DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0405541 |
| rosa_laevigata | RLG00000012603 RLG00000014250 RLG00000018184 RLG00000022599 RLG00000030134 RLG00000035091 RLG00000035371 |
| rosa_roxburghii | Rroxscaffold_2G00103110 Rroxscaffold_3G00244540 |
| rosa_rugosa | Rorug04G0102200 Rorug06G0229300 |
| rosa_samantha | Rh1BG178600 Rh2BG296500 Rh2CG274200 Rh2CG294400 Rh4DG256300 Rh5BG223800 Rh5BG277400 Rh6AG035400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 164 |
| AgsI | TTSAA | 4 cut(s) | 28, 94, 157, 169 |
| AluBI | AGCT | 1 cut(s) | 130 |
| AluI | AGCT | 1 cut(s) | 130 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| AsuHPI | GGTGA | 1 cut(s) | 59 |
| BceAI | ACGGC | 1 cut(s) | 132 |
| BsaJI | CCNNGG | 2 cut(s) | 139, 148 |
| BseDI | CCNNGG | 2 cut(s) | 139, 148 |
| BseMII | CTCAG | 1 cut(s) | 35 |
| BseRI | GAGGAG | 1 cut(s) | 54 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspCNI | CTCAG | 1 cut(s) | 36 |
| BssECI | CCNNGG | 2 cut(s) | 139, 148 |
| BssMI | GATC | 1 cut(s) | 3 |
| BssT1I | CCWWGG | 1 cut(s) | 139 |
| BstC8I | GCNNGC | 2 cut(s) | 115, 132 |
| BstDEI | CTNAG | 1 cut(s) | 44 |
| BstDSI | CCRYGG | 1 cut(s) | 148 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BtgI | CCRYGG | 1 cut(s) | 148 |
| Cac8I | GCNNGC | 2 cut(s) | 115, 132 |
| CviAII | CATG | 1 cut(s) | 32 |
| CviJI | RGCY | 3 cut(s) | 55, 113, 130 |
| CviKI_1 | RGCY | 3 cut(s) | 55, 113, 130 |
| DdeI | CTNAG | 1 cut(s) | 44 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 139 |
| EcoT14I | CCWWGG | 1 cut(s) | 139 |
| ErhI | CCWWGG | 1 cut(s) | 139 |
| FaeI | CATG | 1 cut(s) | 35 |
| FaiI | YATR | 1 cut(s) | 33 |
| FatI | CATG | 1 cut(s) | 31 |
| Hin1II | CATG | 1 cut(s) | 35 |
| HindIII | AAGCTT | 1 cut(s) | 128 |
| HinfI | GANTC | 1 cut(s) | 153 |
| HphI | GGTGA | 1 cut(s) | 59 |
| Hpy188I | TCNGA | 1 cut(s) | 45 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| HpyF3I | CTNAG | 1 cut(s) | 44 |
| Hsp92II | CATG | 1 cut(s) | 35 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LmnI | GCTCC | 2 cut(s) | 17, 67 |
| LpnPI | CCDG | 3 cut(s) | 72, 93, 127 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MluCI | AATT | 1 cut(s) | 164 |
| MnlI | CCTC | 1 cut(s) | 75 |
| MseI | TTAA | 2 cut(s) | 126, 181 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| NdeII | GATC | 1 cut(s) | 3 |
| NlaIII | CATG | 1 cut(s) | 35 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PfeI | GAWTC | 1 cut(s) | 153 |
| SaqAI | TTAA | 2 cut(s) | 126, 181 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| SetI | ASST | 3 cut(s) | 42, 132, 141 |
| Sse9I | AATT | 1 cut(s) | 164 |
| StyI | CCWWGG | 1 cut(s) | 139 |
| TasI | AATT | 1 cut(s) | 164 |
| TfiI | GAWTC | 1 cut(s) | 153 |
| Tru1I | TTAA | 2 cut(s) | 126, 181 |
| Tru9I | TTAA | 2 cut(s) | 126, 181 |
| TspGWI | ACGGA | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 164 |