snRNA-activating protein complex
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0108841 |
| rosa_laevigata | RLG00000020671 |
| rosa_multiflora | Rmu_sc0003830.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00003190 Rroxscaffold_1G00015540 |
| rosa_rugosa | Rorug02G0436900 Rorug05G0467200 |
| rosa_samantha | Rh2AG206800 Rh2AG498900 Rh2AG499100 Rh2BG217900 Rh2CG209900 Rh2CG485500 Rh2DG213100 Rh5AG431500 Rh5AG521000 Rh5BG447600 Rh5BG543000 Rh5CG469600 Rh5CG565800 Rh5DG460200 Rh5DG552800 Rh6CG050900 |
| rosa_wichuraiana | Rw5G040450 Rw5G048320 Rw6G002720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 8, 197 |
| AgsI | TTSAA | 2 cut(s) | 111, 133 |
| AhlI | ACTAGT | 1 cut(s) | 299 |
| Alw21I | GWGCWC | 1 cut(s) | 151 |
| Alw26I | GTCTC | 3 cut(s) | 60, 71, 187 |
| AlwI | GGATC | 2 cut(s) | 8, 197 |
| BanII | GRGCYC | 1 cut(s) | 315 |
| BbsI | GAAGAC | 1 cut(s) | 254 |
| Bbv12I | GWGCWC | 1 cut(s) | 151 |
| BccI | CCATC | 2 cut(s) | 37, 297 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 128, 162 |
| BcoDI | GTCTC | 3 cut(s) | 60, 71, 187 |
| BcuI | ACTAGT | 1 cut(s) | 299 |
| BfaI | CTAG | 1 cut(s) | 300 |
| BmiI | GGNNCC | 1 cut(s) | 45 |
| BpiI | GAAGAC | 1 cut(s) | 254 |
| BsaBI | GATNNNNATC | 1 cut(s) | 12 |
| BsaI | GGTCTC | 1 cut(s) | 187 |
| Bse8I | GATNNNNATC | 1 cut(s) | 12 |
| BseGI | GGATG | 2 cut(s) | 10, 277 |
| BseJI | GATNNNNATC | 1 cut(s) | 12 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseRI | GAGGAG | 1 cut(s) | 78 |
| BsiHKAI | GWGCWC | 1 cut(s) | 151 |
| BsmAI | GTCTC | 3 cut(s) | 60, 71, 187 |
| Bso31I | GGTCTC | 1 cut(s) | 187 |
| Bsp1286I | GDGCHC | 2 cut(s) | 151, 315 |
| Bsp143I | GATC | 3 cut(s) | 13, 202, 224 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BspLI | GGNNCC | 1 cut(s) | 45 |
| BspPI | GGATC | 2 cut(s) | 8, 197 |
| BspQI | GCTCTTC | 1 cut(s) | 303 |
| BspTNI | GGTCTC | 1 cut(s) | 187 |
| BssMI | GATC | 3 cut(s) | 13, 202, 224 |
| Bst6I | CTCTTC | 1 cut(s) | 303 |
| BstDEI | CTNAG | 2 cut(s) | 75, 221 |
| BstF5I | GGATG | 2 cut(s) | 10, 277 |
| BstKTI | GATC | 3 cut(s) | 16, 205, 227 |
| BstMAI | GTCTC | 3 cut(s) | 60, 71, 187 |
| BstMBI | GATC | 3 cut(s) | 13, 202, 224 |
| BstV2I | GAAGAC | 1 cut(s) | 254 |
| BstX2I | RGATCY | 1 cut(s) | 13 |
| BstYI | RGATCY | 1 cut(s) | 13 |
| BtsCI | GGATG | 2 cut(s) | 10, 277 |
| CviAII | CATG | 1 cut(s) | 228 |
| CviJI | RGCY | 2 cut(s) | 178, 313 |
| CviKI_1 | RGCY | 2 cut(s) | 178, 313 |
| DdeI | CTNAG | 2 cut(s) | 75, 221 |
| DpnI | GATC | 3 cut(s) | 15, 204, 226 |
| DpnII | GATC | 3 cut(s) | 13, 202, 224 |
| Eam1104I | CTCTTC | 1 cut(s) | 303 |
| EarI | CTCTTC | 1 cut(s) | 303 |
| Eco24I | GRGCYC | 1 cut(s) | 315 |
| Eco31I | GGTCTC | 1 cut(s) | 187 |
| EcoT38I | GRGCYC | 1 cut(s) | 315 |
| FaeI | CATG | 1 cut(s) | 231 |
| FaiI | YATR | 5 cut(s) | 54, 99, 101, 210, 229 |
| FatI | CATG | 1 cut(s) | 227 |
| FokI | GGATG | 2 cut(s) | 17, 284 |
| FriOI | GRGCYC | 1 cut(s) | 315 |
| FspBI | CTAG | 1 cut(s) | 300 |
| Hin1II | CATG | 1 cut(s) | 231 |
| Hpy188I | TCNGA | 4 cut(s) | 22, 172, 217, 307 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 74 |
| Hpy99I | CGWCG | 1 cut(s) | 143 |
| HpyAV | CCTTC | 3 cut(s) | 27, 127, 137 |
| HpyCH4IV | ACGT | 1 cut(s) | 104 |
| HpyCH4V | TGCA | 1 cut(s) | 231 |
| HpyF3I | CTNAG | 2 cut(s) | 75, 221 |
| HpySE526I | ACGT | 1 cut(s) | 104 |
| Hsp92II | CATG | 1 cut(s) | 231 |
| Kzo9I | GATC | 3 cut(s) | 13, 202, 224 |
| LguI | GCTCTTC | 1 cut(s) | 303 |
| LpnPI | CCDG | 4 cut(s) | 51, 87, 192, 210 |
| MaeI | CTAG | 1 cut(s) | 300 |
| MaeII | ACGT | 1 cut(s) | 104 |
| MalI | GATC | 3 cut(s) | 15, 204, 226 |
| MboI | GATC | 3 cut(s) | 13, 202, 224 |
| MboII | GAAGA | 6 cut(s) | 23, 132, 135, 259, 290, 320 |
| MflI | RGATCY | 1 cut(s) | 13 |
| MhlI | GDGCHC | 2 cut(s) | 151, 315 |
| MnlI | CCTC | 3 cut(s) | 34, 56, 216 |
| MseI | TTAA | 2 cut(s) | 267, 318 |
| NdeII | GATC | 3 cut(s) | 13, 202, 224 |
| NlaIII | CATG | 1 cut(s) | 231 |
| NlaIV | GGNNCC | 1 cut(s) | 45 |
| PciSI | GCTCTTC | 1 cut(s) | 303 |
| PspN4I | GGNNCC | 1 cut(s) | 45 |
| PsuI | RGATCY | 1 cut(s) | 13 |
| SapI | GCTCTTC | 1 cut(s) | 303 |
| SaqAI | TTAA | 2 cut(s) | 267, 318 |
| Sau3AI | GATC | 3 cut(s) | 13, 202, 224 |
| SduI | GDGCHC | 2 cut(s) | 151, 315 |
| SetI | ASST | 3 cut(s) | 107, 148, 329 |
| SgeI | CNNG | 9 cut(s) | 50, 86, 123, 191, 196, 209, 240, 272, 312 |
| SpeI | ACTAGT | 1 cut(s) | 299 |
| SspI | AATATT | 2 cut(s) | 95, 129 |
| SspMI | CTAG | 1 cut(s) | 300 |
| TaiI | ACGT | 1 cut(s) | 107 |
| Tru1I | TTAA | 2 cut(s) | 267, 318 |
| Tru9I | TTAA | 2 cut(s) | 267, 318 |
| TspDTI | ATGAA | 4 cut(s) | 24, 69, 102, 291 |
| XspI | CTAG | 1 cut(s) | 300 |