Nudix hydrolase 3-like
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1188100.v1.1 MD00G1188200.v1.1 MD09G1228800.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0132171 |
| rosa_laevigata | RLG00000008571 RLG00000008648 RLG00000010128 RLG00000011746 RLG00000012867 RLG00000019236 |
| rosa_multiflora | Rmu_sc0003058.1_g000007 |
| rosa_samantha | Rh1BG137400 Rh2AG355900 Rh2BG361900 Rh2DG379000 Rh3DG331500 Rh5BG403200 Rh5DG469700 Rh6AG232700 |
| rosa_wichuraiana | Rw2G028900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 444 |
| AclI | AACGTT | 1 cut(s) | 140 |
| AcsI | RAATTY | 3 cut(s) | 73, 371, 403 |
| AfaI | GTAC | 2 cut(s) | 87, 433 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 502 |
| AflII | CTTAAG | 1 cut(s) | 62 |
| AgsI | TTSAA | 4 cut(s) | 82, 256, 408, 464 |
| AluBI | AGCT | 4 cut(s) | 105, 326, 344, 449 |
| AluI | AGCT | 4 cut(s) | 105, 326, 344, 449 |
| Alw26I | GTCTC | 1 cut(s) | 415 |
| AoxI | GGCC | 2 cut(s) | 235, 355 |
| ApaI | GGGCCC | 1 cut(s) | 239 |
| ApoI | RAATTY | 3 cut(s) | 73, 371, 403 |
| AspLEI | GCGC | 1 cut(s) | 276 |
| AspS9I | GGNCC | 2 cut(s) | 235, 236 |
| AsuHPI | GGTGA | 1 cut(s) | 485 |
| AxyI | CCTNAGG | 2 cut(s) | 222, 497 |
| BaeGI | GKGCMC | 2 cut(s) | 239, 367 |
| BanII | GRGCYC | 1 cut(s) | 239 |
| BcoDI | GTCTC | 1 cut(s) | 415 |
| BfaI | CTAG | 2 cut(s) | 411, 535 |
| BfmI | CTRYAG | 1 cut(s) | 100 |
| BfrI | CTTAAG | 1 cut(s) | 62 |
| BglII | AGATCT | 1 cut(s) | 36 |
| BmgT120I | GGNCC | 2 cut(s) | 235, 236 |
| BmiI | GGNNCC | 1 cut(s) | 237 |
| BmsI | GCATC | 2 cut(s) | 178, 445 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 502 |
| Bse21I | CCTNAGG | 2 cut(s) | 222, 497 |
| BseGI | GGATG | 1 cut(s) | 232 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 502 |
| BseMII | CTCAG | 3 cut(s) | 196, 236, 336 |
| BseSI | GKGCMC | 2 cut(s) | 239, 367 |
| BshFI | GGCC | 2 cut(s) | 237, 357 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 502 |
| BsmAI | GTCTC | 1 cut(s) | 415 |
| BsnI | GGCC | 2 cut(s) | 237, 357 |
| Bsp120I | GGGCCC | 1 cut(s) | 235 |
| Bsp1286I | GDGCHC | 2 cut(s) | 239, 367 |
| Bsp143I | GATC | 2 cut(s) | 36, 286 |
| BspACI | CCGC | 1 cut(s) | 444 |
| BspANI | GGCC | 2 cut(s) | 237, 357 |
| BspCNI | CTCAG | 3 cut(s) | 195, 235, 335 |
| BspLI | GGNNCC | 1 cut(s) | 237 |
| BspTI | CTTAAG | 1 cut(s) | 62 |
| BssMI | GATC | 2 cut(s) | 36, 286 |
| Bst4CI | ACNGT | 1 cut(s) | 247 |
| BstAFI | CTTAAG | 1 cut(s) | 62 |
| BstDEI | CTNAG | 4 cut(s) | 182, 222, 322, 497 |
| BstF5I | GGATG | 1 cut(s) | 232 |
| BstHHI | GCGC | 1 cut(s) | 276 |
| BstKTI | GATC | 2 cut(s) | 39, 289 |
| BstMAI | GTCTC | 1 cut(s) | 415 |
| BstMBI | GATC | 2 cut(s) | 36, 286 |
| BstNSI | RCATGY | 1 cut(s) | 470 |
| BstSFI | CTRYAG | 1 cut(s) | 100 |
| BstSLI | GKGCMC | 2 cut(s) | 239, 367 |
| BstX2I | RGATCY | 1 cut(s) | 36 |
| BstYI | RGATCY | 1 cut(s) | 36 |
| Bsu36I | CCTNAGG | 2 cut(s) | 222, 497 |
| BsuRI | GGCC | 2 cut(s) | 237, 357 |
| BtsCI | GGATG | 1 cut(s) | 232 |
| BtsI | GCAGTG | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 2 cut(s) | 120, 365 |
| CfoI | GCGC | 1 cut(s) | 276 |
| Cfr13I | GGNCC | 2 cut(s) | 235, 236 |
| Csp6I | GTAC | 2 cut(s) | 86, 432 |
| CviAII | CATG | 1 cut(s) | 467 |
| CviJI | RGCY | 9 cut(s) | 105, 203, 237, 326, 344, 357, 414, 449, 482 |
| CviKI_1 | RGCY | 9 cut(s) | 105, 203, 237, 326, 344, 357, 414, 449, 482 |
| CviQI | GTAC | 2 cut(s) | 86, 432 |
| DdeI | CTNAG | 4 cut(s) | 182, 222, 322, 497 |
| DpnI | GATC | 2 cut(s) | 38, 288 |
| DpnII | GATC | 2 cut(s) | 36, 286 |
| EciI | GGCGGA | 1 cut(s) | 459 |
| Eco24I | GRGCYC | 1 cut(s) | 239 |
| Eco81I | CCTNAGG | 2 cut(s) | 222, 497 |
| EcoO109I | RGGNCCY | 2 cut(s) | 235, 236 |
| EcoRI | GAATTC | 1 cut(s) | 403 |
| EcoT38I | GRGCYC | 1 cut(s) | 239 |
| FaeI | CATG | 1 cut(s) | 470 |
| FaiI | YATR | 7 cut(s) | 145, 213, 302, 350, 452, 468, 532 |
| FatI | CATG | 1 cut(s) | 466 |
| FokI | GGATG | 1 cut(s) | 239 |
| FriOI | GRGCYC | 1 cut(s) | 239 |
| FspBI | CTAG | 2 cut(s) | 411, 535 |
| GlaI | GCGC | 1 cut(s) | 275 |
| HaeIII | GGCC | 2 cut(s) | 237, 357 |
| HhaI | GCGC | 1 cut(s) | 276 |
| Hin1II | CATG | 1 cut(s) | 470 |
| Hin6I | GCGC | 1 cut(s) | 274 |
| HinP1I | GCGC | 1 cut(s) | 274 |
| HinfI | GANTC | 1 cut(s) | 180 |
| HphI | GGTGA | 1 cut(s) | 485 |
| Hpy188I | TCNGA | 2 cut(s) | 70, 185 |
| Hpy188III | TCNNGA | 2 cut(s) | 165, 224 |
| HpyAV | CCTTC | 1 cut(s) | 76 |
| HpyCH4III | ACNGT | 1 cut(s) | 247 |
| HpyCH4IV | ACGT | 1 cut(s) | 140 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 125, 191, 310, 396 |
| HpyF3I | CTNAG | 4 cut(s) | 182, 222, 322, 497 |
| HpySE526I | ACGT | 1 cut(s) | 140 |
| Hsp92II | CATG | 1 cut(s) | 470 |
| HspAI | GCGC | 1 cut(s) | 274 |
| Kzo9I | GATC | 2 cut(s) | 36, 286 |
| LmnI | GCTCC | 2 cut(s) | 152, 446 |
| LpnPI | CCDG | 6 cut(s) | 30, 74, 162, 163, 178, 209 |
| LweI | GCATC | 2 cut(s) | 178, 445 |
| MaeI | CTAG | 2 cut(s) | 411, 535 |
| MaeII | ACGT | 1 cut(s) | 140 |
| MaeIII | GTNAC | 3 cut(s) | 118, 152, 491 |
| MalI | GATC | 2 cut(s) | 38, 288 |
| MboI | GATC | 2 cut(s) | 36, 286 |
| MboII | GAAGA | 2 cut(s) | 344, 412 |
| MflI | RGATCY | 1 cut(s) | 36 |
| MhlI | GDGCHC | 2 cut(s) | 239, 367 |
| MluCI | AATT | 4 cut(s) | 73, 371, 403, 517 |
| MlyI | GAGTC | 1 cut(s) | 174 |
| MmeI | TCCRAC | 1 cut(s) | 161 |
| MnlI | CCTC | 7 cut(s) | 161, 168, 193, 231, 249, 284, 468 |
| MseI | TTAA | 2 cut(s) | 20, 63 |
| MspCI | CTTAAG | 1 cut(s) | 62 |
| NdeII | GATC | 2 cut(s) | 36, 286 |
| NlaIII | CATG | 1 cut(s) | 470 |
| NlaIV | GGNNCC | 1 cut(s) | 237 |
| NmuCI | GTSAC | 2 cut(s) | 118, 491 |
| NspI | RCATGY | 1 cut(s) | 470 |
| PleI | GAGTC | 1 cut(s) | 174 |
| PpsI | GAGTC | 1 cut(s) | 174 |
| Psp1406I | AACGTT | 1 cut(s) | 140 |
| PspN4I | GGNNCC | 1 cut(s) | 237 |
| PspOMI | GGGCCC | 1 cut(s) | 235 |
| PspPI | GGNCC | 2 cut(s) | 235, 236 |
| PsuI | RGATCY | 1 cut(s) | 36 |
| RsaI | GTAC | 2 cut(s) | 87, 433 |
| RsaNI | GTAC | 2 cut(s) | 86, 432 |
| SaqAI | TTAA | 2 cut(s) | 20, 63 |
| Sau3AI | GATC | 2 cut(s) | 36, 286 |
| Sau96I | GGNCC | 2 cut(s) | 235, 236 |
| SchI | GAGTC | 1 cut(s) | 174 |
| SduI | GDGCHC | 2 cut(s) | 239, 367 |
| SfaNI | GCATC | 2 cut(s) | 178, 445 |
| SfcI | CTRYAG | 1 cut(s) | 100 |
| SmlI | CTYRAG | 1 cut(s) | 62 |
| SmoI | CTYRAG | 1 cut(s) | 62 |
| Sse9I | AATT | 4 cut(s) | 73, 371, 403, 517 |
| SsiI | CCGC | 1 cut(s) | 444 |
| SspMI | CTAG | 2 cut(s) | 411, 535 |
| TaaI | ACNGT | 1 cut(s) | 247 |
| TaiI | ACGT | 1 cut(s) | 143 |
| TaqI | TCGA | 2 cut(s) | 107, 289 |
| TaqII | GACCGA | 1 cut(s) | 42 |
| TasI | AATT | 4 cut(s) | 73, 371, 403, 517 |
| Tru1I | TTAA | 2 cut(s) | 20, 63 |
| Tru9I | TTAA | 2 cut(s) | 20, 63 |
| TscAI | CASTG | 2 cut(s) | 127, 372 |
| TseFI | GTSAC | 2 cut(s) | 118, 491 |
| Tsp45I | GTSAC | 2 cut(s) | 118, 491 |
| TspDTI | ATGAA | 1 cut(s) | 448 |
| TspRI | CASTG | 2 cut(s) | 127, 372 |
| Vha464I | CTTAAG | 1 cut(s) | 62 |
| XapI | RAATTY | 3 cut(s) | 73, 371, 403 |
| XceI | RCATGY | 1 cut(s) | 470 |
| XspI | CTAG | 2 cut(s) | 411, 535 |