Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 68 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 76 |
| AflIII | ACRYGT | 1 cut(s) | 102 |
| AgsI | TTSAA | 1 cut(s) | 309 |
| AjnI | CCWGG | 1 cut(s) | 9 |
| AoxI | GGCC | 1 cut(s) | 247 |
| ApeKI | GCWGC | 1 cut(s) | 149 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 228 |
| AspS9I | GGNCC | 1 cut(s) | 248 |
| BbvI | GCAGC | 1 cut(s) | 136 |
| BccI | CCATC | 1 cut(s) | 14 |
| BciT130I | CCWGG | 1 cut(s) | 11 |
| BfaI | CTAG | 1 cut(s) | 15 |
| BisI | GCNGC | 1 cut(s) | 150 |
| BlsI | GCNGC | 1 cut(s) | 151 |
| Bme1390I | CCNGG | 1 cut(s) | 11 |
| BmgT120I | GGNCC | 1 cut(s) | 248 |
| BmiI | GGNNCC | 1 cut(s) | 250 |
| BmrFI | CCNGG | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 1 cut(s) | 9 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 76 |
| BseBI | CCWGG | 1 cut(s) | 11 |
| BseDI | CCNNGG | 1 cut(s) | 9 |
| BseGI | GGATG | 3 cut(s) | 155, 172, 226 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BseMII | CTCAG | 1 cut(s) | 27 |
| BseRI | GAGGAG | 1 cut(s) | 307 |
| BseXI | GCAGC | 1 cut(s) | 136 |
| BshFI | GGCC | 1 cut(s) | 249 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BsnI | GGCC | 1 cut(s) | 249 |
| BspANI | GGCC | 1 cut(s) | 249 |
| BspCNI | CTCAG | 1 cut(s) | 28 |
| BspLI | GGNNCC | 1 cut(s) | 250 |
| BssECI | CCNNGG | 1 cut(s) | 9 |
| Bst2UI | CCWGG | 1 cut(s) | 11 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 146 |
| BstDEI | CTNAG | 1 cut(s) | 36 |
| BstF5I | GGATG | 3 cut(s) | 155, 172, 226 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BstNI | CCWGG | 1 cut(s) | 11 |
| BstNSI | RCATGY | 1 cut(s) | 106 |
| BstSCI | CCNGG | 1 cut(s) | 9 |
| BstV1I | GCAGC | 1 cut(s) | 136 |
| BsuRI | GGCC | 1 cut(s) | 249 |
| BtsCI | GGATG | 3 cut(s) | 155, 172, 226 |
| Cfr13I | GGNCC | 1 cut(s) | 248 |
| Csp6I | GTAC | 1 cut(s) | 67 |
| CviAII | CATG | 2 cut(s) | 103, 160 |
| CviJI | RGCY | 3 cut(s) | 14, 80, 249 |
| CviKI_1 | RGCY | 3 cut(s) | 14, 80, 249 |
| CviQI | GTAC | 1 cut(s) | 67 |
| DdeI | CTNAG | 1 cut(s) | 36 |
| EcoO109I | RGGNCCY | 1 cut(s) | 248 |
| EcoRII | CCWGG | 1 cut(s) | 9 |
| FaeI | CATG | 2 cut(s) | 106, 163 |
| FaiI | YATR | 5 cut(s) | 104, 161, 259, 275, 302 |
| FatI | CATG | 2 cut(s) | 102, 159 |
| Fnu4HI | GCNGC | 1 cut(s) | 150 |
| FokI | GGATG | 3 cut(s) | 142, 179, 233 |
| Fsp4HI | GCNGC | 1 cut(s) | 150 |
| FspBI | CTAG | 1 cut(s) | 15 |
| GluI | GCNGC | 1 cut(s) | 150 |
| HaeIII | GGCC | 1 cut(s) | 249 |
| Hin1II | CATG | 2 cut(s) | 106, 163 |
| Hpy188I | TCNGA | 2 cut(s) | 37, 204 |
| Hpy188III | TCNNGA | 2 cut(s) | 112, 211 |
| HpyCH4IV | ACGT | 1 cut(s) | 285 |
| HpyCH4V | TGCA | 2 cut(s) | 130, 140 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| HpyF3I | CTNAG | 1 cut(s) | 36 |
| HpySE526I | ACGT | 1 cut(s) | 285 |
| Hsp92II | CATG | 2 cut(s) | 106, 163 |
| LpnPI | CCDG | 2 cut(s) | 23, 62 |
| Lsp1109I | GCAGC | 1 cut(s) | 136 |
| MaeI | CTAG | 1 cut(s) | 15 |
| MaeII | ACGT | 1 cut(s) | 285 |
| MboII | GAAGA | 1 cut(s) | 297 |
| MluCI | AATT | 1 cut(s) | 84 |
| MmeI | TCCRAC | 2 cut(s) | 144, 257 |
| MnlI | CCTC | 4 cut(s) | 31, 211, 262, 285 |
| MroXI | GAANNNNTTC | 1 cut(s) | 228 |
| MseI | TTAA | 3 cut(s) | 53, 83, 98 |
| MspR9I | CCNGG | 1 cut(s) | 11 |
| MvaI | CCWGG | 1 cut(s) | 11 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NlaIII | CATG | 2 cut(s) | 106, 163 |
| NlaIV | GGNNCC | 1 cut(s) | 250 |
| NspI | RCATGY | 1 cut(s) | 106 |
| PciI | ACATGT | 1 cut(s) | 102 |
| PdmI | GAANNNNTTC | 1 cut(s) | 228 |
| PkrI | GCNGC | 1 cut(s) | 151 |
| PscI | ACATGT | 1 cut(s) | 102 |
| Psp6I | CCWGG | 1 cut(s) | 9 |
| PspGI | CCWGG | 1 cut(s) | 9 |
| PspN4I | GGNNCC | 1 cut(s) | 250 |
| PspPI | GGNCC | 1 cut(s) | 248 |
| RsaI | GTAC | 1 cut(s) | 68 |
| RsaNI | GTAC | 1 cut(s) | 67 |
| SaqAI | TTAA | 3 cut(s) | 53, 83, 98 |
| SatI | GCNGC | 1 cut(s) | 150 |
| Sau96I | GGNCC | 1 cut(s) | 248 |
| ScrFI | CCNGG | 1 cut(s) | 11 |
| SetI | ASST | 4 cut(s) | 42, 98, 147, 288 |
| Sse9I | AATT | 1 cut(s) | 84 |
| SspI | AATATT | 1 cut(s) | 196 |
| SspMI | CTAG | 1 cut(s) | 15 |
| StyD4I | CCNGG | 1 cut(s) | 9 |
| TaiI | ACGT | 1 cut(s) | 288 |
| TasI | AATT | 1 cut(s) | 84 |
| Tru1I | TTAA | 3 cut(s) | 53, 83, 98 |
| Tru9I | TTAA | 3 cut(s) | 53, 83, 98 |
| TseI | GCWGC | 1 cut(s) | 149 |
| TspDTI | ATGAA | 1 cut(s) | 237 |
| XceI | RCATGY | 1 cut(s) | 106 |
| XmnI | GAANNNNTTC | 1 cut(s) | 228 |
| XspI | CTAG | 1 cut(s) | 15 |