Rroxscaffold_3G00263360

Galactinol--sucrose galactosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000881
Physical Location & Seq
Forward (+)
57319401 .. 57323240
3840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263360.1

Sequence Viewer

Length: 2178 bp
ATGACTATGACCTCTACCGAGCCAATCATCAGAGATGGTTGCTTCATGGTCCGTGACAATGCCCTTCTGACACATGTCCCGGCCAACATCACCGTCACTCCGGCCACTGATGAATCAGCTTTCATCGGAGCCACCTCTGAAAACCCTAGCTCTCGCCATGTCTTCTCCCTCGGACTTCTTGAGGGATACAAGTTTATGTGCCTGTTCAGATTCAAAATCTGGTGGATGATACCGAGTTTTGGGGATTCTGGATGTGATGTTCCGGCAGAGACTCAAATGCTTCTCTTGGAAGCAACGCAAAAGTCGAGTAGTAGTAGTATTCCCGACGAAAATGGGTTCTCATCCGAGTCTGAGGAGCCAACAGGTGCTGAGAACAAAAGCACTTTCTACATTCTGCTATTGCCAGTCTTGGATGGAGCATTCAGGGCTACTTTGCAAGGCAACACTGTTAATGAGCTTGAGTTTTGCGTTGAAAGCGGGGACCGTGAAGTTCAAACCTCACGAGTAACTGAAGCAGTATTTGTGAATTCAGGAGATGACCCATATAAGCTCATTAGGGACTCTATCAAGATTCTTGCCAAGCACAAAGGTACATTCAATCATTTAGAAGACAAGAAGATACCAGCACATGTAGACTGGTTTGGATGGAACACATGGGATGCATTTTATAATGACGTTGATCCGGAAGGAATCGTGCTTGGACTCAAAAGTCTTTCCGAAGGAGGGTGCCCTCCGAAATGTTTGTACATCGATGAAGGATGGCAGACTAAAGTAATTGAAAATGAAACTGAACTACCACATACAGCGAAATTTGTGGCCAGGTTGGCAAGCTTAGAAGAAAATGATAGGTTCAAGGGATACCCCTCGGGAAAGTCATCATTTCCTAATCTCCGCGAGTTTGTGAAAGCCATCAAAGAGGAACATGGACTGAAGGTAGTATATGCATGGCACGCATTACTTGGTTCATGGGGAGGGCTACTTCCAACATCTGAAGCACTGAGGAAATACAATCCCCAAATCAAATCCATAGTTCAGTCTCCCGGTAACAAGAGTTGCAATATAGACGGAGTGAAGGTGGATATACACAATGAAGTGGAACTCCTTGCATCTGGTTATGGAGGCCGCGTTGCATTGATGAGTCATTTCCAAGAAGCCCTCGAGGAATCTGTCATGAGAAACTTTGGCAGCAATAACCTTATTTGTTCCATGAGTCTAAGCAATGACTACATTTACAGCTCAAAGAAGAGTGCAGCTTCAAGAGTGTCAGAGGACTTCATGCCACTAGAGAAAACATTTCAGACCCTACATGTTGCTGCAGTAGCTTTTAACAGTCTTCTTATGGGAGAGATTGTTGTACCAGATTGGGACATGTTCTTTAGCGACCACTACACCCGGGAGTTCCATGCTGCAGCCAGAGCATTGGGTGGATGTCCAGTATATGTAAGTGACAAGCCTGGCAGCCATAATTTCAATGTCCTCAAAAAGCTTGTACTGCCTGATGGCTCTATTCTAAGAGCTAGATTCGCTGGCCGGCCTACTAGGGACTGCTTATTCAGTGACCCTGTGGTCGATGGAAAAAGTCTGCTGAAGATTTGGAATCTAAACAAGGTATCAGGAGTTATTGGTGTTTTCAATTGCCAAAGAGCCGGAAAGTGGCCACCAATTGTAGGTGCTCAATATGTGCCTCCCTCTGAATCTGCACCACCTCTTATAGGCCTTGTCAGCCCCATAGATATCAATATGCTTGAAGATGTTGCAAATGAAAGTTGGAGAGGAGAATGTGCAGTATATGCATACCATTCAGGTACTCTCTCTGTAATGCCAAAGAAAGACCACTTTGAAGTATCCTTGGATGTGCTAGAATGTGAAGTTTTCACCATATCTCCTATTATGGTTTTTGGTGACAACCTTCAATTTGCCCCAGTAGGGTTGCTTGATATGTACAATTCAGGAGGAGCACTTGAATCTCTAGATGTCAGCAACAATGATCTGTTCGACTGTGTTGTGAAGGTTCGAGTCAGAGGATGTGGTCGATTTGGAGCCTACTCAAACAAAAAACCAAAGTCTTGTCTGGTGAACAAGAAAGAGGAGTTTATAGTCTACAATGCTAATAATGGTTTGTTGGTACTTAAACTTCAAGGCGATTGCAAAGTAAAAGAGATTGAGTTCATGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

725

Amino Acids

80.26

Weight (kDa)

5.37

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 10 - 350 1.8e-97 Raffinose synthase or seed imbibition protein Sip1
Raffinose_syn PF05691 351 - 711 1.1e-124 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 669
AasI GACNNNNNNGTC 2 cut(s) 708, 1565
AbsI CCTCGAGG 1 cut(s) 1157
AccB1I GGYRCC 1 cut(s) 726
AccI GTMKAC 2 cut(s) 633, 2100
AccII CGCG 2 cut(s) 894, 1125
AccIII TCCGGA 1 cut(s) 682
AciI CCGC 3 cut(s) 477, 892, 1123
AclWI GGATC 1 cut(s) 674
AcoI YGGCCR 5 cut(s) 81, 102, 816, 1528, 1655
AcsI RAATTY 2 cut(s) 526, 809
AcuI CTGAAG 4 cut(s) 531, 950, 1011, 1607
AfaI GTAC 8 cut(s) 592, 746, 1356, 1491, 1807, 1943, 2127, 2174
AfiI CCNNNNNNNGG 6 cut(s) 239, 723, 1653, 1667, 1712, 1926
AflIII ACRYGT 4 cut(s) 73, 628, 1306, 1368
AjnI CCWGG 2 cut(s) 818, 1453
AloI GAACNNNNNNTCC 2 cut(s) 243, 275
Alw21I GWGCWC 2 cut(s) 1675, 1960
Alw26I GTCTC 2 cut(s) 263, 1041
AlwI GGATC 1 cut(s) 674
AlwNI CAGNNNCTG 1 cut(s) 368
Ama87I CYCGRG 3 cut(s) 865, 1157, 1392
Aor13HI TCCGGA 1 cut(s) 682
AoxI GGCC 8 cut(s) 81, 102, 816, 1120, 1528, 1532, 1655, 1714
ApeKI GCWGC 6 cut(s) 1185, 1250, 1313, 1406, 1409, 1458
ApoI RAATTY 2 cut(s) 526, 809
AspS9I GGNCC 2 cut(s) 49, 481
AsuC2I CCSGG 4 cut(s) 80, 1041, 1393, 1394
AsuHPI GGTGA 4 cut(s) 82, 1867, 1913, 2086
AvaI CYCGRG 3 cut(s) 865, 1157, 1392
AvaII GGWCC 2 cut(s) 49, 481
BaeGI GKGCMC 1 cut(s) 731
BalI TGGCCA 2 cut(s) 818, 1657
BanI GGYRCC 1 cut(s) 726
BarI GAAGNNNNNNTAC 2 cut(s) 2118, 2150
BauI CACGAG 1 cut(s) 501
BbsI GAAGAC 3 cut(s) 154, 615, 1325
Bbv12I GWGCWC 2 cut(s) 1675, 1960
BbvI GCAGC 6 cut(s) 1197, 1262, 1300, 1393, 1421, 1470
BccI CCATC 7 cut(s) 29, 407, 639, 753, 917, 1493, 1565
BciT130I CCWGG 2 cut(s) 820, 1455
BciVI GTATCC 3 cut(s) 179, 851, 1855
BcnI CCSGG 4 cut(s) 80, 1041, 1393, 1394
BcoDI GTCTC 2 cut(s) 263, 1041
BfaI CTAG 6 cut(s) 147, 1283, 1518, 1539, 1859, 1970
BfmI CTRYAG 2 cut(s) 1314, 1407
BfuI GTATCC 3 cut(s) 179, 851, 1855
BglI GCCNNNNNGGC 1 cut(s) 824
BisI GCNGC 7 cut(s) 1123, 1186, 1251, 1314, 1407, 1410, 1459
BlsI GCNGC 7 cut(s) 1124, 1187, 1252, 1315, 1408, 1411, 1460
Bme1390I CCNGG 6 cut(s) 80, 820, 1041, 1393, 1394, 1455
Bme18I GGWCC 2 cut(s) 49, 481
BmeT110I CYCGRG 3 cut(s) 865, 1157, 1392
BmgT120I GGNCC 2 cut(s) 49, 481
BmiI GGNNCC 5 cut(s) 130, 357, 482, 728, 2041
BmrFI CCNGG 6 cut(s) 80, 820, 1041, 1393, 1394, 1455
BmrI ACTGGG 1 cut(s) 1916
BmsI GCATC 2 cut(s) 649, 1115
BmuI ACTGGG 1 cut(s) 1916
BoxI GACNNNNGTC 1 cut(s) 74
BpiI GAAGAC 3 cut(s) 154, 615, 1325
BpuEI CTTGAG 2 cut(s) 200, 479
BpuMI CCSGG 4 cut(s) 80, 1041, 1393, 1394
Bsa29I ATCGAT 1 cut(s) 750
BsaJI CCNNGG 4 cut(s) 169, 864, 1392, 1848
BsaWI WCCGGW 1 cut(s) 682
Bsc4I CCNNNNNNNGG 6 cut(s) 239, 723, 1653, 1667, 1712, 1926
Bse118I RCCGGY 1 cut(s) 1530
Bse1I ACTGG 4 cut(s) 404, 641, 1433, 1922
Bse3DI GCAATG 1 cut(s) 1225
BseAI TCCGGA 1 cut(s) 682
BseBI CCWGG 2 cut(s) 820, 1455
BseCI ATCGAT 1 cut(s) 750
BseDI CCNNGG 4 cut(s) 169, 864, 1392, 1848
BseLI CCNNNNNNNGG 6 cut(s) 239, 723, 1653, 1667, 1712, 1926
BseMI GCAATG 1 cut(s) 1225
BseMII CTCAG 3 cut(s) 342, 360, 989
BseNI ACTGG 4 cut(s) 404, 641, 1433, 1922
BseRI GAGGAG 4 cut(s) 368, 1788, 1968, 2102
BseSI GKGCMC 1 cut(s) 731
BseXI GCAGC 6 cut(s) 1197, 1262, 1300, 1393, 1421, 1470
BsgI GTGCAG 3 cut(s) 1269, 1683, 1803
Bsh1236I CGCG 2 cut(s) 894, 1125
BshFI GGCC 8 cut(s) 83, 104, 818, 1122, 1530, 1534, 1657, 1716
BshNI GGYRCC 1 cut(s) 726
BshVI ATCGAT 1 cut(s) 750
BsiHKAI GWGCWC 2 cut(s) 1675, 1960
BsiHKCI CYCGRG 3 cut(s) 865, 1157, 1392
BsiSI CCGG 8 cut(s) 80, 101, 263, 683, 1041, 1393, 1531, 1647
BslFI GGGAC 5 cut(s) 62, 494, 572, 1379, 1556
BslI CCNNNNNNNGG 6 cut(s) 239, 723, 1653, 1667, 1712, 1926
BsmAI GTCTC 2 cut(s) 263, 1041
BsmFI GGGAC 5 cut(s) 62, 494, 572, 1379, 1556
BsmI GAATGC 1 cut(s) 419
BsnI GGCC 8 cut(s) 83, 104, 818, 1122, 1530, 1534, 1657, 1716
BsoBI CYCGRG 3 cut(s) 865, 1157, 1392
Bsp1286I GDGCHC 3 cut(s) 731, 1675, 1960
Bsp13I TCCGGA 1 cut(s) 682
Bsp1407I TGTACA 2 cut(s) 744, 1941
Bsp143I GATC 2 cut(s) 679, 1987
BspACI CCGC 3 cut(s) 477, 892, 1123
BspANI GGCC 8 cut(s) 83, 104, 818, 1122, 1530, 1534, 1657, 1716
BspCNI CTCAG 3 cut(s) 343, 361, 990
BspDI ATCGAT 1 cut(s) 750
BspEI TCCGGA 1 cut(s) 682
BspFNI CGCG 2 cut(s) 894, 1125
BspHI TCATGA 1 cut(s) 1170
BspLI GGNNCC 5 cut(s) 130, 357, 482, 728, 2041
BspMAI CTGCAG 2 cut(s) 1318, 1411
BspPI GGATC 1 cut(s) 674
BspT107I GGYRCC 1 cut(s) 726
BsrDI GCAATG 1 cut(s) 1225
BsrFI RCCGGY 1 cut(s) 1530
BsrGI TGTACA 2 cut(s) 744, 1941
BsrI ACTGG 4 cut(s) 404, 641, 1433, 1922
BssAI RCCGGY 1 cut(s) 1530
BssECI CCNNGG 4 cut(s) 169, 864, 1392, 1848
BssMI GATC 2 cut(s) 679, 1987
BssSI CACGAG 1 cut(s) 501
BssT1I CCWWGG 1 cut(s) 1848
Bst2BI CACGAG 1 cut(s) 501
Bst2UI CCWGG 2 cut(s) 820, 1455
Bst4CI ACNGT 5 cut(s) 94, 448, 485, 1331, 2000
Bst6I CTCTTC 1 cut(s) 1238
BstAPI GCANNNNNTGC 1 cut(s) 1790
BstAUI TGTACA 2 cut(s) 744, 1941
BstC8I GCNNGC 4 cut(s) 829, 951, 1528, 1532
BstDEI CTNAG 6 cut(s) 351, 369, 832, 998, 1214, 1511
BstENI CCTNNNNNAGG 1 cut(s) 1710
BstFNI CGCG 2 cut(s) 894, 1125
BstKTI GATC 2 cut(s) 682, 1990
BstMAI GTCTC 2 cut(s) 263, 1041
BstMBI GATC 2 cut(s) 679, 1987
BstNI CCWGG 2 cut(s) 820, 1455
BstNSI RCATGY 4 cut(s) 77, 632, 1310, 1372
BstPAI GACNNNNGTC 1 cut(s) 74
BstSCI CCNGG 6 cut(s) 78, 818, 1039, 1391, 1392, 1453
BstSFI CTRYAG 2 cut(s) 1314, 1407
BstSLI GKGCMC 1 cut(s) 731
BstUI CGCG 2 cut(s) 894, 1125
BstV1I GCAGC 6 cut(s) 1197, 1262, 1300, 1393, 1421, 1470
BstV2I GAAGAC 3 cut(s) 154, 615, 1325
BstXI CCANNNNNNTGG 1 cut(s) 1420
Bsu15I ATCGAT 1 cut(s) 750
BsuI GTATCC 3 cut(s) 179, 851, 1855
BsuRI GGCC 8 cut(s) 83, 104, 818, 1122, 1530, 1534, 1657, 1716
BsuTUI ATCGAT 1 cut(s) 750
BtsIMutI CAGTG 4 cut(s) 105, 444, 995, 1561
Cac8I GCNNGC 4 cut(s) 829, 951, 1528, 1532
CaiI CAGNNNCTG 1 cut(s) 368
CciI TCATGA 1 cut(s) 1170
Cfr10I RCCGGY 1 cut(s) 1530
Cfr13I GGNCC 2 cut(s) 49, 481
Cfr9I CCCGGG 1 cut(s) 1392
ClaI ATCGAT 1 cut(s) 750
Csp6I GTAC 8 cut(s) 591, 745, 1355, 1490, 1806, 1942, 2126, 2173
CviQI GTAC 8 cut(s) 591, 745, 1355, 1490, 1806, 1942, 2126, 2173
DdeI CTNAG 6 cut(s) 351, 369, 832, 998, 1214, 1511
DpnI GATC 2 cut(s) 681, 1989
DpnII GATC 2 cut(s) 679, 1987
DrdI GACNNNNNNGTC 2 cut(s) 708, 1565
DseDI GACNNNNNNGTC 2 cut(s) 708, 1565
EaeI YGGCCR 5 cut(s) 81, 102, 816, 1528, 1655
Eam1104I CTCTTC 1 cut(s) 1238
EarI CTCTTC 1 cut(s) 1238
Eco130I CCWWGG 1 cut(s) 1848
Eco147I AGGCCT 1 cut(s) 1716
Eco32I GATATC 1 cut(s) 1735
Eco47I GGWCC 2 cut(s) 49, 481
Eco57I CTGAAG 4 cut(s) 531, 950, 1011, 1607
Eco88I CYCGRG 3 cut(s) 865, 1157, 1392
EcoNI CCTNNNNNAGG 1 cut(s) 1710
EcoRI GAATTC 1 cut(s) 526
EcoRII CCWGG 2 cut(s) 818, 1453
EcoRV GATATC 1 cut(s) 1735
EcoT14I CCWWGG 1 cut(s) 1848
EcoT22I ATGCAT 3 cut(s) 664, 946, 1795
ErhI CCWWGG 1 cut(s) 1848
FaqI GGGAC 5 cut(s) 62, 494, 572, 1379, 1556
FauI CCCGC 1 cut(s) 470
FblI GTMKAC 2 cut(s) 633, 2100
Fnu4HI GCNGC 7 cut(s) 1123, 1186, 1251, 1314, 1407, 1410, 1459
FseI GGCCGGCC 1 cut(s) 1534
Fsp4HI GCNGC 7 cut(s) 1123, 1186, 1251, 1314, 1407, 1410, 1459
FspBI CTAG 6 cut(s) 147, 1283, 1518, 1539, 1859, 1970
GluI GCNGC 7 cut(s) 1123, 1186, 1251, 1314, 1407, 1410, 1459
HaeIII GGCC 8 cut(s) 83, 104, 818, 1122, 1530, 1534, 1657, 1716
HapII CCGG 8 cut(s) 80, 101, 263, 683, 1041, 1393, 1531, 1647
HindIII AAGCTT 2 cut(s) 829, 1484
HpaII CCGG 8 cut(s) 80, 101, 263, 683, 1041, 1393, 1531, 1647
HphI GGTGA 4 cut(s) 82, 1867, 1913, 2086
Hpy166II GTNNAC 3 cut(s) 634, 2077, 2101
Hpy8I GTNNAC 3 cut(s) 634, 2077, 2101
Hpy99I CGWCG 1 cut(s) 329
HpyAV CCTTC 8 cut(s) 74, 680, 713, 749, 925, 1066, 1919, 2002
HpyCH4III ACNGT 5 cut(s) 94, 448, 485, 1331, 2000
HpyCH4IV ACGT 1 cut(s) 675
HpyF3I CTNAG 6 cut(s) 351, 369, 832, 998, 1214, 1511
HpySE526I ACGT 1 cut(s) 675
Kpn2I TCCGGA 1 cut(s) 682
KroI GCCGGC 1 cut(s) 1530
KroNI GCCGGC 1 cut(s) 1532
Kzo9I GATC 2 cut(s) 679, 1987
LmnI GCTCC 5 cut(s) 128, 355, 416, 1955, 2039
Lsp1109I GCAGC 6 cut(s) 1197, 1262, 1300, 1393, 1421, 1470
LweI GCATC 2 cut(s) 649, 1115
MaeI CTAG 6 cut(s) 147, 1283, 1518, 1539, 1859, 1970
MaeII ACGT 1 cut(s) 675
MaeIII GTNAC 7 cut(s) 53, 94, 505, 1043, 1445, 1556, 1901
MalI GATC 2 cut(s) 681, 1989
MboI GATC 2 cut(s) 679, 1987
MboII GAAGA 8 cut(s) 154, 620, 628, 848, 1255, 1325, 1600, 1760
MfeI CAATTG 2 cut(s) 1633, 1662
MhlI GDGCHC 3 cut(s) 731, 1675, 1960
MlsI TGGCCA 2 cut(s) 818, 1657
MluCI AATT 8 cut(s) 526, 774, 809, 1465, 1633, 1662, 1913, 1945
MluNI TGGCCA 2 cut(s) 818, 1657
MlyI GAGTC 7 cut(s) 265, 356, 554, 696, 1147, 1219, 2025
MmeI TCCRAC 2 cut(s) 1007, 1748
Mox20I TGGCCA 2 cut(s) 818, 1657
Mph1103I ATGCAT 3 cut(s) 664, 946, 1795
MroI TCCGGA 1 cut(s) 682
MroNI GCCGGC 1 cut(s) 1530
MscI TGGCCA 2 cut(s) 818, 1657
MseI TTAA 3 cut(s) 450, 1326, 2130
Msp20I TGGCCA 2 cut(s) 818, 1657
MspI CCGG 8 cut(s) 80, 101, 263, 683, 1041, 1393, 1531, 1647
MspR9I CCNGG 6 cut(s) 80, 820, 1041, 1393, 1394, 1455
MunI CAATTG 2 cut(s) 1633, 1662
Mva1269I GAATGC 1 cut(s) 419
MvaI CCWGG 2 cut(s) 820, 1455
MvnI CGCG 2 cut(s) 894, 1125
NaeI GCCGGC 1 cut(s) 1532
NciI CCSGG 4 cut(s) 80, 1041, 1393, 1394
NdeII GATC 2 cut(s) 679, 1987
NgoMIV GCCGGC 1 cut(s) 1530
NlaIV GGNNCC 5 cut(s) 130, 357, 482, 728, 2041
NmuCI GTSAC 5 cut(s) 53, 94, 1445, 1556, 1901
NsiI ATGCAT 3 cut(s) 664, 946, 1795
NspI RCATGY 4 cut(s) 77, 632, 1310, 1372
PaeR7I CTCGAG 1 cut(s) 1157
PagI TCATGA 1 cut(s) 1170
PceI AGGCCT 1 cut(s) 1716
PciI ACATGT 4 cut(s) 73, 628, 1306, 1368
PcsI WCGNNNNNNNCGW 1 cut(s) 302
PctI GAATGC 1 cut(s) 419
PdiI GCCGGC 1 cut(s) 1532
PkrI GCNGC 7 cut(s) 1124, 1187, 1252, 1315, 1408, 1411, 1460
PleI GAGTC 7 cut(s) 265, 355, 554, 696, 1146, 1218, 2024
PpsI GAGTC 7 cut(s) 265, 355, 554, 696, 1146, 1218, 2024
PscI ACATGT 4 cut(s) 73, 628, 1306, 1368
PshAI GACNNNNGTC 1 cut(s) 74
PsiI TTATAA 1 cut(s) 669
Psp6I CCWGG 2 cut(s) 818, 1453
PspGI CCWGG 2 cut(s) 818, 1453
PspN4I GGNNCC 5 cut(s) 130, 357, 482, 728, 2041
PspPI GGNCC 2 cut(s) 49, 481
PspXI VCTCGAGB 1 cut(s) 1157
PstI CTGCAG 2 cut(s) 1318, 1411
PstNI CAGNNNCTG 1 cut(s) 368
RigI GGCCGGCC 1 cut(s) 1534
RsaI GTAC 8 cut(s) 592, 746, 1356, 1491, 1807, 1943, 2127, 2174
RsaNI GTAC 8 cut(s) 591, 745, 1355, 1490, 1806, 1942, 2126, 2173
SaqAI TTAA 3 cut(s) 450, 1326, 2130
SatI GCNGC 7 cut(s) 1123, 1186, 1251, 1314, 1407, 1410, 1459
Sau3AI GATC 2 cut(s) 679, 1987
Sau96I GGNCC 2 cut(s) 49, 481
SchI GAGTC 7 cut(s) 265, 356, 554, 696, 1147, 1219, 2025
ScrFI CCNGG 6 cut(s) 80, 820, 1041, 1393, 1394, 1455
SduI GDGCHC 3 cut(s) 731, 1675, 1960
SfaNI GCATC 2 cut(s) 649, 1115
SfcI CTRYAG 2 cut(s) 1314, 1407
Sfr274I CTCGAG 1 cut(s) 1157
SinI GGWCC 2 cut(s) 49, 481
SlaI CTCGAG 1 cut(s) 1157
SmaI CCCGGG 1 cut(s) 1394
SmlI CTYRAG 3 cut(s) 179, 458, 1157
SmoI CTYRAG 3 cut(s) 179, 458, 1157
Sse9I AATT 8 cut(s) 526, 774, 809, 1465, 1633, 1662, 1913, 1945
SseBI AGGCCT 1 cut(s) 1716
SsiI CCGC 3 cut(s) 477, 892, 1123
SspMI CTAG 6 cut(s) 147, 1283, 1518, 1539, 1859, 1970
StuI AGGCCT 1 cut(s) 1716
StyD4I CCNGG 6 cut(s) 78, 818, 1039, 1391, 1392, 1453
StyI CCWWGG 1 cut(s) 1848
TaaI ACNGT 5 cut(s) 94, 448, 485, 1331, 2000
TaiI ACGT 1 cut(s) 678
TaqI TCGA 7 cut(s) 305, 750, 1158, 1569, 1995, 2014, 2032
TasI AATT 8 cut(s) 526, 774, 809, 1465, 1633, 1662, 1913, 1945
TatI WGTACW 4 cut(s) 744, 1489, 1941, 2172
TauI GCSGC 1 cut(s) 1125
Tru1I TTAA 3 cut(s) 450, 1326, 2130
Tru9I TTAA 3 cut(s) 450, 1326, 2130
TscAI CASTG 4 cut(s) 112, 451, 1002, 1561
TseFI GTSAC 5 cut(s) 53, 94, 1445, 1556, 1901
TseI GCWGC 6 cut(s) 1185, 1250, 1313, 1406, 1409, 1458
Tsp45I GTSAC 5 cut(s) 53, 94, 1445, 1556, 1901
TspGWI ACGGA 2 cut(s) 41, 1080
TspMI CCCGGG 1 cut(s) 1392
TspRI CASTG 4 cut(s) 112, 451, 1002, 1561
VpaK11BI GGWCC 2 cut(s) 49, 481
XagI CCTNNNNNAGG 1 cut(s) 1710
XapI RAATTY 2 cut(s) 526, 809
XbaI TCTAGA 1 cut(s) 1969
XceI RCATGY 4 cut(s) 77, 632, 1310, 1372
XhoI CTCGAG 1 cut(s) 1157
XmaI CCCGGG 1 cut(s) 1392
XmiI GTMKAC 2 cut(s) 633, 2100
XspI CTAG 6 cut(s) 147, 1283, 1518, 1539, 1859, 1970
Zsp2I ATGCAT 3 cut(s) 664, 946, 1795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.