Rorug02G0436900

snRNA-activating protein complex

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000710
Physical Location & Seq
Reverse (-)
55800312 .. 55808254
7943 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0436900.1

Sequence Viewer

Length: 1875 bp
ATGAATATGCAACCAGCTGTCCATTCTAAATCATCTGCTAATGGTTTTGGTCGTCGAAGAAGTGAAAGAGAAGGGGGTGCTAGGGTCGAGAATAAGTCGCAGTCGGGGAAGGCAAACCATAGCAAATCAAGCAGCAAAGCTGGTAACTATGAGAGTCCTTCGCGTGATCGCGTAGTATTTTTAACTACATGTCTTATTGGACATCATGTGGAGGTTCAGGTGAAAAATGGATCCATATACACCGGAATATTTCATGCAACGAATGCTGATAAAGATTTTGGAATCATATTGAAAATGGCTCGCATGATAAAGGATGGTTCCTTACGAGGGCAGAAGTCTATGTCAGATTCAGTTAGCAAGGCTCCTTTAAAGACATTAATTATACCTTCCAAAGAACTTGTGCAAGTGATAGCAAAGGATGTCTCAATAAGTAGAGAGGGATTGTTGAGTGAGGTCCAGCATGAAAAACATCAGGAGCTTATGCTAGATTCCTCCATATCACAATCCCGCCGTGGTGAGATGGAGAGAGAGCTGGAGCCGTGGATCCCTGATGAAGATGATCCACGTCCTGAGTTGGAAAATATATTTGATGGACATTGGAATAGGAACTGGGATCAATTTGAAACAAATGAAGCATTATTTGGGGTAAAAAGCACATTTGATGAGGAACTTTACACAACAAAGCTTGAGAAAGGTCCTAAAATGAGAGAGTTGGAAAGGGAAGCTTTACGAATAGCAAGAGAAATTGAGGGTGAGGATACCCAGGATCTGCATGCAGCAGAGGAAAGAGGCATGCAGCCGTATGAAAATTTTGATATTGATGAGGAGACCAGATACTCCTCTGTTTATCGGGGTGAGGTAGTTGATGATAGTGGATACGATGAAGATGAGGATATTTTATTGGATTCACGTAATACTGAGACCTTTGGAGGTTCTCCTGGTTCTGAGCAAAAGAGTTCAATCGATTGGACCAGTGGAAAAGGCAACCATGGAGTTCAGGTGCCTTCAAGCTCTTCATCTGTGGATTACACACACTATTCTGAATCAAATGTCGCCCCAGAGTTATATCGTTCTGGATCTTATGACCATGCTAGGCAGCTGGCATCAGAACCACCTAATAAAAGTTTTGCCAGTACAGCCGGTGAAAGCAGTGAACATGTAGATACCGACAGTGCTACTGACTCTGTAGAAAAGCATATGCTGGCCGGGGACAGTCAAACGTCAAAACCAGATGATTCAGAGAAGACAAAAAATGCATTTGATACAGATGTGCTATCCTCGAATGCCACCTCTTATGCTCCACCTCCTGTTTCATCAAAAGGTCAGGAGAAGATGAGTTCTAGTGAACTGGAGGGTCCAGTGACGGGTAAAGCACATGCACAGACACACACAGTAAATACTCATGGACGACCTGGTAGTTCTGCATCTTCCAATTCAGAATGTGCAGGTGCTGTGTCTGCTTCTGGTGGCCGTGGTTTATCACCAAGCTCATCGCTTGGTTCCTTGTCCTCTGAAAAGTCGACATTGAATCCCAATGCTAAGGAATTCAAATTCAACCCACATGCAAAGAGTTTCGTTCCATCTCAAACCCCTGTTAGGCCTCCTTCCCCAGTGTCGGATGGTTCCTTCTATTATCCAACTAACATGCCTGCTGTACCACATATGCCTGGCATGCCTGTTGGCATTGGAGGACACTCTTTTGCACACCAACCTGTTATGTTTAATCCACAGGTGGGGCAGATGCAAGCACCCCAAGCATATTATCATCCCAATGGGCCTCAGTATGGACAACAGATGCTTCTTGGACACCCTAGACAAGTTGTATACATGCCGAACTACCAACCTGAAATGCCATATAAAGGACGAGATTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000578 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006366 GO:0006725 GO:0006807 GO:0006810 GO:0007049 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009301 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009888 GO:0009914 GO:0009926 GO:0009933 GO:0009942 GO:0009945 GO:0009956 GO:0009987 GO:0010014 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010154 GO:0010311 GO:0010467 GO:0010817 GO:0016070 GO:0016073 GO:0018130 GO:0019438 GO:0022402 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0032774 GO:0032870 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043696 GO:0043697 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048364 GO:0048507 GO:0048527 GO:0048528 GO:0048532 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060184 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071365 GO:0071368 GO:0071495 GO:0071704 GO:0090304 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0097659 GO:0098781 GO:0099402 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-SNAP50_C

Protein Analysis

624

Amino Acids

68.51

Weight (kDa)

5.44

Isoelectric Point (pI)

54.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SM-ATX PF14438 55 - 139 1.4e-27 Ataxin 2 SM domain
LsmAD PF06741 214 - 284 1.1e-24 LsmAD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1436
Acc36I ACCTGC 1 cut(s) 1436
AccB1I GGYRCC 1 cut(s) 1000
AccI GTMKAC 2 cut(s) 1520, 1824
AccII CGCG 2 cut(s) 163, 171
AciI CCGC 1 cut(s) 508
AclWI GGATC 8 cut(s) 225, 238, 538, 551, 554, 621, 774, 1084
AcoI YGGCCR 2 cut(s) 1203, 1468
AcsI RAATTY 3 cut(s) 808, 1544, 1550
AfaI GTAC 2 cut(s) 1135, 1656
AfiI CCNNNNNNNGG 7 cut(s) 327, 1364, 1596, 1615, 1733, 1784, 1859
AflIII ACRYGT 2 cut(s) 188, 1156
AgsI TTSAA 7 cut(s) 292, 623, 960, 1008, 1528, 1549, 1555
AjiI CACGTC 1 cut(s) 566
AjnI CCWGG 4 cut(s) 762, 937, 1411, 1666
AjuI GAANNNNNNNTTGG 2 cut(s) 624, 656
AluBI AGCT 9 cut(s) 17, 140, 478, 532, 685, 725, 1011, 1099, 1488
AluI AGCT 9 cut(s) 17, 140, 478, 532, 685, 725, 1011, 1099, 1488
Alw26I GTCTC 3 cut(s) 427, 821, 914
AlwI GGATC 8 cut(s) 225, 238, 538, 551, 554, 621, 774, 1084
AlwNI CAGNNNCTG 2 cut(s) 769, 1451
AoxI GGCC 4 cut(s) 1203, 1468, 1598, 1775
ApeKI GCWGC 4 cut(s) 132, 776, 796, 1096
ApoI RAATTY 3 cut(s) 808, 1544, 1550
AseI ATTAAT 1 cut(s) 377
AspS9I GGNCC 5 cut(s) 454, 695, 969, 1355, 1775
AsuC2I CCSGG 1 cut(s) 1207
AsuHPI GGTGA 6 cut(s) 232, 527, 764, 866, 1154, 1473
AvaII GGWCC 4 cut(s) 454, 695, 969, 1355
BaeI ACNNNNGTAYC 2 cut(s) 1254, 1287
BamHI GGATCC 2 cut(s) 230, 543
BanI GGYRCC 1 cut(s) 1000
BbsI GAAGAC 1 cut(s) 1250
BbvI GCAGC 4 cut(s) 144, 788, 808, 1108
BccI CCATC 5 cut(s) 308, 514, 584, 1588, 1613
BceAI ACGGC 4 cut(s) 495, 523, 784, 1455
BciT130I CCWGG 4 cut(s) 764, 939, 1413, 1668
BciVI GTATCC 2 cut(s) 751, 869
BcnI CCSGG 1 cut(s) 1207
BcoDI GTCTC 3 cut(s) 427, 821, 914
BfaI CTAG 5 cut(s) 81, 485, 1092, 1341, 1812
BfmI CTRYAG 1 cut(s) 1185
BfuAI ACCTGC 1 cut(s) 1436
BfuI GTATCC 2 cut(s) 751, 869
BisI GCNGC 4 cut(s) 133, 777, 797, 1097
BlsI GCNGC 4 cut(s) 134, 778, 798, 1098
Bme1390I CCNGG 5 cut(s) 764, 939, 1207, 1413, 1668
Bme18I GGWCC 4 cut(s) 454, 695, 969, 1355
BmgBI CACGTC 1 cut(s) 566
BmgT120I GGNCC 5 cut(s) 454, 695, 969, 1355, 1775
BmiI GGNNCC 9 cut(s) 232, 319, 363, 537, 545, 1002, 1356, 1501, 1624
BmrFI CCNGG 5 cut(s) 764, 939, 1207, 1413, 1668
BmrI ACTGGG 2 cut(s) 619, 1604
BmsI GCATC 4 cut(s) 1112, 1433, 1731, 1785
BmuI ACTGGG 2 cut(s) 619, 1604
BpiI GAAGAC 1 cut(s) 1250
BpmI CTGGAG 2 cut(s) 554, 1370
Bpu10I CCTNAGC 1 cut(s) 1539
BpuEI CTTGAG 1 cut(s) 707
BpuMI CCSGG 1 cut(s) 1207
Bsa29I ATCGAT 1 cut(s) 963
BsaAI YACGTR 1 cut(s) 911
BsaI GGTCTC 2 cut(s) 821, 914
BsaJI CCNNGG 6 cut(s) 511, 539, 762, 988, 1206, 1471
BsaWI WCCGGW 1 cut(s) 242
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bsc4I CCNNNNNNNGG 7 cut(s) 327, 1364, 1596, 1615, 1733, 1784, 1859
Bse118I RCCGGY 1 cut(s) 1139
Bse1I ACTGG 6 cut(s) 614, 972, 1131, 1353, 1358, 1610
BseBI CCWGG 4 cut(s) 764, 939, 1413, 1668
BseCI ATCGAT 1 cut(s) 963
BseDI CCNNGG 6 cut(s) 511, 539, 762, 988, 1206, 1471
BseGI GGATG 4 cut(s) 319, 424, 1624, 1765
BseLI CCNNNNNNNGG 7 cut(s) 327, 1364, 1596, 1615, 1733, 1784, 1859
BseMII CTCAG 4 cut(s) 561, 909, 936, 1793
BseNI ACTGG 6 cut(s) 614, 972, 1131, 1353, 1358, 1610
BseRI GAGGAG 2 cut(s) 829, 839
BseXI GCAGC 4 cut(s) 144, 788, 808, 1108
BsgI GTGCAG 1 cut(s) 1464
Bsh1236I CGCG 2 cut(s) 163, 171
BshFI GGCC 4 cut(s) 1205, 1470, 1600, 1777
BshNI GGYRCC 1 cut(s) 1000
BshVI ATCGAT 1 cut(s) 963
BsiSI CCGG 3 cut(s) 243, 1140, 1206
BslFI GGGAC 1 cut(s) 1223
BslI CCNNNNNNNGG 7 cut(s) 327, 1364, 1596, 1615, 1733, 1784, 1859
BsmAI GTCTC 3 cut(s) 427, 821, 914
BsmFI GGGAC 1 cut(s) 1223
BsmI GAATGC 2 cut(s) 268, 1288
BsnI GGCC 4 cut(s) 1205, 1470, 1600, 1777
Bso31I GGTCTC 2 cut(s) 821, 914
Bsp143I GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
Bsp19I CCATGG 1 cut(s) 988
BspACI CCGC 1 cut(s) 508
BspANI GGCC 4 cut(s) 1205, 1470, 1600, 1777
BspCNI CTCAG 4 cut(s) 562, 910, 937, 1792
BspDI ATCGAT 1 cut(s) 963
BspFNI CGCG 2 cut(s) 163, 171
BspLI GGNNCC 9 cut(s) 232, 319, 363, 537, 545, 1002, 1356, 1501, 1624
BspMI ACCTGC 1 cut(s) 1436
BspPI GGATC 8 cut(s) 225, 238, 538, 551, 554, 621, 774, 1084
BspQI GCTCTTC 1 cut(s) 1018
BspT107I GGYRCC 1 cut(s) 1000
BspTNI GGTCTC 2 cut(s) 821, 914
BsrFI RCCGGY 1 cut(s) 1139
BsrI ACTGG 6 cut(s) 614, 972, 1131, 1353, 1358, 1610
BssAI RCCGGY 1 cut(s) 1139
BssECI CCNNGG 6 cut(s) 511, 539, 762, 988, 1206, 1471
BssMI GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
BssNAI GTATAC 1 cut(s) 1825
BssT1I CCWWGG 1 cut(s) 988
Bst1107I GTATAC 1 cut(s) 1825
Bst2UI CCWGG 4 cut(s) 764, 939, 1413, 1668
Bst4CI ACNGT 3 cut(s) 1172, 1214, 1393
Bst6I CTCTTC 1 cut(s) 1018
BstAPI GCANNNNNTGC 1 cut(s) 263
BstBAI YACGTR 1 cut(s) 911
BstC8I GCNNGC 8 cut(s) 301, 774, 794, 1101, 1203, 1650, 1673, 1746
BstDEI CTNAG 5 cut(s) 570, 918, 945, 1539, 1779
BstDSI CCRYGG 4 cut(s) 511, 539, 988, 1471
BstF5I GGATG 4 cut(s) 319, 424, 1624, 1765
BstFNI CGCG 2 cut(s) 163, 171
BstKTI GATC 7 cut(s) 169, 233, 546, 562, 616, 769, 1079
BstMAI GTCTC 3 cut(s) 427, 821, 914
BstMBI GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
BstMWI GCNNNNNNNGC 6 cut(s) 129, 263, 1136, 1457, 1672, 1754
BstNI CCWGG 4 cut(s) 764, 939, 1413, 1668
BstNSI RCATGY 9 cut(s) 192, 776, 796, 1160, 1379, 1565, 1648, 1675, 1831
BstSCI CCNGG 5 cut(s) 762, 937, 1205, 1411, 1666
BstSFI CTRYAG 1 cut(s) 1185
BstUI CGCG 2 cut(s) 163, 171
BstV1I GCAGC 4 cut(s) 144, 788, 808, 1108
BstV2I GAAGAC 1 cut(s) 1250
BstX2I RGATCY 4 cut(s) 230, 543, 766, 1076
BstYI RGATCY 4 cut(s) 230, 543, 766, 1076
BstZ17I GTATAC 1 cut(s) 1825
Bsu15I ATCGAT 1 cut(s) 963
BsuI GTATCC 2 cut(s) 751, 869
BsuRI GGCC 4 cut(s) 1205, 1470, 1600, 1777
BsuTUI ATCGAT 1 cut(s) 963
BtgI CCRYGG 4 cut(s) 511, 539, 988, 1471
BtgZI GCGATG 1 cut(s) 1476
BtrI CACGTC 1 cut(s) 566
BtsCI GGATG 4 cut(s) 319, 424, 1624, 1765
BtsI GCAGTG 1 cut(s) 1156
BtsIMutI CAGTG 5 cut(s) 979, 1156, 1177, 1365, 1617
BveI ACCTGC 1 cut(s) 1436
Cac8I GCNNGC 8 cut(s) 301, 774, 794, 1101, 1203, 1650, 1673, 1746
CaiI CAGNNNCTG 2 cut(s) 769, 1451
Cfr10I RCCGGY 1 cut(s) 1139
Cfr13I GGNCC 5 cut(s) 454, 695, 969, 1355, 1775
ClaI ATCGAT 1 cut(s) 963
CsiI ACCWGGT 1 cut(s) 1411
Csp6I GTAC 2 cut(s) 1134, 1655
CviQI GTAC 2 cut(s) 1134, 1655
DdeI CTNAG 5 cut(s) 570, 918, 945, 1539, 1779
DpnI GATC 7 cut(s) 168, 232, 545, 561, 615, 768, 1078
DpnII GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
DraI TTTAAA 1 cut(s) 369
EaeI YGGCCR 2 cut(s) 1203, 1468
Eam1104I CTCTTC 1 cut(s) 1018
EarI CTCTTC 1 cut(s) 1018
Eco130I CCWWGG 1 cut(s) 988
Eco147I AGGCCT 1 cut(s) 1600
Eco31I GGTCTC 2 cut(s) 821, 914
Eco47I GGWCC 4 cut(s) 454, 695, 969, 1355
EcoO109I RGGNCCY 1 cut(s) 695
EcoRI GAATTC 1 cut(s) 1544
EcoRII CCWGG 4 cut(s) 762, 937, 1411, 1666
EcoT14I CCWWGG 1 cut(s) 988
EcoT22I ATGCAT 1 cut(s) 1258
ErhI CCWWGG 1 cut(s) 988
FalI AAGNNNNNCTT 2 cut(s) 709, 741
FaqI GGGAC 1 cut(s) 1223
FauI CCCGC 1 cut(s) 515
FauNDI CATATG 2 cut(s) 1197, 1662
FblI GTMKAC 2 cut(s) 1520, 1824
Fnu4HI GCNGC 4 cut(s) 133, 777, 797, 1097
FokI GGATG 4 cut(s) 326, 431, 1631, 1752
Fsp4HI GCNGC 4 cut(s) 133, 777, 797, 1097
FspBI CTAG 5 cut(s) 81, 485, 1092, 1341, 1812
GluI GCNGC 4 cut(s) 133, 777, 797, 1097
GsuI CTGGAG 2 cut(s) 554, 1370
HaeIII GGCC 4 cut(s) 1205, 1470, 1600, 1777
HapII CCGG 3 cut(s) 243, 1140, 1206
HincII GTYRAC 1 cut(s) 1521
HindII GTYRAC 1 cut(s) 1521
HindIII AAGCTT 2 cut(s) 683, 723
HinfI GANTC 9 cut(s) 154, 282, 347, 488, 905, 1043, 1181, 1235, 1528
HpaII CCGG 3 cut(s) 243, 1140, 1206
HphI GGTGA 6 cut(s) 232, 527, 764, 866, 1154, 1473
Hpy166II GTNNAC 4 cut(s) 1154, 1346, 1521, 1825
Hpy188I TCNGA 8 cut(s) 346, 946, 1042, 1108, 1240, 1438, 1513, 1618
Hpy188III TCNNGA 5 cut(s) 88, 473, 569, 1074, 1325
Hpy8I GTNNAC 4 cut(s) 1154, 1346, 1521, 1825
Hpy99I CGWCG 1 cut(s) 57
HpyAV CCTTC 7 cut(s) 65, 103, 168, 396, 1014, 1614, 1636
HpyCH4III ACNGT 3 cut(s) 1172, 1214, 1393
HpyCH4IV ACGT 3 cut(s) 565, 910, 1220
HpyF10VI GCNNNNNNNGC 6 cut(s) 129, 263, 1136, 1457, 1672, 1754
HpyF3I CTNAG 5 cut(s) 570, 918, 945, 1539, 1779
HpySE526I ACGT 3 cut(s) 565, 910, 1220
Kzo9I GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
LguI GCTCTTC 1 cut(s) 1018
LmnI GCTCC 4 cut(s) 367, 475, 535, 1303
Lsp1109I GCAGC 4 cut(s) 144, 788, 808, 1108
LweI GCATC 4 cut(s) 1112, 1433, 1731, 1785
MabI ACCWGGT 1 cut(s) 1411
MaeI CTAG 5 cut(s) 81, 485, 1092, 1341, 1812
MaeII ACGT 3 cut(s) 565, 910, 1220
MaeIII GTNAC 2 cut(s) 143, 1360
MalI GATC 7 cut(s) 168, 232, 545, 561, 615, 768, 1078
MboI GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
MboII GAAGA 7 cut(s) 69, 566, 896, 1005, 1255, 1342, 1419
MflI RGATCY 4 cut(s) 230, 543, 766, 1076
MluCI AATT 7 cut(s) 378, 617, 744, 808, 1432, 1544, 1550
MlyI GAGTC 2 cut(s) 163, 1175
MmeI TCCRAC 4 cut(s) 555, 693, 1596, 1661
Mph1103I ATGCAT 1 cut(s) 1258
MseI TTAA 5 cut(s) 182, 368, 377, 1722, 1873
MslI CAYNNNNRTG 1 cut(s) 1770
MspA1I CMGCKG 2 cut(s) 17, 1099
MspI CCGG 3 cut(s) 243, 1140, 1206
MspR9I CCNGG 5 cut(s) 764, 939, 1207, 1413, 1668
Mva1269I GAATGC 2 cut(s) 268, 1288
MvaI CCWGG 4 cut(s) 764, 939, 1413, 1668
MvnI CGCG 2 cut(s) 163, 171
MwoI GCNNNNNNNGC 6 cut(s) 129, 263, 1136, 1457, 1672, 1754
NciI CCSGG 1 cut(s) 1207
NcoI CCATGG 1 cut(s) 988
NdeI CATATG 2 cut(s) 1197, 1662
NdeII GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
NlaIV GGNNCC 9 cut(s) 232, 319, 363, 537, 545, 1002, 1356, 1501, 1624
NmuCI GTSAC 1 cut(s) 1360
NsiI ATGCAT 1 cut(s) 1258
NspI RCATGY 9 cut(s) 192, 776, 796, 1160, 1379, 1565, 1648, 1675, 1831
PaeI GCATGC 3 cut(s) 776, 796, 1675
PaqCI CACCTGC 1 cut(s) 1436
PceI AGGCCT 1 cut(s) 1600
PciI ACATGT 2 cut(s) 188, 1156
PciSI GCTCTTC 1 cut(s) 1018
PctI GAATGC 2 cut(s) 268, 1288
PfeI GAWTC 7 cut(s) 282, 347, 488, 905, 1043, 1235, 1528
PkrI GCNGC 4 cut(s) 134, 778, 798, 1098
PleI GAGTC 2 cut(s) 162, 1175
PpsI GAGTC 2 cut(s) 162, 1175
Ppu21I YACGTR 1 cut(s) 911
PpuMI RGGWCCY 1 cut(s) 695
PscI ACATGT 2 cut(s) 188, 1156
PshBI ATTAAT 1 cut(s) 377
Psp5II RGGWCCY 1 cut(s) 695
Psp6I CCWGG 4 cut(s) 762, 937, 1411, 1666
PspGI CCWGG 4 cut(s) 762, 937, 1411, 1666
PspN4I GGNNCC 9 cut(s) 232, 319, 363, 537, 545, 1002, 1356, 1501, 1624
PspPI GGNCC 5 cut(s) 454, 695, 969, 1355, 1775
PspPPI RGGWCCY 1 cut(s) 695
PstNI CAGNNNCTG 2 cut(s) 769, 1451
PsuI RGATCY 4 cut(s) 230, 543, 766, 1076
PvuII CAGCTG 2 cut(s) 17, 1099
RsaI GTAC 2 cut(s) 1135, 1656
RsaNI GTAC 2 cut(s) 1134, 1655
RseI CAYNNNNRTG 1 cut(s) 1770
SalI GTCGAC 1 cut(s) 1519
SapI GCTCTTC 1 cut(s) 1018
SaqAI TTAA 5 cut(s) 182, 368, 377, 1722, 1873
SatI GCNGC 4 cut(s) 133, 777, 797, 1097
Sau3AI GATC 7 cut(s) 166, 230, 543, 559, 613, 766, 1076
Sau96I GGNCC 5 cut(s) 454, 695, 969, 1355, 1775
SchI GAGTC 2 cut(s) 163, 1175
ScrFI CCNGG 5 cut(s) 764, 939, 1207, 1413, 1668
SexAI ACCWGGT 1 cut(s) 1411
SfaNI GCATC 4 cut(s) 1112, 1433, 1731, 1785
SfcI CTRYAG 1 cut(s) 1185
SinI GGWCC 4 cut(s) 454, 695, 969, 1355
SmiMI CAYNNNNRTG 1 cut(s) 1770
SmlI CTYRAG 1 cut(s) 686
SmoI CTYRAG 1 cut(s) 686
SphI GCATGC 3 cut(s) 776, 796, 1675
Sse9I AATT 7 cut(s) 378, 617, 744, 808, 1432, 1544, 1550
SseBI AGGCCT 1 cut(s) 1600
SsiI CCGC 1 cut(s) 508
SspI AATATT 1 cut(s) 249
SspMI CTAG 5 cut(s) 81, 485, 1092, 1341, 1812
StuI AGGCCT 1 cut(s) 1600
StyD4I CCNGG 5 cut(s) 762, 937, 1205, 1411, 1666
StyI CCWWGG 1 cut(s) 988
TaaI ACNGT 3 cut(s) 1172, 1214, 1393
TaiI ACGT 3 cut(s) 568, 913, 1223
TaqI TCGA 5 cut(s) 55, 87, 963, 1280, 1520
TasI AATT 7 cut(s) 378, 617, 744, 808, 1432, 1544, 1550
TatI WGTACW 1 cut(s) 1133
TfiI GAWTC 7 cut(s) 282, 347, 488, 905, 1043, 1235, 1528
Tru1I TTAA 5 cut(s) 182, 368, 377, 1722, 1873
Tru9I TTAA 5 cut(s) 182, 368, 377, 1722, 1873
TscAI CASTG 5 cut(s) 979, 1156, 1177, 1365, 1617
TseFI GTSAC 1 cut(s) 1360
TseI GCWGC 4 cut(s) 132, 776, 796, 1096
Tsp45I GTSAC 1 cut(s) 1360
TspDTI ATGAA 9 cut(s) 17, 242, 477, 567, 645, 819, 897, 1005, 1302
TspRI CASTG 5 cut(s) 979, 1156, 1177, 1365, 1617
VpaK11BI GGWCC 4 cut(s) 454, 695, 969, 1355
VspI ATTAAT 1 cut(s) 377
XapI RAATTY 3 cut(s) 808, 1544, 1550
XceI RCATGY 9 cut(s) 192, 776, 796, 1160, 1379, 1565, 1648, 1675, 1831
XmiI GTMKAC 2 cut(s) 1520, 1824
XspI CTAG 5 cut(s) 81, 485, 1092, 1341, 1812
Zsp2I ATGCAT 1 cut(s) 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.