Rorug05G0417900

Reverse transcriptase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000710
Physical Location & Seq
Reverse (-)
58087322 .. 58095324
8003 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0417900.1

Sequence Viewer

Length: 1803 bp
ATGACCTCCGCGTCGAGCTCCGGCGACGAAACCTCCGACCCGAAGCCCAACCCGATTACAAAGCCCCCGGAGGACCAATTGGCCGCCCTCGCGTTATCCGAGACCGATAGCCAAGCAAACGGCGTCGCATATGAATCGCCGCGCGGGAACAATCACAATGAGATCGAGAACGAAGAGGACGTGGCGGCGCTGACCAATTCGGCTCCGCCTGCTTCGGCTGAGGTGGTGGAATCGAGCGGTGGTGGTGGTATTCTGTGGGCGAGGAGCAATTCGGAGCTGGAGGCCGACGGGGCGGAGAGCCCTAGCAGCAGCGGCTATGCCGGCGGCAGAGGGAGTAGTAGTGCCGGTAGTGATGGTTCCGGGATCGATGAGATTGCGGAAGGTAGTGATGTTGAGGTTGTTGACGGTGTTTCGGATTCACAAGCGCCGTGGGTGCCCGGAAAACGGCATGTTGATGAGGATGATGCTTCCATATCATGGAGAAAAAGGAAGAAGCACTTTTTCATACTAAGTAACTCTGGCAAACCAATATATTCCAGACATGGAGATGAACACAAACTAGCAGGATTTTCAGCAACATTACAAGCCATAATTTCCTTTGTTGAGAATGGTGGAGATCGTGTCAAATTGGTTAGGGCTGGGAAGCATCAGGTGGTTTTTCTTGTCAAGGGACCAATTTACCTGGTATGCATCAGCTGCACAGAAGAGCCTTATGAGTCTTTAAGAATGCAATTGGAACTTATATACGGTCAGATGCTACTTATTCTTACGAAGTCAGTAAATAGATGTTTTGAGAAGAATCCGAAGTTTGATATGACACCTTTGCTGGGAGGAACAGATATTGTCTTCTCTTCCCTCATCCATTCTTTCAGTTGGAATCCTGCCACATTTCTACATGCATATACTTGTCTTCCCCTTGCTTATGCGACAAGGCAAGCTGCAGGTGCCATATTGCAAGATGTTGCTGATTCAGGTGTTCTCTTTGCAATATTGATGTGCAAACACAAGGTTATCAGTCTTGTTGGTGCTCAGAAAGCGTCTCTTCATCCTGATGACATGCTATTGTTATCCAACTTTGTTATGGCATCAGAATCATTTAGGACATCTGAATCTTTCTCACCAATTTGCTTGCCAAGATATAATGCCATGGCATTTTTGTATGCTTATGTCCATTTTTTCGATGCTGACACATACTTGATGTTGCTTACTACTAGTTCAGAAGCCTTCTATCATCTCAAAGATTGCAGGATTCGTATTGAGATGGTCCTTCTGAAGTCGAGTGTCCTCAGTGAGATTCAGAGATCCATGCTAGATGGTGGGATGCGTGTTGAGGAGTTGCCTCTTGATCCTTTACCTCGATCTGGATCTTTTTCTCCTCATTTGAATCAACACACACTTCCAACAGATTCTCCCGACAGGTTCAGGGAACCATATGATGGCGTAGGTGGCCCTGCTGGACTCTGGCATTTTGTATATCGTAGTATCTTTTTGGATCAATACGTATCTTCTGAGTTCTCAGCACCAATAAATAGTCCTCGTCAGCAGAAAAGATTATATAGAGCTTACCAGAAGCTTTACGCTTCCATGCATGAAAGAGGAATTGGGCCCCACAAAACCCAGTTTAGAAGAGATGAGAATTATGTTCTACTCTGCTGGGTCACCCAGGATTTTGAGCTTTATGCAGCATTTGATCCACTTGCAGACAAGGCATTGGCGATAAAAACTTGCAACCGTGTTTGCCAGTGGGTAAAAGATGTGGAAAACGAGATTTTTTTGCTGGGTGCAAGCCCCTTTTCATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3

Protein Analysis

600

Amino Acids

66.18

Weight (kDa)

5.34

Isoelectric Point (pI)

47.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fuz_longin_1 PF19036 165 - 285 5.6e-30 First Longin domain of FUZ, MON1 and HPS1
Fuz_longin_2 PF19037 325 - 418 1.7e-21 Second Longin domain of FUZ, MON1 and HPS1
Fuz_longin_3 PF19038 486 - 586 8.3e-21 Third Longin domain of FUZ, MON1 and HPS1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 932
AasI GACNNNNNNGTC 1 cut(s) 10
Acc36I ACCTGC 1 cut(s) 932
AccB1I GGYRCC 2 cut(s) 433, 944
AccB7I CCANNNNNTGG 2 cut(s) 477, 1436
AccBSI CCGCTC 1 cut(s) 237
AccII CGCG 4 cut(s) 11, 92, 142, 144
AclWI GGATC 6 cut(s) 371, 1296, 1340, 1372, 1500, 1685
AcoI YGGCCR 1 cut(s) 81
AcuI CTGAAG 1 cut(s) 1292
AcyI GRCGYC 1 cut(s) 123
AfiI CCNNNNNNNGG 6 cut(s) 444, 477, 827, 1361, 1436, 1797
AgsI TTSAA 1 cut(s) 1384
AhlI ACTAGT 1 cut(s) 1211
AjiI CACGTC 1 cut(s) 181
AjnI CCWGG 2 cut(s) 681, 1662
AjuI GAANNNNNNNTTGG 2 cut(s) 1584, 1616
AluBI AGCT 7 cut(s) 18, 277, 696, 938, 1562, 1573, 1675
AluI AGCT 7 cut(s) 18, 277, 696, 938, 1562, 1573, 1675
Alw21I GWGCWC 2 cut(s) 20, 1030
Alw26I GTCTC 2 cut(s) 95, 1044
AlwI GGATC 6 cut(s) 371, 1296, 1340, 1372, 1500, 1685
AoxI GGCC 4 cut(s) 81, 282, 1447, 1604
ApaI GGGCCC 1 cut(s) 1608
ApeKI GCWGC 5 cut(s) 306, 309, 696, 938, 1682
AspLEI GCGC 3 cut(s) 144, 190, 427
AspS9I GGNCC 6 cut(s) 73, 671, 1264, 1448, 1604, 1605
AsuC2I CCSGG 3 cut(s) 68, 361, 438
AsuHPI GGTGA 2 cut(s) 1110, 1651
AvaII GGWCC 3 cut(s) 73, 671, 1264
BaeGI GKGCMC 2 cut(s) 438, 1608
BanI GGYRCC 2 cut(s) 433, 944
BanII GRGCYC 3 cut(s) 20, 302, 1608
BbsI GAAGAC 2 cut(s) 838, 902
Bbv12I GWGCWC 2 cut(s) 20, 1030
BbvCI CCTCAGC 1 cut(s) 219
BbvI GCAGC 5 cut(s) 318, 321, 683, 925, 1694
BccI CCATC 4 cut(s) 347, 1255, 1307, 1430
BceAI ACGGC 3 cut(s) 136, 412, 461
BcgI CGANNNNNNTGC 4 cut(s) 117, 151, 356, 390
BciT130I CCWGG 2 cut(s) 683, 1664
BcnI CCSGG 3 cut(s) 68, 361, 438
BcoDI GTCTC 2 cut(s) 95, 1044
BcuI ACTAGT 1 cut(s) 1211
BfaI CTAG 4 cut(s) 303, 560, 1212, 1310
BfmI CTRYAG 1 cut(s) 939
BfoI RGCGCY 2 cut(s) 191, 428
BfuAI ACCTGC 1 cut(s) 932
BglI GCCNNNNNGGC 1 cut(s) 290
Bme1390I CCNGG 5 cut(s) 68, 361, 438, 683, 1664
Bme18I GGWCC 3 cut(s) 73, 671, 1264
BmgBI CACGTC 1 cut(s) 181
BmgT120I GGNCC 6 cut(s) 73, 671, 1264, 1448, 1604, 1605
BmiI GGNNCC 8 cut(s) 204, 358, 435, 672, 946, 1428, 1606, 1607
BmrFI CCNGG 5 cut(s) 68, 361, 438, 683, 1664
BmrI ACTGGG 1 cut(s) 1612
BmsI GCATC 7 cut(s) 454, 655, 699, 744, 1094, 1171, 1311
BmuI ACTGGG 1 cut(s) 1612
BpiI GAAGAC 2 cut(s) 838, 902
BpmI CTGGAG 1 cut(s) 299
Bpu10I CCTNAGC 1 cut(s) 219
BpuMI CCSGG 3 cut(s) 68, 361, 438
Bsa29I ATCGAT 1 cut(s) 366
BsaAI YACGTR 1 cut(s) 1501
BsaBI GATNNNNATC 1 cut(s) 1363
BsaHI GRCGYC 1 cut(s) 123
BsaI GGTCTC 1 cut(s) 95
BsaJI CCNNGG 4 cut(s) 66, 428, 1146, 1662
BsaXI ACNNNNNCTCC 8 cut(s) 17, 47, 325, 355, 606, 636, 1393, 1423
Bsc4I CCNNNNNNNGG 6 cut(s) 444, 477, 827, 1361, 1436, 1797
Bse118I RCCGGY 2 cut(s) 320, 344
Bse1I ACTGG 2 cut(s) 1618, 1741
Bse8I GATNNNNATC 1 cut(s) 1363
BseBI CCWGG 2 cut(s) 683, 1664
BseCI ATCGAT 1 cut(s) 366
BseDI CCNNGG 4 cut(s) 66, 428, 1146, 1662
BseGI GGATG 4 cut(s) 466, 858, 1045, 1326
BseJI GATNNNNATC 1 cut(s) 1363
BseLI CCNNNNNNNGG 6 cut(s) 444, 477, 827, 1361, 1436, 1797
BseMII CTCAG 5 cut(s) 210, 1043, 1300, 1500, 1530
BseNI ACTGG 2 cut(s) 1618, 1741
BseRI GAGGAG 3 cut(s) 277, 1346, 1365
BseSI GKGCMC 2 cut(s) 438, 1608
BseXI GCAGC 5 cut(s) 318, 321, 683, 925, 1694
BseYI CCCAGC 4 cut(s) 638, 826, 1653, 1777
BsgI GTGCAG 1 cut(s) 682
Bsh1236I CGCG 4 cut(s) 11, 92, 142, 144
BshFI GGCC 4 cut(s) 83, 284, 1449, 1606
BshNI GGYRCC 2 cut(s) 433, 944
BshVI ATCGAT 1 cut(s) 366
BsiHKAI GWGCWC 2 cut(s) 20, 1030
BsiSI CCGG 6 cut(s) 21, 68, 321, 345, 360, 438
BslFI GGGAC 1 cut(s) 684
BslI CCNNNNNNNGG 6 cut(s) 444, 477, 827, 1361, 1436, 1797
BsmAI GTCTC 2 cut(s) 95, 1044
BsmBI CGTCTC 1 cut(s) 1044
BsmFI GGGAC 1 cut(s) 684
BsmI GAATGC 1 cut(s) 732
BsnI GGCC 4 cut(s) 83, 284, 1449, 1606
Bso31I GGTCTC 1 cut(s) 95
Bsp120I GGGCCC 1 cut(s) 1604
Bsp1286I GDGCHC 5 cut(s) 20, 302, 438, 1030, 1608
Bsp143I GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
Bsp19I CCATGG 1 cut(s) 1146
BspANI GGCC 4 cut(s) 83, 284, 1449, 1606
BspCNI CTCAG 5 cut(s) 211, 1042, 1299, 1501, 1529
BspDI ATCGAT 1 cut(s) 366
BspFNI CGCG 4 cut(s) 11, 92, 142, 144
BspLI GGNNCC 8 cut(s) 204, 358, 435, 672, 946, 1428, 1606, 1607
BspMAI CTGCAG 1 cut(s) 943
BspMI ACCTGC 1 cut(s) 932
BspPI GGATC 6 cut(s) 371, 1296, 1340, 1372, 1500, 1685
BspQI GCTCTTC 1 cut(s) 699
BspT107I GGYRCC 2 cut(s) 433, 944
BspTNI GGTCTC 1 cut(s) 95
BsrBI CCGCTC 1 cut(s) 237
BsrFI RCCGGY 2 cut(s) 320, 344
BsrI ACTGG 2 cut(s) 1618, 1741
BssAI RCCGGY 2 cut(s) 320, 344
BssECI CCNNGG 4 cut(s) 66, 428, 1146, 1662
BssMI GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
BssNI GRCGYC 1 cut(s) 123
BssT1I CCWWGG 1 cut(s) 1146
Bst2UI CCWGG 2 cut(s) 683, 1664
Bst4CI ACNGT 3 cut(s) 407, 749, 1733
Bst6I CTCTTC 5 cut(s) 168, 699, 856, 1047, 1621
BstACI GRCGYC 1 cut(s) 123
BstAPI GCANNNNNTGC 1 cut(s) 696
BstBAI YACGTR 1 cut(s) 1501
BstC8I GCNNGC 5 cut(s) 210, 322, 936, 1130, 1786
BstDEI CTNAG 6 cut(s) 219, 509, 1029, 1286, 1509, 1516
BstDSI CCRYGG 2 cut(s) 428, 1146
BstEII GGTNACC 1 cut(s) 1657
BstF5I GGATG 4 cut(s) 466, 858, 1045, 1326
BstFNI CGCG 4 cut(s) 11, 92, 142, 144
BstH2I RGCGCY 2 cut(s) 191, 428
BstHHI GCGC 3 cut(s) 144, 190, 427
BstKTI GATC 9 cut(s) 165, 366, 619, 1304, 1348, 1361, 1367, 1495, 1693
BstMAI GTCTC 2 cut(s) 95, 1044
BstMBI GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
BstNI CCWGG 2 cut(s) 683, 1664
BstNSI RCATGY 3 cut(s) 452, 899, 1060
BstPI GGTNACC 1 cut(s) 1657
BstSCI CCNGG 5 cut(s) 66, 359, 436, 681, 1662
BstSFI CTRYAG 1 cut(s) 939
BstSLI GKGCMC 2 cut(s) 438, 1608
BstSNI TACGTA 1 cut(s) 1501
BstUI CGCG 4 cut(s) 11, 92, 142, 144
BstV1I GCAGC 5 cut(s) 318, 321, 683, 925, 1694
BstV2I GAAGAC 2 cut(s) 838, 902
BstX2I RGATCY 2 cut(s) 1301, 1364
BstYI RGATCY 2 cut(s) 1301, 1364
Bsu15I ATCGAT 1 cut(s) 366
BsuRI GGCC 4 cut(s) 83, 284, 1449, 1606
BsuTUI ATCGAT 1 cut(s) 366
BtgI CCRYGG 2 cut(s) 428, 1146
BtrI CACGTC 1 cut(s) 181
BtsCI GGATG 4 cut(s) 466, 858, 1045, 1326
BtsIMutI CAGTG 2 cut(s) 1294, 1748
BveI ACCTGC 1 cut(s) 932
Cac8I GCNNGC 5 cut(s) 210, 322, 936, 1130, 1786
CfoI GCGC 3 cut(s) 144, 190, 427
Cfr10I RCCGGY 2 cut(s) 320, 344
Cfr13I GGNCC 6 cut(s) 73, 671, 1264, 1448, 1604, 1605
ClaI ATCGAT 1 cut(s) 366
CseI GACGC 2 cut(s) 112, 1026
CsiI ACCWGGT 1 cut(s) 681
CspCI CAANNNNNGTGG 2 cut(s) 410, 445
DdeI CTNAG 6 cut(s) 219, 509, 1029, 1286, 1509, 1516
DpnI GATC 9 cut(s) 164, 365, 618, 1303, 1347, 1360, 1366, 1494, 1692
DpnII GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 5 cut(s) 168, 699, 856, 1047, 1621
EarI CTCTTC 5 cut(s) 168, 699, 856, 1047, 1621
EciI GGCGGA 2 cut(s) 195, 308
Ecl136II GAGCTC 1 cut(s) 18
Eco105I TACGTA 1 cut(s) 1501
Eco130I CCWWGG 1 cut(s) 1146
Eco24I GRGCYC 3 cut(s) 20, 302, 1608
Eco31I GGTCTC 1 cut(s) 95
Eco47I GGWCC 3 cut(s) 73, 671, 1264
Eco53kI GAGCTC 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 1292
Eco91I GGTNACC 1 cut(s) 1657
EcoICRI GAGCTC 1 cut(s) 18
EcoO109I RGGNCCY 1 cut(s) 1605
EcoO65I GGTNACC 1 cut(s) 1657
EcoRII CCWGG 2 cut(s) 681, 1662
EcoT14I CCWWGG 1 cut(s) 1146
EcoT22I ATGCAT 3 cut(s) 692, 901, 1590
EcoT38I GRGCYC 3 cut(s) 20, 302, 1608
ErhI CCWWGG 1 cut(s) 1146
Esp3I CGTCTC 1 cut(s) 1044
FalI AAGNNNNNCTT 4 cut(s) 482, 514, 1026, 1058
FaqI GGGAC 1 cut(s) 684
FauI CCCGC 1 cut(s) 137
FauNDI CATATG 2 cut(s) 130, 1432
FokI GGATG 4 cut(s) 473, 845, 1032, 1333
FriOI GRGCYC 3 cut(s) 20, 302, 1608
FspBI CTAG 4 cut(s) 303, 560, 1212, 1310
GlaI GCGC 3 cut(s) 143, 189, 426
GsaI CCCAGC 4 cut(s) 642, 830, 1657, 1781
GsuI CTGGAG 1 cut(s) 299
HaeII RGCGCY 2 cut(s) 191, 428
HaeIII GGCC 4 cut(s) 83, 284, 1449, 1606
HapII CCGG 6 cut(s) 21, 68, 321, 345, 360, 438
HgaI GACGC 2 cut(s) 112, 1026
HhaI GCGC 3 cut(s) 144, 190, 427
Hin1I GRCGYC 1 cut(s) 123
Hin6I GCGC 3 cut(s) 142, 188, 425
HinP1I GCGC 3 cut(s) 142, 188, 425
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 1571
HpaII CCGG 6 cut(s) 21, 68, 321, 345, 360, 438
HphI GGTGA 2 cut(s) 1110, 1651
Hpy166II GTNNAC 1 cut(s) 403
Hpy188III TCNNGA 6 cut(s) 166, 537, 1049, 1343, 1362, 1412
Hpy8I GTNNAC 1 cut(s) 403
Hpy99I CGWCG 4 cut(s) 16, 29, 128, 290
HpyAV CCTTC 3 cut(s) 374, 1234, 1277
HpyCH4III ACNGT 3 cut(s) 407, 749, 1733
HpyCH4IV ACGT 2 cut(s) 180, 1500
HpyF3I CTNAG 6 cut(s) 219, 509, 1029, 1286, 1509, 1516
HpySE526I ACGT 2 cut(s) 180, 1500
Hsp92I GRCGYC 1 cut(s) 123
HspAI GCGC 3 cut(s) 142, 188, 425
KroI GCCGGC 1 cut(s) 320
KroNI GCCGGC 1 cut(s) 322
Kzo9I GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
LguI GCTCTTC 1 cut(s) 699
LmnI GCTCC 4 cut(s) 23, 208, 264, 274
Lsp1109I GCAGC 5 cut(s) 318, 321, 683, 925, 1694
LweI GCATC 7 cut(s) 454, 655, 699, 744, 1094, 1171, 1311
MabI ACCWGGT 1 cut(s) 681
MaeI CTAG 4 cut(s) 303, 560, 1212, 1310
MaeII ACGT 2 cut(s) 180, 1500
MaeIII GTNAC 2 cut(s) 512, 1657
MalI GATC 9 cut(s) 164, 365, 618, 1303, 1347, 1360, 1366, 1494, 1692
MbiI CCGCTC 1 cut(s) 237
MboI GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
MfeI CAATTG 2 cut(s) 77, 731
MflI RGATCY 2 cut(s) 1301, 1364
MhlI GDGCHC 5 cut(s) 20, 302, 438, 1030, 1608
MlyI GAGTC 2 cut(s) 725, 1452
MmeI TCCRAC 4 cut(s) 60, 854, 1095, 1424
Mph1103I ATGCAT 3 cut(s) 692, 901, 1590
MroNI GCCGGC 1 cut(s) 320
MseI TTAA 1 cut(s) 722
MslI CAYNNNNRTG 3 cut(s) 453, 546, 1050
MspA1I CMGCKG 2 cut(s) 312, 696
MspI CCGG 6 cut(s) 21, 68, 321, 345, 360, 438
MspR9I CCNGG 5 cut(s) 68, 361, 438, 683, 1664
MunI CAATTG 2 cut(s) 77, 731
Mva1269I GAATGC 1 cut(s) 732
MvaI CCWGG 2 cut(s) 683, 1664
MvnI CGCG 4 cut(s) 11, 92, 142, 144
NaeI GCCGGC 1 cut(s) 322
NciI CCSGG 3 cut(s) 68, 361, 438
NcoI CCATGG 1 cut(s) 1146
NdeI CATATG 2 cut(s) 130, 1432
NdeII GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
NgoMIV GCCGGC 1 cut(s) 320
NlaIV GGNNCC 8 cut(s) 204, 358, 435, 672, 946, 1428, 1606, 1607
NmuCI GTSAC 1 cut(s) 1657
NsiI ATGCAT 3 cut(s) 692, 901, 1590
NspI RCATGY 3 cut(s) 452, 899, 1060
PaqCI CACCTGC 1 cut(s) 932
PciSI GCTCTTC 1 cut(s) 699
PcsI WCGNNNNNNNCGW 3 cut(s) 33, 96, 177
PctI GAATGC 1 cut(s) 732
PdiI GCCGGC 1 cut(s) 322
PflMI CCANNNNNTGG 2 cut(s) 477, 1436
PfoI TCCNGGA 1 cut(s) 359
PleI GAGTC 2 cut(s) 724, 1452
PpsI GAGTC 2 cut(s) 724, 1452
Ppu21I YACGTR 1 cut(s) 1501
Psp124BI GAGCTC 1 cut(s) 20
Psp6I CCWGG 2 cut(s) 681, 1662
PspEI GGTNACC 1 cut(s) 1657
PspFI CCCAGC 4 cut(s) 638, 826, 1653, 1777
PspGI CCWGG 2 cut(s) 681, 1662
PspN4I GGNNCC 8 cut(s) 204, 358, 435, 672, 946, 1428, 1606, 1607
PspOMI GGGCCC 1 cut(s) 1604
PspPI GGNCC 6 cut(s) 73, 671, 1264, 1448, 1604, 1605
PsrI GAACNNNNNNTAC 2 cut(s) 340, 372
PstI CTGCAG 1 cut(s) 943
PsuI RGATCY 2 cut(s) 1301, 1364
PvuII CAGCTG 1 cut(s) 696
RseI CAYNNNNRTG 3 cut(s) 453, 546, 1050
SacI GAGCTC 1 cut(s) 20
SapI GCTCTTC 1 cut(s) 699
SaqAI TTAA 1 cut(s) 722
Sau3AI GATC 9 cut(s) 162, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
Sau96I GGNCC 6 cut(s) 73, 671, 1264, 1448, 1604, 1605
SchI GAGTC 2 cut(s) 725, 1452
ScrFI CCNGG 5 cut(s) 68, 361, 438, 683, 1664
SduI GDGCHC 5 cut(s) 20, 302, 438, 1030, 1608
SexAI ACCWGGT 1 cut(s) 681
SfaNI GCATC 7 cut(s) 454, 655, 699, 744, 1094, 1171, 1311
SfcI CTRYAG 1 cut(s) 939
SinI GGWCC 3 cut(s) 73, 671, 1264
SmiMI CAYNNNNRTG 3 cut(s) 453, 546, 1050
SnaBI TACGTA 1 cut(s) 1501
SpeI ACTAGT 1 cut(s) 1211
SspI AATATT 1 cut(s) 990
SspMI CTAG 4 cut(s) 303, 560, 1212, 1310
SstI GAGCTC 1 cut(s) 20
StyD4I CCNGG 5 cut(s) 66, 359, 436, 681, 1662
StyI CCWWGG 1 cut(s) 1146
TaaI ACNGT 3 cut(s) 407, 749, 1733
TaiI ACGT 2 cut(s) 183, 1503
TaqI TCGA 7 cut(s) 14, 165, 233, 366, 1179, 1277, 1357
TaqII GACCGA 1 cut(s) 119
TauI GCSGC 5 cut(s) 86, 142, 188, 315, 327
Tru1I TTAA 1 cut(s) 722
Tru9I TTAA 1 cut(s) 722
TscAI CASTG 2 cut(s) 1294, 1748
TseFI GTSAC 1 cut(s) 1657
TseI GCWGC 5 cut(s) 306, 309, 696, 938, 1682
Tsp45I GTSAC 1 cut(s) 1657
TspDTI ATGAA 6 cut(s) 147, 493, 564, 1034, 1605, 1785
TspRI CASTG 2 cut(s) 1294, 1748
Van91I CCANNNNNTGG 2 cut(s) 477, 1436
VpaK11BI GGWCC 3 cut(s) 73, 671, 1264
XceI RCATGY 3 cut(s) 452, 899, 1060
XcmI CCANNNNNNNNNTGG 1 cut(s) 1078
XspI CTAG 4 cut(s) 303, 560, 1212, 1310
Zsp2I ATGCAT 3 cut(s) 692, 901, 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.