Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0146011 |
| rosa_laevigata | RLG00000010267 |
| rosa_multiflora | Rmu_sc0022686.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00027380 Rroxscaffold_2G00110940 Rroxscaffold_2G00121620 Rroxscaffold_2G00143750 Rroxscaffold_3G00238040 Rroxscaffold_4G00298100 Rroxscaffold_4G00307350 Rroxscaffold_5G00337660 Rroxscaffold_5G00346680 Rroxscaffold_5G00364780 Rroxscaffold_5G00366680 Rroxscaffold_6G00406170 Rroxscaffold_7G00189440 |
| rosa_rugosa | Rorug01G0433400 Rorug03G0172600 Rorug03G0172700 Rorug03G0368000.1 |
| rosa_samantha | Rh1DG097800 Rh2BG125800 Rh2DG127800 Rh3BG286500 Rh5BG445000 Rh7CG204100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 18 |
| AclWI | GGATC | 2 cut(s) | 103, 260 |
| AcsI | RAATTY | 2 cut(s) | 142, 392 |
| AcuI | CTGAAG | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 305 |
| AflIII | ACRYGT | 1 cut(s) | 188 |
| AgsI | TTSAA | 3 cut(s) | 106, 305, 341 |
| AjiI | CACGTC | 1 cut(s) | 363 |
| Alw26I | GTCTC | 1 cut(s) | 369 |
| AlwI | GGATC | 2 cut(s) | 103, 260 |
| ApoI | RAATTY | 2 cut(s) | 142, 392 |
| BbsI | GAAGAC | 1 cut(s) | 296 |
| BccI | CCATC | 1 cut(s) | 187 |
| BcoDI | GTCTC | 1 cut(s) | 369 |
| BfaI | CTAG | 1 cut(s) | 224 |
| BfmI | CTRYAG | 1 cut(s) | 135 |
| BisI | GCNGC | 1 cut(s) | 18 |
| BlsI | GCNGC | 1 cut(s) | 19 |
| BmgBI | CACGTC | 1 cut(s) | 363 |
| BmrI | ACTGGG | 1 cut(s) | 293 |
| BmuI | ACTGGG | 1 cut(s) | 293 |
| BpiI | GAAGAC | 1 cut(s) | 296 |
| BsaJI | CCNNGG | 1 cut(s) | 159 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 305 |
| Bse1I | ACTGG | 1 cut(s) | 299 |
| BseDI | CCNNGG | 1 cut(s) | 159 |
| BseGI | GGATG | 1 cut(s) | 155 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 305 |
| BseMII | CTCAG | 1 cut(s) | 377 |
| BseNI | ACTGG | 1 cut(s) | 299 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 305 |
| BsmAI | GTCTC | 1 cut(s) | 369 |
| BsmBI | CGTCTC | 1 cut(s) | 369 |
| Bsp143I | GATC | 2 cut(s) | 95, 265 |
| BspACI | CCGC | 1 cut(s) | 18 |
| BspCNI | CTCAG | 1 cut(s) | 378 |
| BspPI | GGATC | 2 cut(s) | 103, 260 |
| BsrI | ACTGG | 1 cut(s) | 299 |
| BssECI | CCNNGG | 1 cut(s) | 159 |
| BssMI | GATC | 2 cut(s) | 95, 265 |
| BssT1I | CCWWGG | 1 cut(s) | 159 |
| Bst4CI | ACNGT | 1 cut(s) | 335 |
| BstC8I | GCNNGC | 1 cut(s) | 10 |
| BstDEI | CTNAG | 1 cut(s) | 386 |
| BstF5I | GGATG | 1 cut(s) | 155 |
| BstKTI | GATC | 2 cut(s) | 98, 268 |
| BstMAI | GTCTC | 1 cut(s) | 369 |
| BstMBI | GATC | 2 cut(s) | 95, 265 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstNSI | RCATGY | 1 cut(s) | 192 |
| BstSFI | CTRYAG | 1 cut(s) | 135 |
| BstV2I | GAAGAC | 1 cut(s) | 296 |
| BtrI | CACGTC | 1 cut(s) | 363 |
| BtsCI | GGATG | 1 cut(s) | 155 |
| BtsIMutI | CAGTG | 1 cut(s) | 331 |
| Cac8I | GCNNGC | 1 cut(s) | 10 |
| CviAII | CATG | 4 cut(s) | 189, 209, 286, 410 |
| CviJI | RGCY | 2 cut(s) | 8, 134 |
| CviKI_1 | RGCY | 2 cut(s) | 8, 134 |
| DdeI | CTNAG | 1 cut(s) | 386 |
| DpnI | GATC | 2 cut(s) | 97, 267 |
| DpnII | GATC | 2 cut(s) | 95, 265 |
| Eco130I | CCWWGG | 1 cut(s) | 159 |
| Eco57I | CTGAAG | 1 cut(s) | 101 |
| EcoT14I | CCWWGG | 1 cut(s) | 159 |
| ErhI | CCWWGG | 1 cut(s) | 159 |
| Esp3I | CGTCTC | 1 cut(s) | 369 |
| FaeI | CATG | 4 cut(s) | 192, 212, 289, 413 |
| FaiI | YATR | 6 cut(s) | 92, 190, 210, 218, 287, 411 |
| FatI | CATG | 4 cut(s) | 188, 208, 285, 409 |
| Fnu4HI | GCNGC | 1 cut(s) | 18 |
| FokI | GGATG | 1 cut(s) | 142 |
| Fsp4HI | GCNGC | 1 cut(s) | 18 |
| FspBI | CTAG | 1 cut(s) | 224 |
| GluI | GCNGC | 1 cut(s) | 18 |
| Hin1II | CATG | 4 cut(s) | 192, 212, 289, 413 |
| Hpy166II | GTNNAC | 1 cut(s) | 346 |
| Hpy188I | TCNGA | 1 cut(s) | 200 |
| Hpy188III | TCNNGA | 2 cut(s) | 263, 269 |
| Hpy8I | GTNNAC | 1 cut(s) | 346 |
| HpyAV | CCTTC | 1 cut(s) | 299 |
| HpyCH4III | ACNGT | 1 cut(s) | 335 |
| HpyCH4IV | ACGT | 1 cut(s) | 362 |
| HpyCH4V | TGCA | 3 cut(s) | 44, 87, 212 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| HpyF3I | CTNAG | 1 cut(s) | 386 |
| HpySE526I | ACGT | 1 cut(s) | 362 |
| Hsp92II | CATG | 4 cut(s) | 192, 212, 289, 413 |
| Kzo9I | GATC | 2 cut(s) | 95, 265 |
| MaeI | CTAG | 1 cut(s) | 224 |
| MaeII | ACGT | 1 cut(s) | 362 |
| MaeIII | GTNAC | 1 cut(s) | 54 |
| MalI | GATC | 2 cut(s) | 97, 267 |
| MboI | GATC | 2 cut(s) | 95, 265 |
| MboII | GAAGA | 2 cut(s) | 162, 301 |
| MluCI | AATT | 4 cut(s) | 99, 142, 255, 392 |
| MnlI | CCTC | 2 cut(s) | 220, 332 |
| MseI | TTAA | 2 cut(s) | 36, 396 |
| MslI | CAYNNNNRTG | 2 cut(s) | 187, 284 |
| MspA1I | CMGCKG | 1 cut(s) | 20 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NdeII | GATC | 2 cut(s) | 95, 265 |
| NlaIII | CATG | 4 cut(s) | 192, 212, 289, 413 |
| NspI | RCATGY | 1 cut(s) | 192 |
| PciI | ACATGT | 1 cut(s) | 188 |
| PkrI | GCNGC | 1 cut(s) | 19 |
| PscI | ACATGT | 1 cut(s) | 188 |
| RseI | CAYNNNNRTG | 2 cut(s) | 187, 284 |
| SaqAI | TTAA | 2 cut(s) | 36, 396 |
| SatI | GCNGC | 1 cut(s) | 18 |
| Sau3AI | GATC | 2 cut(s) | 95, 265 |
| SetI | ASST | 5 cut(s) | 165, 231, 284, 324, 365 |
| SfcI | CTRYAG | 1 cut(s) | 135 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 187, 284 |
| Sse9I | AATT | 4 cut(s) | 99, 142, 255, 392 |
| SsiI | CCGC | 1 cut(s) | 18 |
| SspMI | CTAG | 1 cut(s) | 224 |
| StyI | CCWWGG | 1 cut(s) | 159 |
| TaaI | ACNGT | 1 cut(s) | 335 |
| TaiI | ACGT | 1 cut(s) | 365 |
| TasI | AATT | 4 cut(s) | 99, 142, 255, 392 |
| TauI | GCSGC | 1 cut(s) | 20 |
| Tru1I | TTAA | 2 cut(s) | 36, 396 |
| Tru9I | TTAA | 2 cut(s) | 36, 396 |
| TscAI | CASTG | 1 cut(s) | 338 |
| TspDTI | ATGAA | 3 cut(s) | 162, 302, 392 |
| TspRI | CASTG | 1 cut(s) | 338 |
| XapI | RAATTY | 2 cut(s) | 142, 392 |
| XceI | RCATGY | 1 cut(s) | 192 |
| XspI | CTAG | 1 cut(s) | 224 |