI GCNGC 7 cut(s) 23, 1226, 1354, 1417, 1510, 1513, 1562
PleI GAGTC 6 cut(s) 259, 349, 548, 690, 1320, 2120
PmaCI CACGTG 1 cut(s) 68
PmlI CACGTG 1 cut(s) 68
PpsI GAGTC 6 cut(s) 259, 349, 548, 690, 1320, 2120
Ppu21I YACGTR 1 cut(s) 68
PscI ACATGT 3 cut(s) 622, 1408, 1470
PshAI GACNNNNGTC 1 cut(s) 68
PshBI ATTAAT 1 cut(s) 1839
PsiI TTATAA 1 cut(s) 663
Psp6I CCWGG 3 cut(s) 812, 1033, 1555
PspCI CACGTG 1 cut(s) 68
PspGI CCWGG 3 cut(s) 812, 1033, 1555
PspN4I GGNNCC 4 cut(s) 124, 436, 1063, 2137
PspPI GGNCC 1 cut(s) 43
PstI CTGCAG 2 cut(s) 1420, 1513
RigI GGCCGGCC 1 cut(s) 1636
RsaI GTAC 9 cut(s) 55, 586, 740, 1458, 1593, 1909, 2045, 2223, 2270
RsaNI GTAC 9 cut(s) 54, 585, 739, 1457, 1592, 1908, 2044, 2222, 2269
SaqAI TTAA 5 cut(s) 444, 561, 1428, 1839, 2226
SatI GCNGC 7 cut(s) 22, 1225, 1353, 1416, 1509, 1512, 1561
Sau3AI GATC 3 cut(s) 673, 1069, 1132
Sau96I GGNCC 1 cut(s) 43
SchI GAGTC 6 cut(s) 259, 350, 548, 690, 1321, 2121
ScrFI CCNGG 6 cut(s) 74, 814, 1035, 1495, 1496, 1557
SduI GDGCHC 2 cut(s) 1777, 2062
SfaNI GCATC 2 cut(s) 643, 710
SfcI CTRYAG 2 cut(s) 1416, 1509
SinI GGWCC 1 cut(s) 43
SmaI CCCGGG 1 cut(s) 1496
SmlI CTYRAG 3 cut(s) 173, 452, 1259
SmoI CTYRAG 3 cut(s) 173, 452, 1259
Sse9I AATT 7 cut(s) 185, 520, 768, 1567, 1764, 2015, 2047
SseBI AGGCCT 1 cut(s) 1818
SsiI CCGC 3 cut(s) 471, 1225, 1805
SspMI CTAG 4 cut(s) 1620, 1641, 1961, 2072
StuI AGGCCT 1 cut(s) 1818
StyD4I CCNGG 6 cut(s) 72, 812, 1033, 1493, 1494, 1555
StyI CCWWGG 1 cut(s) 1950
TaaI ACNGT 6 cut(s) 88, 140, 442, 479, 1433, 2096
TaiI ACGT 3 cut(s) 70, 672, 1053
TaqI TCGA 7 cut(s) 299, 744, 1109, 1671, 2091, 2110, 2128
TasI AATT 7 cut(s) 185, 520, 768, 1567, 1764, 2015, 2047
TatI WGTACW 4 cut(s) 738, 1591, 2043, 2268
TauI GCSGC 1 cut(s) 1227
Tru1I TTAA 5 cut(s) 444, 561, 1428, 1839, 2226
Tru9I TTAA 5 cut(s) 444, 561, 1428, 1839, 2226
TscAI CASTG 3 cut(s) 106, 445, 996
TseFI GTSAC 3 cut(s) 88, 1547, 2003
TseI GCWGC 6 cut(s) 21, 1352, 1415, 1508, 1511, 1560
Tsp45I GTSAC 3 cut(s) 88, 1547, 2003
TspDTI ATGAA 9 cut(s) 28, 106, 762, 792, 948, 1206, 1366, 1878, 2254
TspGWI ACGGA 2 cut(s) 35, 1182
TspMI CCCGGG 1 cut(s) 1494
TspRI CASTG 3 cut(s) 106, 445, 996
VpaK11BI GGWCC 1 cut(s) 43
VspI ATTAAT 1 cut(s) 1839
XagI CCTNNNNNAGG 1 cut(s) 1812
XapI RAATTY 2 cut(s) 185, 520
XbaI TCTAGA 1 cut(s) 2071
XceI RCATGY 3 cut(s) 626, 1412, 1474
XmaI CCCGGG 1 cut(s) 1494
XmiI GTMKAC 2 cut(s) 627, 2196
XspI CTAG 4 cut(s) 1620, 1641, 1961, 2072
Zsp2I ATGCAT 3 cut(s) 658, 940, 1897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.