Raffinose synthase or seed imbibition protein Sip1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Raffinose_syn | PF05691 | 110 - 830 | 1.4e-264 | Raffinose synthase or seed imbibition protein Sip1 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 328, 1469 |
| AccB1I | GGYRCC | 1 cut(s) | 428 |
| AccI | GTMKAC | 1 cut(s) | 2234 |
| AccII | CGCG | 1 cut(s) | 489 |
| AciI | CCGC | 2 cut(s) | 32, 1800 |
| AclI | AACGTT | 1 cut(s) | 2517 |
| AclWI | GGATC | 5 cut(s) | 215, 1336, 1364, 1879, 1922 |
| AcoI | YGGCCR | 1 cut(s) | 2024 |
| AcsI | RAATTY | 5 cut(s) | 665, 1306, 1349, 1966, 2456 |
| AcuI | CTGAAG | 2 cut(s) | 74, 951 |
| AfaI | GTAC | 8 cut(s) | 271, 313, 553, 898, 973, 1293, 1860, 2303 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 545, 1732, 1756, 2251 |
| AflIII | ACRYGT | 1 cut(s) | 2298 |
| AhlI | ACTAGT | 1 cut(s) | 266 |
| AjiI | CACGTC | 1 cut(s) | 373 |
| AjnI | CCWGG | 5 cut(s) | 868, 1252, 1300, 1894, 2046 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 374, 406 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1224, 1256, 2028, 2060 |
| Alw21I | GWGCWC | 2 cut(s) | 98, 243 |
| Alw26I | GTCTC | 7 cut(s) | 286, 953, 1154, 1460, 1501, 2086, 2178 |
| Alw44I | GTGCAC | 1 cut(s) | 239 |
| AlwI | GGATC | 5 cut(s) | 215, 1336, 1364, 1879, 1922 |
| Ama87I | CYCGRG | 2 cut(s) | 1626, 1823 |
| AoxI | GGCC | 5 cut(s) | 123, 1186, 1579, 1901, 2024 |
| ApaLI | GTGCAC | 1 cut(s) | 239 |
| ApoI | RAATTY | 5 cut(s) | 665, 1306, 1349, 1966, 2456 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2177, 2180, 2209, 2212 |
| AspS9I | GGNCC | 3 cut(s) | 124, 1579, 2130 |
| AsuC2I | CCSGG | 2 cut(s) | 1824, 1825 |
| AsuHPI | GGTGA | 8 cut(s) | 674, 737, 811, 1145, 1290, 1724, 2443, 2477 |
| AvaI | CYCGRG | 2 cut(s) | 1626, 1823 |
| AvaII | GGWCC | 1 cut(s) | 2130 |
| AxyI | CCTNAGG | 1 cut(s) | 1190 |
| BaeGI | GKGCMC | 1 cut(s) | 243 |
| BalI | TGGCCA | 1 cut(s) | 2026 |
| BanI | GGYRCC | 1 cut(s) | 428 |
| BauI | CACGAG | 1 cut(s) | 540 |
| BbsI | GAAGAC | 3 cut(s) | 382, 821, 1943 |
| Bbv12I | GWGCWC | 2 cut(s) | 98, 243 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 847, 881 |
| BciT130I | CCWGG | 5 cut(s) | 870, 1254, 1302, 1896, 2048 |
| BciVI | GTATCC | 1 cut(s) | 2251 |
| BcnI | CCSGG | 2 cut(s) | 1824, 1825 |
| BcoDI | GTCTC | 7 cut(s) | 286, 953, 1154, 1460, 1501, 2086, 2178 |
| BcuI | ACTAGT | 1 cut(s) | 266 |
| BfmI | CTRYAG | 4 cut(s) | 735, 1683, 1744, 2088 |
| BfuAI | ACCTGC | 2 cut(s) | 328, 1469 |
| BfuI | GTATCC | 1 cut(s) | 2251 |
| BmcAI | AGTACT | 1 cut(s) | 271 |
| Bme1390I | CCNGG | 7 cut(s) | 870, 1254, 1302, 1824, 1825, 1896, 2048 |
| Bme18I | GGWCC | 1 cut(s) | 2130 |
| BmeT110I | CYCGRG | 2 cut(s) | 1626, 1823 |
| BmgBI | CACGTC | 1 cut(s) | 373 |
| BmgT120I | GGNCC | 3 cut(s) | 124, 1579, 2130 |
| BmiI | GGNNCC | 3 cut(s) | 430, 782, 1044 |
| BmrFI | CCNGG | 7 cut(s) | 870, 1254, 1302, 1824, 1825, 1896, 2048 |
| BmrI | ACTGGG | 1 cut(s) | 1283 |
| BmsI | GCATC | 5 cut(s) | 638, 701, 855, 895, 1640 |
| BmuI | ACTGGG | 1 cut(s) | 1283 |
| BpiI | GAAGAC | 3 cut(s) | 382, 821, 1943 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 933, 965 |
| BpmI | CTGGAG | 3 cut(s) | 1236, 1484, 2335 |
| BpuEI | CTTGAG | 2 cut(s) | 1547, 2389 |
| BpuMI | CCSGG | 2 cut(s) | 1824, 1825 |
| BsaBI | GATNNNNATC | 2 cut(s) | 212, 2472 |
| BsaI | GGTCTC | 4 cut(s) | 953, 1154, 1460, 2086 |
| BsaJI | CCNNGG | 8 cut(s) | 120, 424, 1119, 1708, 1823, 1894, 1895, 2008 |
| BsaWI | WCCGGW | 1 cut(s) | 2132 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 545, 1732, 1756, 2251 |
| Bse118I | RCCGGY | 1 cut(s) | 1749 |
| Bse1I | ACTGG | 5 cut(s) | 650, 1289, 1467, 1931, 2352 |
| Bse21I | CCTNAGG | 1 cut(s) | 1190 |
| Bse8I | GATNNNNATC | 2 cut(s) | 212, 2472 |
| BseBI | CCWGG | 5 cut(s) | 870, 1254, 1302, 1896, 2048 |
| BseDI | CCNNGG | 8 cut(s) | 120, 424, 1119, 1708, 1823, 1894, 1895, 2008 |
| BseGI | GGATG | 8 cut(s) | 293, 537, 564, 692, 784, 910, 1330, 2043 |
| BseJI | GATNNNNATC | 2 cut(s) | 212, 2472 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 545, 1732, 1756, 2251 |
| BseMII | CTCAG | 8 cut(s) | 332, 593, 759, 964, 1158, 1266, 1755, 1894 |
| BseNI | ACTGG | 5 cut(s) | 650, 1289, 1467, 1931, 2352 |
| BseRI | GAGGAG | 6 cut(s) | 12, 17, 105, 214, 217, 623 |
| BseSI | GKGCMC | 1 cut(s) | 243 |
| BseYI | CCCAGC | 1 cut(s) | 730 |
| BsgI | GTGCAG | 1 cut(s) | 2163 |
| Bsh1236I | CGCG | 1 cut(s) | 489 |
| BshFI | GGCC | 5 cut(s) | 125, 1188, 1581, 1903, 2026 |
| BshNI | GGYRCC | 1 cut(s) | 428 |
| BsiHKAI | GWGCWC | 2 cut(s) | 98, 243 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1626, 1823 |
| BsiSI | CCGG | 4 cut(s) | 196, 1750, 1824, 2133 |
| BslFI | GGGAC | 2 cut(s) | 1072, 1709 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 545, 1732, 1756, 2251 |
| BsmAI | GTCTC | 7 cut(s) | 286, 953, 1154, 1460, 1501, 2086, 2178 |
| BsmFI | GGGAC | 2 cut(s) | 1072, 1709 |
| BsmI | GAATGC | 2 cut(s) | 419, 879 |
| BsnI | GGCC | 5 cut(s) | 125, 1188, 1581, 1903, 2026 |
| Bso31I | GGTCTC | 4 cut(s) | 953, 1154, 1460, 2086 |
| BsoBI | CYCGRG | 2 cut(s) | 1626, 1823 |
| Bsp1286I | GDGCHC | 2 cut(s) | 98, 243 |
| Bsp1407I | TGTACA | 1 cut(s) | 2301 |
| Bsp143I | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| BspACI | CCGC | 2 cut(s) | 32, 1800 |
| BspANI | GGCC | 5 cut(s) | 125, 1188, 1581, 1903, 2026 |
| BspCNI | CTCAG | 8 cut(s) | 333, 592, 758, 963, 1159, 1267, 1756, 1893 |
| BspFNI | CGCG | 1 cut(s) | 489 |
| BspLI | GGNNCC | 3 cut(s) | 430, 782, 1044 |
| BspMAI | CTGCAG | 2 cut(s) | 1687, 2092 |
| BspMI | ACCTGC | 2 cut(s) | 328, 1469 |
| BspPI | GGATC | 5 cut(s) | 215, 1336, 1364, 1879, 1922 |
| BspT107I | GGYRCC | 1 cut(s) | 428 |
| BspTNI | GGTCTC | 4 cut(s) | 953, 1154, 1460, 2086 |
| BsrFI | RCCGGY | 1 cut(s) | 1749 |
| BsrGI | TGTACA | 1 cut(s) | 2301 |
| BsrI | ACTGG | 5 cut(s) | 650, 1289, 1467, 1931, 2352 |
| BssAI | RCCGGY | 1 cut(s) | 1749 |
| BssECI | CCNNGG | 8 cut(s) | 120, 424, 1119, 1708, 1823, 1894, 1895, 2008 |
| BssMI | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| BssNAI | GTATAC | 1 cut(s) | 2235 |
| BssSI | CACGAG | 1 cut(s) | 540 |
| BssT1I | CCWWGG | 5 cut(s) | 120, 424, 1119, 1708, 2008 |
| Bst1107I | GTATAC | 1 cut(s) | 2235 |
| Bst2BI | CACGAG | 1 cut(s) | 540 |
| Bst2UI | CCWGG | 5 cut(s) | 870, 1254, 1302, 1896, 2048 |
| Bst6I | CTCTTC | 3 cut(s) | 154, 2103, 2371 |
| BstAUI | TGTACA | 1 cut(s) | 2301 |
| BstC8I | GCNNGC | 3 cut(s) | 680, 1212, 1751 |
| BstEII | GGTNACC | 1 cut(s) | 725 |
| BstF5I | GGATG | 8 cut(s) | 293, 537, 564, 692, 784, 910, 1330, 2043 |
| BstFNI | CGCG | 1 cut(s) | 489 |
| BstKTI | GATC | 8 cut(s) | 210, 796, 1173, 1331, 1372, 1402, 1874, 1930 |
| BstMAI | GTCTC | 7 cut(s) | 286, 953, 1154, 1460, 1501, 2086, 2178 |
| BstMBI | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 186, 192, 740, 874, 1578, 1688, 1784 |
| BstNI | CCWGG | 5 cut(s) | 870, 1254, 1302, 1896, 2048 |
| BstNSI | RCATGY | 2 cut(s) | 1214, 2302 |
| BstPI | GGTNACC | 1 cut(s) | 725 |
| BstSCI | CCNGG | 7 cut(s) | 868, 1252, 1300, 1822, 1823, 1894, 2046 |
| BstSFI | CTRYAG | 4 cut(s) | 735, 1683, 1744, 2088 |
| BstSLI | GKGCMC | 1 cut(s) | 243 |
| BstUI | CGCG | 1 cut(s) | 489 |
| BstV2I | GAAGAC | 3 cut(s) | 382, 821, 1943 |
| BstX2I | RGATCY | 3 cut(s) | 207, 1328, 1369 |
| BstYI | RGATCY | 3 cut(s) | 207, 1328, 1369 |
| BstZ17I | GTATAC | 1 cut(s) | 2235 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1190 |
| BsuI | GTATCC | 1 cut(s) | 2251 |
| BsuRI | GGCC | 5 cut(s) | 125, 1188, 1581, 1903, 2026 |
| BtgZI | GCGATG | 1 cut(s) | 504 |
| BtrI | CACGTC | 1 cut(s) | 373 |
| BtsCI | GGATG | 8 cut(s) | 293, 537, 564, 692, 784, 910, 1330, 2043 |
| BtsI | GCAGTG | 1 cut(s) | 1692 |
| BtsIMutI | CAGTG | 3 cut(s) | 96, 355, 1692 |
| BveI | ACCTGC | 2 cut(s) | 328, 1469 |
| Cac8I | GCNNGC | 3 cut(s) | 680, 1212, 1751 |
| Cfr10I | RCCGGY | 1 cut(s) | 1749 |
| Cfr13I | GGNCC | 3 cut(s) | 124, 1579, 2130 |
| Cfr9I | CCCGGG | 1 cut(s) | 1823 |
| CseI | GACGC | 1 cut(s) | 703 |
| Csp6I | GTAC | 8 cut(s) | 270, 312, 552, 897, 972, 1292, 1859, 2302 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1126, 1161, 2293, 2328 |
| CviQI | GTAC | 8 cut(s) | 270, 312, 552, 897, 972, 1292, 1859, 2302 |
| DpnI | GATC | 8 cut(s) | 209, 795, 1172, 1330, 1371, 1401, 1873, 1929 |
| DpnII | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| DraI | TTTAAA | 1 cut(s) | 520 |
| EaeI | YGGCCR | 1 cut(s) | 2024 |
| Eam1104I | CTCTTC | 3 cut(s) | 154, 2103, 2371 |
| EarI | CTCTTC | 3 cut(s) | 154, 2103, 2371 |
| Eco130I | CCWWGG | 5 cut(s) | 120, 424, 1119, 1708, 2008 |
| Eco31I | GGTCTC | 4 cut(s) | 953, 1154, 1460, 2086 |
| Eco32I | GATATC | 2 cut(s) | 1412, 2095 |
| Eco47I | GGWCC | 1 cut(s) | 2130 |
| Eco57I | CTGAAG | 2 cut(s) | 74, 951 |
| Eco81I | CCTNAGG | 1 cut(s) | 1190 |
| Eco88I | CYCGRG | 2 cut(s) | 1626, 1823 |
| Eco91I | GGTNACC | 1 cut(s) | 725 |
| EcoO109I | RGGNCCY | 1 cut(s) | 124 |
| EcoO65I | GGTNACC | 1 cut(s) | 725 |
| EcoRI | GAATTC | 1 cut(s) | 2456 |
| EcoRII | CCWGG | 5 cut(s) | 868, 1252, 1300, 1894, 2046 |
| EcoRV | GATATC | 2 cut(s) | 1412, 2095 |
| EcoT14I | CCWWGG | 5 cut(s) | 120, 424, 1119, 1708, 2008 |
| ErhI | CCWWGG | 5 cut(s) | 120, 424, 1119, 1708, 2008 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1166, 1198 |
| FaqI | GGGAC | 2 cut(s) | 1072, 1709 |
| FauI | CCCGC | 1 cut(s) | 39 |
| FblI | GTMKAC | 1 cut(s) | 2234 |
| FokI | GGATG | 8 cut(s) | 300, 544, 551, 679, 771, 917, 1337, 2030 |
| GsaI | CCCAGC | 1 cut(s) | 734 |
| GsuI | CTGGAG | 3 cut(s) | 1236, 1484, 2335 |
| HaeIII | GGCC | 5 cut(s) | 125, 1188, 1581, 1903, 2026 |
| HapII | CCGG | 4 cut(s) | 196, 1750, 1824, 2133 |
| HgaI | GACGC | 1 cut(s) | 703 |
| HincII | GTYRAC | 2 cut(s) | 366, 2323 |
| HindII | GTYRAC | 2 cut(s) | 366, 2323 |
| HindIII | AAGCTT | 3 cut(s) | 473, 838, 2123 |
| HpaII | CCGG | 4 cut(s) | 196, 1750, 1824, 2133 |
| HphI | GGTGA | 8 cut(s) | 674, 737, 811, 1145, 1290, 1724, 2443, 2477 |
| Hpy188III | TCNNGA | 7 cut(s) | 53, 656, 917, 929, 1174, 2033, 2118 |
| Hpy99I | CGWCG | 2 cut(s) | 719, 1001 |
| HpyAV | CCTTC | 8 cut(s) | 26, 137, 926, 959, 1031, 1049, 2071, 2164 |
| HpyCH4IV | ACGT | 2 cut(s) | 372, 2517 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 186, 192, 740, 874, 1578, 1688, 1784 |
| HpySE526I | ACGT | 2 cut(s) | 372, 2517 |
| KroI | GCCGGC | 1 cut(s) | 1749 |
| KroNI | GCCGGC | 1 cut(s) | 1751 |
| Kzo9I | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| LmnI | GCTCC | 5 cut(s) | 1042, 1255, 2012, 2315, 2396 |
| LweI | GCATC | 5 cut(s) | 638, 701, 855, 895, 1640 |
| MaeII | ACGT | 2 cut(s) | 372, 2517 |
| MaeIII | GTNAC | 9 cut(s) | 60, 560, 725, 1133, 1296, 1814, 2050, 2203, 2485 |
| MalI | GATC | 8 cut(s) | 209, 795, 1172, 1330, 1371, 1401, 1873, 1929 |
| MboI | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| MfeI | CAATTG | 1 cut(s) | 2002 |
| MflI | RGATCY | 3 cut(s) | 207, 1328, 1369 |
| MhlI | GDGCHC | 2 cut(s) | 98, 243 |
| MlsI | TGGCCA | 1 cut(s) | 2026 |
| MluNI | TGGCCA | 1 cut(s) | 2026 |
| MlyI | GAGTC | 6 cut(s) | 489, 1503, 1586, 1812, 1957, 2342 |
| MmeI | TCCRAC | 1 cut(s) | 1540 |
| Mox20I | TGGCCA | 1 cut(s) | 2026 |
| MroNI | GCCGGC | 1 cut(s) | 1749 |
| MscI | TGGCCA | 1 cut(s) | 2026 |
| MseI | TTAA | 9 cut(s) | 258, 471, 503, 519, 924, 1079, 1280, 1848, 2250 |
| MslI | CAYNNNNRTG | 1 cut(s) | 569 |
| Msp20I | TGGCCA | 1 cut(s) | 2026 |
| MspA1I | CMGCKG | 2 cut(s) | 734, 1763 |
| MspI | CCGG | 4 cut(s) | 196, 1750, 1824, 2133 |
| MspR9I | CCNGG | 7 cut(s) | 870, 1254, 1302, 1824, 1825, 1896, 2048 |
| MunI | CAATTG | 1 cut(s) | 2002 |
| Mva1269I | GAATGC | 2 cut(s) | 419, 879 |
| MvaI | CCWGG | 5 cut(s) | 870, 1254, 1302, 1896, 2048 |
| MvnI | CGCG | 1 cut(s) | 489 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 186, 192, 740, 874, 1578, 1688, 1784 |
| NaeI | GCCGGC | 1 cut(s) | 1751 |
| NciI | CCSGG | 2 cut(s) | 1824, 1825 |
| NdeII | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| NgoMIV | GCCGGC | 1 cut(s) | 1749 |
| NlaIV | GGNNCC | 3 cut(s) | 430, 782, 1044 |
| NmeAIII | GCCGAG | 1 cut(s) | 120 |
| NmuCI | GTSAC | 6 cut(s) | 560, 725, 1133, 1296, 1814, 2203 |
| NspI | RCATGY | 2 cut(s) | 1214, 2302 |
| PaeI | GCATGC | 1 cut(s) | 1214 |
| PaeR7I | CTCGAG | 1 cut(s) | 1626 |
| PasI | CCCWGGG | 1 cut(s) | 1895 |
| PciI | ACATGT | 1 cut(s) | 2298 |
| PctI | GAATGC | 2 cut(s) | 419, 879 |
| PdiI | GCCGGC | 1 cut(s) | 1751 |
| PfeI | GAWTC | 4 cut(s) | 332, 749, 806, 1512 |
| PfoI | TCCNGGA | 1 cut(s) | 1252 |
| PleI | GAGTC | 6 cut(s) | 488, 1502, 1586, 1811, 1956, 2342 |
| PpsI | GAGTC | 6 cut(s) | 488, 1502, 1586, 1811, 1956, 2342 |
| PscI | ACATGT | 1 cut(s) | 2298 |
| Psp1406I | AACGTT | 1 cut(s) | 2517 |
| Psp6I | CCWGG | 5 cut(s) | 868, 1252, 1300, 1894, 2046 |
| PspEI | GGTNACC | 1 cut(s) | 725 |
| PspFI | CCCAGC | 1 cut(s) | 730 |
| PspGI | CCWGG | 5 cut(s) | 868, 1252, 1300, 1894, 2046 |
| PspN4I | GGNNCC | 3 cut(s) | 430, 782, 1044 |
| PspPI | GGNCC | 3 cut(s) | 124, 1579, 2130 |
| PspXI | VCTCGAGB | 1 cut(s) | 1626 |
| PstI | CTGCAG | 2 cut(s) | 1687, 2092 |
| PsuI | RGATCY | 3 cut(s) | 207, 1328, 1369 |
| PvuII | CAGCTG | 2 cut(s) | 734, 1763 |
| RsaI | GTAC | 8 cut(s) | 271, 313, 553, 898, 973, 1293, 1860, 2303 |
| RsaNI | GTAC | 8 cut(s) | 270, 312, 552, 897, 972, 1292, 1859, 2302 |
| RseI | CAYNNNNRTG | 1 cut(s) | 569 |
| SaqAI | TTAA | 9 cut(s) | 258, 471, 503, 519, 924, 1079, 1280, 1848, 2250 |
| Sau3AI | GATC | 8 cut(s) | 207, 793, 1170, 1328, 1369, 1399, 1871, 1927 |
| Sau96I | GGNCC | 3 cut(s) | 124, 1579, 2130 |
| ScaI | AGTACT | 1 cut(s) | 271 |
| SchI | GAGTC | 6 cut(s) | 489, 1503, 1586, 1812, 1957, 2342 |
| ScrFI | CCNGG | 7 cut(s) | 870, 1254, 1302, 1824, 1825, 1896, 2048 |
| SduI | GDGCHC | 2 cut(s) | 98, 243 |
| SfaNI | GCATC | 5 cut(s) | 638, 701, 855, 895, 1640 |
| SfcI | CTRYAG | 4 cut(s) | 735, 1683, 1744, 2088 |
| Sfr274I | CTCGAG | 1 cut(s) | 1626 |
| SinI | GGWCC | 1 cut(s) | 2130 |
| SlaI | CTCGAG | 1 cut(s) | 1626 |
| SmaI | CCCGGG | 1 cut(s) | 1825 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 569 |
| SmlI | CTYRAG | 3 cut(s) | 1526, 1626, 2404 |
| SmoI | CTYRAG | 3 cut(s) | 1526, 1626, 2404 |
| SpeI | ACTAGT | 1 cut(s) | 266 |
| SphI | GCATGC | 1 cut(s) | 1214 |
| SsiI | CCGC | 2 cut(s) | 32, 1800 |
| SspI | AATATT | 1 cut(s) | 2269 |
| StyD4I | CCNGG | 7 cut(s) | 868, 1252, 1300, 1822, 1823, 1894, 2046 |
| StyI | CCWWGG | 5 cut(s) | 120, 424, 1119, 1708, 2008 |
| TaiI | ACGT | 2 cut(s) | 375, 2520 |
| TaqI | TCGA | 5 cut(s) | 717, 792, 996, 1627, 2097 |
| TatI | WGTACW | 6 cut(s) | 269, 551, 896, 1291, 1858, 2301 |
| TfiI | GAWTC | 4 cut(s) | 332, 749, 806, 1512 |
| Tru1I | TTAA | 9 cut(s) | 258, 471, 503, 519, 924, 1079, 1280, 1848, 2250 |
| Tru9I | TTAA | 9 cut(s) | 258, 471, 503, 519, 924, 1079, 1280, 1848, 2250 |
| TscAI | CASTG | 3 cut(s) | 103, 355, 1692 |
| TseFI | GTSAC | 6 cut(s) | 560, 725, 1133, 1296, 1814, 2203 |
| Tsp45I | GTSAC | 6 cut(s) | 560, 725, 1133, 1296, 1814, 2203 |
| TspDTI | ATGAA | 4 cut(s) | 27, 141, 714, 827 |
| TspGWI | ACGGA | 1 cut(s) | 1998 |
| TspMI | CCCGGG | 1 cut(s) | 1823 |
| TspRI | CASTG | 3 cut(s) | 103, 355, 1692 |
| VneI | GTGCAC | 1 cut(s) | 239 |
| VpaK11BI | GGWCC | 1 cut(s) | 2130 |
| XapI | RAATTY | 5 cut(s) | 665, 1306, 1349, 1966, 2456 |
| XbaI | TCTAGA | 1 cut(s) | 655 |
| XceI | RCATGY | 2 cut(s) | 1214, 2302 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2425 |
| XhoI | CTCGAG | 1 cut(s) | 1626 |
| XmaI | CCCGGG | 1 cut(s) | 1823 |
| XmiI | GTMKAC | 1 cut(s) | 2234 |
| ZrmI | AGTACT | 1 cut(s) | 271 |