39S ribosomal protein L45
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000030373 |
| rosa_multiflora | Rmu_sc0003880.1_g000025 Rmu_sc0006948.1_g000011 Rmu_sc0032105.1_g000001 |
| rosa_rugosa | Rorug01G0189900 Rorug01G0190000 Rorug01G0190100 Rorug06G0061300 Rorug06G0061400 |
| rosa_samantha | Rh1AG125400 Rh3BG351200 Rh3CG055900 Rh5AG334200 Rh5BG132800 Rh5DG508200 Rh6AG163600 Rh6BG167400 Rh6CG161200 Rh6DG152800 Rh6DG154100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 118 |
| Acc36I | ACCTGC | 1 cut(s) | 118 |
| AgsI | TTSAA | 4 cut(s) | 44, 73, 136, 321 |
| AhlI | ACTAGT | 1 cut(s) | 34 |
| AluBI | AGCT | 4 cut(s) | 17, 26, 176, 236 |
| AluI | AGCT | 4 cut(s) | 17, 26, 176, 236 |
| ApeKI | GCWGC | 1 cut(s) | 233 |
| BbvI | GCAGC | 1 cut(s) | 245 |
| BceAI | ACGGC | 1 cut(s) | 229 |
| BcuI | ACTAGT | 1 cut(s) | 34 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfuAI | ACCTGC | 1 cut(s) | 118 |
| BisI | GCNGC | 1 cut(s) | 234 |
| BlsI | GCNGC | 1 cut(s) | 235 |
| BpmI | CTGGAG | 1 cut(s) | 290 |
| BpuEI | CTTGAG | 1 cut(s) | 263 |
| BseGI | GGATG | 1 cut(s) | 160 |
| BseXI | GCAGC | 1 cut(s) | 245 |
| BslFI | GGGAC | 1 cut(s) | 237 |
| BsmFI | GGGAC | 1 cut(s) | 237 |
| BspMI | ACCTGC | 1 cut(s) | 118 |
| BstF5I | GGATG | 1 cut(s) | 160 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 23 |
| BstV1I | GCAGC | 1 cut(s) | 245 |
| BtsCI | GGATG | 1 cut(s) | 160 |
| BveI | ACCTGC | 1 cut(s) | 118 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 183, 218 |
| CviJI | RGCY | 7 cut(s) | 17, 26, 50, 146, 176, 236, 278 |
| CviKI_1 | RGCY | 7 cut(s) | 17, 26, 50, 146, 176, 236, 278 |
| Eco32I | GATATC | 2 cut(s) | 9, 328 |
| EcoRV | GATATC | 2 cut(s) | 9, 328 |
| FaiI | YATR | 2 cut(s) | 29, 187 |
| FaqI | GGGAC | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 1 cut(s) | 234 |
| FokI | GGATG | 1 cut(s) | 167 |
| Fsp4HI | GCNGC | 1 cut(s) | 234 |
| FspBI | CTAG | 1 cut(s) | 35 |
| GluI | GCNGC | 1 cut(s) | 234 |
| GsuI | CTGGAG | 1 cut(s) | 290 |
| HinfI | GANTC | 2 cut(s) | 248, 260 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 2 cut(s) | 20, 70 |
| HpyAV | CCTTC | 2 cut(s) | 152, 156 |
| HpyCH4V | TGCA | 2 cut(s) | 31, 305 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 23 |
| LmnI | GCTCC | 1 cut(s) | 173 |
| LpnPI | CCDG | 4 cut(s) | 27, 123, 128, 254 |
| Lsp1109I | GCAGC | 1 cut(s) | 245 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MboII | GAAGA | 1 cut(s) | 58 |
| MfeI | CAATTG | 2 cut(s) | 255, 300 |
| MluCI | AATT | 3 cut(s) | 39, 255, 300 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| MnlI | CCTC | 4 cut(s) | 223, 238, 265, 307 |
| MunI | CAATTG | 2 cut(s) | 255, 300 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 23 |
| PaqCI | CACCTGC | 1 cut(s) | 118 |
| PfeI | GAWTC | 1 cut(s) | 248 |
| PkrI | GCNGC | 1 cut(s) | 235 |
| PleI | GAGTC | 1 cut(s) | 268 |
| PpsI | GAGTC | 1 cut(s) | 268 |
| SatI | GCNGC | 1 cut(s) | 234 |
| SchI | GAGTC | 1 cut(s) | 269 |
| SetI | ASST | 9 cut(s) | 19, 28, 86, 112, 167, 178, 238, 276, 299 |
| SmlI | CTYRAG | 2 cut(s) | 18, 242 |
| SmoI | CTYRAG | 2 cut(s) | 18, 242 |
| SpeI | ACTAGT | 1 cut(s) | 34 |
| Sse9I | AATT | 3 cut(s) | 39, 255, 300 |
| SspMI | CTAG | 1 cut(s) | 35 |
| TaqI | TCGA | 1 cut(s) | 54 |
| TasI | AATT | 3 cut(s) | 39, 255, 300 |
| TfiI | GAWTC | 1 cut(s) | 248 |
| TseI | GCWGC | 1 cut(s) | 233 |
| TspDTI | ATGAA | 1 cut(s) | 171 |
| XspI | CTAG | 1 cut(s) | 35 |