Rh7DG362100

Ras-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0005599
Physical Location & Seq
Forward (+)
48166668 .. 48168601
1934 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG362100.1

Sequence Viewer

Length: 306 bp
ATGACCATAATGTTAATTGGTAGTAAGTGTGATCTTGCTCGTAGACGAGCTGTGAGCACAGAGGAAGGGGAGCAATTTGCAAAGGAACATCGATTGATCTTCATGGAGGCCTCTGCTAAAACTGCCCAGAATGTTGAGGAGGCATTCATAAAAACCGCTGCAACCATGTACAAGAAGATTCAAGATGGCGTTTTTGATGTATCAAATGAGGGGAGCCAAAGAGGGCAGGTGGATGGGACATATTCCTGTTTAAGTGTTGTTCAAGACCACCTTGATTACAAGCTCAATCCTTGTATATCTATATAG

Protein Analysis

101

Amino Acids

11.26

Weight (kDa)

5.63

Isoelectric Point (pI)

37.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ras PF00071 2 - 57 5.8e-16 Ras family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 217
Acc36I ACCTGC 1 cut(s) 217
AccI GTMKAC 1 cut(s) 43
AciI CCGC 1 cut(s) 156
AfaI GTAC 1 cut(s) 170
AgsI TTSAA 2 cut(s) 182, 263
AluBI AGCT 2 cut(s) 50, 283
AluI AGCT 2 cut(s) 50, 283
Alw21I GWGCWC 1 cut(s) 59
AoxI GGCC 1 cut(s) 108
ApeKI GCWGC 1 cut(s) 158
Bbv12I GWGCWC 1 cut(s) 59
BbvI GCAGC 1 cut(s) 145
BccI CCATC 2 cut(s) 179, 227
BfuAI ACCTGC 1 cut(s) 217
BisI GCNGC 1 cut(s) 159
BlsI GCNGC 1 cut(s) 160
BmiI GGNNCC 1 cut(s) 215
Bsa29I ATCGAT 1 cut(s) 91
BseCI ATCGAT 1 cut(s) 91
BseGI GGATG 1 cut(s) 238
BseRI GAGGAG 1 cut(s) 152
BseXI GCAGC 1 cut(s) 145
BshFI GGCC 1 cut(s) 110
BshVI ATCGAT 1 cut(s) 91
BsiHKAI GWGCWC 1 cut(s) 59
BslFI GGGAC 1 cut(s) 250
BsmFI GGGAC 1 cut(s) 250
BsmI GAATGC 1 cut(s) 143
BsnI GGCC 1 cut(s) 110
Bsp1286I GDGCHC 1 cut(s) 59
Bsp1407I TGTACA 1 cut(s) 168
Bsp143I GATC 2 cut(s) 31, 96
BspACI CCGC 1 cut(s) 156
BspANI GGCC 1 cut(s) 110
BspDI ATCGAT 1 cut(s) 91
BspLI GGNNCC 1 cut(s) 215
BspMI ACCTGC 1 cut(s) 217
BsrGI TGTACA 1 cut(s) 168
BssMI GATC 2 cut(s) 31, 96
BstAUI TGTACA 1 cut(s) 168
BstF5I GGATG 1 cut(s) 238
BstKTI GATC 2 cut(s) 34, 99
BstMBI GATC 2 cut(s) 31, 96
BstMWI GCNNNNNNNGC 1 cut(s) 122
BstV1I GCAGC 1 cut(s) 145
Bsu15I ATCGAT 1 cut(s) 91
BsuRI GGCC 1 cut(s) 110
BsuTUI ATCGAT 1 cut(s) 91
BtsCI GGATG 1 cut(s) 238
BveI ACCTGC 1 cut(s) 217
ClaI ATCGAT 1 cut(s) 91
Csp6I GTAC 1 cut(s) 169
CviAII CATG 2 cut(s) 103, 166
CviJI RGCY 4 cut(s) 50, 110, 216, 283
CviKI_1 RGCY 4 cut(s) 50, 110, 216, 283
CviQI GTAC 1 cut(s) 169
DpnI GATC 2 cut(s) 33, 98
DpnII GATC 2 cut(s) 31, 96
Eco147I AGGCCT 1 cut(s) 110
FaeI CATG 2 cut(s) 106, 169
FaiI YATR 8 cut(s) 8, 104, 149, 167, 241, 296, 302, 304
FalI AAGNNNNNCTT 2 cut(s) 255, 287
FaqI GGGAC 1 cut(s) 250
FatI CATG 2 cut(s) 102, 165
FblI GTMKAC 1 cut(s) 43
Fnu4HI GCNGC 1 cut(s) 159
FokI GGATG 1 cut(s) 245
Fsp4HI GCNGC 1 cut(s) 159
GluI GCNGC 1 cut(s) 159
HaeIII GGCC 1 cut(s) 110
Hin1II CATG 2 cut(s) 106, 169
HinfI GANTC 1 cut(s) 178
Hpy166II GTNNAC 1 cut(s) 44
Hpy188III TCNNGA 2 cut(s) 182, 263
Hpy8I GTNNAC 1 cut(s) 44
HpyAV CCTTC 1 cut(s) 59
HpyCH4V TGCA 2 cut(s) 80, 161
HpyF10VI GCNNNNNNNGC 1 cut(s) 122
Hsp92II CATG 2 cut(s) 106, 169
Kzo9I GATC 2 cut(s) 31, 96
LmnI GCTCC 2 cut(s) 70, 213
LpnPI CCDG 3 cut(s) 140, 212, 259
Lsp1109I GCAGC 1 cut(s) 145
MalI GATC 2 cut(s) 33, 98
MboI GATC 2 cut(s) 31, 96
MboII GAAGA 2 cut(s) 91, 187
MhlI GDGCHC 1 cut(s) 59
MluCI AATT 2 cut(s) 15, 74
MnlI CCTC 7 cut(s) 55, 100, 121, 130, 133, 202, 215
MseI TTAA 2 cut(s) 14, 251
MspA1I CMGCKG 1 cut(s) 158
Mva1269I GAATGC 1 cut(s) 143
MwoI GCNNNNNNNGC 1 cut(s) 122
NdeII GATC 2 cut(s) 31, 96
NlaIII CATG 2 cut(s) 106, 169
NlaIV GGNNCC 1 cut(s) 215
PaqCI CACCTGC 1 cut(s) 217
PceI AGGCCT 1 cut(s) 110
PctI GAATGC 1 cut(s) 143
PfeI GAWTC 1 cut(s) 178
PkrI GCNGC 1 cut(s) 160
PspN4I GGNNCC 1 cut(s) 215
RsaI GTAC 1 cut(s) 170
RsaNI GTAC 1 cut(s) 169
SaqAI TTAA 2 cut(s) 14, 251
SatI GCNGC 1 cut(s) 159
Sau3AI GATC 2 cut(s) 31, 96
SduI GDGCHC 1 cut(s) 59
SetI ASST 4 cut(s) 52, 231, 273, 285
Sse9I AATT 2 cut(s) 15, 74
SseBI AGGCCT 1 cut(s) 110
SsiI CCGC 1 cut(s) 156
StuI AGGCCT 1 cut(s) 110
TaqI TCGA 1 cut(s) 91
TasI AATT 2 cut(s) 15, 74
TatI WGTACW 1 cut(s) 168
TfiI GAWTC 1 cut(s) 178
Tru1I TTAA 2 cut(s) 14, 251
Tru9I TTAA 2 cut(s) 14, 251
TseI GCWGC 1 cut(s) 158
TspDTI ATGAA 2 cut(s) 91, 136
XmiI GTMKAC 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.