snRNA-activating protein complex
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0108841 |
| rosa_laevigata | RLG00000020671 |
| rosa_multiflora | Rmu_sc0003830.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00003190 Rroxscaffold_1G00015540 |
| rosa_rugosa | Rorug02G0436900 Rorug05G0467200 |
| rosa_samantha | Rh2AG206800 Rh2AG498900 Rh2AG499100 Rh2BG217900 Rh2CG209900 Rh2CG485500 Rh2DG213100 Rh5AG431500 Rh5AG521000 Rh5BG447600 Rh5BG543000 Rh5CG469600 Rh5CG565800 Rh5DG460200 Rh5DG552800 Rh6CG050900 |
| rosa_wichuraiana | Rw5G040450 Rw5G048320 Rw6G002720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 78 |
| AclWI | GGATC | 1 cut(s) | 232 |
| AcuI | CTGAAG | 2 cut(s) | 131, 156 |
| AdeI | CACNNNGTG | 1 cut(s) | 13 |
| AgsI | TTSAA | 1 cut(s) | 194 |
| AluBI | AGCT | 3 cut(s) | 52, 145, 160 |
| AluI | AGCT | 3 cut(s) | 52, 145, 160 |
| Alw21I | GWGCWC | 1 cut(s) | 54 |
| Alw26I | GTCTC | 1 cut(s) | 122 |
| AlwI | GGATC | 1 cut(s) | 232 |
| AspS9I | GGNCC | 2 cut(s) | 72, 98 |
| AsuHPI | GGTGA | 1 cut(s) | 50 |
| AvaII | GGWCC | 2 cut(s) | 72, 98 |
| BanII | GRGCYC | 1 cut(s) | 54 |
| BbsI | GAAGAC | 2 cut(s) | 24, 120 |
| Bbv12I | GWGCWC | 1 cut(s) | 54 |
| BcoDI | GTCTC | 1 cut(s) | 122 |
| Bme18I | GGWCC | 2 cut(s) | 72, 98 |
| BmgT120I | GGNCC | 2 cut(s) | 72, 98 |
| BmiI | GGNNCC | 1 cut(s) | 73 |
| BpiI | GAAGAC | 2 cut(s) | 24, 120 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 38, 70, 85, 117 |
| BpmI | CTGGAG | 1 cut(s) | 182 |
| BsaI | GGTCTC | 1 cut(s) | 122 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 149, 179 |
| Bse1I | ACTGG | 1 cut(s) | 124 |
| BseMII | CTCAG | 1 cut(s) | 69 |
| BseNI | ACTGG | 1 cut(s) | 124 |
| BseRI | GAGGAG | 3 cut(s) | 56, 59, 62 |
| BsiHKAI | GWGCWC | 1 cut(s) | 54 |
| BslFI | GGGAC | 1 cut(s) | 85 |
| BsmAI | GTCTC | 1 cut(s) | 122 |
| BsmFI | GGGAC | 1 cut(s) | 85 |
| Bso31I | GGTCTC | 1 cut(s) | 122 |
| Bsp1286I | GDGCHC | 1 cut(s) | 54 |
| Bsp143I | GATC | 1 cut(s) | 224 |
| BspCNI | CTCAG | 1 cut(s) | 68 |
| BspLI | GGNNCC | 1 cut(s) | 73 |
| BspPI | GGATC | 1 cut(s) | 232 |
| BspTNI | GGTCTC | 1 cut(s) | 122 |
| BsrI | ACTGG | 1 cut(s) | 124 |
| BssMI | GATC | 1 cut(s) | 224 |
| Bst4CI | ACNGT | 1 cut(s) | 76 |
| Bst6I | CTCTTC | 1 cut(s) | 125 |
| BstDEI | CTNAG | 1 cut(s) | 55 |
| BstKTI | GATC | 1 cut(s) | 227 |
| BstMAI | GTCTC | 1 cut(s) | 122 |
| BstMBI | GATC | 1 cut(s) | 224 |
| BstV2I | GAAGAC | 2 cut(s) | 24, 120 |
| BtgZI | GCGATG | 1 cut(s) | 165 |
| Cfr13I | GGNCC | 2 cut(s) | 72, 98 |
| CseI | GACGC | 1 cut(s) | 29 |
| CviJI | RGCY | 7 cut(s) | 30, 52, 145, 160, 170, 201, 244 |
| CviKI_1 | RGCY | 7 cut(s) | 30, 52, 145, 160, 170, 201, 244 |
| DdeI | CTNAG | 1 cut(s) | 55 |
| DpnI | GATC | 1 cut(s) | 226 |
| DpnII | GATC | 1 cut(s) | 224 |
| DraIII | CACNNNGTG | 1 cut(s) | 13 |
| Eam1104I | CTCTTC | 1 cut(s) | 125 |
| EarI | CTCTTC | 1 cut(s) | 125 |
| Ecl136II | GAGCTC | 1 cut(s) | 52 |
| Eco24I | GRGCYC | 1 cut(s) | 54 |
| Eco31I | GGTCTC | 1 cut(s) | 122 |
| Eco47I | GGWCC | 2 cut(s) | 72, 98 |
| Eco53kI | GAGCTC | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 2 cut(s) | 131, 156 |
| EcoICRI | GAGCTC | 1 cut(s) | 52 |
| EcoT38I | GRGCYC | 1 cut(s) | 54 |
| FaiI | YATR | 5 cut(s) | 12, 92, 247, 261, 272 |
| FaqI | GGGAC | 1 cut(s) | 85 |
| FblI | GTMKAC | 1 cut(s) | 78 |
| FriOI | GRGCYC | 1 cut(s) | 54 |
| GsuI | CTGGAG | 1 cut(s) | 182 |
| HgaI | GACGC | 1 cut(s) | 29 |
| HphI | GGTGA | 1 cut(s) | 50 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 1 cut(s) | 240 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| HpyCH4III | ACNGT | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 1 cut(s) | 212 |
| HpyF3I | CTNAG | 1 cut(s) | 55 |
| Kzo9I | GATC | 1 cut(s) | 224 |
| LmnI | GCTCC | 2 cut(s) | 49, 157 |
| LpnPI | CCDG | 4 cut(s) | 134, 137, 146, 159 |
| MalI | GATC | 1 cut(s) | 226 |
| MboI | GATC | 1 cut(s) | 224 |
| MboII | GAAGA | 3 cut(s) | 29, 112, 120 |
| MhlI | GDGCHC | 1 cut(s) | 54 |
| MnlI | CCTC | 7 cut(s) | 34, 37, 40, 111, 191, 225, 234 |
| MseI | TTAA | 1 cut(s) | 84 |
| NdeII | GATC | 1 cut(s) | 224 |
| NlaIV | GGNNCC | 1 cut(s) | 73 |
| Psp124BI | GAGCTC | 1 cut(s) | 54 |
| PspN4I | GGNNCC | 1 cut(s) | 73 |
| PspPI | GGNCC | 2 cut(s) | 72, 98 |
| SacI | GAGCTC | 1 cut(s) | 54 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| Sau3AI | GATC | 1 cut(s) | 224 |
| Sau96I | GGNCC | 2 cut(s) | 72, 98 |
| SduI | GDGCHC | 1 cut(s) | 54 |
| SetI | ASST | 4 cut(s) | 54, 147, 162, 178 |
| SgeI | CNNG | 7 cut(s) | 116, 136, 152, 161, 173, 186, 219 |
| SinI | GGWCC | 2 cut(s) | 72, 98 |
| SstI | GAGCTC | 1 cut(s) | 54 |
| TaaI | ACNGT | 1 cut(s) | 76 |
| TaqII | GACCGA | 1 cut(s) | 104 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TspDTI | ATGAA | 2 cut(s) | 168, 276 |
| VpaK11BI | GGWCC | 2 cut(s) | 72, 98 |
| XmiI | GTMKAC | 1 cut(s) | 78 |