Rh5CG531800

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0008180
Physical Location & Seq
Reverse (-)
74292824 .. 74296687
3864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG531800.1

Sequence Viewer

Length: 2667 bp
ATGGTGTTAGCTACAAGTACTATAATTCGCTTAGTTCTTGCAACTGGCATCACGTCATCTATCTTGAGCCCTGGCGTTCAAAAACTTGTGGATCTACTTGAAAGCAAGATAGGACGGATCCAAGAGACGGGCGACAAGCTCCGAAAATTGGAAAGAACATTGCTGAAAATTCAGTCTTTGGTCGATCAGGTAGAAGACAAGCACTCTACCTCAAACGCTTGTCGACTTTTAATTGAAGAGTTCAAGGGTGTTCTTCTTGATTCGGATGATTTATTCGATCAGATTCACCTCAAAATGCTAGAAGATAAAGCCAATGACCCGGCGAAGTTGGAACTGAGTATCAAGGATGATGTAGGTGAATGGCTTCAAAAAGCAGATAATTTGTCCCAAGAATTAGAGGCTTACTTCATCTCAGAAGTGACCAAGCCGCAGCCTCCTCAAATCGCTCATGGTAGTAGCTCGTTCGTCGATCCGTTGTCTGTGATTGGATTGGAAGAAAAAAAGAAAAATATAAAGTTGTTGCTGGCTGCTAAGGACAAGAATACTACTGTGATTTCAATAGTGGGTATGGCTGGCATCGGAAAAACAACACTTGCTCAACTTGTTTGTAATGATGCAGAGGTGGTTGAGCGGTTTAAAGAGAGAATATGGTGGGTATGTGTTTCCTGGGAGTATGATCTGATTCAGATCATTAAATCAATCCTCGAGGCTGCCACAAGCAGAGTCTGCACACTGTCAAATCTCGACTCTATTATGAGGAAATTGAAAAAGGTGATGGGGGAGGGGGAGGGGCAAGCGCAGGCGCAGGGGAAGGGGAAGTTTTTACTCGTGTTGGACGATATGTGGAATGAGAGTCCAAGTGATTGGGGTGCCTTGAAATTGCTTTTCAGCTTTGCAGCTCCTGGGAGTAGGGTACTGGTAACTACTCGAAGTACGACTGTTTCATCCATTGTTACCACTAATGGTGATTGTGGTTGTTTTGAGTTAACTACTTTGACCAAGGAGGATTGTTGGAAAATTATAAAGAAAAGGCTGAAAACAGAAGTTGAAAATGGTGAAGATTTGAAGGCTATTGGCTTAGAGTTAGCAAAGAAGTGTGAAGGTCTTCCTTTGGCGGCCAAAGTGATCGGAGATGCCTTGCATTTCAAATCAGAAAAGGTGGAGTGGGATGCGATGTTGAAATATGGTCTTTGGGACTTGCCAGGAGATAAGAACCAAGTCTATCGCGTACTGAAGCCGAGCTATGATCACTTGCCAGCTTATTTGACAAGATGCTTTGTTTATTTTTCTATAATCCCTCGAAGTAAAGAGGTCAAACGACTCAAAGTGGATGATTTGATCCAAATATGGGCAGCAGAAGGCTTCATTGGAACCCAAGGAGCAAGAAGAATTGAAGACATTGGAAGGGAGTACTTGAAAGAATTGTGTTCGAGGTCTTTAATTAAGACCTCGTCAGATGAGATTGAAATGCCTGGTTTCATTCATGACTTAGCAACGTTCGTTTCTACCAATTTATGCTTGCGTTTGGAGGATACTATGCCTGCAAGATCTACCAGCTTCTCTTCTCAAAATGTGCGTTATTTGTCATTGCTTTGTCAAAGTGATGAATCAGATGTGTGTGCAGCTAAGCTCGAAGAACTTCACTGGTATCAGAAATTGAGAACATTTATGTTGTTTTCCCAACCCCCTTCCAAGCTTTCTATGTCAGATAGCTTTCAAAAGTTGTTTGAGATATTCAAATGGTTAAGGGTTTTGAAGTTAACTGGTATTGGCATCCATAAGTTGTCTGGCCCCATCGACAAATTGAAACGCCTCCGCTACCTCGATCTAAGTGATACTAAGATTGCAAAGTTGCCACAGGAGATAGTAAATCTACTTGAGTTAGAAACACTTCAGCTCCAGAATTGTATTGAACTTAAAGATTGGCCTGAGAACTTTGAGAAGTTGGTTAAGCTGCGACACCTTCATAATGATAGACAGGGTCAAATGAGTTCCATGCCAAAAAACATCGGGAAATTAACTAGTCTCGAAATCCTGACAACTTTTGCAGTTGGAGGTGAAGAAGGATTTAAAATTGTGGAGCTTAAGAAGATGAACTGCCTTAGTGGATCCATTGAGATTACAAATCTCCAGAATGTGCCAGATGACATGAAGGCTGAAGATGTTATGTTATGCGAAAAGCAATACCTACACAAGGTGAAGTTGCATTGGGATGGAACAAGAGATATAGTTGAGCCTACAAGAATTCGTGATCAAGAAGTAATGAAGGGCCTTGAACCTAATTATAGGTTGAAAGAGTTGGAAATGAAAGGCTATTATGGTTCAAGATTGTCAGATTGGATTTACAACGACTTACCGTCTGTCAACACACCCACTCGTCAGATCGAGAAGCTTGTCCTTAGTTCTTGTCCAGAATTGTTAGAATTATCTTCACTTTCTCACCTGACTTCGCTTACAACATTAGAGATCCTCGAGTGCCCCAAGCTTACATCATTGCCAGTGAGAGGACTACTACCTAGCTCACTTGTGACTTTGAACATTTCAGAAAGTGGCATCTCAAGAGAGCAATGTGAGGACGGAGGCAGCATGCGGGAAACTGTCACATTTATTCTCGATGTACATATTAATGGTCACAAAATTCCAACGGAACGTTTGCCACGGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

888

Amino Acids

100.29

Weight (kDa)

6.13

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 22 - 104 3.2e-11 Rx N-terminal domain
NB-ARC PF00931 167 - 343 5.3e-28 NB-ARC domain
WHD_DRP PF23559 440 - 498 9.4e-14 Disease resistance protein Winged helix domain
LRR_14 PF23598 574 - 813 4e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 692 - 826 9.6e-27 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1022
AbsI CCTCGAGG 1 cut(s) 704
AccB1I GGYRCC 1 cut(s) 869
AccBSI CCGCTC 1 cut(s) 631
AccI GTMKAC 1 cut(s) 223
AccII CGCG 1 cut(s) 1227
AciI CCGC 5 cut(s) 428, 631, 1115, 1816, 2590
AclI AACGTT 2 cut(s) 1496, 2650
AclWI GGATC 8 cut(s) 99, 112, 125, 464, 1333, 2103, 2116, 2461
AcoI YGGCCR 1 cut(s) 1116
AcsI RAATTY 3 cut(s) 168, 2244, 2637
AcuI CTGAAG 3 cut(s) 1253, 1877, 2178
AdeI CACNNNGTG 1 cut(s) 2197
AfaI GTAC 6 cut(s) 19, 915, 934, 1230, 1412, 2619
AfiI CCNNNNNNNGG 5 cut(s) 127, 148, 1348, 2194, 2504
AflII CTTAAG 1 cut(s) 2084
AhdI GACNNNNNGTC 1 cut(s) 2356
AhlI ACTAGT 1 cut(s) 2021
AjiI CACGTC 1 cut(s) 54
AjnI CCWGG 5 cut(s) 70, 665, 901, 1201, 1471
AjuI GAANNNNNNNTTGG 2 cut(s) 1350, 1382
Alw26I GTCTC 2 cut(s) 119, 2030
AlwI GGATC 8 cut(s) 99, 112, 125, 464, 1333, 2103, 2116, 2461
AlwNI CAGNNNCTG 2 cut(s) 726, 902
Ama87I CYCGRG 2 cut(s) 704, 2471
AoxI GGCC 4 cut(s) 1116, 1789, 1925, 2269
ApeKI GCWGC 8 cut(s) 430, 527, 710, 896, 1352, 1622, 1954, 2583
ApoI RAATTY 3 cut(s) 168, 2244, 2637
AseI ATTAAT 1 cut(s) 2625
Asp700I GAANNNNTTC 4 cut(s) 363, 1104, 1638, 1890
AspLEI GCGC 2 cut(s) 799, 805
AspS9I GGNCC 2 cut(s) 1790, 2269
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 8 cut(s) 278, 368, 784, 977, 1067, 2069, 2209, 2432
AvaI CYCGRG 2 cut(s) 704, 2471
BaeGI GKGCMC 1 cut(s) 2480
BamHI GGATCC 2 cut(s) 117, 2108
BanI GGYRCC 1 cut(s) 869
BanII GRGCYC 1 cut(s) 71
BauI CACGAG 1 cut(s) 827
BbsI GAAGAC 3 cut(s) 201, 1097, 1401
BbvI GCAGC 8 cut(s) 442, 514, 697, 908, 1364, 1634, 1941, 2595
BccI CCATC 3 cut(s) 769, 1802, 2207
BciT130I CCWGG 5 cut(s) 72, 667, 903, 1203, 1473
BciVI GTATCC 1 cut(s) 1525
BclI TGATCA 2 cut(s) 1246, 2251
BcnI CCSGG 1 cut(s) 320
BcoDI GTCTC 2 cut(s) 119, 2030
BcuI ACTAGT 1 cut(s) 2021
BfaI CTAG 3 cut(s) 299, 2022, 2517
BfrI CTTAAG 1 cut(s) 2084
BfuI GTATCC 1 cut(s) 1525
BglII AGATCT 1 cut(s) 1547
BlpI GCTNAGC 1 cut(s) 1626
BmcAI AGTACT 2 cut(s) 19, 1412
Bme1390I CCNGG 6 cut(s) 72, 320, 667, 903, 1203, 1473
BmeRI GACNNNNNGTC 1 cut(s) 2356
BmeT110I CYCGRG 2 cut(s) 704, 2471
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 2 cut(s) 1790, 2269
BmiI GGNNCC 5 cut(s) 119, 871, 1372, 1792, 2110
BmrFI CCNGG 6 cut(s) 72, 320, 667, 903, 1203, 1473
BmsI GCATC 8 cut(s) 57, 585, 604, 1123, 1159, 1262, 1782, 2562
BpiI GAAGAC 3 cut(s) 201, 1097, 1401
BpmI CTGGAG 2 cut(s) 1883, 2114
Bpu10I CCTNAGC 1 cut(s) 531
Bpu1102I GCTNAGC 1 cut(s) 1626
BpuEI CTTGAG 3 cut(s) 85, 1898, 2542
BpuMI CCSGG 1 cut(s) 320
BsaBI GATNNNNATC 1 cut(s) 686
BsaJI CCNNGG 6 cut(s) 70, 666, 902, 999, 1375, 2657
BsaXI ACNNNNNCTCC 2 cut(s) 1881, 1911
Bsc4I CCNNNNNNNGG 5 cut(s) 127, 148, 1348, 2194, 2504
Bse1I ACTGG 5 cut(s) 49, 921, 1649, 1768, 2498
Bse3DI GCAATG 4 cut(s) 158, 1586, 2492, 2573
Bse8I GATNNNNATC 1 cut(s) 686
BseBI CCWGG 5 cut(s) 72, 667, 903, 1203, 1473
BseDI CCNNGG 6 cut(s) 70, 666, 902, 999, 1375, 2657
BseGI GGATG 7 cut(s) 271, 352, 944, 1174, 1336, 1773, 2218
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 5 cut(s) 127, 148, 1348, 2194, 2504
BseMI GCAATG 4 cut(s) 158, 1586, 2492, 2573
BseMII CTCAG 3 cut(s) 326, 426, 1920
BseNI ACTGG 5 cut(s) 49, 921, 1649, 1768, 2498
BseRI GAGGAG 1 cut(s) 426
BseSI GKGCMC 1 cut(s) 2480
BseXI GCAGC 8 cut(s) 442, 514, 697, 908, 1364, 1634, 1941, 2595
BsgI GTGCAG 2 cut(s) 712, 1641
Bsh1236I CGCG 1 cut(s) 1227
BshFI GGCC 4 cut(s) 1118, 1791, 1927, 2271
BshNI GGYRCC 1 cut(s) 869
BsiHKCI CYCGRG 2 cut(s) 704, 2471
BsiSI CCGG 1 cut(s) 320
BslFI GGGAC 2 cut(s) 370, 1208
BslI CCNNNNNNNGG 5 cut(s) 127, 148, 1348, 2194, 2504
BsmAI GTCTC 2 cut(s) 119, 2030
BsmBI CGTCTC 1 cut(s) 119
BsmFI GGGAC 2 cut(s) 370, 1208
BsnI GGCC 4 cut(s) 1118, 1791, 1927, 2271
BsoBI CYCGRG 2 cut(s) 704, 2471
Bsp1286I GDGCHC 2 cut(s) 71, 2480
Bsp1407I TGTACA 1 cut(s) 2617
Bsp1720I GCTNAGC 1 cut(s) 1626
BspACI CCGC 5 cut(s) 428, 631, 1115, 1816, 2590
BspANI GGCC 4 cut(s) 1118, 1791, 1927, 2271
BspCNI CTCAG 3 cut(s) 327, 425, 1921
BspFNI CGCG 1 cut(s) 1227
BspHI TCATGA 1 cut(s) 1483
BspLI GGNNCC 5 cut(s) 119, 871, 1372, 1792, 2110
BspPI GGATC 8 cut(s) 99, 112, 125, 464, 1333, 2103, 2116, 2461
BspT107I GGYRCC 1 cut(s) 869
BspTI CTTAAG 1 cut(s) 2084
BsrBI CCGCTC 1 cut(s) 631
BsrDI GCAATG 4 cut(s) 158, 1586, 2492, 2573
BsrGI TGTACA 1 cut(s) 2617
BsrI ACTGG 5 cut(s) 49, 921, 1649, 1768, 2498
BssECI CCNNGG 6 cut(s) 70, 666, 902, 999, 1375, 2657
BssSI CACGAG 1 cut(s) 827
BssT1I CCWWGG 2 cut(s) 999, 1375
Bst2BI CACGAG 1 cut(s) 827
Bst2UI CCWGG 5 cut(s) 72, 667, 903, 1203, 1473
Bst4CI ACNGT 5 cut(s) 550, 735, 940, 2358, 2599
Bst6I CTCTTC 2 cut(s) 231, 1567
BstAFI CTTAAG 1 cut(s) 2084
BstAPI GCANNNNNTGC 1 cut(s) 726
BstAUI TGTACA 1 cut(s) 2617
BstC8I GCNNGC 8 cut(s) 525, 574, 795, 801, 1257, 1520, 1542, 2588
BstDSI CCRYGG 1 cut(s) 2657
BstENI CCTNNNNNAGG 1 cut(s) 2192
BstF5I GGATG 7 cut(s) 271, 352, 944, 1174, 1336, 1773, 2218
BstFNI CGCG 1 cut(s) 1227
BstHHI GCGC 2 cut(s) 799, 805
BstMAI GTCTC 2 cut(s) 119, 2030
BstMWI GCNNNNNNNGC 1 cut(s) 726
BstNI CCWGG 5 cut(s) 72, 667, 903, 1203, 1473
BstNSI RCATGY 1 cut(s) 2590
BstSCI CCNGG 6 cut(s) 70, 318, 665, 901, 1201, 1471
BstSLI GKGCMC 1 cut(s) 2480
BstUI CGCG 1 cut(s) 1227
BstV1I GCAGC 8 cut(s) 442, 514, 697, 908, 1364, 1634, 1941, 2595
BstV2I GAAGAC 3 cut(s) 201, 1097, 1401
BstX2I RGATCY 5 cut(s) 91, 117, 1547, 2108, 2466
BstXI CCANNNNNNTGG 1 cut(s) 864
BstYI RGATCY 5 cut(s) 91, 117, 1547, 2108, 2466
BsuI GTATCC 1 cut(s) 1525
BsuRI GGCC 4 cut(s) 1118, 1791, 1927, 2271
BtgI CCRYGG 1 cut(s) 2657
BtgZI GCGATG 1 cut(s) 1187
BtrI CACGTC 1 cut(s) 54
BtsCI GGATG 7 cut(s) 271, 352, 944, 1174, 1336, 1773, 2218
BtsIMutI CAGTG 3 cut(s) 731, 1642, 2505
Cac8I GCNNGC 8 cut(s) 525, 574, 795, 801, 1257, 1520, 1542, 2588
CaiI CAGNNNCTG 2 cut(s) 726, 902
CciI TCATGA 1 cut(s) 1483
CfoI GCGC 2 cut(s) 799, 805
Cfr13I GGNCC 2 cut(s) 1790, 2269
Csp6I GTAC 6 cut(s) 18, 914, 933, 1229, 1411, 2618
CviAII CATG 5 cut(s) 449, 1484, 1996, 2149, 2587
CviQI GTAC 6 cut(s) 18, 914, 933, 1229, 1411, 2618
DraI TTTAAA 2 cut(s) 637, 2071
DraIII CACNNNGTG 1 cut(s) 2197
DriI GACNNNNNGTC 1 cut(s) 2356
EaeI YGGCCR 1 cut(s) 1116
Eam1104I CTCTTC 2 cut(s) 231, 1567
Eam1105I GACNNNNNGTC 1 cut(s) 2356
EarI CTCTTC 2 cut(s) 231, 1567
Eco130I CCWWGG 2 cut(s) 999, 1375
Eco24I GRGCYC 1 cut(s) 71
Eco57I CTGAAG 3 cut(s) 1253, 1877, 2178
Eco88I CYCGRG 2 cut(s) 704, 2471
EcoNI CCTNNNNNAGG 1 cut(s) 2192
EcoO109I RGGNCCY 1 cut(s) 2269
EcoRI GAATTC 1 cut(s) 2244
EcoRII CCWGG 5 cut(s) 70, 665, 901, 1201, 1471
EcoT14I CCWWGG 2 cut(s) 999, 1375
EcoT38I GRGCYC 1 cut(s) 71
ErhI CCWWGG 2 cut(s) 999, 1375
Esp3I CGTCTC 1 cut(s) 119
FaeI CATG 5 cut(s) 452, 1487, 1999, 2152, 2590
FaqI GGGAC 2 cut(s) 370, 1208
FatI CATG 5 cut(s) 448, 1483, 1995, 2148, 2586
FauI CCCGC 1 cut(s) 2583
FbaI TGATCA 2 cut(s) 1246, 2251
FblI GTMKAC 1 cut(s) 223
FokI GGATG 7 cut(s) 278, 359, 931, 1181, 1343, 1760, 2225
FriOI GRGCYC 1 cut(s) 71
FspBI CTAG 3 cut(s) 299, 2022, 2517
GlaI GCGC 2 cut(s) 798, 804
GsuI CTGGAG 2 cut(s) 1883, 2114
HaeIII GGCC 4 cut(s) 1118, 1791, 1927, 2271
HapII CCGG 1 cut(s) 320
HhaI GCGC 2 cut(s) 799, 805
Hin1II CATG 5 cut(s) 452, 1487, 1999, 2152, 2590
Hin6I GCGC 2 cut(s) 797, 803
HinP1I GCGC 2 cut(s) 797, 803
HincII GTYRAC 4 cut(s) 224, 987, 1761, 2365
HindII GTYRAC 4 cut(s) 224, 987, 1761, 2365
HindIII AAGCTT 3 cut(s) 1694, 2390, 2483
HinfI GANTC 8 cut(s) 260, 283, 682, 723, 746, 853, 1320, 1607
HpaI GTTAAC 2 cut(s) 987, 1761
HpaII CCGG 1 cut(s) 320
HphI GGTGA 8 cut(s) 278, 368, 784, 977, 1067, 2069, 2209, 2432
Hpy166II GTNNAC 4 cut(s) 224, 987, 1761, 2365
Hpy8I GTNNAC 4 cut(s) 224, 987, 1761, 2365
Hpy99I CGWCG 1 cut(s) 470
HpyCH4III ACNGT 5 cut(s) 550, 735, 940, 2358, 2599
HpyCH4IV ACGT 3 cut(s) 53, 1496, 2650
HpyF10VI GCNNNNNNNGC 1 cut(s) 726
HpySE526I ACGT 3 cut(s) 53, 1496, 2650
Hsp92II CATG 5 cut(s) 452, 1487, 1999, 2152, 2590
HspAI GCGC 2 cut(s) 797, 803
Ksp22I TGATCA 2 cut(s) 1246, 2251
KspAI GTTAAC 2 cut(s) 987, 1761
LmnI GCTCC 5 cut(s) 144, 904, 1379, 1902, 2080
Lsp1109I GCAGC 8 cut(s) 442, 514, 697, 908, 1364, 1634, 1941, 2595
LweI GCATC 8 cut(s) 57, 585, 604, 1123, 1159, 1262, 1782, 2562
MaeI CTAG 3 cut(s) 299, 2022, 2517
MaeII ACGT 3 cut(s) 53, 1496, 2650
MaeIII GTNAC 6 cut(s) 418, 919, 952, 2527, 2599, 2630
MbiI CCGCTC 1 cut(s) 631
MflI RGATCY 5 cut(s) 91, 117, 1547, 2108, 2466
MhlI GDGCHC 2 cut(s) 71, 2480
MlyI GAGTC 4 cut(s) 732, 740, 862, 1314
MmeI TCCRAC 6 cut(s) 309, 813, 992, 2032, 2280, 2666
MroXI GAANNNNTTC 4 cut(s) 363, 1104, 1638, 1890
MslI CAYNNNNRTG 3 cut(s) 2211, 2625, 2662
MspCI CTTAAG 1 cut(s) 2084
MspI CCGG 1 cut(s) 320
MspR9I CCNGG 6 cut(s) 72, 320, 667, 903, 1203, 1473
MvaI CCWGG 5 cut(s) 72, 667, 903, 1203, 1473
MvnI CGCG 1 cut(s) 1227
MwoI GCNNNNNNNGC 1 cut(s) 726
NciI CCSGG 1 cut(s) 320
NlaIII CATG 5 cut(s) 452, 1487, 1999, 2152, 2590
NlaIV GGNNCC 5 cut(s) 119, 871, 1372, 1792, 2110
NmeAIII GCCGAG 1 cut(s) 1263
NmuCI GTSAC 4 cut(s) 418, 2527, 2599, 2630
NspI RCATGY 1 cut(s) 2590
PacI TTAATTAA 1 cut(s) 1443
PaeI GCATGC 1 cut(s) 2590
PaeR7I CTCGAG 2 cut(s) 704, 2471
PagI TCATGA 1 cut(s) 1483
PcsI WCGNNNNNNNCGW 1 cut(s) 834
PdmI GAANNNNTTC 4 cut(s) 363, 1104, 1638, 1890
PfeI GAWTC 4 cut(s) 260, 283, 682, 1607
PflFI GACNNNGTC 2 cut(s) 1450, 1980
PleI GAGTC 4 cut(s) 731, 740, 861, 1314
PpsI GAGTC 4 cut(s) 731, 740, 861, 1314
PshBI ATTAAT 1 cut(s) 2625
PsiI TTATAA 1 cut(s) 1022
Psp1406I AACGTT 2 cut(s) 1496, 2650
Psp6I CCWGG 5 cut(s) 70, 665, 901, 1201, 1471
PspGI CCWGG 5 cut(s) 70, 665, 901, 1201, 1471
PspN4I GGNNCC 5 cut(s) 119, 871, 1372, 1792, 2110
PspPI GGNCC 2 cut(s) 1790, 2269
PspXI VCTCGAGB 2 cut(s) 704, 2471
PstNI CAGNNNCTG 2 cut(s) 726, 902
PsuI RGATCY 5 cut(s) 91, 117, 1547, 2108, 2466
PsyI GACNNNGTC 2 cut(s) 1450, 1980
RsaI GTAC 6 cut(s) 19, 915, 934, 1230, 1412, 2619
RsaNI GTAC 6 cut(s) 18, 914, 933, 1229, 1411, 2618
RseI CAYNNNNRTG 3 cut(s) 2211, 2625, 2662
SalI GTCGAC 1 cut(s) 222
Sau96I GGNCC 2 cut(s) 1790, 2269
ScaI AGTACT 2 cut(s) 19, 1412
SchI GAGTC 4 cut(s) 732, 740, 862, 1314
ScrFI CCNGG 6 cut(s) 72, 320, 667, 903, 1203, 1473
SduI GDGCHC 2 cut(s) 71, 2480
SfaNI GCATC 8 cut(s) 57, 585, 604, 1123, 1159, 1262, 1782, 2562
Sfr274I CTCGAG 2 cut(s) 704, 2471
SlaI CTCGAG 2 cut(s) 704, 2471
SmiMI CAYNNNNRTG 3 cut(s) 2211, 2625, 2662
SmlI CTYRAG 6 cut(s) 64, 704, 1877, 2084, 2471, 2557
SmoI CTYRAG 6 cut(s) 64, 704, 1877, 2084, 2471, 2557
SpeI ACTAGT 1 cut(s) 2021
SphI GCATGC 1 cut(s) 2590
SsiI CCGC 5 cut(s) 428, 631, 1115, 1816, 2590
SspMI CTAG 3 cut(s) 299, 2022, 2517
StyD4I CCNGG 6 cut(s) 70, 318, 665, 901, 1201, 1471
StyI CCWWGG 2 cut(s) 999, 1375
TaaI ACNGT 5 cut(s) 550, 735, 940, 2358, 2599
TaiI ACGT 3 cut(s) 56, 1499, 2653
TatI WGTACW 3 cut(s) 17, 1410, 2617
TauI GCSGC 2 cut(s) 430, 1118
TfiI GAWTC 4 cut(s) 260, 283, 682, 1607
TscAI CASTG 3 cut(s) 738, 1649, 2505
TseFI GTSAC 4 cut(s) 418, 2527, 2599, 2630
TseI GCWGC 8 cut(s) 430, 527, 710, 896, 1352, 1622, 1954, 2583
Tsp45I GTSAC 4 cut(s) 418, 2527, 2599, 2630
TspGWI ACGGA 4 cut(s) 130, 462, 2592, 2660
TspRI CASTG 3 cut(s) 738, 1649, 2505
Tth111I GACNNNGTC 2 cut(s) 1450, 1980
Vha464I CTTAAG 1 cut(s) 2084
VspI ATTAAT 1 cut(s) 2625
XagI CCTNNNNNAGG 1 cut(s) 2192
XapI RAATTY 3 cut(s) 168, 2244, 2637
XceI RCATGY 1 cut(s) 2590
XcmI CCANNNNNNNNNTGG 1 cut(s) 1784
XhoI CTCGAG 2 cut(s) 704, 2471
XmiI GTMKAC 1 cut(s) 223
XmnI GAANNNNTTC 4 cut(s) 363, 1104, 1638, 1890
XspI CTAG 3 cut(s) 299, 2022, 2517
ZrmI AGTACT 2 cut(s) 19, 1412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.