EF hand family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64850 |
| fragaria_vesca | FvH4_7g07320 |
| malus_domestica | MD02G1236300.v1.1 MD07G1078400.v1.1 |
| prunus_persica | Prupe.2G101300_v2.0.a1 |
| pyrus_communis | pycom02g20330 pycom02g20340 pycom03g02200 pycom07g06230 pycom11g02620 |
| rosa_chinensis | RchiOBHm_Chr1g0340081 RchiOBHm_Chr5g0033761 |
| rosa_laevigata | RLG00000029259 |
| rosa_multiflora | Rmu_sc0001215.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00097610 Rroxscaffold_3G00237600 Rroxscaffold_4G00312810 Rroxscaffold_4G00313970 |
| rosa_rugosa | Rorug01G0136100.1 Rorug01G0137100.1 |
| rosa_samantha | Rh1AG156600 Rh1BG125000 Rh1CG146200 Rh1DG086800 Rh4BG205300 Rh4BG413000 Rh4DG287800 |
| rosa_wichuraiana | Rw1G012840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 3 cut(s) | 69, 130, 217 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 61 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 28, 60 |
| AluBI | AGCT | 1 cut(s) | 41 |
| AluI | AGCT | 1 cut(s) | 41 |
| AoxI | GGCC | 1 cut(s) | 219 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 173, 205 |
| AspS9I | GGNCC | 1 cut(s) | 44 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| AvaII | GGWCC | 1 cut(s) | 44 |
| BbsI | GAAGAC | 1 cut(s) | 57 |
| BccI | CCATC | 1 cut(s) | 161 |
| BclI | TGATCA | 1 cut(s) | 121 |
| Bme18I | GGWCC | 1 cut(s) | 44 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 1 cut(s) | 44 |
| BmiI | GGNNCC | 1 cut(s) | 46 |
| BmsI | GCATC | 1 cut(s) | 7 |
| BpiI | GAAGAC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 1 cut(s) | 48 |
| Bse3DI | GCAATG | 1 cut(s) | 83 |
| BseDI | CCNNGG | 1 cut(s) | 48 |
| BseGI | GGATG | 1 cut(s) | 172 |
| BseMI | GCAATG | 1 cut(s) | 83 |
| BshFI | GGCC | 1 cut(s) | 221 |
| BslFI | GGGAC | 1 cut(s) | 30 |
| BsmFI | GGGAC | 1 cut(s) | 30 |
| BsnI | GGCC | 1 cut(s) | 221 |
| Bsp143I | GATC | 1 cut(s) | 121 |
| BspANI | GGCC | 1 cut(s) | 221 |
| BspLI | GGNNCC | 1 cut(s) | 46 |
| BspQI | GCTCTTC | 1 cut(s) | 139 |
| BsrDI | GCAATG | 1 cut(s) | 83 |
| BssECI | CCNNGG | 1 cut(s) | 48 |
| BssMI | GATC | 1 cut(s) | 121 |
| BssT1I | CCWWGG | 1 cut(s) | 48 |
| Bst6I | CTCTTC | 1 cut(s) | 139 |
| BstDEI | CTNAG | 1 cut(s) | 6 |
| BstF5I | GGATG | 1 cut(s) | 172 |
| BstKTI | GATC | 1 cut(s) | 124 |
| BstMBI | GATC | 1 cut(s) | 121 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 82 |
| BstV2I | GAAGAC | 1 cut(s) | 57 |
| BsuRI | GGCC | 1 cut(s) | 221 |
| BtsCI | GGATG | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 1 cut(s) | 44 |
| CviJI | RGCY | 3 cut(s) | 41, 221, 236 |
| CviKI_1 | RGCY | 3 cut(s) | 41, 221, 236 |
| DdeI | CTNAG | 1 cut(s) | 6 |
| DpnI | GATC | 1 cut(s) | 123 |
| DpnII | GATC | 1 cut(s) | 121 |
| DriI | GACNNNNNGTC | 1 cut(s) | 61 |
| Eam1104I | CTCTTC | 1 cut(s) | 139 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 61 |
| EarI | CTCTTC | 1 cut(s) | 139 |
| Eco130I | CCWWGG | 1 cut(s) | 48 |
| Eco147I | AGGCCT | 1 cut(s) | 221 |
| Eco47I | GGWCC | 1 cut(s) | 44 |
| EcoT14I | CCWWGG | 1 cut(s) | 48 |
| ErhI | CCWWGG | 1 cut(s) | 48 |
| FaiI | YATR | 4 cut(s) | 151, 153, 155, 233 |
| FaqI | GGGAC | 1 cut(s) | 30 |
| FbaI | TGATCA | 1 cut(s) | 121 |
| FokI | GGATG | 1 cut(s) | 179 |
| HaeIII | GGCC | 1 cut(s) | 221 |
| HinfI | GANTC | 1 cut(s) | 159 |
| HphI | GGTGA | 1 cut(s) | 65 |
| Hpy188III | TCNNGA | 1 cut(s) | 97 |
| HpyAV | CCTTC | 1 cut(s) | 211 |
| HpyCH4V | TGCA | 1 cut(s) | 20 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 82 |
| HpyF3I | CTNAG | 1 cut(s) | 6 |
| Ksp22I | TGATCA | 1 cut(s) | 121 |
| Kzo9I | GATC | 1 cut(s) | 121 |
| LguI | GCTCTTC | 1 cut(s) | 139 |
| LpnPI | CCDG | 1 cut(s) | 27 |
| LweI | GCATC | 1 cut(s) | 7 |
| MaeIII | GTNAC | 1 cut(s) | 53 |
| MalI | GATC | 1 cut(s) | 123 |
| MboI | GATC | 1 cut(s) | 121 |
| MboII | GAAGA | 2 cut(s) | 57, 156 |
| MnlI | CCTC | 4 cut(s) | 75, 157, 194, 211 |
| MspA1I | CMGCKG | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 82 |
| NdeII | GATC | 1 cut(s) | 121 |
| NlaIV | GGNNCC | 1 cut(s) | 46 |
| NmuCI | GTSAC | 1 cut(s) | 53 |
| PceI | AGGCCT | 1 cut(s) | 221 |
| PciSI | GCTCTTC | 1 cut(s) | 139 |
| PfeI | GAWTC | 1 cut(s) | 159 |
| PspN4I | GGNNCC | 1 cut(s) | 46 |
| PspPI | GGNCC | 1 cut(s) | 44 |
| PvuII | CAGCTG | 1 cut(s) | 41 |
| SapI | GCTCTTC | 1 cut(s) | 139 |
| Sau3AI | GATC | 1 cut(s) | 121 |
| Sau96I | GGNCC | 1 cut(s) | 44 |
| SetI | ASST | 2 cut(s) | 43, 186 |
| SfaNI | GCATC | 1 cut(s) | 7 |
| SgeI | CNNG | 9 cut(s) | 54, 61, 73, 81, 109, 148, 175, 185, 209 |
| SinI | GGWCC | 1 cut(s) | 44 |
| SseBI | AGGCCT | 1 cut(s) | 221 |
| StuI | AGGCCT | 1 cut(s) | 221 |
| StyI | CCWWGG | 1 cut(s) | 48 |
| TaqI | TCGA | 1 cut(s) | 162 |
| TfiI | GAWTC | 1 cut(s) | 159 |
| TseFI | GTSAC | 1 cut(s) | 53 |
| Tsp45I | GTSAC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 1 cut(s) | 199 |
| VpaK11BI | GGWCC | 1 cut(s) | 44 |