Rh5BG132800

39S ribosomal protein L45

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
13144008 .. 13145496
1489 bp
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UTR
Exon/CDS
Intron
Rh5BG132800.1

Sequence Viewer

Length: 222 bp
ATGACGCTGCGTTCTGCAATGGCTGTCGAGTTGCCAATCTTCTTGAATGATAAAAGGTTGCTATCCACACAAGTAAAAGCACCTGCCCAAGCAAGGCAAATGGTTCTCAGCCAAAGCCAAAGGTTGCTGGTGTTGATTGGAATTTTAACAGTTGGGGAGATGGGTTCACAGTTCAAGGGTAAGATACTAGAAGATAACATGGCTGGCATTCTAAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

8.04

Weight (kDa)

10.16

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 91
Acc36I ACCTGC 1 cut(s) 91
AcsI RAATTY 1 cut(s) 141
AfiI CCNNNNNNNGG 1 cut(s) 93
AgsI TTSAA 2 cut(s) 46, 175
ApeKI GCWGC 1 cut(s) 7
ApoI RAATTY 1 cut(s) 141
BccI CCATC 1 cut(s) 154
BfaI CTAG 1 cut(s) 188
BfuAI ACCTGC 1 cut(s) 91
BisI GCNGC 1 cut(s) 8
BlsI GCNGC 1 cut(s) 9
Bsc4I CCNNNNNNNGG 1 cut(s) 93
Bse3DI GCAATG 1 cut(s) 24
BseLI CCNNNNNNNGG 1 cut(s) 93
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 121
BslI CCNNNNNNNGG 1 cut(s) 93
BsmI GAATGC 1 cut(s) 207
BspCNI CTCAG 1 cut(s) 120
BspMI ACCTGC 1 cut(s) 91
BsrDI GCAATG 1 cut(s) 24
Bst4CI ACNGT 2 cut(s) 151, 171
BstC8I GCNNGC 1 cut(s) 205
BstDEI CTNAG 1 cut(s) 107
BveI ACCTGC 1 cut(s) 91
Cac8I GCNNGC 1 cut(s) 205
CseI GACGC 1 cut(s) 13
CviAII CATG 1 cut(s) 199
CviJI RGCY 4 cut(s) 23, 111, 117, 203
CviKI_1 RGCY 4 cut(s) 23, 111, 117, 203
DdeI CTNAG 1 cut(s) 107
FaeI CATG 1 cut(s) 202
FaiI YATR 1 cut(s) 200
FatI CATG 1 cut(s) 198
Fnu4HI GCNGC 1 cut(s) 8
Fsp4HI GCNGC 1 cut(s) 8
FspBI CTAG 1 cut(s) 188
GluI GCNGC 1 cut(s) 8
HgaI GACGC 1 cut(s) 13
Hin1II CATG 1 cut(s) 202
Hpy166II GTNNAC 1 cut(s) 167
Hpy188III TCNNGA 1 cut(s) 43
Hpy8I GTNNAC 1 cut(s) 167
HpyCH4III ACNGT 2 cut(s) 151, 171
HpyCH4V TGCA 1 cut(s) 17
HpyF3I CTNAG 1 cut(s) 107
Hsp92II CATG 1 cut(s) 202
LpnPI CCDG 3 cut(s) 96, 113, 189
MaeI CTAG 1 cut(s) 188
MboII GAAGA 2 cut(s) 31, 203
MluCI AATT 1 cut(s) 141
MseI TTAA 1 cut(s) 146
Mva1269I GAATGC 1 cut(s) 207
NlaIII CATG 1 cut(s) 202
PaqCI CACCTGC 1 cut(s) 91
PctI GAATGC 1 cut(s) 207
PkrI GCNGC 1 cut(s) 9
SaqAI TTAA 1 cut(s) 146
SatI GCNGC 1 cut(s) 8
SetI ASST 3 cut(s) 59, 85, 125
Sse9I AATT 1 cut(s) 141
SspMI CTAG 1 cut(s) 188
TaaI ACNGT 2 cut(s) 151, 171
TaqI TCGA 1 cut(s) 27
TasI AATT 1 cut(s) 141
Tru1I TTAA 1 cut(s) 146
Tru9I TTAA 1 cut(s) 146
TseI GCWGC 1 cut(s) 7
XapI RAATTY 1 cut(s) 141
XspI CTAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.