Rh2AG559900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
79038450 .. 79038935
486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG559900.1

Sequence Viewer

Length: 231 bp
ATGGCTAATCTGGCAGCTGCCGCAGCTCGACAAGCCGCCAATTCACTCCGTCTGTCTTCGTCCAGAACCGCCGTTCAATCATCTACTCTAATCCAGCGACGCGGCCTAGCCGGCGCTGCAGAATGGTTAATTGAATTTCTATGGGCTGTGATGGACTTGATGCACTTTCAATTGACCCATTTGTTTGGAATTGAATACACAGAAGAAAAATTTAGAATCTTTATGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

76

Amino Acids

8.53

Weight (kDa)

8.38

Isoelectric Point (pI)

62.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 102
AciI CCGC 4 cut(s) 21, 36, 69, 102
AcsI RAATTY 2 cut(s) 134, 209
AgsI TTSAA 4 cut(s) 77, 134, 170, 194
AluBI AGCT 2 cut(s) 17, 26
AluI AGCT 2 cut(s) 17, 26
AoxI GGCC 1 cut(s) 103
ApeKI GCWGC 4 cut(s) 14, 17, 23, 116
ApoI RAATTY 2 cut(s) 134, 209
AspLEI GCGC 1 cut(s) 116
BbsI GAAGAC 1 cut(s) 48
BbvI GCAGC 4 cut(s) 4, 26, 35, 103
BccI CCATC 1 cut(s) 145
BceAI ACGGC 1 cut(s) 56
BfaI CTAG 1 cut(s) 107
BfmI CTRYAG 1 cut(s) 117
BfoI RGCGCY 1 cut(s) 117
BglI GCCNNNNNGGC 1 cut(s) 111
BisI GCNGC 7 cut(s) 15, 18, 21, 24, 36, 103, 117
BlsI GCNGC 7 cut(s) 16, 19, 22, 25, 37, 104, 118
BmsI GCATC 1 cut(s) 150
BpiI GAAGAC 1 cut(s) 48
Bse118I RCCGGY 1 cut(s) 110
BseXI GCAGC 4 cut(s) 4, 26, 35, 103
Bsh1236I CGCG 1 cut(s) 102
BshFI GGCC 1 cut(s) 105
BsiSI CCGG 1 cut(s) 111
BsnI GGCC 1 cut(s) 105
BspACI CCGC 4 cut(s) 21, 36, 69, 102
BspANI GGCC 1 cut(s) 105
BspFNI CGCG 1 cut(s) 102
BspMAI CTGCAG 1 cut(s) 121
BsrFI RCCGGY 1 cut(s) 110
BssAI RCCGGY 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 112
BstDEI CTNAG 1 cut(s) 228
BstFNI CGCG 1 cut(s) 102
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 1 cut(s) 116
BstMWI GCNNNNNNNGC 6 cut(s) 11, 20, 23, 32, 111, 116
BstSFI CTRYAG 1 cut(s) 117
BstUI CGCG 1 cut(s) 102
BstV1I GCAGC 4 cut(s) 4, 26, 35, 103
BstV2I GAAGAC 1 cut(s) 48
BstXI CCANNNNNNTGG 1 cut(s) 185
BsuRI GGCC 1 cut(s) 105
Cac8I GCNNGC 1 cut(s) 112
CfoI GCGC 1 cut(s) 116
Cfr10I RCCGGY 1 cut(s) 110
CseI GACGC 1 cut(s) 108
CviJI RGCY 8 cut(s) 5, 17, 26, 35, 105, 110, 146, 227
CviKI_1 RGCY 8 cut(s) 5, 17, 26, 35, 105, 110, 146, 227
DdeI CTNAG 1 cut(s) 228
FaiI YATR 2 cut(s) 142, 224
Fnu4HI GCNGC 7 cut(s) 15, 18, 21, 24, 36, 103, 117
Fsp4HI GCNGC 7 cut(s) 15, 18, 21, 24, 36, 103, 117
FspBI CTAG 1 cut(s) 107
GlaI GCGC 1 cut(s) 115
GluI GCNGC 7 cut(s) 15, 18, 21, 24, 36, 103, 117
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 1 cut(s) 105
HapII CCGG 1 cut(s) 111
HgaI GACGC 1 cut(s) 108
HhaI GCGC 1 cut(s) 116
Hin6I GCGC 1 cut(s) 114
HinP1I GCGC 1 cut(s) 114
HinfI GANTC 1 cut(s) 216
HpaII CCGG 1 cut(s) 111
Hpy188III TCNNGA 1 cut(s) 63
Hpy99I CGWCG 1 cut(s) 102
HpyCH4V TGCA 2 cut(s) 119, 163
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 20, 23, 32, 111, 116
HpyF3I CTNAG 1 cut(s) 228
HspAI GCGC 1 cut(s) 114
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
LpnPI CCDG 3 cut(s) 76, 107, 124
Lsp1109I GCAGC 4 cut(s) 4, 26, 35, 103
LweI GCATC 1 cut(s) 150
MaeI CTAG 1 cut(s) 107
MboII GAAGA 2 cut(s) 48, 215
MfeI CAATTG 1 cut(s) 170
MluCI AATT 6 cut(s) 40, 129, 134, 170, 189, 209
MroNI GCCGGC 1 cut(s) 110
MseI TTAA 1 cut(s) 128
MspA1I CMGCKG 1 cut(s) 17
MspI CCGG 1 cut(s) 111
MunI CAATTG 1 cut(s) 170
MvnI CGCG 1 cut(s) 102
MwoI GCNNNNNNNGC 6 cut(s) 11, 20, 23, 32, 111, 116
NaeI GCCGGC 1 cut(s) 112
NgoMIV GCCGGC 1 cut(s) 110
PdiI GCCGGC 1 cut(s) 112
PfeI GAWTC 1 cut(s) 216
PkrI GCNGC 7 cut(s) 16, 19, 22, 25, 37, 104, 118
PstI CTGCAG 1 cut(s) 121
PvuII CAGCTG 1 cut(s) 17
SaqAI TTAA 1 cut(s) 128
SatI GCNGC 7 cut(s) 15, 18, 21, 24, 36, 103, 117
SetI ASST 2 cut(s) 19, 28
SfaNI GCATC 1 cut(s) 150
SfcI CTRYAG 1 cut(s) 117
SgeI CNNG 9 cut(s) 23, 39, 44, 75, 106, 113, 119, 123, 169
Sse9I AATT 6 cut(s) 40, 129, 134, 170, 189, 209
SsiI CCGC 4 cut(s) 21, 36, 69, 102
SspMI CTAG 1 cut(s) 107
TaqI TCGA 1 cut(s) 28
TasI AATT 6 cut(s) 40, 129, 134, 170, 189, 209
TauI GCSGC 3 cut(s) 23, 38, 105
TfiI GAWTC 1 cut(s) 216
Tru1I TTAA 1 cut(s) 128
Tru9I TTAA 1 cut(s) 128
TseI GCWGC 4 cut(s) 14, 17, 23, 116
TspGWI ACGGA 1 cut(s) 38
XapI RAATTY 2 cut(s) 134, 209
XspI CTAG 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.