Rh6DG063800

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0008180
Physical Location & Seq
Forward (+)
6552547 .. 6557550
5004 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG063800.1

Sequence Viewer

Length: 2838 bp
ATGGCTTTAATATCTAATAACATCAACACCACGAGAGCAGTTATTAGTGTTTATCATTTCTCCCTTCATTATTCCACACTCCCACTTAGACCAATCGACGCAGGTCTGGATTTTGGGCTGGTTATTCAACTATTAGTTTTCTGGAAGAAAGGAAAACCCAGGAGCCAAAGATCCAAAGCTGGTCTTTATTTCCTTGCAGTGACAATGGGGGCTAGTACCATATTTGGTTTGGTTCTTTCGACCGGCATCACGTCGTCAGTTCTGCAGGTTGCTATTCAAGAGGTTGTAGATCTTGTTGGGAGGAAGATAGGACGGAATTCTGAGATTGACAACAAGCTTCGAAAGTTGAGAAAAACAGTGTTGAAGATTCAATCTCTGGTCGATGATGTAGAAGGCAAGCACTCTATTTCCAATGCTTGTCGACTTTTGATTGAAGACTGTGAGGGTGTTCTTCTTGATTCGCACGATTTACTGGATAAGATTGATCTGCAGTTGCGAAACTCTGGGGCTATTGACCCATCGTCTTTGGAGTCAAGTATCAAGGAGGAAGTAAGTCTGTTGCTGGAAAATGTTGTTGATTTTTTCAAAGAAATGGAGTGTTATTTCATCTCAGAGATAACCAAGCCGAGACCTCCTCAAACTTCAACTATTCCTCATGGCAGCTCGTTGGTTGATGAGTCGTGTGTAGTTGGAATGGGGAACAAAAAGGAGGAGTTCATTAAGCTGTTGCTGCGGAATGGTGATGAGAGTAACAGAGAACATGTTTCTGTGATCCCAATAGCGGGTATGGGTGGTATCGGAAAAACAACACTTGCTCAACTTGTTTATAATGATCCAAAAGTTGTTGAGAATTTTAAGTTGAGGATGTGGGTATGTGTTTCCTTGGACTATGATTTGGTCAAGATAAGTAAATCGATCTTCGAGTCTGCCACGAACAAAGTTTCGGAGTTGTCAAATTTCAATTGCCTCCAGATGCAGCTAAAAGAGGTCATGATGAAGGAGAAGTTTTTACTCGTACTAGATGACATGTGGAATGAGAATCCAAGCGACTGGGATGCCTTAAAATTGCTCTTCAGGTCTGCAGCACCGGGGAGCAGGGTTGTGGTAACTACTCGAAGTAAAACCGTTTCATCTATTGTAACAACTACTGGTGATGTTTGTTGTTTGCAAGAATCATCTGTTGCAGATTGTTGGGAAATTATCAAGCTAGGCTTGAGAACAAATATTGATAGTCGTGCAGATTTGAAAACGATTGGCTTAGAATTAGCACACAAGTGTAAGGGCCTTCCTTTGGCGGCCAAAGTAATTGGAGGTGTATTACGTCTCAAATCAAAAGAGATGGAGTGGGATGCCCTGCTAAAATGTGATCTTTGGGACTTGCCAGAAGAGAAGAACCAAGTATACCGGGTACTCAAGTTGAGCTATGACCATTTGCCAGCACATTTGAAAAGATGTTTTGTTTATTGTTCTATAATCCCTCGGAGTCAAAAAATCAAAGTGGAGGATTTGATCCAAATATGGGCAGCGGAAGGCTTCATCCAAGCCCAAGGAGCAAGAAGAATTGAAGACATTGGAAGGGAGTACTTTGATGAACTGTGTTCAAGGTGTCTTCTTCAAATTTCGCGTGATGATGAGGTTGAAATGCATGATTTCATTCACGACTTGGCAAGGTTAGTTTCTACCAACTTATGCTTGCATTTGGAGGATAATATGTCAAGATTCTTGCCTACGTCTGCAAATGTTCGCTATTTATCTCTGCTCTGTCAAGATACTCGCTTAGAGGTGTGGGCAGATAAACTCGTAGTGTGTTACAAGTATCCAAAATTGAGGACATTTATGTTGTTTCCCCATCTTAACCAAGTCCCTCGCAATCTTTTTGAGTTAGAAATCTTTGGAAAGTTGTTTGAAACATTCAAATGGTTAAGAGTTTTGAATTTGAGTCGTAGCGGCATCCGTACTGTATCTGACTTTATTGACAGATTCATACACCTTCGTTATCTCAACCTAAGCAATACCCCTATCACAAGACTGCCGGCAAGTATAGTAAATTTATCTGTGTTAGAAACGCTTCAGCTCAAGGAATGTCCTGTACTTAAAAGTTGGCCTGAGAACATGGAGAAATTGATTAAGCTACGTCACCTTCACTTTGATAGATATGGTCAAATGAGTTCCATGCCTCAAAATCTTGGGAAGCTGACTCGTCTAGAAACCCTGCATACTTTCACTGTGAAAAATGAAAAAGGATATGAAGTTGGGGAGCTTCAATCCTTGAACTGTCTTCGTGGATCCATTAGCATTAAAGATCTTGAGAATGTAGCAAATCTTCAAAAGGCTAAGGATGCCATGTTAGACAACAAACGATACCTAGACAAGTTGGAGTTGCATTGGGGTGTTACAAGAGTTCCAACAGGTAAAACAAAATTGCTTGATCAAAGTGTTCTCACGGGCCTTGAACCTCATGCTAGGTTGAAAGAGTTGAAAGTAGAAGGGTATCATGGTTCAGAACTGCCAAATTGGATATGCAAGCCATCGTCTGTCAACGCGCCCTCTCGTGAGATTGAGAAGTTTGTCATCGATTCTTGTCCAGAATTGGTCAACCTTCCTTCAATTCATCACCTAACTTCACTTCAAAAATTAGAGATCCACAGTTGCCCCAAGCTTCAATCACTGCCTGTAGGTGGACTACCTAGCTCACTCGAAAGTCTGAACATTTCAGGTAGTGGCATCTCAAAACAACAGTGTGAGGAGGGAGGTAGTGAGAGGGAAAATGTCAAATGTATTCCTGAAGTAGAAATTGATGATCAGCCTATTCCAACAGCGCCTTTTCCAATGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

945

Amino Acids

106.8

Weight (kDa)

7.07

Isoelectric Point (pI)

41.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 87 - 167 9.5e-08 Rx N-terminal domain
NB-ARC PF00931 237 - 402 5.9e-30 NB-ARC domain
WHD_DRP PF23559 491 - 556 2.8e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 635 - 846 2e-28 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 752 - 884 1.7e-30 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 828
Acc36I ACCTGC 2 cut(s) 92, 256
AccI GTMKAC 2 cut(s) 421, 1401
AccII CGCG 2 cut(s) 1624, 2543
AciI CCGC 5 cut(s) 733, 782, 1295, 1526, 1947
AclWI GGATC 7 cut(s) 165, 766, 827, 1504, 2280, 2293, 2635
AcoI YGGCCR 1 cut(s) 1296
AcsI RAATTY 6 cut(s) 316, 850, 955, 1617, 1933, 2047
AcuI CTGAAG 3 cut(s) 1057, 2054, 2805
AfaI GTAC 6 cut(s) 217, 1017, 1410, 1583, 1957, 2091
AfiI CCNNNNNNNGG 5 cut(s) 781, 782, 1291, 1519, 2678
AflIII ACRYGT 2 cut(s) 760, 1026
AhdI GACNNNNNGTC 1 cut(s) 520
AjiI CACGTC 1 cut(s) 252
AjnI CCWGG 1 cut(s) 158
AleI CACNNNNGTG 1 cut(s) 1273
Alw26I GTCTC 2 cut(s) 622, 1328
AlwI GGATC 7 cut(s) 165, 766, 827, 1504, 2280, 2293, 2635
AoxI GGCC 4 cut(s) 1282, 1296, 2102, 2446
ApeKI GCWGC 5 cut(s) 660, 730, 976, 1082, 1523
ApoI RAATTY 6 cut(s) 316, 850, 955, 1617, 1933, 2047
Asp700I GAANNNNTTC 1 cut(s) 2067
AspLEI GCGC 2 cut(s) 2545, 2821
AspS9I GGNCC 2 cut(s) 1282, 2446
AsuC2I CCSGG 2 cut(s) 1089, 1406
AsuHPI GGTGA 4 cut(s) 752, 1163, 2129, 2606
AsuII TTCGAA 1 cut(s) 340
BaeI ACNNNNGTAYC 2 cut(s) 1400, 1433
BamHI GGATCC 1 cut(s) 2285
BarI GAAGNNNNNNTAC 2 cut(s) 2307, 2339
BauI CACGAG 2 cut(s) 31, 2550
BbsI GAAGAC 4 cut(s) 441, 1572, 1601, 2270
BbvI GCAGC 5 cut(s) 672, 717, 988, 1094, 1535
BccI CCATC 4 cut(s) 526, 1333, 1857, 2536
BcgI CGANNNNNNTGC 2 cut(s) 1037, 1071
BciT130I CCWGG 1 cut(s) 160
BciVI GTATCC 1 cut(s) 1827
BclI TGATCA 2 cut(s) 2428, 2800
BcnI CCSGG 2 cut(s) 1089, 1406
BcoDI GTCTC 2 cut(s) 622, 1328
BfaI CTAG 7 cut(s) 213, 1019, 1208, 2204, 2366, 2463, 2688
BfmI CTRYAG 4 cut(s) 263, 488, 1080, 2673
BfoI RGCGCY 1 cut(s) 2822
BfuAI ACCTGC 2 cut(s) 92, 256
BfuI GTATCC 1 cut(s) 1827
BglII AGATCT 2 cut(s) 289, 2302
BisI GCNGC 7 cut(s) 661, 731, 977, 1083, 1296, 1524, 1948
BlsI GCNGC 7 cut(s) 662, 732, 978, 1084, 1297, 1525, 1949
BmcAI AGTACT 1 cut(s) 1583
Bme1390I CCNGG 3 cut(s) 160, 1089, 1406
BmeRI GACNNNNNGTC 1 cut(s) 520
BmgBI CACGTC 1 cut(s) 252
BmgT120I GGNCC 2 cut(s) 1282, 2446
BmiI GGNNCC 2 cut(s) 164, 2287
BmrFI CCNGG 3 cut(s) 160, 1089, 1406
BmrI ACTGGG 1 cut(s) 1060
BmsI GCATC 7 cut(s) 255, 963, 1045, 1339, 1959, 2329, 2733
BmuI ACTGGG 1 cut(s) 1060
BoxI GACNNNNGTC 1 cut(s) 102
BpiI GAAGAC 4 cut(s) 441, 1572, 1601, 2270
BplI GAGNNNNNCTC 2 cut(s) 619, 651
BpmI CTGGAG 1 cut(s) 953
Bpu10I CCTNAGC 2 cut(s) 2006, 2334
Bpu14I TTCGAA 1 cut(s) 340
BpuEI CTTGAG 4 cut(s) 1234, 1397, 2060, 2327
BpuMI CCSGG 2 cut(s) 1089, 1406
Bsa29I ATCGAT 2 cut(s) 914, 2574
BsaI GGTCTC 1 cut(s) 622
BsaJI CCNNGG 5 cut(s) 158, 882, 1088, 1478, 1546
Bsc4I CCNNNNNNNGG 5 cut(s) 781, 782, 1291, 1519, 2678
Bse118I RCCGGY 2 cut(s) 242, 2032
Bse1I ACTGG 3 cut(s) 477, 1055, 1153
BseBI CCWGG 1 cut(s) 160
BseCI ATCGAT 2 cut(s) 914, 2574
BseDI CCNNGG 5 cut(s) 158, 882, 1088, 1478, 1546
BseGI GGATG 6 cut(s) 870, 1060, 1354, 1536, 1950, 2344
BseLI CCNNNNNNNGG 5 cut(s) 781, 782, 1291, 1519, 2678
BseMII CTCAG 3 cut(s) 312, 624, 2097
BseNI ACTGG 3 cut(s) 477, 1055, 1153
BseRI GAGGAG 3 cut(s) 624, 725, 2759
BseXI GCAGC 5 cut(s) 672, 717, 988, 1094, 1535
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 2 cut(s) 1624, 2543
Bsh1285I CGRYCG 1 cut(s) 243
BshFI GGCC 4 cut(s) 1284, 1298, 2104, 2448
BshVI ATCGAT 2 cut(s) 914, 2574
BsiEI CGRYCG 1 cut(s) 243
BsiSI CCGG 4 cut(s) 243, 1088, 1405, 2033
BslFI GGGAC 2 cut(s) 1388, 1847
BslI CCNNNNNNNGG 5 cut(s) 781, 782, 1291, 1519, 2678
BsmAI GTCTC 2 cut(s) 622, 1328
BsmBI CGTCTC 1 cut(s) 1328
BsmFI GGGAC 2 cut(s) 1388, 1847
BsnI GGCC 4 cut(s) 1284, 1298, 2104, 2448
Bso31I GGTCTC 1 cut(s) 622
Bsp119I TTCGAA 1 cut(s) 340
BspACI CCGC 5 cut(s) 733, 782, 1295, 1526, 1947
BspANI GGCC 4 cut(s) 1284, 1298, 2104, 2448
BspCNI CTCAG 3 cut(s) 313, 623, 2098
BspDI ATCGAT 2 cut(s) 914, 2574
BspFNI CGCG 2 cut(s) 1624, 2543
BspHI TCATGA 1 cut(s) 990
BspLI GGNNCC 2 cut(s) 164, 2287
BspMAI CTGCAG 3 cut(s) 267, 492, 1084
BspMI ACCTGC 2 cut(s) 92, 256
BspPI GGATC 7 cut(s) 165, 766, 827, 1504, 2280, 2293, 2635
BspQI GCTCTTC 1 cut(s) 1076
BspT104I TTCGAA 1 cut(s) 340
BspTNI GGTCTC 1 cut(s) 622
BsrFI RCCGGY 2 cut(s) 242, 2032
BsrI ACTGG 3 cut(s) 477, 1055, 1153
BssAI RCCGGY 2 cut(s) 242, 2032
BssECI CCNNGG 5 cut(s) 158, 882, 1088, 1478, 1546
BssNAI GTATAC 1 cut(s) 1402
BssSI CACGAG 2 cut(s) 31, 2550
BssT1I CCWWGG 2 cut(s) 882, 1546
Bst1107I GTATAC 1 cut(s) 1402
Bst2BI CACGAG 2 cut(s) 31, 2550
Bst2UI CCWGG 1 cut(s) 160
Bst4CI ACNGT 9 cut(s) 358, 440, 1126, 1596, 1960, 2227, 2276, 2648, 2739
Bst6I CTCTTC 2 cut(s) 1076, 1380
BstBI TTCGAA 1 cut(s) 340
BstC8I GCNNGC 5 cut(s) 398, 1437, 1694, 2034, 2525
BstDEI CTNAG 8 cut(s) 86, 321, 610, 1258, 1777, 2006, 2106, 2334
BstF5I GGATG 6 cut(s) 870, 1060, 1354, 1536, 1950, 2344
BstFNI CGCG 2 cut(s) 1624, 2543
BstH2I RGCGCY 1 cut(s) 2822
BstHHI GCGC 2 cut(s) 2545, 2821
BstMAI GTCTC 2 cut(s) 622, 1328
BstMCI CGRYCG 1 cut(s) 243
BstMWI GCNNNNNNNGC 3 cut(s) 730, 1550, 2339
BstNI CCWGG 1 cut(s) 160
BstNSI RCATGY 2 cut(s) 764, 1030
BstPAI GACNNNNGTC 1 cut(s) 102
BstSCI CCNGG 3 cut(s) 158, 1087, 1404
BstSFI CTRYAG 4 cut(s) 263, 488, 1080, 2673
BstUI CGCG 2 cut(s) 1624, 2543
BstV1I GCAGC 5 cut(s) 672, 717, 988, 1094, 1535
BstV2I GAAGAC 4 cut(s) 441, 1572, 1601, 2270
BstX2I RGATCY 5 cut(s) 170, 289, 2285, 2302, 2640
BstXI CCANNNNNNTGG 1 cut(s) 1050
BstYI RGATCY 5 cut(s) 170, 289, 2285, 2302, 2640
BstZ17I GTATAC 1 cut(s) 1402
Bsu15I ATCGAT 2 cut(s) 914, 2574
BsuI GTATCC 1 cut(s) 1827
BsuRI GGCC 4 cut(s) 1284, 1298, 2104, 2448
BsuTUI ATCGAT 2 cut(s) 914, 2574
BtrI CACGTC 1 cut(s) 252
BtsCI GGATG 6 cut(s) 870, 1060, 1354, 1536, 1950, 2344
BtsI GCAGTG 2 cut(s) 204, 2666
BtsIMutI CAGTG 5 cut(s) 204, 363, 2223, 2666, 2744
BveI ACCTGC 2 cut(s) 92, 256
Cac8I GCNNGC 5 cut(s) 398, 1437, 1694, 2034, 2525
CciI TCATGA 1 cut(s) 990
CfoI GCGC 2 cut(s) 2545, 2821
Cfr10I RCCGGY 2 cut(s) 242, 2032
Cfr13I GGNCC 2 cut(s) 1282, 2446
ClaI ATCGAT 2 cut(s) 914, 2574
CseI GACGC 1 cut(s) 107
Csp6I GTAC 6 cut(s) 216, 1016, 1409, 1582, 1956, 2090
CviQI GTAC 6 cut(s) 216, 1016, 1409, 1582, 1956, 2090
DdeI CTNAG 8 cut(s) 86, 321, 610, 1258, 1777, 2006, 2106, 2334
DriI GACNNNNNGTC 1 cut(s) 520
EaeI YGGCCR 1 cut(s) 1296
Eam1104I CTCTTC 2 cut(s) 1076, 1380
Eam1105I GACNNNNNGTC 1 cut(s) 520
EarI CTCTTC 2 cut(s) 1076, 1380
Eco130I CCWWGG 2 cut(s) 882, 1546
Eco31I GGTCTC 1 cut(s) 622
Eco57I CTGAAG 3 cut(s) 1057, 2054, 2805
EcoO109I RGGNCCY 1 cut(s) 1282
EcoRI GAATTC 1 cut(s) 316
EcoRII CCWGG 1 cut(s) 158
EcoT14I CCWWGG 2 cut(s) 882, 1546
EcoT22I ATGCAT 1 cut(s) 1647
ErhI CCWWGG 2 cut(s) 882, 1546
Esp3I CGTCTC 1 cut(s) 1328
FalI AAGNNNNNCTT 4 cut(s) 168, 200, 1196, 1228
FaqI GGGAC 2 cut(s) 1388, 1847
FauI CCCGC 1 cut(s) 775
FbaI TGATCA 2 cut(s) 2428, 2800
FblI GTMKAC 2 cut(s) 421, 1401
Fnu4HI GCNGC 7 cut(s) 661, 731, 977, 1083, 1296, 1524, 1948
FokI GGATG 6 cut(s) 877, 1067, 1361, 1523, 1937, 2351
Fsp4HI GCNGC 7 cut(s) 661, 731, 977, 1083, 1296, 1524, 1948
FspBI CTAG 7 cut(s) 213, 1019, 1208, 2204, 2366, 2463, 2688
GlaI GCGC 2 cut(s) 2544, 2820
GluI GCNGC 7 cut(s) 661, 731, 977, 1083, 1296, 1524, 1948
GsuI CTGGAG 1 cut(s) 953
HaeII RGCGCY 1 cut(s) 2822
HaeIII GGCC 4 cut(s) 1284, 1298, 2104, 2448
HapII CCGG 4 cut(s) 243, 1088, 1405, 2033
HgaI GACGC 1 cut(s) 107
HhaI GCGC 2 cut(s) 2545, 2821
Hin6I GCGC 2 cut(s) 2543, 2819
HinP1I GCGC 2 cut(s) 2543, 2819
HincII GTYRAC 3 cut(s) 422, 2539, 2596
HindII GTYRAC 3 cut(s) 422, 2539, 2596
HindIII AAGCTT 2 cut(s) 335, 2657
HpaII CCGG 4 cut(s) 243, 1088, 1405, 2033
HphI GGTGA 4 cut(s) 752, 1163, 2129, 2606
Hpy166II GTNNAC 5 cut(s) 422, 1402, 2539, 2596, 2681
Hpy188I TCNGA 8 cut(s) 322, 613, 800, 946, 1482, 1966, 2503, 2706
Hpy8I GTNNAC 5 cut(s) 422, 1402, 2539, 2596, 2681
Hpy99I CGWCG 2 cut(s) 101, 256
HpyCH4III ACNGT 9 cut(s) 358, 440, 1126, 1596, 1960, 2227, 2276, 2648, 2739
HpyCH4IV ACGT 4 cut(s) 251, 1321, 1730, 2134
HpyF10VI GCNNNNNNNGC 3 cut(s) 730, 1550, 2339
HpyF3I CTNAG 8 cut(s) 86, 321, 610, 1258, 1777, 2006, 2106, 2334
HpySE526I ACGT 4 cut(s) 251, 1321, 1730, 2134
HspAI GCGC 2 cut(s) 2543, 2819
KroI GCCGGC 1 cut(s) 2032
KroNI GCCGGC 1 cut(s) 2034
Ksp22I TGATCA 2 cut(s) 2428, 2800
LguI GCTCTTC 1 cut(s) 1076
LmnI GCTCC 4 cut(s) 162, 1092, 1550, 2257
Lsp1109I GCAGC 5 cut(s) 672, 717, 988, 1094, 1535
LweI GCATC 7 cut(s) 255, 963, 1045, 1339, 1959, 2329, 2733
MaeI CTAG 7 cut(s) 213, 1019, 1208, 2204, 2366, 2463, 2688
MaeII ACGT 4 cut(s) 251, 1321, 1730, 2134
MaeIII GTNAC 7 cut(s) 199, 749, 1105, 1138, 1808, 2135, 2392
MfeI CAATTG 1 cut(s) 961
MflI RGATCY 5 cut(s) 170, 289, 2285, 2302, 2640
MlyI GAGTC 6 cut(s) 539, 686, 932, 1492, 1948, 2191
MmeI TCCRAC 4 cut(s) 670, 2355, 2429, 2837
Mph1103I ATGCAT 1 cut(s) 1647
MroNI GCCGGC 1 cut(s) 2032
MroXI GAANNNNTTC 1 cut(s) 2067
MseI TTAA 9 cut(s) 8, 720, 855, 1061, 1854, 1922, 2094, 2127, 2298
MslI CAYNNNNRTG 3 cut(s) 1273, 1915, 2388
MspA1I CMGCKG 1 cut(s) 1526
MspI CCGG 4 cut(s) 243, 1088, 1405, 2033
MspR9I CCNGG 3 cut(s) 160, 1089, 1406
MunI CAATTG 1 cut(s) 961
MvaI CCWGG 1 cut(s) 160
MvnI CGCG 2 cut(s) 1624, 2543
MwoI GCNNNNNNNGC 3 cut(s) 730, 1550, 2339
NaeI GCCGGC 1 cut(s) 2034
NciI CCSGG 2 cut(s) 1089, 1406
NgoMIV GCCGGC 1 cut(s) 2032
NlaIV GGNNCC 2 cut(s) 164, 2287
NmeAIII GCCGAG 1 cut(s) 651
NmuCI GTSAC 2 cut(s) 199, 2135
NsiI ATGCAT 1 cut(s) 1647
NspI RCATGY 2 cut(s) 764, 1030
NspV TTCGAA 1 cut(s) 340
OliI CACNNNNGTG 1 cut(s) 1273
PagI TCATGA 1 cut(s) 990
PciI ACATGT 2 cut(s) 760, 1026
PciSI GCTCTTC 1 cut(s) 1076
PdiI GCCGGC 1 cut(s) 2034
PdmI GAANNNNTTC 1 cut(s) 2067
PfeI GAWTC 7 cut(s) 367, 458, 1039, 1172, 1719, 1980, 2576
PkrI GCNGC 7 cut(s) 662, 732, 978, 1084, 1297, 1525, 1949
PleI GAGTC 6 cut(s) 538, 685, 931, 1491, 1947, 2191
PpsI GAGTC 6 cut(s) 538, 685, 931, 1491, 1947, 2191
PscI ACATGT 2 cut(s) 760, 1026
PshAI GACNNNNGTC 1 cut(s) 102
PsiI TTATAA 1 cut(s) 828
Psp6I CCWGG 1 cut(s) 158
PspGI CCWGG 1 cut(s) 158
PspN4I GGNNCC 2 cut(s) 164, 2287
PspPI GGNCC 2 cut(s) 1282, 2446
PsrI GAACNNNNNNTAC 2 cut(s) 1385, 1417
PstI CTGCAG 3 cut(s) 267, 492, 1084
PsuI RGATCY 5 cut(s) 170, 289, 2285, 2302, 2640
RsaI GTAC 6 cut(s) 217, 1017, 1410, 1583, 1957, 2091
RsaNI GTAC 6 cut(s) 216, 1016, 1409, 1582, 1956, 2090
RseI CAYNNNNRTG 3 cut(s) 1273, 1915, 2388
SalI GTCGAC 1 cut(s) 420
SapI GCTCTTC 1 cut(s) 1076
SaqAI TTAA 9 cut(s) 8, 720, 855, 1061, 1854, 1922, 2094, 2127, 2298
SatI GCNGC 7 cut(s) 661, 731, 977, 1083, 1296, 1524, 1948
Sau96I GGNCC 2 cut(s) 1282, 2446
ScaI AGTACT 1 cut(s) 1583
SchI GAGTC 6 cut(s) 539, 686, 932, 1492, 1948, 2191
ScrFI CCNGG 3 cut(s) 160, 1089, 1406
SfaNI GCATC 7 cut(s) 255, 963, 1045, 1339, 1959, 2329, 2733
SfcI CTRYAG 4 cut(s) 263, 488, 1080, 2673
SfuI TTCGAA 1 cut(s) 340
SmiMI CAYNNNNRTG 3 cut(s) 1273, 1915, 2388
SmlI CTYRAG 4 cut(s) 1213, 1412, 2075, 2306
SmoI CTYRAG 4 cut(s) 1213, 1412, 2075, 2306
SsiI CCGC 5 cut(s) 733, 782, 1295, 1526, 1947
SspI AATATT 1 cut(s) 1225
SspMI CTAG 7 cut(s) 213, 1019, 1208, 2204, 2366, 2463, 2688
StyD4I CCNGG 3 cut(s) 158, 1087, 1404
StyI CCWWGG 2 cut(s) 882, 1546
TaaI ACNGT 9 cut(s) 358, 440, 1126, 1596, 1960, 2227, 2276, 2648, 2739
TaiI ACGT 4 cut(s) 254, 1324, 1733, 2137
TatI WGTACW 2 cut(s) 1581, 2089
TauI GCSGC 2 cut(s) 1298, 1950
TfiI GAWTC 7 cut(s) 367, 458, 1039, 1172, 1719, 1980, 2576
Tru1I TTAA 9 cut(s) 8, 720, 855, 1061, 1854, 1922, 2094, 2127, 2298
Tru9I TTAA 9 cut(s) 8, 720, 855, 1061, 1854, 1922, 2094, 2127, 2298
TscAI CASTG 5 cut(s) 204, 363, 2230, 2673, 2744
TseFI GTSAC 2 cut(s) 199, 2135
TseI GCWGC 5 cut(s) 660, 730, 976, 1082, 1523
Tsp45I GTSAC 2 cut(s) 199, 2135
TspGWI ACGGA 2 cut(s) 328, 1943
TspRI CASTG 5 cut(s) 204, 363, 2230, 2673, 2744
XapI RAATTY 6 cut(s) 316, 850, 955, 1617, 1933, 2047
XbaI TCTAGA 1 cut(s) 2203
XceI RCATGY 2 cut(s) 764, 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 226
XmiI GTMKAC 2 cut(s) 421, 1401
XmnI GAANNNNTTC 1 cut(s) 2067
XspI CTAG 7 cut(s) 213, 1019, 1208, 2204, 2366, 2463, 2688
ZrmI AGTACT 1 cut(s) 1583
Zsp2I ATGCAT 1 cut(s) 1647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.