Rh3BG302000

ACT domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0011566
Physical Location & Seq
Forward (+)
30378768 .. 30380150
1383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG302000.1

Sequence Viewer

Length: 213 bp
ATGACGAAATTGAAGAACGCTAATGTAACAATAGGCAACTCATTGAGCCCAGCACATACATTACTTCAGATCCACTGTGCTGATCACAAGGGTCTCTTGTATGACATTATGAGAACTTTGAAAGACAGCAACATCAAGGTTCTTACTGAGGGTAAACAAAAGGATGTACTTAAAGCTGCTGGTGCATTGTTTTCACATATTTTTGAGGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ACT

Protein Analysis

70

Amino Acids

7.7

Weight (kDa)

9.25

Isoelectric Point (pI)

35.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ACT_ACR9_3rd PF24931 8 - 48 3.6e-19 ACR9-like, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 64
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 1 cut(s) 168
AgsI TTSAA 2 cut(s) 13, 121
AluBI AGCT 1 cut(s) 176
AluI AGCT 1 cut(s) 176
Alw26I GTCTC 1 cut(s) 98
AlwI GGATC 1 cut(s) 64
ApeKI GCWGC 1 cut(s) 176
BanII GRGCYC 1 cut(s) 50
BbvI GCAGC 1 cut(s) 163
BclI TGATCA 1 cut(s) 82
BcoDI GTCTC 1 cut(s) 98
BisI GCNGC 1 cut(s) 177
BlsI GCNGC 1 cut(s) 178
BsaI GGTCTC 1 cut(s) 98
BseGI GGATG 1 cut(s) 169
BseMII CTCAG 1 cut(s) 138
BseXI GCAGC 1 cut(s) 163
BseYI CCCAGC 1 cut(s) 49
BsmAI GTCTC 1 cut(s) 98
Bso31I GGTCTC 1 cut(s) 98
Bsp1286I GDGCHC 1 cut(s) 50
Bsp143I GATC 2 cut(s) 69, 82
BspCNI CTCAG 1 cut(s) 139
BspPI GGATC 1 cut(s) 64
BspTNI GGTCTC 1 cut(s) 98
BssMI GATC 2 cut(s) 69, 82
Bst4CI ACNGT 1 cut(s) 77
BstDEI CTNAG 1 cut(s) 147
BstF5I GGATG 1 cut(s) 169
BstKTI GATC 2 cut(s) 72, 85
BstMAI GTCTC 1 cut(s) 98
BstMBI GATC 2 cut(s) 69, 82
BstMWI GCNNNNNNNGC 1 cut(s) 182
BstV1I GCAGC 1 cut(s) 163
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
BtsCI GGATG 1 cut(s) 169
BtsIMutI CAGTG 1 cut(s) 73
Csp6I GTAC 1 cut(s) 167
CviJI RGCY 2 cut(s) 48, 176
CviKI_1 RGCY 2 cut(s) 48, 176
CviQI GTAC 1 cut(s) 167
DdeI CTNAG 1 cut(s) 147
DpnI GATC 2 cut(s) 71, 84
DpnII GATC 2 cut(s) 69, 82
Eco24I GRGCYC 1 cut(s) 50
Eco31I GGTCTC 1 cut(s) 98
Eco57I CTGAAG 1 cut(s) 50
EcoT38I GRGCYC 1 cut(s) 50
FaiI YATR 4 cut(s) 57, 102, 110, 198
FalI AAGNNNNNCTT 2 cut(s) 80, 112
FbaI TGATCA 1 cut(s) 82
Fnu4HI GCNGC 1 cut(s) 177
FokI GGATG 1 cut(s) 176
FriOI GRGCYC 1 cut(s) 50
Fsp4HI GCNGC 1 cut(s) 177
GluI GCNGC 1 cut(s) 177
GsaI CCCAGC 1 cut(s) 53
Hpy166II GTNNAC 1 cut(s) 155
Hpy188I TCNGA 1 cut(s) 69
Hpy8I GTNNAC 1 cut(s) 155
HpyCH4III ACNGT 1 cut(s) 77
HpyCH4V TGCA 1 cut(s) 185
HpyF10VI GCNNNNNNNGC 1 cut(s) 182
HpyF3I CTNAG 1 cut(s) 147
Ksp22I TGATCA 1 cut(s) 82
Kzo9I GATC 2 cut(s) 69, 82
LpnPI CCDG 2 cut(s) 63, 165
Lsp1109I GCAGC 1 cut(s) 163
MaeIII GTNAC 1 cut(s) 25
MalI GATC 2 cut(s) 71, 84
MboI GATC 2 cut(s) 69, 82
MboII GAAGA 1 cut(s) 25
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 1 cut(s) 50
MluCI AATT 1 cut(s) 8
MnlI CCTC 2 cut(s) 142, 199
MseI TTAA 1 cut(s) 171
MwoI GCNNNNNNNGC 1 cut(s) 182
NdeII GATC 2 cut(s) 69, 82
PkrI GCNGC 1 cut(s) 178
PspFI CCCAGC 1 cut(s) 49
PsuI RGATCY 1 cut(s) 69
RsaI GTAC 1 cut(s) 168
RsaNI GTAC 1 cut(s) 167
SaqAI TTAA 1 cut(s) 171
SatI GCNGC 1 cut(s) 177
Sau3AI GATC 2 cut(s) 69, 82
SduI GDGCHC 1 cut(s) 50
SetI ASST 3 cut(s) 141, 178, 210
SgeI CNNG 5 cut(s) 62, 100, 109, 148, 192
Sse9I AATT 1 cut(s) 8
TaaI ACNGT 1 cut(s) 77
TasI AATT 1 cut(s) 8
TatI WGTACW 1 cut(s) 166
Tru1I TTAA 1 cut(s) 171
Tru9I TTAA 1 cut(s) 171
TscAI CASTG 1 cut(s) 80
TseI GCWGC 1 cut(s) 176
TspRI CASTG 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.