Rh5BG047300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
3791614 .. 3802602
10989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG047300.1

Sequence Viewer

Length: 216 bp
ATGGCAAGCACATTGGAGAACAAGGGTGCAAGACTGGAGGTTCTGTCTTTAGAACTACCAGCTCCTCCGGATTGGAGTAAGAAAGGTGAAAGTGAAAGGGCAAGCAAAGTGGAGAACAAGGGTGCAAAAATGGAAGTTCTGTCCTTGGTGGCTCCTCCGGGTTGGAGTAAGAAAGGTCGCAGGAAAAAAAGGCAAAGACCAAAGCCAACATCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

7.85

Weight (kDa)

10.4

Isoelectric Point (pI)

52.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 67
AluBI AGCT 1 cut(s) 62
AluI AGCT 1 cut(s) 62
Aor13HI TCCGGA 1 cut(s) 67
AsuC2I CCSGG 1 cut(s) 159
AsuHPI GGTGA 1 cut(s) 98
BcnI CCSGG 1 cut(s) 159
BfaI CTAG 1 cut(s) 214
Bme1390I CCNGG 1 cut(s) 159
BmiI GGNNCC 1 cut(s) 153
BmrFI CCNGG 1 cut(s) 159
BpmI CTGGAG 1 cut(s) 56
BpuMI CCSGG 1 cut(s) 159
BsaJI CCNNGG 1 cut(s) 144
BsaWI WCCGGW 1 cut(s) 67
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
Bse1I ACTGG 1 cut(s) 39
BseAI TCCGGA 1 cut(s) 67
BseDI CCNNGG 1 cut(s) 144
BseGI GGATG 1 cut(s) 209
BseNI ACTGG 1 cut(s) 39
BseRI GAGGAG 2 cut(s) 54, 144
BsiSI CCGG 2 cut(s) 68, 158
Bsp13I TCCGGA 1 cut(s) 67
BspEI TCCGGA 1 cut(s) 67
BspLI GGNNCC 1 cut(s) 153
BsrI ACTGG 1 cut(s) 39
BssECI CCNNGG 1 cut(s) 144
BssT1I CCWWGG 1 cut(s) 144
BstC8I GCNNGC 2 cut(s) 7, 103
BstF5I GGATG 1 cut(s) 209
BstSCI CCNGG 1 cut(s) 157
BtsCI GGATG 1 cut(s) 209
Cac8I GCNNGC 2 cut(s) 7, 103
CspCI CAANNNNNGTGG 2 cut(s) 90, 125
CviJI RGCY 3 cut(s) 62, 152, 205
CviKI_1 RGCY 3 cut(s) 62, 152, 205
Eco130I CCWWGG 1 cut(s) 144
EcoT14I CCWWGG 1 cut(s) 144
ErhI CCWWGG 1 cut(s) 144
FokI GGATG 1 cut(s) 196
FspBI CTAG 1 cut(s) 214
GsuI CTGGAG 1 cut(s) 56
HapII CCGG 2 cut(s) 68, 158
HpaII CCGG 2 cut(s) 68, 158
HphI GGTGA 1 cut(s) 98
Hpy188III TCNNGA 1 cut(s) 68
HpyCH4V TGCA 2 cut(s) 29, 125
Kpn2I TCCGGA 1 cut(s) 67
LmnI GCTCC 2 cut(s) 67, 157
LpnPI CCDG 5 cut(s) 20, 72, 81, 166, 171
MaeI CTAG 1 cut(s) 214
MmeI TCCRAC 1 cut(s) 143
MnlI CCTC 3 cut(s) 31, 75, 165
MroI TCCGGA 1 cut(s) 67
MspI CCGG 2 cut(s) 68, 158
MspR9I CCNGG 1 cut(s) 159
NciI CCSGG 1 cut(s) 159
NlaIV GGNNCC 1 cut(s) 153
PspN4I GGNNCC 1 cut(s) 153
ScrFI CCNGG 1 cut(s) 159
SetI ASST 4 cut(s) 42, 64, 88, 178
SspMI CTAG 1 cut(s) 214
StyD4I CCNGG 1 cut(s) 157
StyI CCWWGG 1 cut(s) 144
XspI CTAG 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.