snRNA-activating protein complex
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0108841 |
| rosa_laevigata | RLG00000020671 |
| rosa_multiflora | Rmu_sc0003830.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00003190 Rroxscaffold_1G00015540 |
| rosa_rugosa | Rorug02G0436900 Rorug05G0467200 |
| rosa_samantha | Rh2AG206800 Rh2AG498900 Rh2AG499100 Rh2BG217900 Rh2CG209900 Rh2CG485500 Rh2DG213100 Rh5AG431500 Rh5AG521000 Rh5BG447600 Rh5BG543000 Rh5CG469600 Rh5CG565800 Rh5DG460200 Rh5DG552800 Rh6CG050900 |
| rosa_wichuraiana | Rw5G040450 Rw5G048320 Rw6G002720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 56, 128, 185 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 48 |
| AluBI | AGCT | 3 cut(s) | 37, 86, 208 |
| AluI | AGCT | 3 cut(s) | 37, 86, 208 |
| Alw21I | GWGCWC | 1 cut(s) | 39 |
| Alw26I | GTCTC | 2 cut(s) | 62, 175 |
| AlwI | GGATC | 3 cut(s) | 56, 128, 185 |
| AspLEI | GCGC | 1 cut(s) | 274 |
| BanII | GRGCYC | 1 cut(s) | 39 |
| Bbv12I | GWGCWC | 1 cut(s) | 39 |
| BccI | CCATC | 1 cut(s) | 157 |
| BcoDI | GTCTC | 2 cut(s) | 62, 175 |
| BfaI | CTAG | 1 cut(s) | 158 |
| BmsI | GCATC | 1 cut(s) | 259 |
| BsaBI | GATNNNNATC | 1 cut(s) | 132 |
| BsaI | GGTCTC | 1 cut(s) | 175 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 48 |
| Bse8I | GATNNNNATC | 1 cut(s) | 132 |
| BseGI | GGATG | 2 cut(s) | 130, 265 |
| BseJI | GATNNNNATC | 1 cut(s) | 132 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 48 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BsiHKAI | GWGCWC | 1 cut(s) | 39 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 48 |
| BsmAI | GTCTC | 2 cut(s) | 62, 175 |
| Bso31I | GGTCTC | 1 cut(s) | 175 |
| Bsp1286I | GDGCHC | 1 cut(s) | 39 |
| Bsp143I | GATC | 4 cut(s) | 61, 133, 190, 212 |
| BspCNI | CTCAG | 1 cut(s) | 58 |
| BspPI | GGATC | 3 cut(s) | 56, 128, 185 |
| BspTNI | GGTCTC | 1 cut(s) | 175 |
| BssMI | GATC | 4 cut(s) | 61, 133, 190, 212 |
| BstDEI | CTNAG | 2 cut(s) | 66, 209 |
| BstF5I | GGATG | 2 cut(s) | 130, 265 |
| BstHHI | GCGC | 1 cut(s) | 274 |
| BstKTI | GATC | 4 cut(s) | 64, 136, 193, 215 |
| BstMAI | GTCTC | 2 cut(s) | 62, 175 |
| BstMBI | GATC | 4 cut(s) | 61, 133, 190, 212 |
| BstX2I | RGATCY | 2 cut(s) | 61, 133 |
| BstYI | RGATCY | 2 cut(s) | 61, 133 |
| BtsCI | GGATG | 2 cut(s) | 130, 265 |
| CfoI | GCGC | 1 cut(s) | 274 |
| CviAII | CATG | 1 cut(s) | 216 |
| CviJI | RGCY | 4 cut(s) | 37, 86, 167, 208 |
| CviKI_1 | RGCY | 4 cut(s) | 37, 86, 167, 208 |
| DdeI | CTNAG | 2 cut(s) | 66, 209 |
| DpnI | GATC | 4 cut(s) | 63, 135, 192, 214 |
| DpnII | GATC | 4 cut(s) | 61, 133, 190, 212 |
| Ecl136II | GAGCTC | 1 cut(s) | 37 |
| Eco24I | GRGCYC | 1 cut(s) | 39 |
| Eco31I | GGTCTC | 1 cut(s) | 175 |
| Eco53kI | GAGCTC | 1 cut(s) | 37 |
| EcoICRI | GAGCTC | 1 cut(s) | 37 |
| EcoT38I | GRGCYC | 1 cut(s) | 39 |
| FaeI | CATG | 1 cut(s) | 219 |
| FaiI | YATR | 6 cut(s) | 93, 174, 198, 217, 284, 292 |
| FatI | CATG | 1 cut(s) | 215 |
| FokI | GGATG | 2 cut(s) | 137, 272 |
| FriOI | GRGCYC | 1 cut(s) | 39 |
| FspBI | CTAG | 1 cut(s) | 158 |
| GlaI | GCGC | 1 cut(s) | 273 |
| HhaI | GCGC | 1 cut(s) | 274 |
| Hin1II | CATG | 1 cut(s) | 219 |
| Hin6I | GCGC | 1 cut(s) | 272 |
| HinP1I | GCGC | 1 cut(s) | 272 |
| HindIII | AAGCTT | 2 cut(s) | 84, 206 |
| Hpy188I | TCNGA | 1 cut(s) | 29 |
| Hpy188III | TCNNGA | 3 cut(s) | 65, 102, 158 |
| HpyAV | CCTTC | 5 cut(s) | 25, 41, 115, 147, 229 |
| HpyCH4V | TGCA | 1 cut(s) | 219 |
| HpyF3I | CTNAG | 2 cut(s) | 66, 209 |
| Hsp92II | CATG | 1 cut(s) | 219 |
| HspAI | GCGC | 1 cut(s) | 272 |
| Kzo9I | GATC | 4 cut(s) | 61, 133, 190, 212 |
| LpnPI | CCDG | 3 cut(s) | 34, 78, 198 |
| LweI | GCATC | 1 cut(s) | 259 |
| MaeI | CTAG | 1 cut(s) | 158 |
| MalI | GATC | 4 cut(s) | 63, 135, 192, 214 |
| MboI | GATC | 4 cut(s) | 61, 133, 190, 212 |
| MboII | GAAGA | 3 cut(s) | 71, 143, 278 |
| MflI | RGATCY | 2 cut(s) | 61, 133 |
| MhlI | GDGCHC | 1 cut(s) | 39 |
| MnlI | CCTC | 2 cut(s) | 154, 204 |
| MseI | TTAA | 1 cut(s) | 255 |
| NdeII | GATC | 4 cut(s) | 61, 133, 190, 212 |
| NlaIII | CATG | 1 cut(s) | 219 |
| Psp124BI | GAGCTC | 1 cut(s) | 39 |
| PsuI | RGATCY | 2 cut(s) | 61, 133 |
| SacI | GAGCTC | 1 cut(s) | 39 |
| SaqAI | TTAA | 1 cut(s) | 255 |
| Sau3AI | GATC | 4 cut(s) | 61, 133, 190, 212 |
| SduI | GDGCHC | 1 cut(s) | 39 |
| SetI | ASST | 3 cut(s) | 39, 88, 210 |
| SfaNI | GCATC | 1 cut(s) | 259 |
| SgeI | CNNG | 7 cut(s) | 33, 77, 99, 114, 170, 197, 228 |
| SspMI | CTAG | 1 cut(s) | 158 |
| SstI | GAGCTC | 1 cut(s) | 39 |
| TaqI | TCGA | 1 cut(s) | 203 |
| Tru1I | TTAA | 1 cut(s) | 255 |
| Tru9I | TTAA | 1 cut(s) | 255 |
| TspDTI | ATGAA | 5 cut(s) | 60, 134, 144, 189, 279 |
| XbaI | TCTAGA | 1 cut(s) | 157 |
| XspI | CTAG | 1 cut(s) | 158 |