Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 86 |
| AccBSI | CCGCTC | 1 cut(s) | 93 |
| AccI | GTMKAC | 1 cut(s) | 17 |
| AciI | CCGC | 3 cut(s) | 35, 55, 91 |
| AcsI | RAATTY | 1 cut(s) | 199 |
| AfaI | GTAC | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 69 |
| AgsI | TTSAA | 3 cut(s) | 112, 187, 212 |
| AhlI | ACTAGT | 1 cut(s) | 175 |
| AluBI | AGCT | 1 cut(s) | 115 |
| AluI | AGCT | 1 cut(s) | 115 |
| ApeKI | GCWGC | 1 cut(s) | 51 |
| ApoI | RAATTY | 1 cut(s) | 199 |
| AspS9I | GGNCC | 1 cut(s) | 223 |
| AsuHPI | GGTGA | 1 cut(s) | 151 |
| AvaII | GGWCC | 1 cut(s) | 223 |
| BbsI | GAAGAC | 1 cut(s) | 153 |
| BbvI | GCAGC | 1 cut(s) | 63 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 46, 80 |
| BcuI | ACTAGT | 1 cut(s) | 175 |
| BfaI | CTAG | 1 cut(s) | 176 |
| BisI | GCNGC | 2 cut(s) | 52, 55 |
| BlsI | GCNGC | 2 cut(s) | 53, 56 |
| Bme18I | GGWCC | 1 cut(s) | 223 |
| BmgT120I | GGNCC | 1 cut(s) | 223 |
| BpiI | GAAGAC | 1 cut(s) | 153 |
| BsaJI | CCNNGG | 1 cut(s) | 219 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 69 |
| BseDI | CCNNGG | 1 cut(s) | 219 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BseXI | GCAGC | 1 cut(s) | 63 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 69 |
| Bsp143I | GATC | 3 cut(s) | 21, 84, 231 |
| Bsp19I | CCATGG | 1 cut(s) | 219 |
| BspACI | CCGC | 3 cut(s) | 35, 55, 91 |
| BsrBI | CCGCTC | 1 cut(s) | 93 |
| BssECI | CCNNGG | 1 cut(s) | 219 |
| BssMI | GATC | 3 cut(s) | 21, 84, 231 |
| BssT1I | CCWWGG | 1 cut(s) | 219 |
| Bst6I | CTCTTC | 2 cut(s) | 125, 161 |
| BstC8I | GCNNGC | 1 cut(s) | 39 |
| BstDSI | CCRYGG | 1 cut(s) | 219 |
| BstKTI | GATC | 3 cut(s) | 24, 87, 234 |
| BstMBI | GATC | 3 cut(s) | 21, 84, 231 |
| BstV1I | GCAGC | 1 cut(s) | 63 |
| BstV2I | GAAGAC | 1 cut(s) | 153 |
| BtgI | CCRYGG | 1 cut(s) | 219 |
| Cac8I | GCNNGC | 1 cut(s) | 39 |
| Cfr13I | GGNCC | 1 cut(s) | 223 |
| Csp6I | GTAC | 1 cut(s) | 173 |
| CviAII | CATG | 3 cut(s) | 128, 194, 220 |
| CviJI | RGCY | 5 cut(s) | 30, 54, 62, 115, 215 |
| CviKI_1 | RGCY | 5 cut(s) | 30, 54, 62, 115, 215 |
| CviQI | GTAC | 1 cut(s) | 173 |
| DpnI | GATC | 3 cut(s) | 23, 86, 233 |
| DpnII | GATC | 3 cut(s) | 21, 84, 231 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 86 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 86 |
| Eam1104I | CTCTTC | 2 cut(s) | 125, 161 |
| EarI | CTCTTC | 2 cut(s) | 125, 161 |
| Eco130I | CCWWGG | 1 cut(s) | 219 |
| Eco47I | GGWCC | 1 cut(s) | 223 |
| EcoT14I | CCWWGG | 1 cut(s) | 219 |
| ErhI | CCWWGG | 1 cut(s) | 219 |
| FaeI | CATG | 3 cut(s) | 131, 197, 223 |
| FaiI | YATR | 4 cut(s) | 47, 129, 195, 221 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 104, 136 |
| FatI | CATG | 3 cut(s) | 127, 193, 219 |
| FauI | CCCGC | 1 cut(s) | 42 |
| FblI | GTMKAC | 1 cut(s) | 17 |
| Fnu4HI | GCNGC | 2 cut(s) | 52, 55 |
| Fsp4HI | GCNGC | 2 cut(s) | 52, 55 |
| FspBI | CTAG | 1 cut(s) | 176 |
| GluI | GCNGC | 2 cut(s) | 52, 55 |
| Hin1II | CATG | 3 cut(s) | 131, 197, 223 |
| HincII | GTYRAC | 1 cut(s) | 18 |
| HindII | GTYRAC | 1 cut(s) | 18 |
| HindIII | AAGCTT | 1 cut(s) | 113 |
| HinfI | GANTC | 2 cut(s) | 14, 73 |
| HphI | GGTGA | 1 cut(s) | 151 |
| Hpy166II | GTNNAC | 3 cut(s) | 10, 18, 72 |
| Hpy188I | TCNGA | 1 cut(s) | 106 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 140 |
| Hpy8I | GTNNAC | 3 cut(s) | 10, 18, 72 |
| Hpy99I | CGWCG | 1 cut(s) | 22 |
| HpyAV | CCTTC | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 1 cut(s) | 167 |
| Hsp92II | CATG | 3 cut(s) | 131, 197, 223 |
| Kzo9I | GATC | 3 cut(s) | 21, 84, 231 |
| LmnI | GCTCC | 1 cut(s) | 98 |
| LpnPI | CCDG | 1 cut(s) | 153 |
| Lsp1109I | GCAGC | 1 cut(s) | 63 |
| MaeI | CTAG | 1 cut(s) | 176 |
| MalI | GATC | 3 cut(s) | 23, 86, 233 |
| MbiI | CCGCTC | 1 cut(s) | 93 |
| MboI | GATC | 3 cut(s) | 21, 84, 231 |
| MboII | GAAGA | 3 cut(s) | 112, 148, 158 |
| MluCI | AATT | 1 cut(s) | 199 |
| MlyI | GAGTC | 2 cut(s) | 23, 67 |
| MmeI | TCCRAC | 2 cut(s) | 120, 129 |
| MnlI | CCTC | 4 cut(s) | 52, 112, 134, 226 |
| NcoI | CCATGG | 1 cut(s) | 219 |
| NdeII | GATC | 3 cut(s) | 21, 84, 231 |
| NlaIII | CATG | 3 cut(s) | 131, 197, 223 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 84 |
| PkrI | GCNGC | 2 cut(s) | 53, 56 |
| PleI | GAGTC | 2 cut(s) | 22, 67 |
| PpsI | GAGTC | 2 cut(s) | 22, 67 |
| PspPI | GGNCC | 1 cut(s) | 223 |
| RsaI | GTAC | 1 cut(s) | 174 |
| RsaNI | GTAC | 1 cut(s) | 173 |
| SalI | GTCGAC | 1 cut(s) | 16 |
| SatI | GCNGC | 2 cut(s) | 52, 55 |
| Sau3AI | GATC | 3 cut(s) | 21, 84, 231 |
| Sau96I | GGNCC | 1 cut(s) | 223 |
| SchI | GAGTC | 2 cut(s) | 23, 67 |
| SetI | ASST | 3 cut(s) | 104, 117, 164 |
| SinI | GGWCC | 1 cut(s) | 223 |
| SpeI | ACTAGT | 1 cut(s) | 175 |
| Sse9I | AATT | 1 cut(s) | 199 |
| SsiI | CCGC | 3 cut(s) | 35, 55, 91 |
| SspMI | CTAG | 1 cut(s) | 176 |
| StyI | CCWWGG | 1 cut(s) | 219 |
| TaqI | TCGA | 3 cut(s) | 17, 66, 78 |
| TasI | AATT | 1 cut(s) | 199 |
| TatI | WGTACW | 1 cut(s) | 172 |
| TauI | GCSGC | 1 cut(s) | 57 |
| TseI | GCWGC | 1 cut(s) | 51 |
| TspDTI | ATGAA | 1 cut(s) | 159 |
| VpaK11BI | GGWCC | 1 cut(s) | 223 |
| XapI | RAATTY | 1 cut(s) | 199 |
| XmiI | GTMKAC | 1 cut(s) | 17 |
| XspI | CTAG | 1 cut(s) | 176 |