snRNA-activating protein complex
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0108841 |
| rosa_laevigata | RLG00000020671 |
| rosa_multiflora | Rmu_sc0003830.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00003190 Rroxscaffold_1G00015540 |
| rosa_rugosa | Rorug02G0436900 Rorug05G0467200 |
| rosa_samantha | Rh2AG206800 Rh2AG498900 Rh2AG499100 Rh2BG217900 Rh2CG209900 Rh2CG485500 Rh2DG213100 Rh5AG431500 Rh5AG521000 Rh5BG447600 Rh5BG543000 Rh5CG469600 Rh5CG565800 Rh5DG460200 Rh5DG552800 Rh6CG050900 |
| rosa_wichuraiana | Rw5G040450 Rw5G048320 Rw6G002720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 174 |
| AciI | CCGC | 2 cut(s) | 5, 265 |
| AclWI | GGATC | 1 cut(s) | 404 |
| AcuI | CTGAAG | 2 cut(s) | 227, 328 |
| AdeI | CACNNNGTG | 1 cut(s) | 109 |
| AgsI | TTSAA | 2 cut(s) | 314, 366 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 131, 163 |
| AluBI | AGCT | 3 cut(s) | 77, 241, 332 |
| AluI | AGCT | 3 cut(s) | 77, 241, 332 |
| Alw26I | GTCTC | 1 cut(s) | 218 |
| AlwI | GGATC | 1 cut(s) | 404 |
| AspS9I | GGNCC | 2 cut(s) | 168, 194 |
| AsuHPI | GGTGA | 2 cut(s) | 146, 259 |
| AvaII | GGWCC | 2 cut(s) | 168, 194 |
| BauI | CACGAG | 1 cut(s) | 379 |
| BbsI | GAAGAC | 2 cut(s) | 120, 216 |
| BccI | CCATC | 1 cut(s) | 91 |
| BceAI | ACGGC | 1 cut(s) | 101 |
| BcoDI | GTCTC | 1 cut(s) | 218 |
| Bme18I | GGWCC | 2 cut(s) | 168, 194 |
| BmgT120I | GGNCC | 2 cut(s) | 168, 194 |
| BmiI | GGNNCC | 1 cut(s) | 169 |
| BpiI | GAAGAC | 2 cut(s) | 120, 216 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 134, 166, 181, 213 |
| BpmI | CTGGAG | 1 cut(s) | 354 |
| BsaI | GGTCTC | 1 cut(s) | 218 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 131, 161, 321, 351 |
| Bse1I | ACTGG | 1 cut(s) | 220 |
| Bse3DI | GCAATG | 1 cut(s) | 267 |
| BseMI | GCAATG | 1 cut(s) | 267 |
| BseMII | CTCAG | 2 cut(s) | 165, 393 |
| BseNI | ACTGG | 1 cut(s) | 220 |
| BseRI | GAGGAG | 3 cut(s) | 152, 155, 158 |
| BslFI | GGGAC | 1 cut(s) | 181 |
| BsmAI | GTCTC | 1 cut(s) | 218 |
| BsmFI | GGGAC | 1 cut(s) | 181 |
| Bso31I | GGTCTC | 1 cut(s) | 218 |
| Bsp143I | GATC | 2 cut(s) | 45, 396 |
| BspACI | CCGC | 2 cut(s) | 5, 265 |
| BspCNI | CTCAG | 2 cut(s) | 164, 394 |
| BspLI | GGNNCC | 1 cut(s) | 169 |
| BspPI | GGATC | 1 cut(s) | 404 |
| BspTNI | GGTCTC | 1 cut(s) | 218 |
| BsrDI | GCAATG | 1 cut(s) | 267 |
| BsrI | ACTGG | 1 cut(s) | 220 |
| BssMI | GATC | 2 cut(s) | 45, 396 |
| BssSI | CACGAG | 1 cut(s) | 379 |
| Bst2BI | CACGAG | 1 cut(s) | 379 |
| Bst4CI | ACNGT | 3 cut(s) | 14, 61, 172 |
| Bst6I | CTCTTC | 1 cut(s) | 221 |
| BstDEI | CTNAG | 3 cut(s) | 89, 151, 402 |
| BstKTI | GATC | 2 cut(s) | 48, 399 |
| BstMAI | GTCTC | 1 cut(s) | 218 |
| BstMBI | GATC | 2 cut(s) | 45, 396 |
| BstV2I | GAAGAC | 2 cut(s) | 120, 216 |
| BtgZI | GCGATG | 1 cut(s) | 337 |
| BtsIMutI | CAGTG | 1 cut(s) | 399 |
| Cfr13I | GGNCC | 2 cut(s) | 168, 194 |
| CseI | GACGC | 1 cut(s) | 125 |
| DdeI | CTNAG | 3 cut(s) | 89, 151, 402 |
| DpnI | GATC | 2 cut(s) | 47, 398 |
| DpnII | GATC | 2 cut(s) | 45, 396 |
| DraIII | CACNNNGTG | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 1 cut(s) | 221 |
| EarI | CTCTTC | 1 cut(s) | 221 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco31I | GGTCTC | 1 cut(s) | 218 |
| Eco47I | GGWCC | 2 cut(s) | 168, 194 |
| Eco57I | CTGAAG | 2 cut(s) | 227, 328 |
| FaiI | YATR | 5 cut(s) | 108, 188, 394, 419, 433 |
| FaqI | GGGAC | 1 cut(s) | 181 |
| FblI | GTMKAC | 1 cut(s) | 174 |
| GsuI | CTGGAG | 1 cut(s) | 354 |
| HgaI | GACGC | 1 cut(s) | 125 |
| HphI | GGTGA | 2 cut(s) | 146, 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 2 cut(s) | 282, 412 |
| Hpy188III | TCNNGA | 1 cut(s) | 65 |
| Hpy8I | GTNNAC | 1 cut(s) | 175 |
| HpyCH4III | ACNGT | 3 cut(s) | 14, 61, 172 |
| HpyCH4V | TGCA | 2 cut(s) | 72, 384 |
| HpyF3I | CTNAG | 3 cut(s) | 89, 151, 402 |
| Kzo9I | GATC | 2 cut(s) | 45, 396 |
| LmnI | GCTCC | 1 cut(s) | 329 |
| LpnPI | CCDG | 6 cut(s) | 230, 233, 258, 306, 318, 331 |
| MalI | GATC | 2 cut(s) | 47, 398 |
| MboI | GATC | 2 cut(s) | 45, 396 |
| MboII | GAAGA | 4 cut(s) | 42, 125, 208, 216 |
| MluCI | AATT | 2 cut(s) | 54, 291 |
| MnlI | CCTC | 7 cut(s) | 130, 133, 136, 207, 363, 397, 406 |
| MseI | TTAA | 1 cut(s) | 17 |
| NdeII | GATC | 2 cut(s) | 45, 396 |
| NlaIV | GGNNCC | 1 cut(s) | 169 |
| NmeAIII | GCCGAG | 1 cut(s) | 47 |
| PspN4I | GGNNCC | 1 cut(s) | 169 |
| PspPI | GGNCC | 2 cut(s) | 168, 194 |
| SaqAI | TTAA | 1 cut(s) | 17 |
| Sau3AI | GATC | 2 cut(s) | 45, 396 |
| Sau96I | GGNCC | 2 cut(s) | 168, 194 |
| SetI | ASST | 5 cut(s) | 79, 243, 249, 334, 350 |
| SinI | GGWCC | 2 cut(s) | 168, 194 |
| Sse9I | AATT | 2 cut(s) | 54, 291 |
| SsiI | CCGC | 2 cut(s) | 5, 265 |
| TaaI | ACNGT | 3 cut(s) | 14, 61, 172 |
| TaqI | TCGA | 2 cut(s) | 48, 66 |
| TaqII | GACCGA | 1 cut(s) | 200 |
| TasI | AATT | 2 cut(s) | 54, 291 |
| Tru1I | TTAA | 1 cut(s) | 17 |
| Tru9I | TTAA | 1 cut(s) | 17 |
| TscAI | CASTG | 1 cut(s) | 406 |
| TspDTI | ATGAA | 1 cut(s) | 340 |
| TspRI | CASTG | 1 cut(s) | 406 |
| VpaK11BI | GGWCC | 2 cut(s) | 168, 194 |
| XmiI | GTMKAC | 1 cut(s) | 174 |