Rh4CG418600

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0008208
Physical Location & Seq
Forward (+)
66329559 .. 66331604
2046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG418600.1

Sequence Viewer

Length: 1026 bp
ATGCAGCTTTTATCCTTCCGACGTCAGTTCATGATCCTCACGGCTTGTCTCTCACTTTGTTTGGTTGCTAAAGCTGAGTTTCAACGTTTGCAACAGCAAACAAACGACGAAGGGTCTCTGAAATTCTTCGTTGTTGGAGATTGGGGCAGACGAGGACTCTACAACCAATCTCAAGTTGCAGCCCAGATGGGATTAATCGCGAACAAAGAAAACATAGACATTGTTTTCTCCACCGGTGACAATTTCTACGACGATGGTTTGAAAGGCGTTTATGATCCAGCTTTTAAAGAATCATTCTCCAACATCTACAATGCCCAAAGCTTAAAGAAACCATATTGGTTCAGTGTATTGGGTAACCATGACTATCGTGGTAACGTTCTAGCACAACTGAATCCACTCCTCAAACGCATTGACAGTAGATGGTTTTGCTATAGATCATTCCATATCGGTTATGCAGATTTCGTAGAGATTTTCTCTGTGGACACAACCCCATTTGTAGATGAGTACTTCACGGATCCAAAGGAGCATGTCTATGACTGGAGAGGTGTGCTTCCTCGGGAGGATTACCTTTCAAATGTCTTGAAGGGTCTGGATCATGCACTGGAAAATTCCTCTGCAAAATGGAAAATTGTGATCGGTCACCATACAATTAGAAGTGCAGGACATCATGGTAACACCGCTGAGCTTGTAACCAAACTTCTCCCAATCCGTAAGGCAAACAATATAGATTTTTATATAAACGGACATGACCATTGCTTGCAGCACATCAGTGATACTGACAGATACTGCAGTAAAATTGAGTTTTTTACCAGTGGAGGTGGCTCCAAGGCATGGAGAGGTGATATAGATCCCTGGGATCCAAGAGAATTGAAGCTGTACTACGACGGCCAAGGTTTTTTGTCGGCCAAAATAACTAAAACCAACGCTGATATACAATTTTACGATGTCTCTGGCAATGTTTTGCACAATTGGAGCAAATCCAAGGTCCTAGACTCGGTCACGCATAGAAAGTTTATCTATGCTTAA

Protein Analysis

341

Amino Acids

39.24

Weight (kDa)

7.21

Isoelectric Point (pI)

35.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 40 - 252 2.4e-16 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 25
AccB7I CCANNNNNTGG 1 cut(s) 831
AccII CGCG 1 cut(s) 200
AciI CCGC 1 cut(s) 678
AclI AACGTT 2 cut(s) 85, 375
AclWI GGATC 8 cut(s) 28, 269, 509, 522, 600, 842, 851, 864
AcoI YGGCCR 2 cut(s) 886, 903
AcsI RAATTY 2 cut(s) 122, 607
AcyI GRCGYC 1 cut(s) 22
AfaI GTAC 2 cut(s) 506, 878
AfiI CCNNNNNNNGG 2 cut(s) 831, 994
AgeI ACCGGT 1 cut(s) 233
AgsI TTSAA 5 cut(s) 83, 262, 573, 583, 871
AhdI GACNNNNNGTC 1 cut(s) 112
AjnI CCWGG 1 cut(s) 851
AleI CACNNNNGTG 1 cut(s) 768
AluBI AGCT 6 cut(s) 7, 74, 281, 321, 685, 874
AluI AGCT 6 cut(s) 7, 74, 281, 321, 685, 874
Alw26I GTCTC 3 cut(s) 53, 120, 952
AlwI GGATC 8 cut(s) 28, 269, 509, 522, 600, 842, 851, 864
AlwNI CAGNNNCTG 1 cut(s) 786
Ama87I CYCGRG 1 cut(s) 555
AoxI GGCC 2 cut(s) 886, 903
ApeKI GCWGC 3 cut(s) 4, 179, 760
ApoI RAATTY 2 cut(s) 122, 607
ArsI GACNNNNNNTTYG 2 cut(s) 969, 1001
AseI ATTAAT 1 cut(s) 194
AsiGI ACCGGT 1 cut(s) 233
Asp700I GAANNNNTTC 1 cut(s) 125
AspS9I GGNCC 1 cut(s) 985
AsuHPI GGTGA 3 cut(s) 248, 632, 851
AvaI CYCGRG 1 cut(s) 555
AvaII GGWCC 1 cut(s) 985
BaeI ACNNNNGTAYC 2 cut(s) 775, 808
BamHI GGATCC 2 cut(s) 514, 856
BarI GAAGNNNNNNTAC 4 cut(s) 681, 713, 863, 895
BbvI GCAGC 3 cut(s) 16, 191, 772
BccI CCATC 3 cut(s) 181, 248, 414
BceAI ACGGC 2 cut(s) 57, 901
BciT130I CCWGG 1 cut(s) 853
BcoDI GTCTC 3 cut(s) 53, 120, 952
BfaI CTAG 2 cut(s) 380, 989
BfmI CTRYAG 2 cut(s) 430, 787
BisI GCNGC 3 cut(s) 5, 180, 761
BlpI GCTNAGC 1 cut(s) 681
BlsI GCNGC 3 cut(s) 6, 181, 762
BmcAI AGTACT 1 cut(s) 506
Bme1390I CCNGG 1 cut(s) 853
Bme18I GGWCC 1 cut(s) 985
BmeRI GACNNNNNGTC 1 cut(s) 112
BmeT110I CYCGRG 1 cut(s) 555
BmgT120I GGNCC 1 cut(s) 985
BmiI GGNNCC 3 cut(s) 516, 823, 858
BmrFI CCNGG 1 cut(s) 853
BplI GAGNNNNNCTC 2 cut(s) 458, 490
BpmI CTGGAG 1 cut(s) 559
Bpu1102I GCTNAGC 1 cut(s) 681
BpuEI CTTGAG 1 cut(s) 156
BsaBI GATNNNNATC 1 cut(s) 846
BsaHI GRCGYC 1 cut(s) 22
BsaI GGTCTC 1 cut(s) 120
BsaJI CCNNGG 6 cut(s) 554, 825, 851, 852, 889, 981
BsaWI WCCGGW 1 cut(s) 233
Bsc4I CCNNNNNNNGG 2 cut(s) 831, 994
Bse118I RCCGGY 1 cut(s) 233
Bse1I ACTGG 3 cut(s) 542, 606, 810
Bse3DI GCAATG 2 cut(s) 751, 961
Bse8I GATNNNNATC 1 cut(s) 846
BseBI CCWGG 1 cut(s) 853
BseDI CCNNGG 6 cut(s) 554, 825, 851, 852, 889, 981
BseJI GATNNNNATC 1 cut(s) 846
BseLI CCNNNNNNNGG 2 cut(s) 831, 994
BseMI GCAATG 2 cut(s) 751, 961
BseMII CTCAG 2 cut(s) 66, 672
BseNI ACTGG 3 cut(s) 542, 606, 810
BseRI GAGGAG 1 cut(s) 389
BseXI GCAGC 3 cut(s) 16, 191, 772
BsgI GTGCAG 1 cut(s) 678
Bsh1236I CGCG 1 cut(s) 200
BshFI GGCC 2 cut(s) 888, 905
BshTI ACCGGT 1 cut(s) 233
BsiHKCI CYCGRG 1 cut(s) 555
BsiSI CCGG 1 cut(s) 234
BslI CCNNNNNNNGG 2 cut(s) 831, 994
BsmAI GTCTC 3 cut(s) 53, 120, 952
BsnI GGCC 2 cut(s) 888, 905
Bso31I GGTCTC 1 cut(s) 120
BsoBI CYCGRG 1 cut(s) 555
Bsp143I GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
Bsp1720I GCTNAGC 1 cut(s) 681
Bsp68I TCGCGA 1 cut(s) 200
BspACI CCGC 1 cut(s) 678
BspANI GGCC 2 cut(s) 888, 905
BspCNI CTCAG 2 cut(s) 67, 673
BspFNI CGCG 1 cut(s) 200
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 3 cut(s) 516, 823, 858
BspMAI CTGCAG 1 cut(s) 791
BspPI GGATC 8 cut(s) 28, 269, 509, 522, 600, 842, 851, 864
BspTNI GGTCTC 1 cut(s) 120
BsrDI GCAATG 2 cut(s) 751, 961
BsrFI RCCGGY 1 cut(s) 233
BsrI ACTGG 3 cut(s) 542, 606, 810
BssAI RCCGGY 1 cut(s) 233
BssECI CCNNGG 6 cut(s) 554, 825, 851, 852, 889, 981
BssMI GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
BssNI GRCGYC 1 cut(s) 22
BssT1I CCWWGG 3 cut(s) 825, 889, 981
Bst2UI CCWGG 1 cut(s) 853
Bst4CI ACNGT 1 cut(s) 416
BstACI GRCGYC 1 cut(s) 22
BstC8I GCNNGC 1 cut(s) 758
BstDEI CTNAG 2 cut(s) 75, 681
BstEII GGTNACC 2 cut(s) 353, 638
BstFNI CGCG 1 cut(s) 200
BstKTI GATC 8 cut(s) 36, 277, 437, 517, 595, 636, 850, 859
BstMAI GTCTC 3 cut(s) 53, 120, 952
BstMBI GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
BstNI CCWGG 1 cut(s) 853
BstNSI RCATGY 1 cut(s) 530
BstPI GGTNACC 2 cut(s) 353, 638
BstSCI CCNGG 1 cut(s) 851
BstSFI CTRYAG 2 cut(s) 430, 787
BstUI CGCG 1 cut(s) 200
BstV1I GCAGC 3 cut(s) 16, 191, 772
BstX2I RGATCY 3 cut(s) 514, 847, 856
BstYI RGATCY 3 cut(s) 514, 847, 856
BsuRI GGCC 2 cut(s) 888, 905
BtsIMutI CAGTG 4 cut(s) 349, 599, 775, 817
BtuMI TCGCGA 1 cut(s) 200
Cac8I GCNNGC 1 cut(s) 758
CaiI CAGNNNCTG 1 cut(s) 786
CciI TCATGA 1 cut(s) 30
Cfr10I RCCGGY 1 cut(s) 233
Cfr13I GGNCC 1 cut(s) 985
Csp6I GTAC 2 cut(s) 505, 877
CspAI ACCGGT 1 cut(s) 233
CviAII CATG 7 cut(s) 31, 359, 527, 596, 668, 746, 831
CviQI GTAC 2 cut(s) 505, 877
DdeI CTNAG 2 cut(s) 75, 681
DpnI GATC 8 cut(s) 35, 276, 436, 516, 594, 635, 849, 858
DpnII GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
DraI TTTAAA 1 cut(s) 286
DriI GACNNNNNGTC 1 cut(s) 112
EaeI YGGCCR 2 cut(s) 886, 903
Eam1105I GACNNNNNGTC 1 cut(s) 112
Eco130I CCWWGG 3 cut(s) 825, 889, 981
Eco31I GGTCTC 1 cut(s) 120
Eco47I GGWCC 1 cut(s) 985
Eco88I CYCGRG 1 cut(s) 555
Eco91I GGTNACC 2 cut(s) 353, 638
EcoO109I RGGNCCY 1 cut(s) 985
EcoO65I GGTNACC 2 cut(s) 353, 638
EcoRII CCWGG 1 cut(s) 851
EcoT14I CCWWGG 3 cut(s) 825, 889, 981
ErhI CCWWGG 3 cut(s) 825, 889, 981
FaeI CATG 7 cut(s) 34, 362, 530, 599, 671, 749, 834
FatI CATG 7 cut(s) 30, 358, 526, 595, 667, 745, 830
Fnu4HI GCNGC 3 cut(s) 5, 180, 761
Fsp4HI GCNGC 3 cut(s) 5, 180, 761
FspBI CTAG 2 cut(s) 380, 989
GluI GCNGC 3 cut(s) 5, 180, 761
GsuI CTGGAG 1 cut(s) 559
HaeIII GGCC 2 cut(s) 888, 905
HapII CCGG 1 cut(s) 234
Hin1I GRCGYC 1 cut(s) 22
Hin1II CATG 7 cut(s) 34, 362, 530, 599, 671, 749, 834
HindIII AAGCTT 1 cut(s) 319
HinfI GANTC 4 cut(s) 156, 290, 391, 992
HpaII CCGG 1 cut(s) 234
HphI GGTGA 3 cut(s) 248, 632, 851
Hpy166II GTNNAC 1 cut(s) 481
Hpy188I TCNGA 2 cut(s) 20, 120
Hpy188III TCNNGA 5 cut(s) 31, 199, 557, 580, 590
Hpy8I GTNNAC 1 cut(s) 481
Hpy99I CGWCG 4 cut(s) 24, 110, 254, 887
HpyAV CCTTC 3 cut(s) 25, 104, 577
HpyCH4III ACNGT 1 cut(s) 416
HpyCH4IV ACGT 3 cut(s) 22, 85, 375
HpyF3I CTNAG 2 cut(s) 75, 681
HpySE526I ACGT 3 cut(s) 22, 85, 375
Hsp92I GRCGYC 1 cut(s) 22
Hsp92II CATG 7 cut(s) 34, 362, 530, 599, 671, 749, 834
Kzo9I GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
LmnI GCTCC 3 cut(s) 523, 827, 972
Lsp1109I GCAGC 3 cut(s) 16, 191, 772
MaeI CTAG 2 cut(s) 380, 989
MaeII ACGT 3 cut(s) 22, 85, 375
MaeIII GTNAC 7 cut(s) 236, 353, 371, 638, 671, 688, 997
MalI GATC 8 cut(s) 35, 276, 436, 516, 594, 635, 849, 858
MboI GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
MboII GAAGA 1 cut(s) 118
MfeI CAATTG 1 cut(s) 967
MflI RGATCY 3 cut(s) 514, 847, 856
MluCI AATT 9 cut(s) 122, 241, 607, 627, 648, 795, 866, 935, 967
MlyI GAGTC 2 cut(s) 150, 986
MmeI TCCRAC 3 cut(s) 43, 115, 324
MnlI CCTC 9 cut(s) 47, 146, 410, 536, 553, 564, 622, 809, 830
MroXI GAANNNNTTC 1 cut(s) 125
MseI TTAA 4 cut(s) 194, 285, 323, 1024
MslI CAYNNNNRTG 2 cut(s) 531, 768
MspA1I CMGCKG 1 cut(s) 680
MspI CCGG 1 cut(s) 234
MspR9I CCNGG 1 cut(s) 853
MunI CAATTG 1 cut(s) 967
MvaI CCWGG 1 cut(s) 853
MvnI CGCG 1 cut(s) 200
NdeII GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
NlaIII CATG 7 cut(s) 34, 362, 530, 599, 671, 749, 834
NlaIV GGNNCC 3 cut(s) 516, 823, 858
NmuCI GTSAC 3 cut(s) 236, 638, 997
NruI TCGCGA 1 cut(s) 200
NspI RCATGY 1 cut(s) 530
OliI CACNNNNGTG 1 cut(s) 768
PagI TCATGA 1 cut(s) 30
PasI CCCWGGG 1 cut(s) 852
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 2 cut(s) 290, 391
PflFI GACNNNGTC 1 cut(s) 995
PflMI CCANNNNNTGG 1 cut(s) 831
PinAI ACCGGT 1 cut(s) 233
PkrI GCNGC 3 cut(s) 6, 181, 762
PleI GAGTC 2 cut(s) 150, 986
PpsI GAGTC 2 cut(s) 150, 986
PpuMI RGGWCCY 1 cut(s) 985
PshBI ATTAAT 1 cut(s) 194
Psp1406I AACGTT 2 cut(s) 85, 375
Psp5II RGGWCCY 1 cut(s) 985
Psp6I CCWGG 1 cut(s) 851
PspEI GGTNACC 2 cut(s) 353, 638
PspGI CCWGG 1 cut(s) 851
PspN4I GGNNCC 3 cut(s) 516, 823, 858
PspPI GGNCC 1 cut(s) 985
PspPPI RGGWCCY 1 cut(s) 985
PstI CTGCAG 1 cut(s) 791
PstNI CAGNNNCTG 1 cut(s) 786
PsuI RGATCY 3 cut(s) 514, 847, 856
PsyI GACNNNGTC 1 cut(s) 995
RruI TCGCGA 1 cut(s) 200
RsaI GTAC 2 cut(s) 506, 878
RsaNI GTAC 2 cut(s) 505, 877
RseI CAYNNNNRTG 2 cut(s) 531, 768
SaqAI TTAA 4 cut(s) 194, 285, 323, 1024
SatI GCNGC 3 cut(s) 5, 180, 761
Sau3AI GATC 8 cut(s) 33, 274, 434, 514, 592, 633, 847, 856
Sau96I GGNCC 1 cut(s) 985
ScaI AGTACT 1 cut(s) 506
SchI GAGTC 2 cut(s) 150, 986
ScrFI CCNGG 1 cut(s) 853
SfcI CTRYAG 2 cut(s) 430, 787
SgrAI CRCCGGYG 1 cut(s) 233
SinI GGWCC 1 cut(s) 985
SmiMI CAYNNNNRTG 2 cut(s) 531, 768
SmlI CTYRAG 1 cut(s) 171
SmoI CTYRAG 1 cut(s) 171
Sse9I AATT 9 cut(s) 122, 241, 607, 627, 648, 795, 866, 935, 967
SsiI CCGC 1 cut(s) 678
SspMI CTAG 2 cut(s) 380, 989
StyD4I CCNGG 1 cut(s) 851
StyI CCWWGG 3 cut(s) 825, 889, 981
TaaI ACNGT 1 cut(s) 416
TaiI ACGT 3 cut(s) 25, 88, 378
TaqII GACCGA 2 cut(s) 626, 985
TasI AATT 9 cut(s) 122, 241, 607, 627, 648, 795, 866, 935, 967
TatI WGTACW 2 cut(s) 504, 876
TfiI GAWTC 2 cut(s) 290, 391
Tru1I TTAA 4 cut(s) 194, 285, 323, 1024
Tru9I TTAA 4 cut(s) 194, 285, 323, 1024
TscAI CASTG 4 cut(s) 349, 606, 775, 817
TseFI GTSAC 3 cut(s) 236, 638, 997
TseI GCWGC 3 cut(s) 4, 179, 760
Tsp45I GTSAC 3 cut(s) 236, 638, 997
TspDTI ATGAA 1 cut(s) 19
TspGWI ACGGA 3 cut(s) 527, 698, 756
TspRI CASTG 4 cut(s) 349, 606, 775, 817
Tth111I GACNNNGTC 1 cut(s) 995
Van91I CCANNNNNTGG 1 cut(s) 831
VpaK11BI GGWCC 1 cut(s) 985
VspI ATTAAT 1 cut(s) 194
XapI RAATTY 2 cut(s) 122, 607
XceI RCATGY 1 cut(s) 530
XcmI CCANNNNNNNNNTGG 1 cut(s) 365
XmnI GAANNNNTTC 1 cut(s) 125
XspI CTAG 2 cut(s) 380, 989
ZraI GACGTC 1 cut(s) 23
ZrmI AGTACT 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.